SPC Beche-De-Mer Information Bulletin
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Purification of Glucose 6-Phosphate Dehydrogenase From
MARINE SCIENCE AND TECHNOLOGY BULLETIN VOLUME: 9 ISSUE: 2 DECEMBER 2020 Editor-in-Chief Adem Yavuz Sönmez Kastamonu University, Turkey Co-Editor Semih Kale Çanakkale Onsekiz Mart University, Turkey Section Editors Soner Bilen Kastamonu University, Turkey Ertuğrul Terzi Kastamonu University, Turkey Ali Eslem Kadak Kastamonu University, Turkey Gökhan Arslan Atatürk University, Turkey Statistics Editor Aycan Mutlu Yağanoğlu Atatürk University, Turkey Foreign Language Editor Muhammet Sinan Alpsoy Kastamonu University, Turkey Editorial Board Agus Oman Sudrajat Institut Pertanian Bogor, Indonesia Anca Nicoleta Şuţan University of Piteşti, Romania Antanas Kontautas Klaipeda University, Lithuania Arya Vazirzadeh Shiraz University, Iran Barış Bayraklı Sinop University, Turkey Derya Güroy Yalova University, Turkey Fazıl Şen Yüzüncü Yıl University, Turkey Gouranga Biswas Kakdwip Research Centre of Central Institute, India Hasan Hüseyin Atar Ankara University, Turkey İlhan Altınok Karadeniz Technical University, Turkey Liliana Török Danube Delta National Institute for Research & Development, Romania Mahmut Elp Kastamonu University, Turkey Marina Alexandrovna Sazykina Southern Federal University, Russia Mehmet Gökoğlu Akdeniz University, Turkey Muhammad Naeem Khan University of the Punjab, Pakistan Sajmir Beqiraj University of Tirana, Albania Sefa Acarlı Çanakkale Onsekiz Mart University, Turkey Sitti Zayda B. Halun Mindanao State University, Philippines Sonya Uzunova Institute of Fishing Resources, Bulgaria Süleyman Özdemir Sinop University, Turkey -
Sea Cucumber Abundance, Diversity and Fisheries in Samoa; an Assessment of Lagoon Occurring Sea Cucumbers
2006-05-17 Sea cucumber abundance, diversity and fisheries in Samoa; an assessment of lagoon occurring sea cucumbers Part I: A wide approached survey to assess status of commercial beche-de-mer species in Samoa. & Part II: The subsistence and artisanal sea cucumber fishery, with particular focus on Stichopus horrens, in Samoa. B.G.H. Eriksson Preface This study was performed in Samoa from 2005-09-20 to 2005-12-20 and finalises my university studies at Uppsala University towards an M.Sc in Biology. The work presented in this paper came about after a series of events and I owe greatly to all of those that are mentioned in the acknowledgement section. During 2005 a request was put forward to The Secretariat of the Pacific Community (SPC) from the Samoan Fisheries Division to perform a survey on the coastal resources (including sea cucumber resources) around the country of Samoa in the South Pacific. The coastal component of the Pacific Region Oceanic and Coastal Fisheries (PROCFish/C) section of SPC started up this work in collaboration with the Samoan Fisheries Division in June and August 2005 and covered finfish and invertebrate resources in parts of Upolu and Savaii. The invertebrate surveys included fisheries dependent and fisheries independent data collection. The fisheries independent surveys were in-water assessments of stock and habitat in grounds that was pre-selected because of fishing activities in that area. The data collected was generally density estimates (incl. species composition) across shifting habitats, but also biological data, such as length and weight measurements. Alongside this information fishery dependent data was also collected. -
Promoting Nutritious Food Systems in the Pacific Islands About CTA
Profiling Bioactive Compounds and Key Nutrients in Pacific Island Crops and Marine Resources Promoting Nutritious Food Systems in the Pacific Islands About CTA The Technical Centre for Agricultural and Rural Cooperation (CTA) is a joint international institution of the African, Caribbean and Pacific (ACP) Group of States and the European Union (EU). CTA operates under the framework of the Cotonou Agreement and is funded CMYK LOGO by the EU. For more information on CTA, visit www.cta.int Written by Sunil Singh, The University of the South Pacific (USP), School of Biological and Chemical Sciences, Faculty of Science Technology and Environment Edited by Judith Ann Francis and Jana Dietershagen, CTA Designed by Stéphanie Leroy Disclaimer This work has been made with the financial assistance of the European Union. However, it remains under the sole responsibility of its author(s) and never reflects CTA’s or its co-publisher’s or European Union’s opinions or statements whatsoever nor as well the opinion of any country or State member. The user should make his/her own evaluation as to the appropriateness of any statements, argumentations, experimental technique or method as described in the work. Copyright notice This work is the intellectual property of CTA and its co-publishers. Its dissemination is encouraged for private study, research, teaching, under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/ legalcode), provided that appropriate acknowledgement is made: • of CTA’s copyright, in accordance with the license Creative Commons 4.0, and of EU financing, by including the name of the author, the title of the article and the following notice “© CTA 2018 EU financing”, • and that CTA’s or its co-publishers or EU’s endorsement of authors’ views, products or services is not implied in any way, by including the standard CTA disclaimer. -
Holothuriidae 1165
click for previous page Order Aspidochirotida - Holothuriidae 1165 Order Aspidochirotida - Holothuriidae HOLOTHURIIDAE iagnostic characters: Body dome-shaped in cross-section, with trivium (or sole) usually flattened Dand dorsal bivium convex and covered with papillae. Gonads forming a single tuft appended to the left dorsal mesentery. Tentacular ampullae present, long, and slender. Cuvierian organs present or absent. Dominant spicules in form of tables, buttons (simple or modified), and rods (excluding C-and S-shaped rods). Key to the genera and subgenera of Holothuriidae occurring in the area (after Clark and Rowe, 1971) 1a. Body wall very thick; podia and papillae short, more or less regularly arranged on bivium and trivium; spicules in form of rods, ovules, rosettes, but never as tables or buttons ......→ 2 1b. Body wall thin to thick; podia irregularly arranged on the bivium and scattered papillae on the trivium; spicules in various forms, with tables and/or buttons present ...(Holothuria) → 4 2a. Tentacles 20 to 30; podia ventral, irregularly arranged on the interradii or more regularly on the radii; 5 calcified anal teeth around anus; spicules in form of spinose rods and rosettes ...........................................Actinopyga 2b. Tentacles 20 to 25; podia ventral, usually irregularly arranged, rarely on the radii; no calcified anal teeth around anus, occasionally 5 groups of papillae; spicules in form of spinose and/or branched rods and rosettes ............................→ 3 3a. Podia on bivium arranged in 3 rows; spicules comprise rocket-shaped forms ....Pearsonothuria 3b. Podia on bivium not arranged in 3 rows; spicules not comprising rocket-shaped forms . Bohadschia 4a. Spicules in form of well-developed tables, rods and perforated plates, never as buttons .....→ 5 4b. -
SPC Beche-De-Mer Information Bulletin #39 – March 2019
ISSN 1025-4943 Issue 39 – March 2019 BECHE-DE-MER information bulletin v Inside this issue Editorial Towards producing a standard grade identification guide for bêche-de-mer in This issue of the Beche-de-mer Information Bulletin is well supplied with Solomon Islands 15 articles that address various aspects of the biology, fisheries and S. Lee et al. p. 3 aquaculture of sea cucumbers from three major oceans. An assessment of commercial sea cu- cumber populations in French Polynesia Lee and colleagues propose a procedure for writing guidelines for just after the 2012 moratorium the standard identification of beche-de-mer in Solomon Islands. S. Andréfouët et al. p. 8 Andréfouët and colleagues assess commercial sea cucumber Size at sexual maturity of the flower populations in French Polynesia and discuss several recommendations teatfish Holothuria (Microthele) sp. in the specific to the different archipelagos and islands, in the view of new Seychelles management decisions. Cahuzac and others studied the reproductive S. Cahuzac et al. p. 19 biology of Holothuria species on the Mahé and Amirantes plateaux Contribution to the knowledge of holo- in the Seychelles during the 2018 northwest monsoon season. thurian biodiversity at Reunion Island: Two previously unrecorded dendrochi- Bourjon and Quod provide a new contribution to the knowledge of rotid sea cucumbers species (Echinoder- holothurian biodiversity on La Réunion, with observations on two mata: Holothuroidea). species that are previously undescribed. Eeckhaut and colleagues P. Bourjon and J.-P. Quod p. 27 show that skin ulcerations of sea cucumbers in Madagascar are one Skin ulcerations in Holothuria scabra can symptom of different diseases induced by various abiotic or biotic be induced by various types of food agents. -
Identification of Tenuis of Four French Polynesian Carapini (Carapidae
CORE Metadata, citation and similar papers at core.ac.uk Provided by Open Marine Archive Marine Biology (2002) 140: 633–638 DOI 10.1007/s00227-001-0726-0 E. Parmentier Æ A. Lo-Yat Æ P. Vandewalle Identification of tenuis of four French Polynesian Carapini (Carapidae: Teleostei) Received: 7 April 2000 / Accepted: 13 July 2001 / Published online: 8 December 2001 Ó Springer-Verlag 2001 Abstract Four species of adult Carapini (Carapidae) 1981). After the hatching of elliptical eggs (Emery 1880; occur on Polynesian coral reefs: Encheliophis gracilis, Arnold 1956), planktonic Carapidae larvae are called Carapus boraborensis, C. homei and C. mourlani. Sam- vexillifer, due to the vexillum, a highly modified first ray ples collected in Rangiroa and Moorea allowed us to of the dorsal fin (Robertson 1975; Olney and Markle obtain different tenuis (larvae) duringtheir settlement 1979; Govoni et al. 1984). The disappearance of the phases or directly inside their hosts. These were sepa- vexillum and the significant lengthening of the body rated into four lots on the basis of a combination of bringa second larval stage,the tenuis (Padoa 1947; pigmentation, meristic, morphological, dental and oto- Strasburg1961; Markle and Olney 1990). At this stage, lith (sagittae) features. Comparison of these characters the fish larvae leave the pelagic area and some of them with those of the adults allows, for the first time, taxo- (e.g. Carapus acus, C. bermudensis) may enter a benthic nomic identification of these tenuis-stage larvae. host for the first time (Arnold 1956; Smith 1964; Smith and Tyler 1969; Smith et al. 1981). The tenuis shortens considerably and reaches the juvenile stage (Strasburg 1961). -
Cusk Eels, Brotulas [=Cherublemma Trotter [E
FAMILY Ophidiidae Rafinesque, 1810 - cusk eels SUBFAMILY Ophidiinae Rafinesque, 1810 - cusk eels [=Ofidini, Otophidioidei, Lepophidiinae, Genypterinae] Notes: Ofidini Rafinesque, 1810b:38 [ref. 3595] (ordine) Ophidion [as Ophidium; latinized to Ophididae by Bonaparte 1831:162, 184 [ref. 4978] (family); stem corrected to Ophidi- by Lowe 1843:92 [ref. 2832], confirmed by Günther 1862a:317, 370 [ref. 1969], by Gill 1872:3 [ref. 26254] and by Carus 1893:578 [ref. 17975]; considered valid with this authorship by Gill 1893b:136 [ref. 26255], by Goode & Bean 1896:345 [ref. 1848], by Nolf 1985:64 [ref. 32698], by Patterson 1993:636 [ref. 32940] and by Sheiko 2013:63 [ref. 32944] Article 11.7.2; family name sometimes seen as Ophidionidae] Otophidioidei Garman, 1899:390 [ref. 1540] (no family-group name) Lepophidiinae Robins, 1961:218 [ref. 3785] (subfamily) Lepophidium Genypterinae Lea, 1980 (subfamily) Genypterus [in unpublished dissertation: Systematics and zoogeography of cusk-eels of the family Ophidiidae, subfamily Ophidiinae, from the eastern Pacific Ocean, University of Miami, not available] GENUS Cherublemma Trotter, 1926 - cusk eels, brotulas [=Cherublemma Trotter [E. S.], 1926:119, Brotuloides Robins [C. R.], 1961:214] Notes: [ref. 4466]. Neut. Cherublemma lelepris Trotter, 1926. Type by monotypy. •Valid as Cherublemma Trotter, 1926 -- (Pequeño 1989:48 [ref. 14125], Robins in Nielsen et al. 1999:27, 28 [ref. 24448], Castellanos-Galindo et al. 2006:205 [ref. 28944]). Current status: Valid as Cherublemma Trotter, 1926. Ophidiidae: Ophidiinae. (Brotuloides) [ref. 3785]. Masc. Leptophidium emmelas Gilbert, 1890. Type by original designation (also monotypic). •Synonym of Cherublemma Trotter, 1926 -- (Castro-Aguirre et al. 1993:80 [ref. 21807] based on placement of type species, Robins in Nielsen et al. -
Updated Checklist of Marine Fishes (Chordata: Craniata) from Portugal and the Proposed Extension of the Portuguese Continental Shelf
European Journal of Taxonomy 73: 1-73 ISSN 2118-9773 http://dx.doi.org/10.5852/ejt.2014.73 www.europeanjournaloftaxonomy.eu 2014 · Carneiro M. et al. This work is licensed under a Creative Commons Attribution 3.0 License. Monograph urn:lsid:zoobank.org:pub:9A5F217D-8E7B-448A-9CAB-2CCC9CC6F857 Updated checklist of marine fishes (Chordata: Craniata) from Portugal and the proposed extension of the Portuguese continental shelf Miguel CARNEIRO1,5, Rogélia MARTINS2,6, Monica LANDI*,3,7 & Filipe O. COSTA4,8 1,2 DIV-RP (Modelling and Management Fishery Resources Division), Instituto Português do Mar e da Atmosfera, Av. Brasilia 1449-006 Lisboa, Portugal. E-mail: [email protected], [email protected] 3,4 CBMA (Centre of Molecular and Environmental Biology), Department of Biology, University of Minho, Campus de Gualtar, 4710-057 Braga, Portugal. E-mail: [email protected], [email protected] * corresponding author: [email protected] 5 urn:lsid:zoobank.org:author:90A98A50-327E-4648-9DCE-75709C7A2472 6 urn:lsid:zoobank.org:author:1EB6DE00-9E91-407C-B7C4-34F31F29FD88 7 urn:lsid:zoobank.org:author:6D3AC760-77F2-4CFA-B5C7-665CB07F4CEB 8 urn:lsid:zoobank.org:author:48E53CF3-71C8-403C-BECD-10B20B3C15B4 Abstract. The study of the Portuguese marine ichthyofauna has a long historical tradition, rooted back in the 18th Century. Here we present an annotated checklist of the marine fishes from Portuguese waters, including the area encompassed by the proposed extension of the Portuguese continental shelf and the Economic Exclusive Zone (EEZ). The list is based on historical literature records and taxon occurrence data obtained from natural history collections, together with new revisions and occurrences. -
Echinodermata) of Yap, Federated States of Micronesia
Shallow-water holothuroids (Echinodermata) of Yap, Federated States of Micronesia By Sun W. Kim*, Allison K. Miller, Catherine Brunson, Kristin Netchy, Ronald M. Clouse, Daniel Janies, Emmanuel Tardy, and Alexander M. Kerr Abstract In December 2002, July 2007 and December 2009, we surveyed the sea cucumber fauna of the western Caroline Island of Yap (Federated States of Micronesia). We collected 37 species of holothuroids, including 32 species of aspidochirotes and five species of apodans. We found all 13 of the previously reported species and 24 new records for the islands—19 aspidochirotes and five apodans. At least two of the new records appear to be previously undescribed species. Types of microhabitats and reef zonation were closely correlated with the species distributions of Yapese holothuroids.. *Corresponding Author E-mail: [email protected] Pacific Science, vol. 68, no. 3 February, 10, 2014 (Early view) Introduction Coral reefs are among the most biologically diverse marine ecosystems, yet they are threatened by climate change, overexploitation, eutrophication and ocean acidification (Hughes 1994, Reaka-Kudla 1997, Bruno et al. 2009). The currently known 93,000 coral reef associated species are estimated to only represent a small portion of the actual diversity (Reaka- Kudla 1997). In addition, many species have not been seen since their original descriptions, often over a century ago, causing ongoing taxonomic confusion. This taxonomic confusion is not limited to rare species; statuses of even some common species remain in flux. We clearly have much to learn about the alpha diversity of coral reefs (Reaka-Kudla 1997, Bouchet et al. 2002, Michonneau et al. -
Predator Defense Mechanisms in Shallow Water Sea Cucumbers (Holothuroidea)
PREDATOR DEFENSE MECHANISMS IN SHALLOW WATER SEA CUCUMBERS (HOLOTHUROIDEA) JESSICA A. CASTILLO Environmental Science Policy and Management, University of California, Berkeley, California 94720 USA Abstract. The various predator defense mechanisms possessed by shallow water sea cucumbers were surveyed in twelve different species and morphs. While many defense mechanisms such as the presence of Cuverian tubules, toxic secretions, and unpalatability have been identified in holothurians, I hypothesized that the possession of these traits as well as the degree to which they are utilized varies from species to species. The observed defense mechanisms were compared against a previously-derived phylogeny of the sea cucumbers of Moorea. Furthermore, I hypothesized that while the presence of such structures is most likely a result of the species’ placement on a phylogenetic tree, the degree to which they utilize such structures and their physical behavior are influenced by their individual ecologies. The presence of a red liquid secretion was restricted to individuals of the genus Holothuria (Linnaeus 1767) however not all members of the genus exhibited this trait. With the exception of H. leucospilota, which possessed both Cuverian tubules and a red secretion, Cuverian tubules were observed in members of the genus Bohadschia (Ostergren 1896). In accordance with the hypothesis, both the phylogenetics and individual ecology appear to influence predator defense mechanisms. However, even closely related species of similar ecology may differ considerably. Key words: holothurians; defense; toxicity; Cuverian tubules; Moorea, French Polynesia INTRODUCTION (Sakthivel et. Al, 1994). Approximately 20 species in two families and five genera, Sea cucumbers belong to the phylum including Holothuria, Bohadschia, and Thenelota, Echinodermata and the class Holothuroidea. -
Taxonomic Validation of Encheliophis Chardewalli with Description of Calling Abilities
Received: 10 January 2018 | Revised: 22 February 2018 | Accepted: 1 March 2018 DOI: 10.1002/jmor.20816 RESEARCH ARTICLE Taxonomic validation of Encheliophis chardewalli with description of calling abilities Eric Parmentier1 | Michael L. Fine2 | Cecile Berthe3 | David Lecchini3,4 1Universite de Liège, Laboratoire de Morphologie Fonctionnelle et Evolutive, UR Abstract FOCUS, AFFISH-RC, Institut de Chimie - Encheliophis chardewalli was described from a single cleared and stained specimen. Twelve years B6C, Liège, 4000, Belgium later, additional specimens were found in the lagoon of Moorea (French Polynesia) in association 2 Department of Biology, Virginia with their host, the sea cucumber Actinopyga mauritiana. These fish were used to consolidate the Commonwealth University, Richmond, species diagnosis, to validate species status and to record sound production. This species is Virginia, 23284 remarkable because of its ability to penetrate inside the cloaca of sea cucumbers having anal teeth 3EPHE, PSL Research University, UPVD- CNRS, USR3278 CRIOBE, Moorea, 98729, and the fact this species is largely unknown despite it lives in lagoons in 1m depth. Encheliophis French Polynesia chardewalli produced three sound types: long regular calls made of trains of numerous pulses, short 4Laboratoire d’Excellence “CORAIL”, irregular calls characterized by a constant lowering of its pulse period and short regular call (or Moorea, French Polynesia knock) made of 3 to 6 pulses. Comparison with other sympatric Carapini supports a large and dis- Correspondence tinct repertoire. Morphological characteristics could be the result of reduced body size allowing to Eric Parmentier, Universite de Liège, penetrate inside a new host, thus avoiding competition and conflict with other larger sympatric Laboratoire de Morphologie Fonctionnelle Carapini species. -
Population Genetics and Phylogeography of Hawaiian Coral Reef Echinoderms
ISLANDS, ARCHIPELAGOS, AND BEYOND: POPULATION GENETICS AND PHYLOGEOGRAPHY OF HAWAIIAN CORAL REEF ECHINODERMS A DISSERTATION SUBMITTED TO THE GRADUATE DIVISION OF THE UNIVERSITY OF HAWAI‘I AT MĀNOA IN PARTIAL FULFILLMENT OF THE REQUIREMENT FOR THE DEGREE OF DOCTOR OF PHILOSOPHY IN ZOOLOGY AUGUST 2012 By Derek J. Skillings Dissertation Committee: Robert Toonen, Chairperson Brian Bowen Charles Birkeland Andrew Taylor Ronald Bontekoe i DEDICATION This dissertation is dedicated to my wife, Melissa Kay Skillings. ii ACKNOWLEDGEMENTS First, I would like to thank my committee members who provided essential guidance and encouragement throughout my graduate career. Foremost, I would like to thank my advisor and committee chair Rob Toonen. He has generously offered me a near endless supply of advice and guidance, as he does for anyone who knocks on his door. He also gave me the flexibility and encouragement needed to make getting two simultaneous graduate degrees possible. My graduate career has been very unconventional, and Rob has supported me every step of the way. I would like to thank Brian Bowen for giving me the structure I needed to succeed. Given my tendency to get lost in an always increasing number of projects, I would have never finished in a reasonable amount of time without his firm hand at setting deadlines and his enthusiastic encouragement to meet those deadlines. Rob and Brian gave me the perfect balance of freedom and focus that I needed to succeed. I would like to thank Chuck Birkeland for helping me to put my work in the larger perspective of coral reef ecosystems. Chuck also encouraged my philosophical and historical investigations into biology through insightful conversation; every time I saw he seemed to have a valuable and important text that he wanted to give me for my collection, many from his personal library.