Wood and Stem Anatomy of Lardizabalaceae, with Comments on the Vining Habit, Ecology and Systematics
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Plant List 2016
Established 1990 PLANT LIST 2016 European mail order website www.crug-farm.co.uk CRÛG FARM PLANTS • 2016 Welcome to our 2016 list hope we can tempt you with plenty of our old favourites as well as some exciting new plants that we have searched out on our travels. There has been little chance of us standing still with what has been going on here in 2015. The year started well with the birth of our sixth grandchild. January into February had Sue and I in Colombia for our first winter/early spring expedition. It was exhilarating, we were able to travel much further afield than we had previously, as the mountainous areas become safer to travel. We are looking forward to working ever closer with the Colombian institutes, such as the Medellin Botanic Gardens whom we met up with. Consequently we were absent from the RHS February Show at Vincent Square. We are finding it increasingly expensive participating in the London shows, while re-branding the RHS February Show as a potato event hardly encourages our type of customer base to visit. A long standing speaking engagement and a last minute change of date, meant that we missed going to Fota near Cork last spring, no such problem this coming year. We were pleasantly surprised at the level of interest at the Trgrehan Garden Rare Plant Fair, in Cornwall. Hopefully this will become an annual event for us, as well as the Cornwall Garden Society show in April. Poor Sue went through the wars having to have a rush hysterectomy in June, after some timely results revealed future risks. -
Alphabetical Lists of the Vascular Plant Families with Their Phylogenetic
Colligo 2 (1) : 3-10 BOTANIQUE Alphabetical lists of the vascular plant families with their phylogenetic classification numbers Listes alphabétiques des familles de plantes vasculaires avec leurs numéros de classement phylogénétique FRÉDÉRIC DANET* *Mairie de Lyon, Espaces verts, Jardin botanique, Herbier, 69205 Lyon cedex 01, France - [email protected] Citation : Danet F., 2019. Alphabetical lists of the vascular plant families with their phylogenetic classification numbers. Colligo, 2(1) : 3- 10. https://perma.cc/2WFD-A2A7 KEY-WORDS Angiosperms family arrangement Summary: This paper provides, for herbarium cura- Gymnosperms Classification tors, the alphabetical lists of the recognized families Pteridophytes APG system in pteridophytes, gymnosperms and angiosperms Ferns PPG system with their phylogenetic classification numbers. Lycophytes phylogeny Herbarium MOTS-CLÉS Angiospermes rangement des familles Résumé : Cet article produit, pour les conservateurs Gymnospermes Classification d’herbier, les listes alphabétiques des familles recon- Ptéridophytes système APG nues pour les ptéridophytes, les gymnospermes et Fougères système PPG les angiospermes avec leurs numéros de classement Lycophytes phylogénie phylogénétique. Herbier Introduction These alphabetical lists have been established for the systems of A.-L de Jussieu, A.-P. de Can- The organization of herbarium collections con- dolle, Bentham & Hooker, etc. that are still used sists in arranging the specimens logically to in the management of historical herbaria find and reclassify them easily in the appro- whose original classification is voluntarily pre- priate storage units. In the vascular plant col- served. lections, commonly used methods are systema- Recent classification systems based on molecu- tic classification, alphabetical classification, or lar phylogenies have developed, and herbaria combinations of both. -
The Developmental and Genetic Bases of Apetaly in Bocconia Frutescens
Arango‑Ocampo et al. EvoDevo (2016) 7:16 DOI 10.1186/s13227-016-0054-6 EvoDevo RESEARCH Open Access The developmental and genetic bases of apetaly in Bocconia frutescens (Chelidonieae: Papaveraceae) Cristina Arango‑Ocampo1, Favio González2, Juan Fernando Alzate3 and Natalia Pabón‑Mora1* Abstract Background: Bocconia and Macleaya are the only genera of the poppy family (Papaveraceae) lacking petals; how‑ ever, the developmental and genetic processes underlying such evolutionary shift have not yet been studied. Results: We studied floral development in two species of petal-less poppies Bocconia frutescens and Macleaya cordata as well as in the closely related petal-bearing Stylophorum diphyllum. We generated a floral transcriptome of B. frutescens to identify MADS-box ABCE floral organ identity genes expressed during early floral development. We performed phylogenetic analyses of these genes across Ranunculales as well as RT-PCR and qRT-PCR to assess loci- specific expression patterns. We found that petal-to-stamen homeosis in petal-less poppies occurs through distinct developmental pathways. Transcriptomic analyses of B. frutescens floral buds showed that homologs of all MADS-box genes are expressed except for the APETALA3-3 ortholog. Species-specific duplications of other ABCE genes inB. frute- scens have resulted in functional copies with expanded expression patterns than those predicted by the model. Conclusions: Petal loss in B. frutescens is likely associated with the lack of expression of AP3-3 and an expanded expression of AGAMOUS. The genetic basis of petal identity is conserved in Ranunculaceae and Papaveraceae although they have different number of AP3 paralogs and exhibit dissimilar floral groundplans. -
Bio 308-Course Guide
COURSE GUIDE BIO 308 BIOGEOGRAPHY Course Team Dr. Kelechi L. Njoku (Course Developer/Writer) Professor A. Adebanjo (Programme Leader)- NOUN Abiodun E. Adams (Course Coordinator)-NOUN NATIONAL OPEN UNIVERSITY OF NIGERIA BIO 308 COURSE GUIDE National Open University of Nigeria Headquarters 14/16 Ahmadu Bello Way Victoria Island Lagos Abuja Office No. 5 Dar es Salaam Street Off Aminu Kano Crescent Wuse II, Abuja e-mail: [email protected] URL: www.nou.edu.ng Published by National Open University of Nigeria Printed 2013 ISBN: 978-058-434-X All Rights Reserved Printed by: ii BIO 308 COURSE GUIDE CONTENTS PAGE Introduction ……………………………………......................... iv What you will Learn from this Course …………………............ iv Course Aims ……………………………………………............ iv Course Objectives …………………………………………....... iv Working through this Course …………………………….......... v Course Materials ………………………………………….......... v Study Units ………………………………………………......... v Textbooks and References ………………………………........... vi Assessment ……………………………………………….......... vi End of Course Examination and Grading..................................... vi Course Marking Scheme................................................................ vii Presentation Schedule.................................................................... vii Tutor-Marked Assignment ……………………………….......... vii Tutors and Tutorials....................................................................... viii iii BIO 308 COURSE GUIDE INTRODUCTION BIO 308: Biogeography is a one-semester, 2 credit- hour course in Biology. It is a 300 level, second semester undergraduate course offered to students admitted in the School of Science and Technology, School of Education who are offering Biology or related programmes. The course guide tells you briefly what the course is all about, what course materials you will be using and how you can work your way through these materials. It gives you some guidance on your Tutor- Marked Assignments. There are Self-Assessment Exercises within the body of a unit and/or at the end of each unit. -
Akebia Quinata
Akebia quinata Akebia quinata Chocolate vine, five- leaf Akebia Introduction Native to eastern Asia, the genus Akebia consists of five species, with four species and three subspecies reported in China[168]. Members of this genus are deciduous or semi-deciduous twining vines. The roots, vines, and fruits can be used for medicinal purposes. The sweet fruits can be used in wine-making[4]. Taxonomy: Akebia quinata leaves. (Photo by Shep Zedaker, Virginia Polytechnic Institute & State FAM ILY: Lardizabalaceae University.) Genus: Akebia Decne. clustered on the branchlets, and divided male and the rest are female. Appearing Species of Akebia in China into five, or sometimes three to four from June to August, oblong or elliptic purplish fruits split open when mature, revealing dark, brownish, flat seeds Scientific Name Scientific Name arranged irregularly in rows[4]. A. chingshuiensis T. Shimizu A. quinata (Houtt.) Decne A. longeracemosa Matsumura A. trifoliata (Thunb.) Koidz Habitat and Distribution A. quinata grows near forest margins Description or six to seven papery leaflets that are along streams, as scrub on mountain Akebia quinata is a deciduous woody obovate or obovately elliptic, 2-5 cm slopes at 300 - 1500 m elevation, in vine with slender, twisting, cylindrical long, 1.5-2.5 cm wide, with a round or most of the provinces through which [4] stems bearing small, round lenticels emarginate apex and a round or broadly the Yellow River flows . It has a native on the grayish brown surface. Bud cuneate base. Infrequently blooming, range in Anhui, Fujian, Henan, Hubei, scales are light reddish-brown with the inflorescence is an axillary raceme Hunan, Jiangsu, Jiangxi, Shandong, an imbricate arrangement. -
Evolutionary History of Floral Key Innovations in Angiosperms Elisabeth Reyes
Evolutionary history of floral key innovations in angiosperms Elisabeth Reyes To cite this version: Elisabeth Reyes. Evolutionary history of floral key innovations in angiosperms. Botanics. Université Paris Saclay (COmUE), 2016. English. NNT : 2016SACLS489. tel-01443353 HAL Id: tel-01443353 https://tel.archives-ouvertes.fr/tel-01443353 Submitted on 23 Jan 2017 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. NNT : 2016SACLS489 THESE DE DOCTORAT DE L’UNIVERSITE PARIS-SACLAY, préparée à l’Université Paris-Sud ÉCOLE DOCTORALE N° 567 Sciences du Végétal : du Gène à l’Ecosystème Spécialité de Doctorat : Biologie Par Mme Elisabeth Reyes Evolutionary history of floral key innovations in angiosperms Thèse présentée et soutenue à Orsay, le 13 décembre 2016 : Composition du Jury : M. Ronse de Craene, Louis Directeur de recherche aux Jardins Rapporteur Botaniques Royaux d’Édimbourg M. Forest, Félix Directeur de recherche aux Jardins Rapporteur Botaniques Royaux de Kew Mme. Damerval, Catherine Directrice de recherche au Moulon Président du jury M. Lowry, Porter Curateur en chef aux Jardins Examinateur Botaniques du Missouri M. Haevermans, Thomas Maître de conférences au MNHN Examinateur Mme. Nadot, Sophie Professeur à l’Université Paris-Sud Directeur de thèse M. -
Buzzing Bees and the Evolution of Sexual Floral Dimorphism in Australian Spiny Solanum
BUZZING BEES AND THE EVOLUTION OF SEXUAL FLORAL DIMORPHISM IN AUSTRALIAN SPINY SOLANUM ARTHUR SELWYN MARK School of Agriculture Food & Wine The University of Adelaide This thesis is submitted in fulfillment of the degree of Doctor of Philosophy June2014 1 2 Table of Contents List of Tables........................................................................................................... 6 List of Figures ......................................................................................................... 7 List of Boxes ......................................................................................................... 10 Abstract ................................................................................................................. 11 Declaration ............................................................................................................ 14 Acknowledgements ............................................................................................... 15 Chapter One - Introduction ................................................................................... 18 Floral structures for animal pollination .......................................................... 18 Specialisation in pollination .................................................................... 19 Specialisation in unisexual species ......................................................... 19 Australian Solanum species and their floral structures .................................. 21 Floral dimorphisms ................................................................................ -
Reconstructing the Basal Angiosperm Phylogeny: Evaluating Information Content of Mitochondrial Genes
55 (4) • November 2006: 837–856 Qiu & al. • Basal angiosperm phylogeny Reconstructing the basal angiosperm phylogeny: evaluating information content of mitochondrial genes Yin-Long Qiu1, Libo Li, Tory A. Hendry, Ruiqi Li, David W. Taylor, Michael J. Issa, Alexander J. Ronen, Mona L. Vekaria & Adam M. White 1Department of Ecology & Evolutionary Biology, The University Herbarium, University of Michigan, Ann Arbor, Michigan 48109-1048, U.S.A. [email protected] (author for correspondence). Three mitochondrial (atp1, matR, nad5), four chloroplast (atpB, matK, rbcL, rpoC2), and one nuclear (18S) genes from 162 seed plants, representing all major lineages of gymnosperms and angiosperms, were analyzed together in a supermatrix or in various partitions using likelihood and parsimony methods. The results show that Amborella + Nymphaeales together constitute the first diverging lineage of angiosperms, and that the topology of Amborella alone being sister to all other angiosperms likely represents a local long branch attrac- tion artifact. The monophyly of magnoliids, as well as sister relationships between Magnoliales and Laurales, and between Canellales and Piperales, are all strongly supported. The sister relationship to eudicots of Ceratophyllum is not strongly supported by this study; instead a placement of the genus with Chloranthaceae receives moderate support in the mitochondrial gene analyses. Relationships among magnoliids, monocots, and eudicots remain unresolved. Direct comparisons of analytic results from several data partitions with or without RNA editing sites show that in multigene analyses, RNA editing has no effect on well supported rela- tionships, but minor effect on weakly supported ones. Finally, comparisons of results from separate analyses of mitochondrial and chloroplast genes demonstrate that mitochondrial genes, with overall slower rates of sub- stitution than chloroplast genes, are informative phylogenetic markers, and are particularly suitable for resolv- ing deep relationships. -
South American Cacti in Time and Space: Studies on the Diversification of the Tribe Cereeae, with Particular Focus on Subtribe Trichocereinae (Cactaceae)
Zurich Open Repository and Archive University of Zurich Main Library Strickhofstrasse 39 CH-8057 Zurich www.zora.uzh.ch Year: 2013 South American Cacti in time and space: studies on the diversification of the tribe Cereeae, with particular focus on subtribe Trichocereinae (Cactaceae) Lendel, Anita Posted at the Zurich Open Repository and Archive, University of Zurich ZORA URL: https://doi.org/10.5167/uzh-93287 Dissertation Published Version Originally published at: Lendel, Anita. South American Cacti in time and space: studies on the diversification of the tribe Cereeae, with particular focus on subtribe Trichocereinae (Cactaceae). 2013, University of Zurich, Faculty of Science. South American Cacti in Time and Space: Studies on the Diversification of the Tribe Cereeae, with Particular Focus on Subtribe Trichocereinae (Cactaceae) _________________________________________________________________________________ Dissertation zur Erlangung der naturwissenschaftlichen Doktorwürde (Dr.sc.nat.) vorgelegt der Mathematisch-naturwissenschaftlichen Fakultät der Universität Zürich von Anita Lendel aus Kroatien Promotionskomitee: Prof. Dr. H. Peter Linder (Vorsitz) PD. Dr. Reto Nyffeler Prof. Dr. Elena Conti Zürich, 2013 Table of Contents Acknowledgments 1 Introduction 3 Chapter 1. Phylogenetics and taxonomy of the tribe Cereeae s.l., with particular focus 15 on the subtribe Trichocereinae (Cactaceae – Cactoideae) Chapter 2. Floral evolution in the South American tribe Cereeae s.l. (Cactaceae: 53 Cactoideae): Pollination syndromes in a comparative phylogenetic context Chapter 3. Contemporaneous and recent radiations of the world’s major succulent 86 plant lineages Chapter 4. Tackling the molecular dating paradox: underestimated pitfalls and best 121 strategies when fossils are scarce Outlook and Future Research 207 Curriculum Vitae 209 Summary 211 Zusammenfassung 213 Acknowledgments I really believe that no one can go through the process of doing a PhD and come out without being changed at a very profound level. -
Comparative Analysis and Phylogenetic Investigation of Hong
www.nature.com/scientificreports OPEN Comparative analysis and phylogenetic investigation of Hong Kong Ilex chloroplast genomes Bobby Lim‑Ho Kong1,3, Hyun‑Seung Park2, Tai‑Wai David Lau1,3, Zhixiu Lin4, Tae‑Jin Yang2 & Pang‑Chui Shaw1,3* Ilex is a monogeneric plant group (containing approximately 600 species) in the Aquifoliaceae family and one of the most commonly used medicinal herbs. However, its taxonomy and phylogenetic relationships at the species level are debatable. Herein, we obtained the complete chloroplast genomes of all 19 Ilex types that are native to Hong Kong. The genomes are conserved in structure, gene content and arrangement. The chloroplast genomes range in size from 157,119 bp in Ilex gracilifora to 158,020 bp in Ilex kwangtungensis. All these genomes contain 125 genes, of which 88 are protein‑coding and 37 are tRNA genes. Four highly varied sequences (rps16-trnQ, rpl32-trnL, ndhD-psaC and ycf1) were found. The number of repeats in the Ilex genomes is mostly conserved, but the number of repeating motifs varies. The phylogenetic relationship among the 19 Ilex genomes, together with eight other available genomes in other studies, was investigated. Most of the species could be correctly assigned to the section or even series level, consistent with previous taxonomy, except Ilex rotunda var. microcarpa, Ilex asprella var. tapuensis and Ilex chapaensis. These species were reclassifed; I. rotunda was placed in the section Micrococca, while the other two were grouped with the section Pseudoaquifolium. These studies provide a better understanding of Ilex phylogeny and refne its classifcation. Ilex, a monogeneric plant group in the family Aquifoliaceae, is a widespread genus. -
Reproductive Morphology of Sargentodoxa Cuneata (Lardizabalaceae) and Its Systematic Implications
Reproductive morphology of Sargentodoxa cuneata (Lardizabalaceae) and its systematic implications. By: Hua-Feng Wang, Bruce K. Kirchoff and Zhi-Xin Zhu Wang, H.-F., Kirchoff, B. K., Qin, H.-N., Zhu, Z.-X. 2009. Reproductive morphology of Sargentodoxa cuneata (Lardizabalaceae) and its systematic implications. Plant Systematics and Evolution 280: 207–217. Made available courtesy of Springer-Verlag. The original publication is available at http://link.springer.com/article/10.1007%2Fs00606-009-0179-3. ***Reprinted with permission. No further reproduction is authorized without written permission from Springer-Verlag. This version of the document is not the version of record. Figures and/or pictures may be missing from this format of the document. *** Abstract: The reproductive morphology of Sargentodoxa cuneata (Oliv) Rehd. et Wils. is investigated through field, herbarium, and laboratory observations. Sargentodoxa may be either dioecious or monoecious. The functionally unisexual flowers are morphologically bisexual, at least developmentally. The anther is tetrasporangiate, and its wall, of which the development follows the basic type, is composed of an epidermis, endothecium, two middle layers, and a tapetum. The tapetum is of the glandular type. Microspore cytokinesis is simultaneous, and the microspore tetrads are tetrahedral. Pollen grains are two-celled when shed. The mature ovule is crassinucellate and bitegmic, and the micropyle is formed only by the inner integument. Megasporocytes undergo meiosis resulting in the formation of four megaspores in a linear tetrad. The functional megaspore develops into an eight-nucleate embryo sac after three rounds of mitosis. The mature embryo sac consists of an egg apparatus (an egg and two synergids), a central cell, and three antipodal cells. -
Within-Population Genetic Diversity of Climbing Plants and Trees in a Temperate Forest in Central Chile
Gayana Bot. 70(1),70(1): 201336-43, 2013 ISSN 0016-5301 Within-population genetic diversity of climbing plants and trees in a temperate forest in central Chile Diversidad genética intra-poblacional de plantas trepadoras y árboles en un bosque templado en Chile central CRISTIAN TORRES-DÍAZ1, EDUARDO RUIZ2, CRISTIAN SALGADO-LUARTE3, MARCO A. MOLINA-MONTENEGRO4 & ERNESTO GIANOLI3* 1Laboratorio de Genómica & Biodiversidad, Departamento de Ciencias Básicas, Universidad del Bío-Bío, Casilla 447, Chillán Chile. 2Departamento de Botánica, Facultad de Ciencias Naturales y Oceanográficas, Universidad de Concepción, Casilla 160-C Concepción, Chile. 3Departamento de Biología, Universidad de La Serena, Casilla 554 La Serena, Chile. 4Centro de Estudios Avanzados en Zonas Áridas (CEAZA), Facultad de Ciencias del Mar, Universidad Católica del Norte, Larrondo 1281, Coquimbo, Chile. [email protected] ABSTRACT The climbing habit is a key innovation in angiosperm evolution: climbing plant taxa have greater species richness than their non-climbing sister groups. It is considered that highly diversified clades should show increased among-population genetic differentiation. Less clear is the expected pattern regarding within-population genetic diversity in speciose lineages. We tested the hypothesis of greater within-population genetic diversity in climbing plants compared to trees in a temperate forest in central Chile. The assumption underlying this hypothesis is that higher among-population differentiation in climbers compared to trees should reflect higher genetic diversity as well. AFLP markers from 167 individual plants from 14 species (seven climbers and seven trees) were used to estimate the following indices of within-population genetic diversity: mean unbiased expected heterozygosity (HE), percentage of polymorphic loci (PPL), Shannon information index (I), and the effective number of alleles (NE).