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Identification of Selective Sweeps, Major Genes, and Genotype by Diet Interactions Melanie D
University of Nebraska - Lincoln DigitalCommons@University of Nebraska - Lincoln Theses and Dissertations in Animal Science Animal Science Department 12-2015 Genomic Analysis of Sow Reproductive Traits: Identification of Selective Sweeps, Major Genes, and Genotype by Diet Interactions Melanie D. Trenhaile University of Nebraska-Lincoln, [email protected] Follow this and additional works at: http://digitalcommons.unl.edu/animalscidiss Part of the Meat Science Commons Trenhaile, Melanie D., "Genomic Analysis of Sow Reproductive Traits: Identification of Selective Sweeps, Major Genes, and Genotype by Diet Interactions" (2015). Theses and Dissertations in Animal Science. 114. http://digitalcommons.unl.edu/animalscidiss/114 This Article is brought to you for free and open access by the Animal Science Department at DigitalCommons@University of Nebraska - Lincoln. It has been accepted for inclusion in Theses and Dissertations in Animal Science by an authorized administrator of DigitalCommons@University of Nebraska - Lincoln. GENOMIC ANALYSIS OF SOW REPRODUCTIVE TRAITS: IDENTIFICATION OF SELECTIVE SWEEPS, MAJOR GENES, AND GENOTYPE BY DIET INTERACTIONS By Melanie Dawn Trenhaile A THESIS Presented to the Faculty of The Graduate College at the University of Nebraska In Partial Fulfillment of Requirements For the Degree of Master of Science Major: Animal Science Under the Supervision of Professor Daniel Ciobanu Lincoln, Nebraska December, 2015 GENOMIC ANALYSIS OF SOW REPRODUCTIVE TRAITS: IDENTIFICATION OF SELECTIVE SWEEPS, MAJOR GENES, AND GENOTYPE BY DIET INTERACTIONS Melanie D. Trenhaile, M.S. University of Nebraska, 2015 Advisor: Daniel Ciobanu Reproductive traits, such as litter size and reproductive longevity, are economically important. However, selection for these traits is difficult due to low heritability, polygenic nature, sex-limited expression, and expression late in life. -
Lawrie & Symington
Lawrie & Symington Ltd Lanark Agricultural Centre Sale of Poultry, Waterfowl and Pigs etc. Thursday 17th March, 2016 Ringstock at 10.30 a.m. General Hall at 11.00 a.m Lanark Agricultural Centre Sale of Poultry and Waterfowl Special Conditions of Sale The Sale will be conducted subject to the Conditions of Sale of Lawrie and Symington Ltd as approved by the Institute of Auctioneers and Appraisers in Scotland which will be on display in the Auctioneer’s office on the day of sale. In addition the following conditions apply. 1. No animal may be sold privately prior to the sale, but must be offered for sale through the ring. 2. Animals which fail to reach the price fixed by the vendor may be sold by Private Treaty after the Auction. All such sales must be passed through the Auctioneers and will be subject to full commission. Reserve Prices should be given in writing to the auctioneer prior to the commencement of the sale. 3. All stock must be numbered and penned in accordance with the catalogued number on arrival at the market. 4. All entries offered for sale must be pre-entered in writing and paid for in full with the entries being allocated on a first come first served basis by the closing date or at 324 2x2 Cages and/or at 70 3x3 Cages, whichever is earliest. 5. No substitutes to entries will be accepted 10 days prior to the date of sale. Any substitutes brought on the sale day WILL NOT BE OFFERED FOR SALE. 6. -
1 a Lleyn Sweep for Local Sheep? Breed Societies and the Geographies of Welsh Livestock
A Lleyn Sweep for Local Sheep? Breed Societies and the Geographies of Welsh Livestock Richard Yarwood* and Nick Evans+ * School of Geography, University of Plymouth, Drake Circus, Plymouth, PL4 8AA. [email protected] 01752 233083 + Centre for Rural Research Department of Applied Sciences, Geography and Archaeology, University College Worcester, Henwick Grove, Worcester, WR2 6AJ. 01905 855197 [email protected] Abstract This paper uses Bourdieu’s (1977) concept of habitus to examine human-animal relationships within capitalist agricultural systems. The first part of the paper examines how Bourdieu’s ideas have been used by academics to provide insights into the ways that livestock affect and are affected by farming practice. The second part builds on these conceptual, empirical and policy insights by examining some of the national and international social networks that contribute to human-animal relationships in capitalistic farming. It focuses on a case study of Welsh livestock and, in particular, the historic and contemporary roles that breed societies play in the imagination of farm animals and the creation of capitals in agriculture. 1 A Lleyn Sweep for Local Sheep? Breed Societies and the Geographies of Welsh Livestock ‘The mountain sheep are sweeter, But the valley sheep are fatter; And so we deemed it meeter To take away the latter.’ „The War-Song of the Dinas Vawr‟ Thomas Love Peacock (1829) Introduction The relationships between animals, locality and society have come under increased scrutiny by geographers (Philo, 1995; Wolch and Emel, 1995; Wolch, 1998; Philo and Wilbert, 2000). An emerging body of literature is critically reappraising the place of animals within capitalist agricultural systems, reflecting the three main trajectories of animal geography (Whatmore, 2000). -
Preserving Genetic Resources in Agriculture Achievements of the 17 Projects of the Community Programme 2006-2011
Preserving genetic resources in agriculture Achievements of the 17 projects of the Community Programme 2006-2011 Agriculture and Rural Development Europe Direct is a service to help you find answers to your questions about the European Union. Freephone number (*): 00 800 6 7 8 9 10 11 (*) Certain mobile telephone operators do not allow access to 00 800 numbers or these calls may be billed. More information on the European Union is available at: http://europa.eu The projects’ executive summaries were prepared by the implementing organisations. Further details regarding the projects can be found at: http://ec.europa.eu/agriculture/genetic-resources/actions/index_en.htm The information and views set out in this publication are those of the authors and do not necessarily reflect the official opinion of the European Union. Neither the European Union institutions and bodies nor any person acting on their behalf may be held responsible for the use which may be made of the information contained therein. The text of this publication is for information purposes only and is not legally binding. The maps in this publication are only indicative. The borders shown on the maps do not necessarily represent the official position of the European Union. Reproduction is authorized, provided the source is acknowledged. All photos are under copyright. Copyright of the photos: European Commission © European Commission, 2013 Printed in Belgium Printed on recycled paper Preserving genetic resources in agriculture Achievements of the 17 projects of the Community Programme 2006-2011 Foreword Maintaining and developing sustainable uses for agricultural The Community programme has promoted the preservation of genetic resources is essential for ensuring food security in genetic diversity and the exchange of information across a sustainable manner. -
Complaint Report
EXHIBIT A ARKANSAS LIVESTOCK & POULTRY COMMISSION #1 NATURAL RESOURCES DR. LITTLE ROCK, AR 72205 501-907-2400 Complaint Report Type of Complaint Received By Date Assigned To COMPLAINANT PREMISES VISITED/SUSPECTED VIOLATOR Name Name Address Address City City Phone Phone Inspector/Investigator's Findings: Signed Date Return to Heath Harris, Field Supervisor DP-7/DP-46 SPECIAL MATERIALS & MARKETPLACE SAMPLE REPORT ARKANSAS STATE PLANT BOARD Pesticide Division #1 Natural Resources Drive Little Rock, Arkansas 72205 Insp. # Case # Lab # DATE: Sampled: Received: Reported: Sampled At Address GPS Coordinates: N W This block to be used for Marketplace Samples only Manufacturer Address City/State/Zip Brand Name: EPA Reg. #: EPA Est. #: Lot #: Container Type: # on Hand Wt./Size #Sampled Circle appropriate description: [Non-Slurry Liquid] [Slurry Liquid] [Dust] [Granular] [Other] Other Sample Soil Vegetation (describe) Description: (Place check in Water Clothing (describe) appropriate square) Use Dilution Other (describe) Formulation Dilution Rate as mixed Analysis Requested: (Use common pesticide name) Guarantee in Tank (if use dilution) Chain of Custody Date Received by (Received for Lab) Inspector Name Inspector (Print) Signature Check box if Dealer desires copy of completed analysis 9 ARKANSAS LIVESTOCK AND POULTRY COMMISSION #1 Natural Resources Drive Little Rock, Arkansas 72205 (501) 225-1598 REPORT ON FLEA MARKETS OR SALES CHECKED Poultry to be tested for pullorum typhoid are: exotic chickens, upland birds (chickens, pheasants, pea fowl, and backyard chickens). Must be identified with a leg band, wing band, or tattoo. Exemptions are those from a certified free NPIP flock or 90-day certificate test for pullorum typhoid. Water fowl need not test for pullorum typhoid unless they originate from out of state. -
ACE Appendix
CBP and Trade Automated Interface Requirements Appendix: PGA August 13, 2021 Pub # 0875-0419 Contents Table of Changes .................................................................................................................................................... 4 PG01 – Agency Program Codes ........................................................................................................................... 18 PG01 – Government Agency Processing Codes ................................................................................................... 22 PG01 – Electronic Image Submitted Codes .......................................................................................................... 26 PG01 – Globally Unique Product Identification Code Qualifiers ........................................................................ 26 PG01 – Correction Indicators* ............................................................................................................................. 26 PG02 – Product Code Qualifiers ........................................................................................................................... 28 PG04 – Units of Measure ...................................................................................................................................... 30 PG05 – Scientific Species Code ........................................................................................................................... 31 PG05 – FWS Wildlife Description Codes ........................................................................................................... -
Pigs Class: P0001/0525 Boar, Born in 2018
Pig Section Results - 2019 SECTION: PIETRAIN PIGS CLASS: P0001/0525 BOAR, BORN IN 2018 Placing Exhibitor Catalogue No. Livestock Name 1 Miss A Newth, Shepton Mallet, Somerset (2) Prestcombe Merry 9 2 Mr J Kingdon, Newquay, Cornwall (1) Warburton Obertus 2 SECTION: PIETRAIN PIGS CLASS: P0001/0526 BOAR BORN IN 2019 Placing Exhibitor Catalogue No. Livestock Name 1 Miss A Newth, Shepton Mallet, Somerset (4) Prestcombe Merry 2 Mr J Kingdon, Newquay, Cornwall (3) Middlelanherne Zenk 1237 SECTION: PIETRAIN PIGS CLASS: P0001/0527 SOW OR GILT BORN BEFORE 1 JULY 2018 Placing Exhibitor Catalogue No. Livestock Name 1 Mr J Kingdon, Newquay, Cornwall (5) Middlelanherne Pauline 1190 SECTION: PIETRAIN PIGS CLASS: P0001/0528 GILT BORN IN 2018, ON OR AFTER 1 JULY. Placing Exhibitor Catalogue No. Livestock Name 1 Miss A Newth, Shepton Mallet, Somerset (10) Prestcombe Rosi 2 2 Miss A Newth, Shepton Mallet, Somerset (9) Prestcombe Pauline 8 3 Mr D & Miss S Pawson, Doncaster, South Yorkshire (11) Warburton Pauline 3 4 Mr G & Mrs A Pawson, Manchester, (13) Warburton Pauline 6 7 Mr J Kingdon, Newquay, Cornwall (6) Middlelanherne Pauline 1234 ROYAL CORNWALL SHOW 2019 - PIG SECTION RESULTS 17 June 2019 Page 1 of 29 SECTION: PIETRAIN PIGS CLASS: P0001/0529 GILT BORN IN 2019 Placing Exhibitor Catalogue No. Livestock Name 1 Miss A Newth, Shepton Mallet, Somerset (15) Prestcombe Rosi 2 Mr G & Mrs A Pawson, Manchester, (17) Warburton Pauline 7 3 Mr J Kingdon, Newquay, Cornwall (14) Middlelanherne Pauline 1242 4 Mr G & Mrs A Pawson, Manchester, (18) Warburton Pauline 8 SECTION: PIETRAIN PIGS CLASS: P0001/A761 A SPECIAL PRIZE OF ROSETTES ARE OFFERED BY THE R.C.A.A. -
Snomed Ct Dicom Subset of January 2017 Release of Snomed Ct International Edition
SNOMED CT DICOM SUBSET OF JANUARY 2017 RELEASE OF SNOMED CT INTERNATIONAL EDITION EXHIBIT A: SNOMED CT DICOM SUBSET VERSION 1. -
Genome-Wide Footprints of Pig Domestication and Selection Revealed Through Massive Parallel Sequencing of Pooled DNA
Genome-Wide Footprints of Pig Domestication and Selection Revealed through Massive Parallel Sequencing of Pooled DNA Andreia J. Amaral1*, Luca Ferretti2,3, Hendrik-Jan Megens1, Richard P. M. A. Crooijmans1, Haisheng Nie1, Sebastian E. Ramos-Onsins2,3, Miguel Perez-Enciso2,3,4, Lawrence B. Schook5, Martien A. M. Groenen1 1 Animal Breeding and Genomics Centre, Wageningen University, Wageningen, The Netherlands, 2 Department of Animal Science and Food Technology, Universitat Autonoma de Barcelona, Bellaterra, Spain, 3 Animal Science Department, Centre for Research in Agricultural Genomics, Bellaterra, Spain, 4 Life and Medical Sciences, Institucio´ Catalana de Recerca i Estudis Avanc¸ats, Barcelona, Spain, 5 Institute for Genomic Biology, University of Illinois, Urbana, Illinois, United States of America Abstract Background: Artificial selection has caused rapid evolution in domesticated species. The identification of selection footprints across domesticated genomes can contribute to uncover the genetic basis of phenotypic diversity. Methodology/Main Findings: Genome wide footprints of pig domestication and selection were identified using massive parallel sequencing of pooled reduced representation libraries (RRL) representing ,2% of the genome from wild boar and four domestic pig breeds (Large White, Landrace, Duroc and Pietrain) which have been under strong selection for muscle development, growth, behavior and coat color. Using specifically developed statistical methods that account for DNA pooling, low mean sequencing depth, and sequencing errors, we provide genome-wide estimates of nucleotide diversity and genetic differentiation in pig. Widespread signals suggestive of positive and balancing selection were found and the strongest signals were observed in Pietrain, one of the breeds most intensively selected for muscle development. Most signals were population-specific but affected genomic regions which harbored genes for common biological categories including coat color, brain development, muscle development, growth, metabolism, olfaction and immunity. -
Livestock Classes Prize Schedule
SCHEDULE SPONSOR CLOSING DATE FOR ENTRIES April 17th LIVESTOCK CLASSES PRIZE SCHEDULE ENTER ONLINE: WWW.RCSENTRIES.CO.UK | TELEPHONE: 01208 812183 HOSTING COMPETITIONS FOR ALPACAS - ANGORA GOATS - CATTLE - SHEEP PIGS - DAIRY GOATS - DONKEYS SHEARING - LIVE LAMB - YFC Visit our website to see our full range of classes and to enter online w w w . d e v o n c o u n t y s h o w . c o . u k CONTENTS PAGE Bye-Laws and Regulations ...................................................................................................................................................... 59 Privacy Policy ............................................................................................................................................................................. 5 Entry Fees ................................................................................................................................................................................... 5 Sponsorship ................................................................................................................................................................................ 6 Membership Application Form .................................................................................................................................................. 8 Provisional Judging Time Tables .............................................................................................................................................. 9 Regulations Cattle ....................................................................................................................................................................................... -
An Introduction to Keeping Pigs
AN CALU FACTSHEET INTRODUCTION June 2010 Ref:040902 TO PIG KEEPING INTRODUCTION UK commercial pig production is based on large herds with around 80% kept in herds of over 1,000 head. The UK breeding herd has contracted over the years to around 300,000 sows. In Wales, pig meat production has never been a major agricultural output and there are relatively few specialist herds in Wales compared to the rest of the UK. In the 10 years up to 2009, the recorded number of breeding sows In Wales dropped from 10,800 to 3,700. The Welsh pig herd of around 20,000 pigs now represents around 0.5% of the UK pig population. There is, however, a resurgence of interest in keeping pigs not only from small-holders and part time farmers but also to fill the usually profitable niche markets demanding specialist pig meat products from older and rare breeds reared less intensively. LEGISLATION Whether you wish to keep a commercial herd or even one pig as a pet you still need to be registered. The details are well covered in the publication - ‘Guide for New Pig keepers’. (Details are given in ‘further information’). This covers registering, movement, record keeping, identification, feed advice and notifiable diseases along with some useful contacts and website links that explain about registering and movement licences INFORMATION AND TRAINING At least a basic knowledge of pig husbandry and welfare should be gained before venturing into pig keeping. There’s plenty of information available from books and the internet, but getting some ‘hands on’ experience is invaluable. -
JEREMY CLARKSON Round the Bend MICHAEL JOSEPH an Imprint of PENGUIN BOOKS
JEREMY CLARKSON Round the Bend MICHAEL JOSEPH an imprint of PENGUIN BOOKS Contents Just a couple of tweaks and it’s an iPhone on wheels Daihatsu Materia It’s far too cool for you, Mr Footballer Mazda MX-5 Roadster Coupé 2.0i Tailor-made for the hard of thinking Subaru Impreza WRX STi Clarkson on road safety Jeremy’s wit and wisdom The rubbish, brilliant saviour of Jaguar Jaguar XF SV8 David Dimbleby made me wet myself Mercedes-Benz CLK Black Series Look, you traffic wombles, I’ve had enough Renaultsport Clio 197 Cup No, princess, you may not have my Fiat Fiat 500 1.2 Pop A mainstay of the car-washing classes Renault Laguna Sport Tourer Dynamique 2.0 Lovely to drive, awful to live with Porsche Cayenne GTS The aristo ruined by the devil’s brew Subaru Legacy Outback TD RE A beauty cursed by travel sickness Callaway Corvette C6 … catch me if you can Mitsubishi Lancer Evolution X FQ-360 GSR Look, mums – a 4×4 planet saver Mitsubishi Outlander 2.2 DI-DC Diamond Press a button and pray it’s the right one Citroën C5 2.7 HDi V6 Exclusive Face lifted, clanger dropped Mercedes-Benz SL 63 AMG So awful even the maker tells you to walk Kia Sedona 2.9 CRDi TS The problem is … it’s out of this world Nissan GT-R Fair Porsche, my sweet Italian lover Boxster RS 60 Spyder Mr Weedy comes up with the goods Mercedes-Benz SL 350 Herr Thruster’s gone all limp and lost BMW M3 convertible It takes you to the edge … and shoves Porsche 911 Carrera GT2 The Devil’s done a fruity one Mercedes SLR McLaren Roadster Eat my dust, Little England Jaguar XKR-S Coupé Calm yourselves, campers Ford Kuga 2.0 TDCi Titanium Très bien – a plumber in a tux Citroën Berlingo Multispace This is an epic car.