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National Monitoring Program for Biodiversity and Non-Indigenous Species in Egypt
UNITED NATIONS ENVIRONMENT PROGRAM MEDITERRANEAN ACTION PLAN REGIONAL ACTIVITY CENTRE FOR SPECIALLY PROTECTED AREAS National monitoring program for biodiversity and non-indigenous species in Egypt PROF. MOUSTAFA M. FOUDA April 2017 1 Study required and financed by: Regional Activity Centre for Specially Protected Areas Boulevard du Leader Yasser Arafat BP 337 1080 Tunis Cedex – Tunisie Responsible of the study: Mehdi Aissi, EcApMEDII Programme officer In charge of the study: Prof. Moustafa M. Fouda Mr. Mohamed Said Abdelwarith Mr. Mahmoud Fawzy Kamel Ministry of Environment, Egyptian Environmental Affairs Agency (EEAA) With the participation of: Name, qualification and original institution of all the participants in the study (field mission or participation of national institutions) 2 TABLE OF CONTENTS page Acknowledgements 4 Preamble 5 Chapter 1: Introduction 9 Chapter 2: Institutional and regulatory aspects 40 Chapter 3: Scientific Aspects 49 Chapter 4: Development of monitoring program 59 Chapter 5: Existing Monitoring Program in Egypt 91 1. Monitoring program for habitat mapping 103 2. Marine MAMMALS monitoring program 109 3. Marine Turtles Monitoring Program 115 4. Monitoring Program for Seabirds 118 5. Non-Indigenous Species Monitoring Program 123 Chapter 6: Implementation / Operational Plan 131 Selected References 133 Annexes 143 3 AKNOWLEGEMENTS We would like to thank RAC/ SPA and EU for providing financial and technical assistances to prepare this monitoring programme. The preparation of this programme was the result of several contacts and interviews with many stakeholders from Government, research institutions, NGOs and fishermen. The author would like to express thanks to all for their support. In addition; we would like to acknowledge all participants who attended the workshop and represented the following institutions: 1. -
DEEP SEA LEBANON RESULTS of the 2016 EXPEDITION EXPLORING SUBMARINE CANYONS Towards Deep-Sea Conservation in Lebanon Project
DEEP SEA LEBANON RESULTS OF THE 2016 EXPEDITION EXPLORING SUBMARINE CANYONS Towards Deep-Sea Conservation in Lebanon Project March 2018 DEEP SEA LEBANON RESULTS OF THE 2016 EXPEDITION EXPLORING SUBMARINE CANYONS Towards Deep-Sea Conservation in Lebanon Project Citation: Aguilar, R., García, S., Perry, A.L., Alvarez, H., Blanco, J., Bitar, G. 2018. 2016 Deep-sea Lebanon Expedition: Exploring Submarine Canyons. Oceana, Madrid. 94 p. DOI: 10.31230/osf.io/34cb9 Based on an official request from Lebanon’s Ministry of Environment back in 2013, Oceana has planned and carried out an expedition to survey Lebanese deep-sea canyons and escarpments. Cover: Cerianthus membranaceus © OCEANA All photos are © OCEANA Index 06 Introduction 11 Methods 16 Results 44 Areas 12 Rov surveys 16 Habitat types 44 Tarablus/Batroun 14 Infaunal surveys 16 Coralligenous habitat 44 Jounieh 14 Oceanographic and rhodolith/maërl 45 St. George beds measurements 46 Beirut 19 Sandy bottoms 15 Data analyses 46 Sayniq 15 Collaborations 20 Sandy-muddy bottoms 20 Rocky bottoms 22 Canyon heads 22 Bathyal muds 24 Species 27 Fishes 29 Crustaceans 30 Echinoderms 31 Cnidarians 36 Sponges 38 Molluscs 40 Bryozoans 40 Brachiopods 42 Tunicates 42 Annelids 42 Foraminifera 42 Algae | Deep sea Lebanon OCEANA 47 Human 50 Discussion and 68 Annex 1 85 Annex 2 impacts conclusions 68 Table A1. List of 85 Methodology for 47 Marine litter 51 Main expedition species identified assesing relative 49 Fisheries findings 84 Table A2. List conservation interest of 49 Other observations 52 Key community of threatened types and their species identified survey areas ecological importanc 84 Figure A1. -
Överklass Crinozoa – Crinozoer KLASS Crinoidea – Liljestjärnor
2 • nationalnyckeln till sveriges flora och fauna ÖVERKLASS Crinozoa – crinozoer STAM Echinodermata ÖVERKLASS Överklassen Crinozoa omfattar tagghudingar vilkas crinozoer. Liljestjärnor utgör den äldsta av de nu le KLASS kropp byggs upp av en bägarlik struktur, calyx, där vande klasserna av tagghudingar och är kända genom ORDNING FAMILJ både mun och analöppning är placerade på översi ungefär 545 miljoner år gamla fossil, dvs. från början SLÄKTE dan. Undersidan (aboralsidan) fäster vid ett underlag, av kambrium. antingen direkt med ett antal ”gripklor” (cirrer) på Fossillagren antyder att crinozoer var en domine calyx eller med en mer eller mindre lång stjälk. Från rande djurgrupp fram till slutet av karbon (för ca 300 calyx övre del utgår fem eller fler armar, som kan vara miljoner år sedan), då många grupper dog ut. Ytterli mer eller mindre rikt förgrenade. gare grupper dog ut i det stora massutdöendet i slutet Förutom den nu levande klassen Crinoidea av perm (för ca 250 miljoner år sedan). (lilje stjärnor) finns åtminstone en utdöd klass av KLASS Crinoidea – liljestjärnor STAM Echinodermata ÖVERKLASS Crinozoa Liljestjärnor är den enda klassen av crinozoer som le Bland dessa finns stjälkade (ca 100) och ostjälkade KLASS ver i dag. Gruppens systematik är omdiskuterad, men (ca 550) arter. De ostjälkade arterna kallas hårstjärnor ORDNING FAMILJ man urskiljer när denna nationalnyckelvolym produ och de stjälkade benämner vi här sjöliljor (ett namn SLÄKTE ceras (2013) åtta ordningar, som inkluderar fler än som ofta har använts för hela gruppen Crino idea), 6 000 beskrivna fossila arter. I vilka av dessa ordning i analogi med engelskans indelning i stjälkade ”sea ar de nu levande ca 650 arterna ska placeras är inte lilies” och ostjälkade ”feather stars”. -
The Gut Microbiome of the Sea Urchin, Lytechinus Variegatus, from Its Natural Habitat Demonstrates Selective Attributes of Micro
FEMS Microbiology Ecology, 92, 2016, fiw146 doi: 10.1093/femsec/fiw146 Advance Access Publication Date: 1 July 2016 Research Article RESEARCH ARTICLE The gut microbiome of the sea urchin, Lytechinus variegatus, from its natural habitat demonstrates selective attributes of microbial taxa and predictive metabolic profiles Joseph A. Hakim1,†, Hyunmin Koo1,†, Ranjit Kumar2, Elliot J. Lefkowitz2,3, Casey D. Morrow4, Mickie L. Powell1, Stephen A. Watts1,∗ and Asim K. Bej1,∗ 1Department of Biology, University of Alabama at Birmingham, 1300 University Blvd, Birmingham, AL 35294, USA, 2Center for Clinical and Translational Sciences, University of Alabama at Birmingham, Birmingham, AL 35294, USA, 3Department of Microbiology, University of Alabama at Birmingham, Birmingham, AL 35294, USA and 4Department of Cell, Developmental and Integrative Biology, University of Alabama at Birmingham, 1918 University Blvd., Birmingham, AL 35294, USA ∗Corresponding authors: Department of Biology, University of Alabama at Birmingham, 1300 University Blvd, CH464, Birmingham, AL 35294-1170, USA. Tel: +1-(205)-934-8308; Fax: +1-(205)-975-6097; E-mail: [email protected]; [email protected] †These authors contributed equally to this work. One sentence summary: This study describes the distribution of microbiota, and their predicted functional attributes, in the gut ecosystem of sea urchin, Lytechinus variegatus, from its natural habitat of Gulf of Mexico. Editor: Julian Marchesi ABSTRACT In this paper, we describe the microbial composition and their predictive metabolic profile in the sea urchin Lytechinus variegatus gut ecosystem along with samples from its habitat by using NextGen amplicon sequencing and downstream bioinformatics analyses. The microbial communities of the gut tissue revealed a near-exclusive abundance of Campylobacteraceae, whereas the pharynx tissue consisted of Tenericutes, followed by Gamma-, Alpha- and Epsilonproteobacteria at approximately equal capacities. -
(Psammechinus Miliaris) and Their Response to Phenanthrene Exposure
Marine Environmental Research xxx (2010) 1e9 Contents lists available at ScienceDirect Marine Environmental Research journal homepage: www.elsevier.com/locate/marenvrev Sex-specific biochemical and histological differences in gonads of sea urchins (Psammechinus miliaris) and their response to phenanthrene exposure Sabine Schäfer*,1, Doris Abele, Ellen Weihe, Angela Köhler Alfred Wegener Institute for Polar and Marine Research within the Helmholtz Association, Am Handelshafen 12, 27570 Bremerhaven, Germany article info abstract Article history: Female and male individuals of the same species often differ with respect to their susceptibility to Received 16 August 2010 toxicant stress. In the present study, sea urchins (Psammechinus miliaris) of both sexes were exposed to À À Received in revised form high (150 mgL 1) and environmentally relevant (5 mgL 1) concentrations of phenanthrene over 10 days. 14 October 2010 À While food intake was significantly decreased following exposure to 150 mgL 1 phenanthrene, histo- Accepted 19 October 2010 logical indices (lipofuscin accumulation, fibrosis, oocyte atresia), energetic status (energy charge, sum adenylates, AMP/ATP ratio) as well as ascorbate levels in the gonads showed either little or no effect upon Keywords: phenanthrene exposure. However, most parameters (vitamin C, energy charge, sum adenylates, AMP/ATP Sea urchin fi fi Gonad ratio, ATP and ADP concentrations, lipofuscin content, brosis) signi cantly differed between male and fi Lipofuscin female animals. This study illustrates the dif culties to identify toxic injury in reproductive tissue as it Energy charge may be superimposed by gametogenesis and spawning of gametes. Phenanthrene Ó 2010 Elsevier Ltd. All rights reserved. Ascorbate Sex-specific differences ATP ATP/AMP ratio Gametogenesis 1. -
Marlin Marine Information Network Information on the Species and Habitats Around the Coasts and Sea of the British Isles
MarLIN Marine Information Network Information on the species and habitats around the coasts and sea of the British Isles Ophiothrix fragilis and/or Ophiocomina nigra brittlestar beds on sublittoral mixed sediment MarLIN – Marine Life Information Network Marine Evidence–based Sensitivity Assessment (MarESA) Review Eliane De-Bastos & Jacqueline Hill 2016-01-28 A report from: The Marine Life Information Network, Marine Biological Association of the United Kingdom. Please note. This MarESA report is a dated version of the online review. Please refer to the website for the most up-to-date version [https://www.marlin.ac.uk/habitats/detail/1068]. All terms and the MarESA methodology are outlined on the website (https://www.marlin.ac.uk) This review can be cited as: De-Bastos, E.S.R. & Hill, J., 2016. [Ophiothrix fragilis] and/or [Ophiocomina nigra] brittlestar beds on sublittoral mixed sediment. In Tyler-Walters H. and Hiscock K. (eds) Marine Life Information Network: Biology and Sensitivity Key Information Reviews, [on-line]. Plymouth: Marine Biological Association of the United Kingdom. DOI https://dx.doi.org/10.17031/marlinhab.1068.1 The information (TEXT ONLY) provided by the Marine Life Information Network (MarLIN) is licensed under a Creative Commons Attribution-Non-Commercial-Share Alike 2.0 UK: England & Wales License. Note that images and other media featured on this page are each governed by their own terms and conditions and they may or may not be available for reuse. Permissions beyond the scope of this license are available here. -
Effect of Diatom Based Biofilms on Paracentrotus Lividus Competent Larvae Marta Castilla-Gavilán, Meshi Reznicov, Vincent Turpin, Priscilla Decottignies, Bruno Cognie
Journal Pre-proof Sea urchin recruitment: Effect of diatom based biofilms on Paracentrotus lividus competent larvae Marta Castilla-Gavilán, Meshi Reznicov, Vincent Turpin, Priscilla Decottignies, Bruno Cognie To cite this version: Marta Castilla-Gavilán, Meshi Reznicov, Vincent Turpin, Priscilla Decottignies, Bruno Cognie. Jour- nal Pre-proof Sea urchin recruitment: Effect of diatom based biofilms on Paracentrotus lividus com- petent larvae. Aquaculture, Elsevier, 2020, 515, pp.734559. 10.1016/j.aquaculture.2019.734559. hal-02378591 HAL Id: hal-02378591 https://hal.archives-ouvertes.fr/hal-02378591 Submitted on 25 Nov 2019 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Journal Pre-proof Sea urchin recruitment: Effect of diatom based biofilms on Paracentrotus lividus competent larvae Marta Castilla-Gavilán, Meshi Reznicov, Vincent Turpin, Priscilla Decottignies, Bruno Cognie PII: S0044-8486(19)31658-8 DOI: https://doi.org/10.1016/j.aquaculture.2019.734559 Reference: AQUA 734559 To appear in: Aquaculture Received Date: 5 July 2019 Revised Date: 13 September 2019 Accepted Date: 1 October 2019 Please cite this article as: Castilla-Gavilán, M., Reznicov, M., Turpin, V., Decottignies, P., Cognie, B., Sea urchin recruitment: Effect of diatom based biofilms on Paracentrotus lividus competent larvae, Aquaculture (2019), doi: https://doi.org/10.1016/j.aquaculture.2019.734559. -
The Marine Fauna of Lundy Ecidnodermata
Rep. Lundy Fld Soc. 29 (1978) THE MARINE FAUNA OF LUNDY ECIDNODERMATA P. A. TYLER Department of Oceanography, University College, Swansea, S. Wales, U.K. INTRODUCTION The five classes of echinoderms are a conspicuous element of the fauna in truly marine areas. The British echinoderm fauna has been treated in detail by Mortensen (1927). In shelf sea areas they are usually found below LWN tide level with occasional species moving up into the littoral zone. Examples of the dominant extant groups are found in all types of substrates, the ophiuroids and the heart urchins being particularly important in the determination of soft substrate benthic communities (Thorson, 1947). SOURCES OF MATERIAL The collections made by divers during marine surveys of Lundy have pro duced a considerable record particularly of the conspicuous epifaunal asteroids, regular echinoids and holothurians. Observations of the less conspicuous in faunal ophiuroids and irregular echinoids have been obtained by divers and by benthic surveys using R.V. 'Ocean Crest'. THE LUNDY FAUNA- GENERAL CONSIDERATIONS To date, 24 species of echinoderm have been recorded around Lundy. Of these species only 8 were recorded by Harvey (1950, 1951) at Lundy. The most noteable exceptions to the fauna are Acrocnida brachiata and Spatangus purpureus, both of which have been found further up the Bristol Channel and may be supposed to be found round Lundy where a suitable substrate exists for these infaunal species. A number of species appear to be common all round the island. These include Asterias rubens, Marthasterias glacia/is, Luidia ciliaris, Echinus esculentus and Holothuria forskali. The very rare sea cucumber Lepto synapta decaria has been reported as occurring round Lundy (Hoare & Wilson, 1976). -
Crinoids, Belonging to the Families Antedonidae and Atelecrinidae
RECENT UNSTALKED CRINOIDS. 129 NOTE XXV. Descriptions of twenty new recent unstalked Crinoids, belonging to the families Antedonidae and Atelecrinidae, from the Dutch East Indies BY Austin+H. Clark The work of the the steamship »Siboga” among islands of the East Indian Archipelago resulted in the discovery of of unstalked many new species crinoids. In view of the amount of in and large work necessary assembling digest- the data ing accumulated on these, and especially on the species already known, it has seemed advisable to publish in advance preliminary diagnoses of the new forms in order to guard against possible anticipation. In the the present paper new species belonging to the families ANTEDONIDAE and ATELECRINIDAE, including among them the most striking of those collected by the »Siboga”, are considered. All of the new species will be described in greater detail and figured in the final memoir on these animals in the »Siboga” series 1). Family ANTEDONIDAE. Antedon moluccana, sp. nov. The centrodorsal is low hemispherical, the bare dorsal with rounded pole very slightly convex an obscure broadly median tubercle surrounded by obsolete cirrus-sockets, 1.5 mm. in diameter. See for the of the Nos f the various 1) explanation 0 page 156. Notes from the Leyden Museum, "Vol. XXXIV. 9 130 RECENT UNSTALKED CRINOIBS 15—17 the The cirri are about XXX, (usually latter), is the longest about 18 mm. long; the first segment very is and to two short, the second one one half times as median the third is from two and long as the diameter, three the -
Antedon Petasus (Fig
The genus Antedon (Crinoidea, Echinodermata): an example of evolution through vicariance Hemery Lenaïg 1, Eléaume Marc 1, Chevaldonné Pierre 2, Dettaï Agnès 3, Améziane Nadia 1 1. Muséum national d'Histoire naturelle, Département des Milieux et Peuplements Aquatiques Introduction UMR 5178 - BOME, CP26, 57 rue Cuvier 75005 Paris, France 2. Centre d’Océanologie de Marseille, Station Marine d’Endoume, CNRS-UMR 6540 DIMAR Chemin de la batterie des Lions 13007 Marseille, France 3. Muséum national d'Histoire naturelle, Département Systématique et Evolution The crinoid genus Antedon is polyphyletic and assigned to the polyphyletic family UMR 7138, CP 26, 57 rue Cuvier 75005 Paris, France Antedonidae (Hemery et al., 2009). This genus includes about sixteen species separated into two distinct groups (Clark & Clark, 1967). One group is distributed in the north-eastern Atlantic and the Mediterranean Sea, the other in the western Pacific. Species from the western Pacific group are more closely related to other non-Antedon species (e.g. Dorometra clymene) from their area than to Antedon species from the Atlantic - Mediterranean zone (Hemery et al., 2009). The morphological identification of Antedon species from the Atlantic - Mediterranean zone is based on skeletal characters (Fig. 1) that are known to display an important phenotypic plasticity which may obscure morphological discontinuities and prevent correct identification of species (Eléaume, 2006). Species from this zone show a geographical structuration probably linked to the events that followed the Messinian salinity crisis, ~ 5 Mya (Krijgsman Discussion et al., 1999). To test this hypothesis, a phylogenetic study of the Antedon species from the Atlantic - The molecular analysis and morphological identifications provide divergent Mediterranean group was conducted using a mitochondrial gene. -
FAU Institutional Repository
FAU Institutional Repository http://purl.fcla.edu/fau/fauir This paper was submitted by the faculty of FAU’s Harbor Branch Oceanographic Institute. Notice: ©1989 Marine Biological Laboratory. The final published version of this manuscript is available at http://www.biolbull.org/. This article may be cited as: Eckelbarger, K. J., Young, C. M., & Cameron, J. L. (1989). Ultrastructure and Development of Dimorphic Sperm in the Abyssal Echinoid Phrissocystis multispina (Echinodermata: Echinoidea): Implications for Deep Sea Reproductive Biology. The Biological Bulletin, 176(3), 257‐271. Reference: BioL Bull. 176: 257—271.(June, 1989) Ultrastructure and Development of Dimorphic Sperm in the Abyssal Echinoid Phrissocystis multispina (Echinodermata: Echinoidea): Implications for Deep Sea Reproductive Biology KEVIN J. ECKELBARGER, CRAIG M. YOUNG, AND J. LANE CAMERON Division ofMarine Sciences, Harbor Branch Oceanographic Institution, 5600 Old Dixie Highway, Fort Pierce, Florida 34946 Abstract. Mature males of the abyssal echinoid Phris et a!., 1982; Tyler, 1988). Until now, however, technol socystis multispina produce two types of sperm includ ogy has restricted the study of deep-sea reproduction ing a euspermatozoon typical of echinoids, and a para largely to the analysis of paraffin sections of preserved spermatozoon, which is bipolar-tailed. The structure of gonads collected from trawls or dredge collections the testis and most features of spermatogenesis are sim (Georgeand Menzies1967,1968;Rokop, 1974,1977; ilar to that of other echinoids. Development of both Ahfeld, 1977; Pain et a!., 1982a, b; Tyler and Gage, 1982, sperm types is identical until the spermatid stage when 1983, 1984; Tyler et al., 1982). Little is known about ga the nucleus ofthe paraspermatozoon undergoes chroma mete structure, fertilization biology, or development of tin reduction. -
Seine Fishing on the Dutch and German Parts of the Dogger Bank, 2013-2019
Wageningen Economic Research The mission of Wageningen University & Research is “To explore the potential P.O. Box 29703 of nature to improve the quality of life”. Under the banner Wageningen University Seine fishing on the Dutch and German 2502 LS Den Haag & Research, Wageningen University and the specialised research institutes of The Netherlands the Wageningen Research Foundation have joined forces in contributing to T +31 (0)70 335 83 30 finding solutions to important questions in the domain of healthy food and living parts of the Dogger Bank, 2013-2019 E [email protected] environment. With its roughly 30 branches, 6,500 employees (5,500 fte) and www.wur.eu/economic-research 12,500 students, Wageningen University & Research is one of the leading Overview of the economic importance and the ecologic impact of the Belgian, British, organisations in its domain. The unique Wageningen approach lies in its integrated Danish, Dutch, French, German and Swedish fleets Report 2020-105 approach to issues and the collaboration between different disciplines. ISBN 978-94-6395-597-3 Katell G. Hamon, Sander Glorius, Arie Klok, Jacqueline Tamis, Ruud Jongbloed Seine fishing on the Dutch and German parts of the Dogger Bank, 2013-2019 Overview of the economic importance and the ecologic impact of the Belgian, British, Danish, Dutch, French, German and Swedish fleets Katell G. Hamon,1 Sander Glorius,2 Arie Klok,1 Jacqueline Tamis,2 Ruud Jongbloed2 1 Wageningen Economic Research 2 Wageningen Marine Research This study was carried out by Wageningen University & Research and subsidised by the Dutch Ministry of Agriculture, Nature and Food Quality within the context of the ‘Natuurinclusieve visserij’ research theme of the Policy Support (project number BO-43-023.02-059) Wageningen University & Research Wageningen, November 2020 REPORT 2020-105 ISBN 978-94-6395-597-3 Hamon, K.G., S.