Patterns of Diversity of Floral Symmetry in Angiosperms: a Case Study of the Order Apiales
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Toward a Resolution of Campanulid Phylogeny, with Special Reference to the Placement of Dipsacales
TAXON 57 (1) • February 2008: 53–65 Winkworth & al. • Campanulid phylogeny MOLECULAR PHYLOGENETICS Toward a resolution of Campanulid phylogeny, with special reference to the placement of Dipsacales Richard C. Winkworth1,2, Johannes Lundberg3 & Michael J. Donoghue4 1 Departamento de Botânica, Instituto de Biociências, Universidade de São Paulo, Caixa Postal 11461–CEP 05422-970, São Paulo, SP, Brazil. [email protected] (author for correspondence) 2 Current address: School of Biology, Chemistry, and Environmental Sciences, University of the South Pacific, Private Bag, Laucala Campus, Suva, Fiji 3 Department of Phanerogamic Botany, The Swedish Museum of Natural History, Box 50007, 104 05 Stockholm, Sweden 4 Department of Ecology & Evolutionary Biology and Peabody Museum of Natural History, Yale University, P.O. Box 208106, New Haven, Connecticut 06520-8106, U.S.A. Broad-scale phylogenetic analyses of the angiosperms and of the Asteridae have failed to confidently resolve relationships among the major lineages of the campanulid Asteridae (i.e., the euasterid II of APG II, 2003). To address this problem we assembled presently available sequences for a core set of 50 taxa, representing the diver- sity of the four largest lineages (Apiales, Aquifoliales, Asterales, Dipsacales) as well as the smaller “unplaced” groups (e.g., Bruniaceae, Paracryphiaceae, Columelliaceae). We constructed four data matrices for phylogenetic analysis: a chloroplast coding matrix (atpB, matK, ndhF, rbcL), a chloroplast non-coding matrix (rps16 intron, trnT-F region, trnV-atpE IGS), a combined chloroplast dataset (all seven chloroplast regions), and a combined genome matrix (seven chloroplast regions plus 18S and 26S rDNA). Bayesian analyses of these datasets using mixed substitution models produced often well-resolved and supported trees. -
Variability of Two Essential Oils of Ammi Visnaga (L.) Lam
Journal of Medicinal Plants Research Vol. 5(20), pp. 5079-5082, 30 September, 2011 Available online at http://www.academicjournals.org/JMPR ISSN 1996-0875 ©2011 Academic Journals Full Length Research Paper Variability of two essential oils of Ammi visnaga (L.) Lam. a traditional Tunisian medicinal plant Ayda Khadhri 1*, Ridha El Mokni 2, Khaled Mguis 3, Inès Ouerfelli 4 and Maria Eduarda M. Araújo 5 1Unity of Research of Vegetal Ecology, Faculty of Sciences, University of El-Manar II, Campus Academia, 2092 Tunis, Tunisia. 2Laboratory of Botany and Plant Ecology, Department of Life Sciences, Faculty of Sciences, University of Carthage, Jarzouna 7021, Bizerta, Tunisia. 3Unité de physiologie et de biochimie de la tolérance au sel chez les plantes, Faculté des Sciences de Tunis, Université Tunis-El-Manar, 2092 Tunis, Tunisie. 4Laboratory of Organic Synthesis and heterocyclic, Department of Chemistry, Faculty of Sciences, University of El-Manar II, Campus Academia, 2092 Tunis, Tunisia. 5CQB, Department of Chemistry and Biochemistry, Faculty of Sciences, University of Lisbon, Edifício C-8, Campo Grande, 1749-016 Lisbon, Portugal. Accepted 9 June, 2011 This study deals with the valorization of medicinal and aromatic plants of the Tunisian flora, in order to find new bioactive natural products. The essential oil constituents from the fruits of Ammi visnaga , collected from two Tunisian localities, Ichkeul and Djebba the North of Tunisia, were extracted by hydrodistillation and analyzed by gas chromatography-mass spectrometry (GC-MS). Forty-one compounds were identified. Both samples showed similar chemical composition, the major components were linalool, isoamyl 2-methyl butyrate and isopentyl isovalerate. Key words: Apiaceae, Ammi visnaga , essential oil composition, Gas chromatography-mass spectrometry (GC-MS) analysis. -
Flowering Plants Eudicots Apiales, Gentianales (Except Rubiaceae)
Edited by K. Kubitzki Volume XV Flowering Plants Eudicots Apiales, Gentianales (except Rubiaceae) Joachim W. Kadereit · Volker Bittrich (Eds.) THE FAMILIES AND GENERA OF VASCULAR PLANTS Edited by K. Kubitzki For further volumes see list at the end of the book and: http://www.springer.com/series/1306 The Families and Genera of Vascular Plants Edited by K. Kubitzki Flowering Plants Á Eudicots XV Apiales, Gentianales (except Rubiaceae) Volume Editors: Joachim W. Kadereit • Volker Bittrich With 85 Figures Editors Joachim W. Kadereit Volker Bittrich Johannes Gutenberg Campinas Universita¨t Mainz Brazil Mainz Germany Series Editor Prof. Dr. Klaus Kubitzki Universita¨t Hamburg Biozentrum Klein-Flottbek und Botanischer Garten 22609 Hamburg Germany The Families and Genera of Vascular Plants ISBN 978-3-319-93604-8 ISBN 978-3-319-93605-5 (eBook) https://doi.org/10.1007/978-3-319-93605-5 Library of Congress Control Number: 2018961008 # Springer International Publishing AG, part of Springer Nature 2018 This work is subject to copyright. All rights are reserved by the Publisher, whether the whole or part of the material is concerned, specifically the rights of translation, reprinting, reuse of illustrations, recitation, broadcasting, reproduction on microfilms or in any other physical way, and transmission or information storage and retrieval, electronic adaptation, computer software, or by similar or dissimilar methodology now known or hereafter developed. The use of general descriptive names, registered names, trademarks, service marks, etc. in this publication does not imply, even in the absence of a specific statement, that such names are exempt from the relevant protective laws and regulations and therefore free for general use. -
184. Liu, M., Plunkett, G.M., Lowry P.P., Van Wyk, B.-E
American Journal of Botany 93(9): 1357–1368. 2006. THE TAXONOMIC VALUE OF FRUIT WING TYPES IN THE ORDER APIALES1 MEI (REBECCA)LIU,2,5 GREGORY M. PLUNKETT,3 PORTER P. LOWRY II,4 BEN-ERIK VAN WYK,2,6 AND PATRICIA M. TILNEY2 2Department of Botany and Plant Biotechnology, University of Johannesburg, P.O. Box 524, Auckland Park, Johannesburg 2006 Republic of South Africa; 3Department of Biology, Virginia Commonwealth University, P.O. Box 842012, Richmond, Virginia 23284 USA; and 4Missouri Botanical Garden, P.O. Box 299, St. Louis, Missouri 63166-0299 USA; De´partement Syste´matique et Evolution (USM 602), Muse´um National d’Histoire Naturelle, CP 39, 57 rue Cuvier, 75213 Paris CEDEX 05, France This study shows that structural data, when carefully examined, can provide valuable characters for delimiting monophyletic groups and can complement DNA with observable features to recognize and circumscribe taxa. In the angiosperm order Apiales, traditional classification has relied heavily (often exclusively) on fruit characters. Recent molecular systematic studies, however, provided a radically different picture of relationships, calling into question the utility of fruit characters. We have studied fruit anatomy from 18 genera (Annesorhiza, Asteriscium, Astrotricha, Choritaenia, Dasispermum, Elaeoselinum, Heptaptera, Hermas, Heteromorpha, Laretia, Molopospermum, Myodocarpus, Pachypleurum, Peucedanum, Polemanniopsis, Polylophium, Rouya, and Tordylium) that represent all major taxonomic groups of Apiales characterized by winged fruits and the full range of wing types. Fruit anatomy closely corresponded with the phylogenetic position of these genera, as suggested by molecular studies. Fruit features of taxonomic importance include developmental origin of the wings, carpel shape, presence of vittae, woodiness of the endocarp, position of crystals, and type of carpophores. -
Five Hundred Plant Species in Gunung Halimun Salak National Park, West Java a Checklist Including Sundanese Names, Distribution and Use
Five hundred plant species in Gunung Halimun Salak National Park, West Java A checklist including Sundanese names, distribution and use Hari Priyadi Gen Takao Irma Rahmawati Bambang Supriyanto Wim Ikbal Nursal Ismail Rahman Five hundred plant species in Gunung Halimun Salak National Park, West Java A checklist including Sundanese names, distribution and use Hari Priyadi Gen Takao Irma Rahmawati Bambang Supriyanto Wim Ikbal Nursal Ismail Rahman © 2010 Center for International Forestry Research. All rights reserved. Printed in Indonesia ISBN: 978-602-8693-22-6 Priyadi, H., Takao, G., Rahmawati, I., Supriyanto, B., Ikbal Nursal, W. and Rahman, I. 2010 Five hundred plant species in Gunung Halimun Salak National Park, West Java: a checklist including Sundanese names, distribution and use. CIFOR, Bogor, Indonesia. Photo credit: Hari Priyadi Layout: Rahadian Danil CIFOR Jl. CIFOR, Situ Gede Bogor Barat 16115 Indonesia T +62 (251) 8622-622 F +62 (251) 8622-100 E [email protected] www.cifor.cgiar.org Center for International Forestry Research (CIFOR) CIFOR advances human wellbeing, environmental conservation and equity by conducting research to inform policies and practices that affect forests in developing countries. CIFOR is one of 15 centres within the Consultative Group on International Agricultural Research (CGIAR). CIFOR’s headquarters are in Bogor, Indonesia. It also has offices in Asia, Africa and South America. | iii Contents Author biographies iv Background v How to use this guide vii Species checklist 1 Index of Sundanese names 159 Index of Latin names 166 References 179 iv | Author biographies Hari Priyadi is a research officer at CIFOR and a doctoral candidate funded by the Fonaso Erasmus Mundus programme of the European Union at Southern Swedish Forest Research Centre, Swedish University of Agricultural Sciences. -
Arthur Monrad Johnson Colletion of Botanical Drawings
http://oac.cdlib.org/findaid/ark:/13030/kt7489r5rb No online items Arthur Monrad Johnson colletion of botanical drawings 1914-1941 Processed by Pat L. Walter. Louise M. Darling Biomedical Library History and Special Collections Division History and Special Collections Division UCLA 12-077 Center for Health Sciences Box 951798 Los Angeles, CA 90095-1798 Phone: 310/825-6940 Fax: 310/825-0465 Email: [email protected] URL: http://www.library.ucla.edu/libraries/biomed/his/ ©2008 The Regents of the University of California. All rights reserved. Arthur Monrad Johnson colletion 48 1 of botanical drawings 1914-1941 Descriptive Summary Title: Arthur Monrad Johnson colletion of botanical drawings, Date (inclusive): 1914-1941 Collection number: 48 Creator: Johnson, Arthur Monrad 1878-1943 Extent: 3 boxes (2.5 linear feet) Repository: University of California, Los Angeles. Library. Louise M. Darling Biomedical Library History and Special Collections Division Los Angeles, California 90095-1490 Abstract: Approximately 1000 botanical drawings, most in pen and black ink on paper, of the structural parts of angiosperms and some gymnosperms, by Arthur Monrad Johnson. Many of the illustrations have been published in the author's scientific publications, such as his "Taxonomy of the Flowering Plants" and articles on the genus Saxifraga. Dr. Johnson was both a respected botanist and an accomplished artist beyond his botanical subjects. Physical location: Collection stored off-site (Southern Regional Library Facility): Advance notice required for access. Language of Material: Collection materials in English Preferred Citation [Identification of item], Arthur Monrad Johnson colletion of botanical drawings (Manuscript collection 48). Louise M. Darling Biomedical Library History and Special Collections Division, University of California, Los Angeles. -
Department of the Interior Fish and Wildlife Service
Thursday, February 27, 2003 Part II Department of the Interior Fish and Wildlife Service 50 CFR Part 17 Endangered and Threatened Wildlife and Plants; Final Designation or Nondesignation of Critical Habitat for 95 Plant Species From the Islands of Kauai and Niihau, HI; Final Rule VerDate Jan<31>2003 13:12 Feb 26, 2003 Jkt 200001 PO 00000 Frm 00001 Fmt 4717 Sfmt 4717 E:\FR\FM\27FER2.SGM 27FER2 9116 Federal Register / Vol. 68, No. 39 / Thursday, February 27, 2003 / Rules and Regulations DEPARTMENT OF THE INTERIOR units designated for the 83 species. This FOR FURTHER INFORMATION CONTACT: Paul critical habitat designation requires the Henson, Field Supervisor, Pacific Fish and Wildlife Service Service to consult under section 7 of the Islands Office at the above address Act with regard to actions carried out, (telephone 808/541–3441; facsimile 50 CFR Part 17 funded, or authorized by a Federal 808/541–3470). agency. Section 4 of the Act requires us SUPPLEMENTARY INFORMATION: RIN 1018–AG71 to consider economic and other relevant impacts when specifying any particular Background Endangered and Threatened Wildlife area as critical habitat. This rule also and Plants; Final Designation or In the Lists of Endangered and determines that designating critical Nondesignation of Critical Habitat for Threatened Plants (50 CFR 17.12), there habitat would not be prudent for seven 95 Plant Species From the Islands of are 95 plant species that, at the time of species. We solicited data and Kauai and Niihau, HI listing, were reported from the islands comments from the public on all aspects of Kauai and/or Niihau (Table 1). -
Recovery Plan for Tyoj5llllt . I-Bland Plants
Recovery Plan for tYOJ5llllt. i-bland Plants RECOVERY PLAN FOR MULTI-ISLAND PLANTS Published by U.S. Fish and Wildlife Service Portland, Oregon Approved: Date: / / As the Nation’s principal conservation agency, the Department of the Interior has responsibility for most ofour nationally owned public lands and natural resources. This includes fostering the wisest use ofour land and water resources, protecting our fish and wildlife, preserving the environmental and cultural values ofour national parks and historical places, and providing for the enjoyment of life through outdoor recreation. The Department assesses our energy and mineral resources and works to assure that their development is in the best interests ofall our people. The Department also has a major responsibility for American Indian reservation communities and for people who live in island Territories under U.S. administration. DISCLAIMER PAGE Recovery plans delineate reasonable actions that are believed to be required to recover and/or protect listed species. Plans are published by the U.S. Fish and Wildlife Service, sometimes prepared with the assistance ofrecovery teams, contractors, State agencies, and others. Objectives will be attained and any necessary funds made available subject to budgetary and other constraints affecting the parties involved, as well as the need to address other priorities. Costs indicated for task implementation and/or time for achievement ofrecovery are only estimates and are subject to change. Recovery plans do not necessarily represent the views nor the official positions or approval ofany individuals or agencies involved in the plan formulation, otherthan the U.S. Fish and Wildlife Service. They represent the official position ofthe U.S. -
Keauhou Bird Conservation Center
KEAUHOU BIRD CONSERVATION CENTER Discovery Forest Restoration Project PO Box 2037 Kamuela, HI 96743 Tel +1 808 776 9900 Fax +1 808 776 9901 Responsible Forester: Nicholas Koch [email protected] +1 808 319 2372 (direct) Table of Contents 1. CLIENT AND PROPERTY INFORMATION .................................................................... 4 1.1. Client ................................................................................................................................................ 4 1.2. Consultant ....................................................................................................................................... 4 2. Executive Summary .................................................................................................. 5 3. Introduction ............................................................................................................. 6 3.1. Site description ............................................................................................................................... 6 3.1.1. Parcel and location .................................................................................................................. 6 3.1.2. Site History ................................................................................................................................ 6 3.2. Plant ecosystems ............................................................................................................................ 6 3.2.1. Hydrology ................................................................................................................................ -
Circumscription and Phylogeny of Apiaceae Subfamily Saniculoideae Based on Chloroplast DNA Sequences
ARTICLE IN PRESS Molecular Phylogenetics and Evolution xxx (2007) xxx–xxx www.elsevier.com/locate/ympev Circumscription and phylogeny of Apiaceae subfamily Saniculoideae based on chloroplast DNA sequences Carolina I. Calviño a,b,¤, Stephen R. Downie a a Department of Plant Biology, University of Illinois at Urbana-Champaign, Urbana, IL 61801-3707, USA b Instituto de Botánica Darwinion, Buenos Aires, Argentina Received 14 July 2006; revised 3 January 2007; accepted 4 January 2007 Abstract An estimate of phylogenetic relationships within Apiaceae subfamily Saniculoideae was inferred using data from the chloroplast DNA trnQ-trnK 5Ј-exon region to clarify the circumscription of the subfamily and to assess the monophyly of its constituent genera. Ninety- one accessions representing 14 genera and 82 species of Apiaceae were examined, including the genera Steganotaenia, Polemanniopsis, and Lichtensteinia which have been traditionally treated in subfamily Apioideae but determined in recent studies to be more closely related to or included within subfamily Saniculoideae. The trnQ-trnK 5Ј-exon region includes two intergenic spacers heretofore underutilized in molecular systematic studies and the rps16 intron. Analyses of these loci permitted an assessment of the relative utility of these noncoding regions (including the use of indel characters) for phylogenetic study at diVerent hierarchical levels. The use of indels in phylogenetic anal- yses of both combined and partitioned data sets improves resolution of relationships, increases bootstrap support values, and decreases levels of overall homoplasy. Intergeneric relationships derived from maximum parsimony, Bayesian, and maximum likelihood analyses, as well as from maximum parsimony analysis of indel data alone, are fully resolved and consistent with one another and generally very well supported. -
Title General Flowering in an Asesonal Tropical Forest : Plant Reproductive Phenology and Plant-Pollinator Interactions in A
General flowering in an asesonal tropical forest : plant Title reproductive phenology and plant-pollinator interactions in a lowland dipterocarp forest in Sarawak( Dissertation_全文 ) Author(s) Sakai, Shoko Citation 京都大学 Issue Date 1999-03-23 URL https://doi.org/10.11501/3149376 Right Type Thesis or Dissertation Textversion author Kyoto University Shoko Sakai 1 Doctoral thesis General flowering in an aseasonal tropical forest: plant reproductive phenology and plant-pollinator interactions in a lowland dipterocarp forest in Sarawak i1-:;r"J'Ji~tt!3"79 1 \t5-:t:t-*1=d=311 ~f®~m~9m"7 I .J o 9-c f@~7ll-~fJJ~t§B:fJ=f§ Shoko SAKAI Fuculty of Science, Kyoto University March 1999 Shoko Sakai 2 CONTENTS Summary 4 Chapter 1. Introduction 6 Chapter 2. Canopy observation system 11 Chapter 3. Plant reproductive phenology 16 Chapter 4. Pollination system in a general flowering period 56 Chapter 5. General discussion 77 Acknowledgments 88 Reference 89 Appendix 99 Shoko Sakai 3 Jttm 7:; 7 ~m~f~:lt!!. 7 7 ;\ tf .:t-w-r: I±, - =for oo:rE e: Df'Jn ~ :m~-IJ\jo G n -c \,t) ~ o -=for 001£ C: I±, 2-10 ifmJM-r:w7Ct ~ f~hX:T ~ :f*4 ~f!Hi-/J\~7 JJ ~Fa, ~:.:J(4 C: 001£ · ~~T ~ ;m~ -r:~ ~ o -: ~:m~ ~~~~ t-:=&IJ, 1992ifiJ" G? v- Y 7 · -IT 7 r:7 71+1 · 7 / ~-Jv00J1.0~ ~=13 v)-c, JE:M89~: 305{i576f~1*~til!fo/J~001E · fffl~15th~~c&~l .. 53'-;fJl-~13-:~-:>t-:= o i-~~ :lf!;, 1992if-IJ"G 19951f:i-r:'±~1tjt~~til!fo/J~~ ~~OO:rEL-cv)~{i, ~~v)l±f~i*~~Uil '±~~: 2-5% C: 1~-/J"-:> t-:=-/J\, f-~~Ui!L± 19961f: 3 JJ iJ" Gf&,Jt~:_t~ L-c 20% ~=~ l, - =foTOO 1E ~ ~c&~ L t-:= o 001E~Uil~ ~1tL± 5 JJ C: 9 Jn: I!- 7 ~ ~--:::> =L1J ~ ~ L t-:: o it-::, - =for 001£ L± 70 ;~-- r Jv ~-: -t~tH*n" G*f'*f~*-?~~ 7 / i -r:~l*~til!fo/J-/J\--:::> < ~ te-t:m~t! e: v) ~-: (: -/)\ b -/)'> -:> t-:= 0 7 7 ;\if .:t- W~fil!fo/J I± i- ~ Li C: lv C:"-/J\j}J!fo/J ~: ~~' ~ {t(fF L-c v) ~ ~ -r:, - =for OO:f£-/J\13-: ~ C:~f;t~~11ff~-/J\f&,~=r'§J < ~~ 0 ttg:I±1Eit?]Jjt~z Lv)w-r:-=foT001E~~~m-~T- ~AiJ\C:"~ J:: ~ 1: 1 iJ" ~ b n -c \,t) ~ ~ iJ"I±, -=for oo:rE ~ &~J <" ~ * ~ ~ rQ~m~ ---:::> -c- ~ ~ o -: n 1 -r: . -
Oral Allergy Syndrome: a Confuence of Immunology and Phylogeny by Merle K
NATIONAL CENTER FOR CASE STUDY TEACHING IN SCIENCE NATIONAL CENTER FOR CASE STUDY TEACHING IN SCIENCE Oral Allergy Syndrome: A Confuence of Immunology and Phylogeny by Merle K. Heidemann, Mike S. Taylor, Amanda Storm, Cassie Dresser-Briggs, Alexa Warwick, and Peter J.T. White Objectives Upon completion of this case study, you should be able to: • Explain the symptoms of allergic reactions in terms of cell biology (immune system cells). • Describe the molecular features of cross reactivity. • Build phylogenetic trees using morphological data. • Build phylogenetic trees using molecular data and interpret two kinds of phylogenetic trees. Part I – Immunology Sam had a history of allergic reactions, including reactions to various plant pollens. Birch pollen elicited a particularly strong reaction, causing him annoying sneezing fts and a sore throat. As he grew to adulthood, he discovered that he was also variably allergic to common foods, including some raw fruits and vegetables, as well as most nuts. Sam was puzzled by his recent food allergies. Also puzzling was the variability in his reactions. He reacted strongly to some foods; others resulted in only a mild itchy throat. He wondered, What exactly causes allergic reactions? Sam was determined to fgure out how and why he reacted to birch pollen and later became allergic to other plant- based food. He also hoped this information might help him avoid other foods that might cause him allergies. First, Sam decided he needed to know something about the cellular bases of allergic reactions. He knew it had some- thing to do with the immune system. He did some basic research on the Internet and here’s what he found: Allergens are bits of protein from an innocuous foreign substance, such as pollen or food.