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Host-Adaptation in Legionellales Is 2.4 Ga, Coincident with Eukaryogenesis
bioRxiv preprint doi: https://doi.org/10.1101/852004; this version posted February 27, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC 4.0 International license. 1 Host-adaptation in Legionellales is 2.4 Ga, 2 coincident with eukaryogenesis 3 4 5 Eric Hugoson1,2, Tea Ammunét1 †, and Lionel Guy1* 6 7 1 Department of Medical Biochemistry and Microbiology, Science for Life Laboratories, 8 Uppsala University, Box 582, 75123 Uppsala, Sweden 9 2 Department of Microbial Population Biology, Max Planck Institute for Evolutionary 10 Biology, D-24306 Plön, Germany 11 † current address: Medical Bioinformatics Centre, Turku Bioscience, University of Turku, 12 Tykistökatu 6A, 20520 Turku, Finland 13 * corresponding author 14 1 bioRxiv preprint doi: https://doi.org/10.1101/852004; this version posted February 27, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC 4.0 International license. 15 Abstract 16 Bacteria adapting to living in a host cell caused the most salient events in the evolution of 17 eukaryotes, namely the seminal fusion with an archaeon 1, and the emergence of both the 18 mitochondrion and the chloroplast 2. A bacterial clade that may hold the key to understanding 19 these events is the deep-branching gammaproteobacterial order Legionellales – containing 20 among others Coxiella and Legionella – of which all known members grow inside eukaryotic 21 cells 3. -
Electronic Laboratory Reporting Use Case January 2011
ILLINOIS HEALTH INFORMATION EXCHANGE Electronic Laboratory Reporting Use Case Electronic Laboratory Reporting and Health Information Exchange Illinois Health Information Exchange Public Health Work Group January 2011 Electronic Laboratory Reporting Use Case January 2011 Table of Contents 1.0 Executive Summary……………………………………………………………………….3 2.0 Introduction…………………………………………………………………...……………..5 3.0 Scope……………………………………..………………………………………………………5 4.0 Use Case Stakeholders…………………………………………………………….….....6 5.0 Issues and Obstacles……………………………………………………………………...8 6.0 Use Case Pre-Conditions .………………….…………………………………………...8 7.0 Use Case Post-Conditions.……………………………………………………………...9 8.0 Detailed Scenarios/Technical Specifications.………………………………10 9.0 Validation and Certification………………………………………………………...12 Appendix ………………………………………………………………………………………….....13 Page 2 Electronic Laboratory Reporting Use Case January 2011 1.0 Executive Summary This Use Case is a product of the Public Health Work Group (PHWG) of the Illinois Health Information Exchange (HIE) Advisory Committee. The Illinois HIE Advisory Committee was constituted as the diverse public healthcare stakeholder body providing input and recommendations on the creation of the Illinois Health Information Exchange Authority (“the Authority”) as the Illinois vehicle for designing and implementing electronic health information exchange in Illinois. The establishment of the Authority marks the formal transition of the work of the HIE Advisory Committee and the Work Groups into alignment with the provisions of Illinois -
Isolation of Legionella Species from Drinking Water
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, OCt. 1984, p. 830-832 Vol. 48, No. 4 0099-2240/84/100830-03$02.00/0 Copyright © 1984, American Society for Microbiology Isolation of Legionella Species from Drinking Water S. C. HSU,* R. MARTIN, AND B. B. WENTWORTH Laboratory and Epidemiological Services Bureau, Lansing, Michigan 48909 Received 7 March 1984/Accepted 25 July 1984 Three different species of Legionella were recovered from samples of water taken from chlorinated public water supplies where no coliform bacteria were simultaneously detected. Five of 856 samples yielded Legionella isolates. Three isolates were identified as Legionella pneumophila serogroup 1, the fourth was identified as Legionella dumoffli, and the fifth was identified as Legionella jordanis. Studies to determine the survival of L. pneumophila Flint 1 serogroup 1 in tap water at various temperatures and in tap water with added sodium hypochlorite were done. These organisms were found to survive for 299 days in tap water at 24 and 5°C but not at 35°C. A concentration of at least 0.2 mg of residual chlorine per ml was required to eliminate at least 90% of L. pneumophila and Escherichia coli inocula in 2 h. Legionella species have been recognized as environmental gionella pneumophila serogroups 1 through 6, Legionella inhabitants, having been found not only in waters from bozemanii, Legionella micdadei, Legionella dumoffli, Le- cooling towers (5, 7, 8) and in plumbing systems of hospitals gionella gormanii, Legionellajordanis, and Legionella long- and hotels (3, 11) but also in natural water such as lakes, beachae serogroups 1 and 2. ponds, and streams (6, 10). -
Front Matter
JOURNAL OF CLINICAL MICROBIOLOGY VOLUME 21 * JUNE 1985 * NUMBER 6 Henry D. Isenberg, Editor in Chief (1989) Herman Friedman, Editor (1985) Peter B. Smith, Editor (1989) Long Island Jewish-Hillside College ofMedicine Centers for Disease Control Medical Center University ofSouth Florida Atlanta, Ga. New Hyde Park, N.Y. Tampa, Fla. Richard C. Tilton, Editor (1989) Steven D. Douglas, Editor (1988) Michael R. McGinnis, Editor (1985) University of Connecticut School of Children's Hospital ofPhiladelphia North Carolina Memorial Hospital Medicine Philadelphia, Pa. Chapel Hill, N.C. Farmington, Conn. Nathalie J. Schmidt, Editor (1985) California Department ofHealth, Berkeley, Calif. EDITORIAL BOARD Donald G. Ahearn (1987) Mario R. Escobar (1986) Victor Lorian (1987) J. Schachter (1986) Libero Ajelo (1985) Richard Facklam (1985) James D. MacLowry (1986) Joseph D. Schwartzman (1985) William L. Albritton (1987) J. J. Farmer (1986) Laurence R. McCarthy (1986) Alexis Shelokov (1985) Daniel Amsterdam (1986) Mary Jane Ferraro (1987) Kenneth McClatchy (1986) Maurice C. Shepard (1985) Ann M. Arvin (1987) Patricia Ferrieri (1986) Joseph E. McDade (1985) David M. Shlaes (1985) Lawrence Ash (1986) Sydney M. Finegold (1985) Jerry R. McGhee (1985) Salman Siddiqui (1987) Arthur L. Barry (1987) James Folds (1987) Joseph L. Melnick (1985) Marcelino F. Sierra (1987) Barry Beaty (1987) Marianne Forsgren (1987) Thomas Mitchell (1987) Robert M. Smibert I (1987) John E. Bennett (1985) Lynn S. Garcia (1986) Josephine A. Morello (1987) James W. Smith (1986) Merlin S. Bergdoll (1985) W. Lance George (1987) Stephen A. Morse (1986) Steven Specter (1986) Jennifer M. Best (1987) Gerald L. Gilardi (1986) C. Wayne Moss (1986) Leslie Spence (1985) E. -
The Role of Lipids in Legionella-Host Interaction
International Journal of Molecular Sciences Review The Role of Lipids in Legionella-Host Interaction Bozena Kowalczyk, Elzbieta Chmiel and Marta Palusinska-Szysz * Department of Genetics and Microbiology, Institute of Biological Sciences, Faculty of Biology and Biotechnology, Maria Curie-Sklodowska University, Akademicka St. 19, 20-033 Lublin, Poland; [email protected] (B.K.); [email protected] (E.C.) * Correspondence: [email protected] Abstract: Legionella are Gram-stain-negative rods associated with water environments: either nat- ural or man-made systems. The inhalation of aerosols containing Legionella bacteria leads to the development of a severe pneumonia termed Legionnaires’ disease. To establish an infection, these bacteria adapt to growth in the hostile environment of the host through the unusual structures of macromolecules that build the cell surface. The outer membrane of the cell envelope is a lipid bilayer with an asymmetric composition mostly of phospholipids in the inner leaflet and lipopolysaccha- rides (LPS) in the outer leaflet. The major membrane-forming phospholipid of Legionella spp. is phosphatidylcholine (PC)—a typical eukaryotic glycerophospholipid. PC synthesis in Legionella cells occurs via two independent pathways: the N-methylation (Pmt) pathway and the Pcs pathway. The utilisation of exogenous choline by Legionella spp. leads to changes in the composition of lipids and proteins, which influences the physicochemical properties of the cell surface. This phenotypic plastic- ity of the Legionella cell envelope determines the mode of interaction with the macrophages, which results in a decrease in the production of proinflammatory cytokines and modulates the interaction with antimicrobial peptides and proteins. The surface-exposed O-chain of Legionella pneumophila sg1 LPS consisting of a homopolymer of 5-acetamidino-7-acetamido-8-O-acetyl-3,5,7,9-tetradeoxy-L- glycero-D-galacto-non-2-ulosonic acid is probably the first component in contact with the host cell that anchors the bacteria in the host membrane. -
Legionella Feeleii: Pneumonia Or Pontiac Fever? Bacterial Virulence Traits and Host Immune Response
Medical Microbiology and Immunology (2019) 208:25–32 https://doi.org/10.1007/s00430-018-0571-0 REVIEW Legionella feeleii: pneumonia or Pontiac fever? Bacterial virulence traits and host immune response Changle Wang1 · Xia Chuai1 · Mei Liang2 Received: 17 July 2018 / Accepted: 27 October 2018 / Published online: 1 November 2018 © Springer-Verlag GmbH Germany, part of Springer Nature 2018 Abstract Gram-negative bacterium Legionella is able to proliferate intracellularly in mammalian host cells and amoeba, which became known in 1976 since they caused a large outbreak of pneumonia. It had been reported that different strains of Legionella pneumophila, Legionella micdadei, Legionella longbeachae, and Legionella feeleii caused human respiratory diseases, which were known as Pontiac fever or Legionnaires’ disease. However, the differences of the virulence traits among the strains of the single species and the pathogenesis of the two diseases that were due to the bacterial virulence factors had not been well elucidated. L. feeleii is an important pathogenic organism in Legionellae, which attracted attention due to cause an outbreak of Pontiac fever in 1981 in Canada. In published researches, it has been found that L. feeleii serogroup 2 (ATCC 35849, LfLD) possess mono-polar flagellum, and L. feeleii serogroup 1 (ATCC 35072, WRLf) could secrete some exopolysaccharide (EPS) materials to the surrounding. Although the virulence of the L. feeleii strain was evidenced that could be promoted, the EPS might be dispensable for the bacteria that caused Pontiac fever. Based on the current knowledge, we focused on bacterial infection in human and murine host cells, intracellular growth, cytopathogenicity, stimulatory capacity of cytokines secre- tion, and pathogenic effects of the EPS ofL. -
CGM-18-001 Perseus Report Update Bacterial Taxonomy Final Errata
report Update of the bacterial taxonomy in the classification lists of COGEM July 2018 COGEM Report CGM 2018-04 Patrick L.J. RÜDELSHEIM & Pascale VAN ROOIJ PERSEUS BVBA Ordering information COGEM report No CGM 2018-04 E-mail: [email protected] Phone: +31-30-274 2777 Postal address: Netherlands Commission on Genetic Modification (COGEM), P.O. Box 578, 3720 AN Bilthoven, The Netherlands Internet Download as pdf-file: http://www.cogem.net → publications → research reports When ordering this report (free of charge), please mention title and number. Advisory Committee The authors gratefully acknowledge the members of the Advisory Committee for the valuable discussions and patience. Chair: Prof. dr. J.P.M. van Putten (Chair of the Medical Veterinary subcommittee of COGEM, Utrecht University) Members: Prof. dr. J.E. Degener (Member of the Medical Veterinary subcommittee of COGEM, University Medical Centre Groningen) Prof. dr. ir. J.D. van Elsas (Member of the Agriculture subcommittee of COGEM, University of Groningen) Dr. Lisette van der Knaap (COGEM-secretariat) Astrid Schulting (COGEM-secretariat) Disclaimer This report was commissioned by COGEM. The contents of this publication are the sole responsibility of the authors and may in no way be taken to represent the views of COGEM. Dit rapport is samengesteld in opdracht van de COGEM. De meningen die in het rapport worden weergegeven, zijn die van de auteurs en weerspiegelen niet noodzakelijkerwijs de mening van de COGEM. 2 | 24 Foreword COGEM advises the Dutch government on classifications of bacteria, and publishes listings of pathogenic and non-pathogenic bacteria that are updated regularly. These lists of bacteria originate from 2011, when COGEM petitioned a research project to evaluate the classifications of bacteria in the former GMO regulation and to supplement this list with bacteria that have been classified by other governmental organizations. -
ESCMID Online Lecture Library © by Author ESCMID Online Lecture Library Latex Agglutination Test
The etiological agent: Legionella pneumophila and other Legionella spp. Valeria Gaia © by author National Reference Centre for Legionella ESCMIDc/o Online Microbiology Lecture laboratory Library Ente Ospedaliero Cantonale Bellinzona - Switzerland © by author ESCMID Online Lecture Library Hystory of Legionnaires’ Disease July 21st 1976 - Philadelphia • 58th Convention of the American Legion at the Bellevue-Stratford Hotel • > 4000 World War II Veterans with families & friends • 600 persons staying at the hotel © by author • ESCMIDJuly 23nd: convention Online closed Lecture Library • Several veterans showed symptoms of pneumonia Searching for the causative agent David Fraser: CDC – Atlanta •Influenza virus? •Nickel intoxication? •Toxin? o 2603 toxicology tests o 5120 microscopy exams o 990 serological tests© by author ESCMIDEverybody seems Online to agree: Lecture it’s NOT a bacterialLibrary disease! July 22nd – August 2nd •High fever •Coughing •Breathing difficulties •Chest pains •Exposed Population =© people by authorstaying in the lobby or outside the Bellevue Stratford Hotel «Broad Street Pneumonia» •221ESCMID persons were Online infected (182+39 Lecture «Broad StreetLibrary Pneumonia» ) 34 patients died (29+5) September 1976-January 1977 Joseph McDade: aims to rule out Q-fever (Rickettsiae) •Injection of “infected” pulmonary tissue in Guinea Pigs microscopy: Cocci and small Bacilli not significant at the time •Inoculation in embryonated eggs + antibiotics to inhibit the growth of contaminating bacteria No growth Microscopy on the -
Rapid Detection of Viable Legionella Pneumophila in Tap Water by a Qpcr and RT-PCR-Based Method
Journal of Applied Microbiology ISSN 1364-5072 ORIGINAL ARTICLE Rapid detection of viable Legionella pneumophila in tap water by a qPCR and RT-PCR-based method R. Boss1 , A. Baumgartner1, S. Kroos2, M. Blattner2, R. Fretz2 and D. Moor1 1 Federal Food Safety and Veterinary Office, Berne, Switzerland 2 Food Safety and Veterinary Office, Canton of Basel-Landschaft, Liestal, Switzerland Keywords Abstract alternative method, Legionella pneumophila, qPCR, rapid, reverse transcription-PCR, rRNA, Aims: A molecular method for a rapid detection of viable Legionella viable, water. pneumophila of all serogroups in tap water samples was developed as an alternative to the reference method (ISO). Legionellae are responsible for Correspondence Legionnaires’ disease, a severe pneumonia in humans with high lethality. Renate Boss and Dominik Moor, Federal Food Methods and Results: The developed method is based on a nutritional Safety and Veterinary Office, Berne, stimulation and detection of an increase in precursor 16S rRNA as an Switzerland. E-mails: [email protected], and indicator for viability. For quantification, DNA was detected by qPCR. This [email protected] method was compared to the ISO method using water samples obtained from public sports facilities in Switzerland. The sensitivity and specificity were 91 2018/0489: received 6 March 2018, revised 4 and 97%, respectively, when testing samples for compliance with a May 2018 and accepted 23 May 2018 microbiological criterion of 1000 cell equivalents per l. Conclusion: The new method is sensitive and specific for Leg. pneumophila doi:10.1111/jam.13932 and allows results to be obtained within 8 h upon arrival, compared to one week or more by the ISO method. -
ID 18 | Issue No: 3 | Issue Date: 14.04.15 | Page: 1 of 21 © Crown Copyright 2015 Identification of Legionella Species
UK Standards for Microbiology Investigations Identification of Legionella species Issued by the Standards Unit, Microbiology Services, PHE Bacteriology – Identification | ID 18 | Issue no: 3 | Issue date: 14.04.15 | Page: 1 of 21 © Crown copyright 2015 Identification of Legionella species Acknowledgments UK Standards for Microbiology Investigations (SMIs) are developed under the auspices of Public Health England (PHE) working in partnership with the National Health Service (NHS), Public Health Wales and with the professional organisations whose logos are displayed below and listed on the website https://www.gov.uk/uk- standards-for-microbiology-investigations-smi-quality-and-consistency-in-clinical- laboratories. SMIs are developed, reviewed and revised by various working groups which are overseen by a steering committee (see https://www.gov.uk/government/groups/standards-for-microbiology-investigations- steering-committee). The contributions of many individuals in clinical, specialist and reference laboratories who have provided information and comments during the development of this document are acknowledged. We are grateful to the Medical Editors for editing the medical content. For further information please contact us at: Standards Unit Microbiology Services Public Health England 61 Colindale Avenue London NW9 5EQ E-mail: [email protected] Website: https://www.gov.uk/uk-standards-for-microbiology-investigations-smi-quality- and-consistency-in-clinical-laboratories PHE Publications gateway number: 2015013 UK Standards for Microbiology Investigations are produced in association with: Logos correct at time of publishing. Bacteriology – Identification | ID 18 | Issue no: 3 | Issue date: 14.04.15 | Page: 2 of 21 UK Standards for Microbiology Investigations | Issued by the Standards Unit, Public Health England Identification of Legionella species Contents ACKNOWLEDGMENTS ......................................................................................................... -
Legionella and Non-Tuberculous Mycobacteria Using MALDI TOF MS (Matrix Assisted Laser Desorption Ionisation Time of Flight Mass Spectrometry)
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by OTHES DIPLOMARBEIT Titel der Diplomarbeit Establishment of a reference database for Acanthamoeba, Legionella and non-tuberculous mycobacteria using MALDI TOF MS (Matrix Assisted Laser Desorption Ionisation Time of Flight Mass Spectrometry) Verfasserin Dzenita HASANACEVIC angestrebter akademischer Grad Magistra der Naturwissenschaften (Mag.rer.nat.) Wien, 2012 Studienkennzahl lt. A 442 Studienblatt: Studienrichtung lt. Studienblatt: Anthropologie Betreuerin: Ass. Prof. Univ. Doz. Mag. Dr. Julia Walochnik Contents 1 ABBREVIATIONS ..................................................................................................... 5 2 INTRODUCTION ....................................................................................................... 6 2.1 Acanthamoeba .................................................................................................... 6 2.1.1 Classification ................................................................................................ 6 2.1.1.1 Phylogeny of Acanthamoeba ................................................................. 6 2.1.1.2 Methods of classification ....................................................................... 8 2.1.2 Ecology and geographical distribution ........................................................ 11 2.1.2.1 Life cycle ............................................................................................. 11 2.1.2.2 Trophozoites ...................................................................................... -
Final Contaminant Candidate List 3 Microbes: Screening to PCCL
Final Contaminant Candidate List 3 Microbes: Screening to the PCCL Office of Water (4607M) EPA 815-R-09-0005 August 2009 www.epa.gov/safewater EPA-OGWDW Final CCL 3 Microbes: EPA 815-R-09-0005 Screening to the PCCL August 2009 Contents Abbreviations and Acronyms ......................................................................................................... 2 1.0 Background and Scope ....................................................................................................... 3 2.0 Recommendations for Screening a Universe of Drinking Water Contaminants to Produce a PCCL.............................................................................................................................. 3 3.0 Definition of Screening Criteria and Rationale for Their Application............................... 5 3.1 Application of Screening Criteria to the Microbial CCL Universe ..........................................8 4.0 Additional Screening Criteria Considered.......................................................................... 9 4.1 Organism Covered by Existing Regulations.............................................................................9 4.1.1 Organisms Covered by Fecal Indicator Monitoring ..............................................................................9 4.1.2 Organisms Covered by Treatment Technique .....................................................................................10 5.0 Data Sources Used for Screening the Microbial CCL 3 Universe ................................... 11 6.0