Recognized Pathogens
Abiotrophia Acremonium alabamensis Aeromonas jandaei Abiotrophia adiacens Acremonium kiliense Aeromonas jandei Abiotrophia adjacens Acremonium potroni Aeromonas media Abiotrophia defectiva Acremonium potronii Aeromonas molluscorum Abiotrophia elegans Acremonium recifei Aeromonas popoffii Acanthamoeba Acremonium strictum Aeromonas punctata Acholeplasma Acrotheca aquaspersa Aeromonas salmonicida Acholeplasma laidlawii Actinobacillus Aeromonas salmonicida achromogenes Acholeplasma oculi Actinobacillus actinomycetemcomitans Aeromonas salmonicida masoucida Achromobacter Actinobacillus equuli Aeromonas salmonicida pectinolytica Achromobacter denitrificans Actinobacillus hominis Aeromonas salmonicida salmonicida Achromobacter piechaudii Actinobacillus lignieresii Aeromonas salmonicida smithia Achromobacter ruhlandii Actinobacillus pseudomallei Aeromonas schubertii Achromobacter xylosoxidans Actinobacillus suis Aeromonas shigelloides Achromobacter xylosoxidans xylosoxidans Actinobacillus ureae Aeromonas simiae Achromobacter, group Vd biotype 1 Actinobaculum Aeromonas sobria Achromobacter, group Vd biotype 2 Actinobaculum massiliae Aeromonas trota Acidaminococcus Actinobaculum massiliense Aeromonas tructi Acidaminococcus fermentans Actinobaculum schaalii Aeromonas veronii Acid‐fast bacillus Actinobaculum urinale Aeromonas veronii biovar sobria Acidovorax Actinomadura Aeromonas veronii biovar veronii Acidovorax delafieldii Actinomadura dassonvillei Afipia Acidovorax facilis Actinomadura latina Afipia clevelandensis Acidovorax temperans Actinomadura madurae Afipia felis Acinetobacter Actinomadura pelletieri Aggregatibacter Acinetobacter anitratus Actinomyces asteroides Aggregatibacter actinomycetemcomitans Acinetobacter baumannii Actinomyces brasiliensis Aggregatibacter aphrophilus Acinetobacter calcoaceticus Actinomyces gonidiaformis Aggregatibacter segnis Acinetobacter calcoaceticus anitratus Actinomyces necrophorus Agrobacterium Acinetobacter calcoaceticus lwoffi Actinomyces ramosus Agrobacterium radiobacter Acinetobacter calcoaceticus lwoffii Adenovirus Agromyces Acinetobacter calcoaceticus‐baumannii complex Aerobacter Alcaligenes Acinetobacter genospecies 3 Aerobacter aerogenes Alcaligenes bronchisepticus Acinetobacter haemolyticus Aerobacter cloacae Alcaligenes denitrificans Acinetobacter hemolyticus Aerobe Alcaligenes faecalis Acinetobacter johnsonii Aeromonas Alcaligenes odorans Acinetobacter junii Aeromonas bestiarum Alcaligenes piechaudii Acinetobacter lwoffi Aeromonas caviae Alcaligenes xylosoxidans Acinetobacter lwoffii Aeromonas caviae complex Alcaligenes xylosoxidans denitrificans Acinetobacter radioresistans Aeromonas encheleia Alcaligenes xylosoxidans xylosoxidans Acinetobacter radioresistens Aeromonas enteropelogenes Aleurisma Acinetobacter schindleri Aeromonas eucrenophila Alishewanella Acinetobacter ursingii Aeromonas eucrenophilia Alishewanella fetalis Acladium castellani Aeromonas hydrophila Alistipes Acremonium Aeromonas hydrophila complex Alistipes putredinis Recognized Pathogens
Allescheria boydii Arcobacter Azospirillum Alloiococcus Arcobacter butzleri Azospirillum brasilense Alloiococcus otitis Arcobacter cryaerophilus B19 virus Alloscardovia Arcobacter nitrofigilis Babesia Alloscardovia omnicolens Arenavirus Babesia microti Alpha non‐hemolytic streptococcus Arginine positive Pseudomonas stutzeri‐like Bacillus abortus Alpha‐hemolytic streptococcus Arizona hinshawii Bacillus anthracis Alternaria Arthrobacter siderocapsulatus Bacillus violaceus Alternaria alternata Arthroderma Bacterium anitratum Alternaria dianthicola Arthrographis Bacterium lacti Alternaria infectoria Ascaris Bacteroides Alternaria tenuis Aspergillus Bacteroides bivius Alternaria tenuissima Aspergillus candidus Bacteroides buccae Alysiella Aspergillus clavatus Bacteroides buccalis Alysiella crassa Aspergillus deflectus Bacteroides caccae Amycolatopsis Aspergillus flavipes Bacteroides capillosus Amycolatopsis orientalis Aspergillus flavus Bacteroides capillus Anaerobe Aspergillus fumigatus Bacteroides clostridiiformis Anaerobic Gram‐negative bacillus Aspergillus glaucus Bacteroides coagulans Anaerobic Gram‐negative coccobacillus Aspergillus nidulans Bacteroides corporis Anaerobic Gram‐negative coccus Aspergillus niger Bacteroides denticola Anaerobic Gram‐positive bacillus Aspergillus niveus Bacteroides disiens Anaerobic Gram‐positive coccobacillus Aspergillus ochraceus Bacteroides distasonis Anaerobic Gram‐positive coccus Aspergillus oryzae Bacteroides eggerthii Anaerobiospirillum Aspergillus parasiticus Bacteroides endodontalis Anaerobiospirillum succiniciproducens Aspergillus restrictus Bacteroides fragilis Anaerobiospirillum succinoproducens Aspergillus sydowii Bacteroides fragilis a Anaerobiospirillum thomasii Aspergillus terreus Bacteroides fragilis fragilis Anaerococcus Aspergillus ustus Bacteroides fragilis group Anaerococcus hydrogenalis Aspergillus versicolor Bacteroides fragilis group 3452A Anaerococcus lactolyticus Aspergillus wentii Bacteroides fragilis ovatus Anaerococcus octavius Asterococcus laidlawii Bacteroides fragilis thetaiotamicron Anaerococcus prevotii Astroviridae Bacteroides fragilis vulgatus Anaerococcus tetradius Atopobium Bacteroides furcosus Anaerococcus tretradius Atopobium fossor Bacteroides gingivalis Anaerococcus vaginalis Atopobium minutum Bacteroides gracilis Anaerorhabdus Atopobium parvulum Bacteroides heparinolyticus Anaerorhabdus furcosus Atopobium rimae Bacteroides hypermegas Anaplasma Atopobium vaginae Bacteroides intermedius Ancylostoma Aureobasidium Bacteroides levii Aneurinibacillus Aureobasidium pullulans Bacteroides macacae Angiostrongylus Averyella Bacteroides melaninogenicus Apophysomyces Avian Influenza A H1N1 Virus Bacteroides melaninogenicus asaccharolyticus Apophysomyces elegans Avian tubercle bacillus Bacteroides melaninogenicus intermedius Arbovirus group B Avibacterium gallinarum Bacteroides merdae Recognized Pathogens
Bacteroides multiacidus Battey bacillus Bordetella Bacteroides necrophorus Beauveria Bordetella avium Bacteroides nodosus Beauveria alba Bordetella bronchiseptica Bacteroides nordii Beauveria bassiana Bordetella hinzii Bacteroides ochraceus Beneckea alginolytica Bordetella holmesii Bacteroides oralis Beneckea harveyi Bordetella parapertussis Bacteroides oris Beneckea parahaemolytica Bordetella pertussis Bacteroides oulorum Beneckea vulnifica Bordetella pertussis rough phase IV Bacteroides ovatus Bergeyella Bordetella petrii Bacteroides pentosaceus Bergeyella zoohelcum Bordetella trematum Bacteroides praeacuta Beta‐hemolytic streptococcus Borrelia Bacteroides praeacutus Beta‐hemolytic Streptococcus, group A Borrelia afzelii Bacteroides putredinis Beta‐hemolytic streptococcus, non‐Group A, non‐Group B Borrelia anserina Bacteroides pyogenes Bifidobacterium Borrelia burgdorferi Bacteroides ruminicola Bifidobacterium adolescentis Borrelia caucasica Bacteroides ruminicola brevis Bifidobacterium angulatum Borrelia coriaceae Bacteroides salivosus Bifidobacterium appendicitis Borrelia crocidurae Bacteroides splanchnicus Bifidobacterium bifidum Borrelia duttoni Bacteroides stercoris Bifidobacterium breve Borrelia duttonii Bacteroides symbiosus Bifidobacterium catenulatum Borrelia garinii Bacteroides tectum Bifidobacterium dentium Borrelia hermsii Bacteroides tectus Bifidobacterium ericksonii Borrelia hispanica Bacteroides thetaiotaomicron Bifidobacterium gallicum Borrelia japonica Bacteroides trichoides Bifidobacterium infantis Borrelia lusitaniae Bacteroides uniformis Bifidobacterium longum Borrelia mazzottii Bacteroides veroralis Bifidobacterium pseudocatenulatum Borrelia miyamotoi Bacteroides vulgatus Bifidobacterium scardovii Borrelia novyi Bacteroides zoogleoformans Bifidobacterium suis Borrelia obermyeri Balantidium Bilophila Borrelia parkeri Balneatrix Bilophila wadsworthia Borrelia recurrentis Balneatrix alpica Bipolaris Borrelia tanukii Bartonella Bipolaris australiensis Borrelia theileri Bartonella bacilliformis Bipolaris hawaiiense Borrelia turicatae Bartonella clarridgeiae Bipolaris hawaiiensis Borrelia valaisiana Bartonella elizabethae Bipolaris spicifera Borrelia venezuelensis Bartonella henselae BK Polyomavirus Botryodiplodia Bartonella quintana Blastoschizomyces Botryodiplodia theobromae Bartonella vinsonii Blastoschizomyces capitatus Bovine tubercle bacillus Bartonella vinsonii arupensis Blastoschizomyces pseudotrichosporon Brachycladium spiciferum Bartonella vinsonii berkhoffii Blautia Brachyspira Basidiobolus Blautia coccoides Brachyspira aalborgi Basidiobolus haptosporus Blautia hansenii Brachyspira pilosicoli Basidiobolus heterosporus Blautia producta Branhamella catarrhalis Basidiobolus meristosporus Boas‐Oppler bacillus Branhamella cuniculi Basidiobolus ranarum Bocavirus Branhamella ovis Recognized Pathogens
Brevundimonas Buttiauxella Campylobacter pyloridis Brevundimonas diminuta Buttiauxella agrestis Campylobacter rectus Brevundimonas vesicularis Buttiauxella brennerae Campylobacter showae Brucella Buttiauxella ferragutiae Campylobacter sputorum Brucella abortus Buttiauxella gaviniae Campylobacter sputorum bubulus Brucella canis Buttiauxella izardii Campylobacter sputorum mucosalis Brucella melitensis Buttiauxella noackiae Campylobacter sputorum sputorum Brucella melitensis biov suis Buttiauxella warmboldiae Campylobacter upsaliensis Brucella melitensis biovar abortus Butyribacterium rettgeri Campylobacter ureolyticus Brucella melitensis biovar canis Butyrivibrio Candida Brucella melitensis biovar neotomae Butyrivibrio fibrisolvens Candida albicans Brucella melitensis biovar ovis Butyrivibrio hungatei Candida albicans var stellatoidea Brucella neotomae Calicivirus Candida auris Brucella ovis California encephalitis virus Candida brumptii Brucella suis Calymmatobacterium Candida candida Budvicia Calymmatobacterium granulomatis Candida catenulata Budvicia aquatica Campylobacter Candida ciferrii Bulleidia Campylobacter butzleri Candida dubliniensis Bulleidia extructa Campylobacter cinaedi Candida famata Bunyaviridae Campylobacter coli Candida glabrata Burkholderia Campylobacter concisus Candida guilliermondii Burkholderia ambifaria Campylobacter cryaerophila Candida guilliermondii var membranaefaciens Burkholderia anthina Campylobacter curvus Candida haemulonii Burkholderia arboris Campylobacter fennelliae Candida inconspicua Burkholderia cenocepacia Campylobacter fetus Candida intermedia Burkholderia cepacia Campylobacter fetus fetus Candida kefyr Burkholderia cepacia complex Campylobacter fetus jejuni Candida krusei Burkholderia cocovenenans Campylobacter fetus venerealis Candida lambica Burkholderia contaminans Campylobacter gracilis Candida lipolytica Burkholderia diffusa Campylobacter helveticus Candida lusitaniae Burkholderia dolosa Campylobacter hominis Candida norvegensis Burkholderia fungorum Campylobacter hyointestinalis Candida obtusa Burkholderia gladioli Campylobacter insulaenigrae Candida parakrusei Burkholderia lata Campylobacter jejuni Candida parapsilosis Burkholderia latens Campylobacter jejuni doylei Candida parapsilosis var obtusa Burkholderia mallei Campylobacter jejuni jejuni Candida pararugosa Burkholderia metallica Campylobacter lanienae Candida paratropicalis Burkholderia multivorans Campylobacter lari Candida pelliculosa Burkholderia pickettii Campylobacter laridis Candida pintolopesii Burkholderia pseudomallei Campylobacter mucosalis Candida pulcherrima Burkholderia pyrrocinia Campylobacter mustelae Candida ravautii Burkholderia stabilis Campylobacter nitrofigilis Candida rugosa Burkholderia thailandensis Campylobacter pylori Candida sake Burkholderia ubonensis Campylobacter pylori mustelae Candida slooffii Burkholderia vietnamensis Campylobacter pylori pylori Candida stellatoidea Recognized Pathogens
Candida tropicalis CDC group Iib Chlamydia pneumoniae Candida utilis CDC group IIe Chlamydia psittaci Candida vini CDC group IIf Chlamydia trachomatis Candida viswanathii CDC group IIh Chlamydia TWAR Candida zeylanoides CDC group IIi Chlamydophila Capnocytophaga CDC group IIk‐1 Chlamydophila abortus Capnocytophaga canimorsus CDC group IIk‐2 Chlamydophila pneumoniae Capnocytophaga cynodegmi CDC group IIk‐3 Chlamydophila psittaci Capnocytophaga gingivalis CDC group IVa Chromobacterium Capnocytophaga granulosa CDC group IVc‐2 Chromobacterium janthinum Capnocytophaga hemolytica CDC group IVe Chromobacterium violaceum Capnocytophaga ochracea CDC group M‐3 Chryseobacterium Capnocytophaga sputigena CDC group M‐4 Chryseobacterium gleum carbapenem resistant Acinetobacter CDC group M‐5 Chryseobacterium indologenes carbapenem resistant Enterobacter cloacae CDC group M‐6 Chryseomonas carbapenem resistant Klebsiella pneumoniae CDC group P‐1 Chryseomonas luteola Cardiobacterium CDC group TM‐1 Chryseomonas polytricha Cardiobacterium hominis CDC group Vb‐1 Chrysosporium Cardiobacterium valvarum CDC group Vb‐2 Citrobacter Catenibacterium CDC Group Vb‐3 Citrobacter amalonaticus Catenibacterium mitsuokai CDC group Vc Citrobacter amalonaticus, biogroup 1 Catonella CDC group Vd‐1 Citrobacter braakii Catonella morbi CDC group Ve‐1 Citrobacter diversus CDC EF‐19 CDC Nonoxidizer group 2 Citrobacter farmeri CDC Enteric group 10 Cedecea Citrobacter freundii CDC Enteric group 15 Cedecea davisae Citrobacter gillenii CDC Enteric group 17 Cedecea lapagei Citrobacter koseri CDC Enteric group 45 Cedecea neteri Citrobacter murliniae CDC Enteric group 46 Cedecea species 3 Citrobacter rodentium CDC Enteric group 57 Cedecea species 4 Citrobacter sedlakii CDC Enteric Group 58 Cedecea species 5 Citrobacter werkmanii CDC Enteric group 75 Centipeda Citrobacter youngae CDC Enteric group 90 Centipeda periodontii Cladophialophora CDC group DF‐1 Cephalosporium Cladophialophora bantiana CDC group DF‐2 Cephalosporium kiliense Cladosporium CDC group DF‐2‐like Cephalosporium potronii Cladosporium cladosporioides CDC group DF‐3 Cephalosporium recifei Cladosporium herbarum CDC group E9 Cephalosporium strictum Cladosporium sphaerospermum CDC group EF22 Chaetomium Cladosporium werneckii CDC group EF26 Chaetomium atrobrunneum Cloaca cloacae CDC group EF‐4b Chaetomium globosum Clostridium CDC group EF5 Chikungunya virus Clostridium absonum CDC Group EO‐2 Chilomastix Clostridium argentiense CDC group HB‐1 Chilomastix mesnili Clostridium argentinense CDC group Iia Chlamydia Clostridium barati Recognized Pathogens
Clostridium baratii Clostridium novyi, type B Contagious ecthyma virus Clostridium barkeri Clostridium oedematiens Contagious pustular dermatitis virus Clostridium bartlettii Clostridium orbiscindens Coprococcus Clostridium bifermentans Clostridium oroticum Coprococcus eutactus Clostridium bolteae Clostridium paraperfringens Coronavirus Clostridium botulinum Clostridium paraputrificum Corynebacterium diphtheriae Clostridium botulinum group G Clostridium perenne Corynebacterium vaginale Clostridium botulinum, type A Clostridium perfringens Coxiella Clostridium botulinum, type E Clostridium pseudofallax Coxiella burnetii Clostridium botulinum, type F Clostridium pseudotetanicum Creutzfeldt‐Jakob agent Clostridium butyricum Clostridium putrefaciens Creutzfeldt‐Jakob disease agent Clostridium cadaveris Clostridium ramosum Crimean‐Congo hemorrhagic fever virus Clostridium carnis Clostridium sardiniense Cronobacter Clostridium celerecrescens Clostridium sardiniensis Cronobacter dublinensis Clostridium clostridioforme Clostridium septicum Cronobacter malonaticus Clostridium cochlearium Clostridium sordellii Cronobacter muytjensii Clostridium cocleatum Clostridium sphenoides Cronobacter sakazakii Clostridium difficile Clostridium spiroforme Cronobacter turicensis Clostridium difficilis Clostridium sporogenes Cryptobacterium Clostridium disporicum Clostridium sporosphaeroides Cryptobacterium curtum Clostridium edematiens (OT) Clostridium subterminale Cryptococcus aggregatus Clostridium edematiens, type A Clostridium symbiosum Cryptosporidium Clostridium edematiens, type B Clostridium tertium Cryptosporidium hominis Clostridium fallax Clostridium tetani Cryptosporidium parvum Clostridium ghoni Clostridium villosum Cunninghamella Clostridium ghonii Clostridium welchii Cunninghamella bertholletiae Clostridium glycolicum Cokeromyces Cupriavidus Clostridium haemolyticum Cokeromyces recurvatus Cupriavidus basilensis Clostridium hastiforme Coliform bacteria Cupriavidus gilardii Clostridium hathewayi Collinsella Cupriavidus metallidurans Clostridium hemolyticum Collinsella aerofaciens Cupriavidus necator Clostridium histolyticum Collinsella intestinalis Cupriavidus pauculus Clostridium indolis Collinsella stercoris Cupriavidus respiraculi Clostridium innocuum Colobactrum freundii Curvularia Clostridium intestinale Colorado tick fever virus Curvularia geniculata Clostridium intestinalis Comamonas Curvularia lunata Clostridium irregulare Comamonas acidovorans Curvularia speciferum Clostridium irregularis Comamonas aquatica Curvularia spicifera Clostridium lentoputrescens Comamonas kerstersii Cyclospora Clostridium leptum Comamonas terrigena Cyclospora cayetanensis Clostridium limosum Comamonas testosteroni Cysticercus Clostridium malenominatum Conidiobolus Cytophaga heparina Clostridium novyi Conidiobolus coronatus Dactylaria constricta Clostridium novyi type D Conidiobolus incongruus Dactylaria constricta var gallopava Clostridium novyi, type A Coniothyrium Delftia Recognized Pathogens
Delftia acidovorans Ebolavirus Enterobacter cloacae complex Delta hepatitis viral agent Echinococcus Enterobacter cowanii Dengue virus Edmonston virus Enterobacter dissolvens Dermatophilus Edwardsiella Enterobacter gergoviae Dermatophilus congolensis Edwardsiella anguillimortifera Enterobacter hafniae Dermatophilus pedis Edwardsiella hoshinae Enterobacter hormaechei Desulfomonas Edwardsiella ictaluri Enterobacter hormaechi Desulfomonas pigra Edwardsiella tarda Enterobacter intermedium Desulfovibrio Edwardsiella tarda, biogroup 1 Enterobacter intermedius Desulfovibrio desulfuricans Eelworm Enterobacter kobei Desulfovibrio piger EF‐4 Enterobacter liquefaciens Desulfovibrio vulgaris Eggerthella Enterobacter ludwigii Dialister Eggerthella lenta Enterobacter nimipressuralis Dialister micraerophilus Eggerthella sinesis Enterobacter pyrinus Dialister pneumonsintes Eggerthia catenaformis Enterobacteriaceae Dialister pneumosintes EHEC, serotype O157:H7 Enterobius Dibothriocephalus Ehrlichia Enterococcus Dichelobacter Eikenella Enterococcus asini Dichelobacter nodosus Eikenella corrodens Enterococcus avium Dientamoeba Elizabethkingia Enterococcus canis Dientamoeba fragilis Elizabethkingia meningoseptica Enterococcus casseliflavus Dimorphic fungi Emmonsia Enterococcus cecorum Diphtheria bacillus Empedobacter Enterococcus dispar Diphyllobothrium Empedobacter brevis Enterococcus durans Diplococcus pneumoniae Endolimax Enterococcus faecalis Dipodascus capitatus Endolimax nana Enterococcus faecium Dipylidium Entamoeba Enterococcus flavescens Doderlein's bacillus Entamoeba coli Enterococcus gallinarum Dolosicoccus Entamoeba dispar Enterococcus gilvus Dolosicoccus paucivorans Entamoeba gingivalis Enterococcus haemoperoxidus Dolosigranulum Entamoeba hartmanni Enterococcus hermanniensis Dolosigranulum pigrum Entamoeba histolytica Enterococcus hirae Dorea Entamoeba histolytica/dispar Enterococcus italicus Dorea formicigenerans Entamoeba polecki Enterococcus malodoratus Dorea longicatena Enteric bacteria Enterococcus moraviensis Drechslera Enterobacter Enterococcus mundtii Drechslera australiensis Enterobacter aerogenes Enterococcus pallens Drechslera halodes Enterobacter agglomerans Enterococcus phoeniculicola Drechslera hawaiiensis Enterobacter agglomerans group Enterococcus pseudoavium Drechslera rostrata Enterobacter amnigenus Enterococcus raffinosus Drechslera spicifera Enterobacter amnigenus biogroup I Enterococcus ratti Dysgonomonas Enterobacter amnigenus biogroup II Enterococcus saccharolyticus Dysgonomonas capnocytophagoides Enterobacter asburiae Enterococcus saccharominimus Dysgonomonas gadei Enterobacter cancerogenus Enterococcus seriolicida Eastern equine encephalitis virus Enterobacter cloacae Enterococcus solitarius Recognized Pathogens
Enterococcus sulfureus Eubacterium budayi Extended spectrum beta‐lactamase producing Klebsiella oxytoca Enterococcus villorum Eubacterium cadaveris Extended spectrum beta‐lactamase producing Klebsiella pneumoniae Enterocytozoon Eubacterium callanderi Extended spectrum beta‐lactamase producing Proteus mirabilis Enterohemorrhagic Escherichia coli, serotype O157:H7 Eubacterium combesii Extended spectrum beta‐lactamase producing Shigella sonnei Enteromonas Eubacterium contortum Facklamia Enteromonas hominis Eubacterium cylindroides Facklamia hominis Enteropathogenic Escherichia coli Eubacterium dolichum Facklamia ignava Enterovirus Eubacterium eligens Facklamia languida Enterovirus type 72 Eubacterium exiguum Facklamia sourekii Entomophthora Eubacterium filamentosum Facklamia tabacinasalis Entomophthora coronata Eubacterium fossor Faecalibacterium Epicoccum Eubacterium hadrum Faecalibacterium prausnitzii Epidermophyton Eubacterium hallii Falcivibrio Epstein‐Barr virus Eubacterium infirmum Falcivibrio grandis Erwinia Eubacterium lentum Falcivibrio vaginalis Erwinia ananas Eubacterium limosum Family Orthomyxoviridae Erwinia cancerogena Eubacterium minutum Fifth disease virus Erwinia dissolvens Eubacterium moniliforme Filifactor Erwinia herbicola‐Enterobacter agglomerans group Eubacterium nitrogenes Filifactor alocis Erwinia nimipressuralis Eubacterium nodatum Filifactor villosus Erwinia persicina Eubacterium plautii Finegoldia Erwinia uredovora Eubacterium ramosum Finegoldia magna Erysipelothrix Eubacterium ramulus Fissuricella filamenta Erysipelothrix inopinata Eubacterium rectale Flavimonas oryzihabitans Erysipelothrix insidiosa Eubacterium saburreum Flavivirus Erysipelothrix rhusiopathiae Eubacterium saphenum Flavobacterium Erysipelothrix tonsillarum Eubacterium siraeum Flavobacterium aureum Erythema infectiosum virus Eubacterium sulci Flavobacterium breve Erythrovirus B19 Eubacterium tenue Flavobacterium devorans Escherichia Eubacterium timidum Flavobacterium gleum Escherichia adecarboxylata Eubacterium ventriosum Flavobacterium group IIe Escherichia albertii Eubacterium yurii Flavobacterium group IIh Escherichia blattae Ewingella Flavobacterium heparinum Escherichia coli Ewingella americana Flavobacterium indologenes Escherichia coli, inactive Exophiala Flavobacterium meningosepticum Escherichia fergusonii Exophiala bergeri Flavobacterium mitzutaii Escherichia freundii Exophiala dermatitidis Flavobacterium multivorum Escherichia hermannii Exophiala jeanselmei Flavobacterium odoratum Escherichia vulneris Exophiala spinifera Flavobacterium paucimobilis Eubacterium Exophiala werneckii Flavobacterium pseudomallei Eubacterium aerofaciens Exserohilum Flavobacterium species group IIi Eubacterium alactolyticum Exserohilum rostratum Flavobacterium spiritivorum Eubacterium barkeri Extended spectrum beta‐lactamase producing Citrobacter freundii Flavobacterium thalpophilum Eubacterium biforme Extended spectrum beta‐lactamase producing Enterobacter cloacae Flavobacterium yabuuchiae Eubacterium brachy Extended spectrum beta‐lactamase producing Escherichia coli Flavobacterium, group IIf Recognized Pathogens
Flavonifractor Fusobacterium necrogenes Globicatella sanguinis Flavonifractor plautii Fusobacterium necrophorum Globicatella sulfidifaciens Flexner‐Strong bacillus Fusobacterium necrophorum fundiliforme Gonococcus Fluoribacter Fusobacterium necrophorum necrophorum Grahamella Fluoribacter bozemanae Fusobacterium nucleatum Gram‐negative bacillus Fluoribacter dumoffii Fusobacterium nucleatum fusiforme Gram‐negative bacillus, fermentative Fluoribacter gormanii Fusobacterium nucleatum nucleatum Gram‐negative bacillus, non‐fermentative Fonsecaea Fusobacterium nucleatum polymorphum Gram‐negative coccobacillus Fonsecaea compacta Fusobacterium periodonticum Gram‐negative coccus Fonsecaea compactum Fusobacterium planti‐vincenti Gram‐negative diplococcus Fonsecaea dermatitidis Fusobacterium plauti Gram‐negative pleomorphic bacillus Fonsecaea pedrosoi Fusobacterium polymorphum Gram‐positive bacillus Francisella Fusobacterium prausnitzii Gram‐positive coccobacillus Francisella tularensis Fusobacterium russii Gram‐positive coccus Friedlander's bacillus Fusobacterium sulci Gram‐positive diplococcus Frog tubercle bacillus Fusobacterium symbiosum Gram‐variable bacillus Fungus Fusobacterium ulcerans Gram‐variable coccobacillus Fusarium Fusobacterium varium Gram‐variable coccus Fusarium chlamydosporum Gallicola Granulicatella Fusarium culmorum Gallicola barnesae Granulicatella adiacens Fusarium dimerum Gamma‐hemolytic streptococcus Granulicatella elegans Fusarium graminearum Gardnerella Graphium Fusarium javanicum Gardnerella vaginalis Grimontia Fusarium moniforme var intermedium Gas bacillus Grimontia hollisae Fusarium moniliforme Gemella Group 1 photochromogen Fusarium oxysporum Gemella bergeriae Group B streptococcus Fusarium poae Gemella haemolysans Haemophilus Fusarium proliferatum Gemella hemolysans Haemophilus actinomycetemcomitans Fusarium roseum Gemella morbillorum Haemophilus aegyptius Fusarium semitectum Gemella sanguinis Haemophilus aphrophilus Fusarium solani Geobacillus Haemophilus canis Fusarium sporotrichioides Geobacillus stearothermophilus Haemophilus ducreyi Fusarium tricinctum Geobacillus thermodenitrificans Haemophilus haemoglobinophilus Fusarium tricintum Geotrichum Haemophilus haemolyticus Fusarium verticillioides Geotrichum candidum Haemophilus influenzae Fusiformis fusiformis Geotrichum capitatum Haemophilus influenzae type a Fusobacterium Geotrichum capitum Haemophilus influenzae type b Fusobacterium alocis Geotrichum klebahnii Haemophilus influenzae, biotype I Fusobacterium biacutus German measles virus Haemophilus influenzae, biotype II Fusobacterium canifelinum Giardia Haemophilus influenzae, biotype III Fusobacterium equinum Giardia intestinalis Haemophilus influenzae, biotype IV Fusobacterium fusiforme Giardia lamblia Haemophilus influenzae, biotype V Fusobacterium gonidiaformans Glenosporella Haemophilus influenzae, biotype VI Fusobacterium mortiferum Gliocladium Haemophilus influenzae, biotype VII Fusobacterium naviforme Globicatella Haemophilus influenzae, biotype VIII Recognized Pathogens
Haemophilus influenzae, not b Helicobacter mustelae Human Glanders bacillus Haemophilus parahaemolyticus Helicobacter nemestrinae Human herpes simplex virus Haemophilus parainfluenzae Helicobacter pametensis Human herpes simplex virus type 1 Haemophilus parainfluenzae, biotype I Helicobacter pullorum Human herpes simplex virus type 2 Haemophilus parainfluenzae, biotype II Helicobacter pylori Human herpesvirus 3 Haemophilus parainfluenzae, biotype III Helicobacter rappini Human herpesvirus 4 Haemophilus parainfluenzae, biotype IV Helicobacter rodentium Human Herpesvirus 6 Haemophilus parainfluenzae, biotype V Helicobacter salomonis Human Herpesvirus 8 Haemophilus parainfluenzae, biotype VI Helicobacter trogontum Human immunodeficiency virus type 2 Haemophilus parainfluenzae, biotype VII Helicobacter typhlonius Human immunodeficiency virus type I Haemophilus parainfluenzae, biotype VIII Helminthosporium Human metapneumovirus Haemophilus paraphrophilus Helminthosporium australiensis Human papillomavirus Haemophilus pittmaniae Helminthosporium halodes Human parainfluenza viruses Haemophilus segnis Helminthosporium hawaiiensis Human parvovirus B19 Hafnia Helminthosporium rostratum Human poliovirus Hafnia alvei Helminthosporium spiciferum Human polyomavirus BK Hafnia alvei biogroup I Hemophilus bovis Human respiratory syncytial virus Halomonas Hemophilus pertussis Human rhinovirus Halomonas venusta Hemophilus vaginalis Human T‐lymphotropic virus 1 Hansen's bacillus Hepatitis A virus Human T‐lymphotropic virus 2 Hansenula angusta Hepatitis B virus Hydatigera Hansenula anomala Hepatitis C virus Hymenolepis Hansenula polymorpha Hepatitis D virus Ignavigranum Hartmannella Hepatitis E virus Ignavigranum ruoffiae Haverhillia moniliformis Hepatitis G virus Influenza A (H1N1) virus Haverhillia multiformis Herbaspirillum Influenza A virus Helcococcus Herellea vaginicola Influenza A virus subtype H1N1 Helcococcus kunzii Herpesviridae Influenza B virus Helcococcus sueciensis Herpesvirus Influenza C virus Helicobacter Heterophyes Influenzavirus group Helicobacter acinonychis Heterophyes heterophyes Influenzavirus type A, avian, H1N1 strain Helicobacter acinonyx Holdemania Inquilinus Helicobacter aurati Holdemania filiformis Inquilinus limosus Helicobacter bilis Hormiscium dermatitidis Isospora Helicobacter bizzozeroni Hormodendrum JC virus Helicobacter canadensis Hormodendrum dermatitidis Johne's bacillus Helicobacter canis Hormonema Jonesia Helicobacter cholecystus Hormonema dermatoides Jonesia denitrificans Helicobacter cinaedi Hortaea werneckii Kerstersia Helicobacter felis Human (beta) herpes virus 5 Kerstersia gyiorum Helicobacter fennelliae Human coxsackievirus Kingella Helicobacter ganmani Human coxsackievirus A Kingella denitrificans Helicobacter hepaticus Human coxsackievirus B Kingella indologenes Helicobacter mesocricetorum Human cytomegalovirus 5 Kingella kingae Helicobacter muridarum Human echovirus Kingella orale Recognized Pathogens
Kingella oralis Lactobacillus catenaforme Legionella cherrii Kingella potus Lactobacillus catenaformis Legionella cincinnatiensis Kitasatoa Lactobacillus cellobiosus Legionella drancourtii Klebsiella Lactobacillus confusus Legionella drozanskii Klebsiella aerogenes Lactobacillus crispatus Legionella dumoffii Klebsiella granulomatis Lactobacillus delbrueckii Legionella erythra Klebsiella ornithinolytica Lactobacillus fermentum Legionella fairfieldensis Klebsiella oxytoca Lactobacillus gasseri Legionella fallonii Klebsiella ozaenae Lactobacillus gastricus Legionella feeleii Klebsiella planticola Lactobacillus iners Legionella geestiae Klebsiella pneumoniae Lactobacillus jensenii Legionella geestiana Klebsiella pneumoniae ozaenae Lactobacillus johnsonii Legionella gormanii Klebsiella pneumoniae pneumoniae Lactobacillus kalixensis Legionella hackeliae Klebsiella pneumoniae rhinoscleromatis Lactobacillus minutus Legionella israelensis Klebsiella rhinoscleromatis Lactobacillus oris Legionella jamestowniensis Klebsiella singaporensis Lactobacillus paracasei Legionella janestowniensis Klebsiella terrigena Lactobacillus plantarum Legionella jordanis Klebsiella trevisanii Lactobacillus reuteri Legionella lansingensis Klebsiella variicola Lactobacillus rhamnosus Legionella londiniensis Klebs‐Loeffler bacillus Lactobacillus rimae Legionella londoniensis Kloeckera Lactobacillus sakei Legionella longbeachae Kluyvera Lactobacillus salivarius Legionella lytica Kluyvera ascorbata Lactobacillus uli Legionella maceachernii Kluyvera cryocrescens Lactobacillus ultunensis Legionella micdadei Kluyvera georgiana Lactobacillus vaginalis Legionella moravica Kluyvera intermedia Lactobacillus vitulinus Legionella nautarum Kluyveromyces Lactococcus Legionella oakridgensis Kluyveromyces fragilis Lactococcus garvieae Legionella parisiensis Kluyveromyces lactis Lactococcus lactis Legionella pittsburghensis Kluyveromyces marxianus Lasiodiplodia Legionella pneumophila Koch‐Weeks bacillus Lasiodiplodia theobromae Legionella quateirensis Kodamaea Lassa virus Legionella quateriensis Kodamaea ohmeri Leclercia Legionella quinlivanii Koserella Leclercia adecarboxylata Legionella rowbothamii Koserella trabulsii Lecythophora Legionella rubrilucens Kurthia Lecythophora hoffmannii Legionella sainthelens Kurthia bessoni Lecythophora mutabilis Legionella sainthelensi Lactobacillus Legionella Legionella santicrucis Lactobacillus acidophilus Legionella adelaidensis Legionella shakespearei Lactobacillus amylovorus Legionella anisa Legionella spiritensis Lactobacillus antri Legionella beliardensis Legionella steigerwaltii Lactobacillus arizonensis Legionella birminghamensis Legionella taurinensis Lactobacillus brevis Legionella bozemanae Legionella tucsonensis Lactobacillus buchneri Legionella brunensis Legionella wadsworthii Lactobacillus casei Legionella busanensis Legionella waltersii Recognized Pathogens
Legionella worsleiensis Listeria welshimeri Methylobacterium zatmanii Legionella worsliensis Listonella Micrococcus catarrhalis Leishmania Loboa Micrococcus cinereus Leminorella Lucibacterium harveyi Micrococcus cryophilus Leminorella grimontii Lymphocytic choriomeningitis virus Micrococcus halobius Leminorella richardii Lymphocytic choriomeningitis virus group Micrococcus melitensis Leprosy bacillus Lymphogranuloma venereum virus Micrococcus niger Leptosphaeria Macrococcus Micrococcus pyogenes var aureus Leptosphaeria senegalensis Macrococcus bovicus Micromonas micros Leptosphaeria tompkinsii Macrococcus carouselicus Micropolyspora brevicatena Leptospira Macrococcus caseolyticus Microsporidium Leptospira Autumnalis Macrococcus equipercicus Microsporum Leptospira Ballum Macrosporium Microsporum brachytomum Leptospira Bataviae Madurella Mima polymorpha Leptospira Canicola Madurella grisea Mitsuokella Leptospira Grippotyphosa Madurella mycetomatis Mitsuokella dentalis Leptospira Icterohaemorrhagiae Madurella mycetomi Mitsuokella multacida Leptospira interrogans Magnusiomyces capitatus Mitsuokella multiacidus Leptospira interrogans serogroup Autumnalis Malassezia Miyagawanella ornithosis virus Leptospira interrogans serogroup Ballum Malassezia furfur Mobiluncus Leptospira interrogans, serogroup Bataviae Malassezia globosa Mobiluncus curtisii Leptospira interrogans, serogroup Canicola Malassezia ovale Mobiluncus mulieris Leptospira interrogans, serogroup Grippotyphosa Malassezia pachydermatis Moellerella Leptospira interrogans, serogroup Icterohemorrhagiae Malassezia restricta Moellerella wisconsensis Leptospira interrogans, serogroup Pomona Malassezia sympodialis Mogibacterium Leptospira interrogans, serogroup Pyrogenes Malbranchea Mogibacterium diversum Leptotrichia Malleomyces pseudomallei (OT) Mogibacterium neglectum Leptotrichia aerogenes Mannheimia Mogibacterium timidum Leptotrichia buccalis Mannheimia haemolytica Mogibacterium vescum Leptotrichia trevisanii Marburgvirus Mold Leuconostoc Massilia Molluscum contagiosum virus Leuconostoc amelibiosum Massilia timonae Monilia Leuconostoc citreum Mastadenovirus Monilia albicans Leuconostoc lactis Measles virus Monkeypox virus Leuconostoc mesenteroides Megamonas Monosporium apiospermum Leuconostoc pseudomesenteroides Megamonas hypermegale Morax‐Axenfeld bacillus Levinea amalonatica Megamonas hypermegas Moraxella Levinea malonitica Megasphaera Moraxella anatipestifer Listeria Megasphaera elsdenii Moraxella atlantae Listeria denitrificans Meningococcus Moraxella boevrei Listeria grayi Metarhizium Moraxella bovis Listeria innocua Metarhizium anisopliae Moraxella canis Listeria ivanovii Methicillin‐resistant Staphylococcus aureus Moraxella caprae Listeria monocytogenes Methylobacterium Moraxella catarrhalis Listeria seeligeri Methylobacterium mesophilicum Moraxella cuniculi Recognized Pathogens
Moraxella kingae Mycobacterium aquae Mycobacterium gadium Moraxella kingii Mycobacterium asiaticum Mycobacterium gastri Moraxella lacunata Mycobacterium aurum Mycobacterium genavense Moraxella lincolnii Mycobacterium austroafricanum Mycobacterium giae Moraxella liquefaciens Mycobacterium avium Mycobacterium gilvum Moraxella nonliquefaciens Mycobacterium avium complex Mycobacterium goodii Moraxella oblonga Mycobacterium balnei Mycobacterium gordonae Moraxella osloensis Mycobacterium boenickei Mycobacterium habana Moraxella ovis Mycobacterium bohemicum Mycobacterium haemophilum Moraxella phenylpyruvica Mycobacterium bolletii Mycobacterium hassiacum Moraxella polymorpha Mycobacterium bovis Mycobacterium heckeshornense Moraxella urethralis Mycobacterium branderi Mycobacterium heidelbergense Morbillivirus Mycobacterium brisbanense Mycobacterium hemophilum Morganella Mycobacterium brumae Mycobacterium hiberniae Morganella morganii Mycobacterium brunense Mycobacterium hodleri Morganella morganii sibonii Mycobacterium buruli Mycobacterium holsaticum Morganella morganii, biogroup 1 Mycobacterium canariasense Mycobacterium houstonense Mortierella Mycobacterium canariense Mycobacterium immunogenum Mortierella wolfii Mycobacterium canetti Mycobacterium interjectum Mucor Mycobacterium caprae Mycobacterium intermedium Mucor circinelloides Mycobacterium celatum Mycobacterium intracellulare Mucor hiemalis Mycobacterium chelonae Mycobacterium 'J' group Mucor janssenii Mycobacterium chelonae abscessus Mycobacterium johnei Mucor javanicus Mycobacterium chelonae chelonae Mycobacterium kansasii Mucor pusillus Mycobacterium chelonei Mycobacterium komossence Mucor racemosus Mycobacterium chesapeaki Mycobacterium komossense Mucor ramosissimus Mycobacterium chitae Mycobacterium kubicae Mucor rouxians Mycobacterium chlorophenolicus Mycobacterium lacticola multidrug resistant Achromobacter xylosoxidans Mycobacterium chubuense Mycobacterium lacus multidrug resistant Acinetobacter Mycobacterium confluentis Mycobacterium lentiflavum multidrug resistant Enterobacter asburiae Mycobacterium conspicuum Mycobacterium leprae multidrug resistant Klebsiella pneumoniae Mycobacterium cookii Mycobacterium littorale multidrug resistant Morganella morganii Mycobacterium cosmeticum Mycobacterium luciflavum multidrug resistant Pseudomonas aeruginosa Mycobacterium diernhoferi Mycobacterium madagascariense multiple drug‐resistant Enterobacter cloacae Mycobacterium doricum Mycobacterium mageritense multiple drug‐resistant Proteus mirabilis Mycobacterium duvalii Mycobacterium malmoense Mumps virus Mycobacterium elephantis Mycobacterium margeritense Mycete Mycobacterium fallax Mycobacterium marianum Mycobacterium Mycobacterium farcinogenes Mycobacterium marinum Mycobacterium abscessus Mycobacterium flavescens Mycobacterium massiliense Mycobacterium abscessus bolletii Mycobacterium fortuitum Mycobacterium microti Mycobacterium africanum Mycobacterium fortuitum complex Mycobacterium minetti Mycobacterium agri Mycobacterium fortuitum fortuitum Mycobacterium montefiorense Mycobacterium aichiense Mycobacterium fortuitum‐chelonae complex Mycobacterium moriokaense Mycobacterium alvei Mycobacterium frederiksbergense Mycobacterium mucogenicum Recognized Pathogens
Mycobacterium neoaurum Mycobacterium wolinskyi Neisseria macacae Mycobacterium neworleansense Mycobacterium xenopei Neisseria meningitidis Mycobacterium nonchromogenicum Mycobacterium xenopi Neisseria meningitidis serogroup A Mycobacterium novocastrense Mycobacterium, avium‐intracellulare group Neisseria meningitidis serogroup B Mycobacterium obuense Mycoplasma Neisseria meningitidis serogroup C Mycobacterium palustre Mycoplasma buccale Neisseria meningitidis serogroup W135 Mycobacterium paraffinicum Mycoplasma faucium Neisseria meningitidis serogroup Y Mycobacterium parafortuitum Mycoplasma fermentans Neisseria mucosa Mycobacterium parascrofulaceum Mycoplasma genitalium Neisseria ovis Mycobacterium paratuberculosis Mycoplasma hominis Neisseria parelongata Mycobacterium parmense Mycoplasma incognitus Neisseria pharyngis Mycobacterium peregrinum Mycoplasma laidlawii Neisseria polysaccharea Mycobacterium phlei Mycoplasma lipophilum Neisseria sicca Mycobacterium phocaicum Mycoplasma orale Neisseria subflava Mycobacterium pinnipedii Mycoplasma orale type 1 Neisseria weaveri Mycobacterium platypoecilus Mycoplasma orale type 2 Neorickettsia Mycobacterium porcinum Mycoplasma orale type 3 Neorickettsia sennetsu Mycobacterium psychrotolerans Mycoplasma penetrans Nesterenkonia Mycobacterium ranae Mycoplasma pirum Nesterenkonia halobia Mycobacterium rhodesiae Mycoplasma pneumoniae Nigrospora Mycobacterium scrofulaceum Mycoplasma primatum Nocardia Mycobacterium senegalense Mycoplasma salivarium Nocardia abscessus Mycobacterium septicum Mycoplasma spermatophilum Nocardia africana Mycobacterium sherrisii Mycoplasma, T strains Nocardia anaemiae Mycobacterium shimoidei Myroides Nocardia antarctica Mycobacterium shottsii Myroides odoratus Nocardia aobensis Mycobacterium simiae Myxovirus Nocardia araoensis Mycobacterium smegmatis Naegleria Nocardia arthritidis Mycobacterium sphagni Nannizzia Nocardia asiatica Mycobacterium szulgai Necator Nocardia asteroides Mycobacterium terrae Neisseria Nocardia asteroides complex Mycobacterium terrae complex Neisseria canis Nocardia beijingensis Mycobacterium thermoresistibile Neisseria catarrhalis Nocardia brasiliensis Mycobacterium tokaiense Neisseria cinerea Nocardia brevicatena Mycobacterium tokainse Neisseria cuniculi Nocardia carnea Mycobacterium triplex Neisseria dentiae Nocardia caviae Mycobacterium triviale Neisseria elongata Nocardia cyriacigeorgica Mycobacterium tuberculosis Neisseria elongata elongata Nocardia cyriacigeorgici Mycobacterium tuberculosis African variant Neisseria elongata glycolytica Nocardia dassonvillei Mycobacterium tuberculosis complex Neisseria elongata nitroreducens Nocardia elegans Mycobacterium tuberculosis group Neisseria flavescens Nocardia farcinica Mycobacterium tusciae Neisseria gonorrhoeae Nocardia higoensis Mycobacterium ulcerans Neisseria iguanae Nocardia inohanensis Mycobacterium vaccae Neisseria intracellularis Nocardia kruczakiae Mycobacterium vanbaalenii Neisseria lactamica Nocardia madurae Recognized Pathogens
Nocardia mexicana Orbivirus Pasteurella haemolytica Nocardia niigatensis Orf virus Pasteurella multocida Nocardia nova Orientia Pasteurella multocida biotype 6 Nocardia orientalis Orientia tsutsugamushi Pasteurella multocida gallicida Nocardia otitidiscaviarum Ornithosis virus Pasteurella multocida multocida Nocardia otitis caviarum Orthomyxovirus group Pasteurella multocida septica Nocardia paucivorans Paecilomyces Pasteurella pestis Nocardia pneumoniae Paecilomyces javanicus Pasteurella pneumotropica Nocardia pseudobrasiliensis Paecilomyces lilacinus Pasteurella pseudotuberculosis Nocardia sienata Paecilomyces marquandii Pasteurella stomatis Nocardia testacea Paecilomyces variotii Pasteurella tularensis Nocardia transvalensis Pandoraea Pasteurella ureae Nocardia veterana Pandoraea apista Pectobacterium Nocardia yamanashiensis Pandoraea norimbergensis Pediculus humanus Nocardiopsis Pandoraea pnomenusa Pediococcus Nocardiopsis dassonvillei Pandoraea pulmonicola Pediococcus acidilactici Nocardiopsos synnemataformans Pandoraea sputorum Pediococcus pentosaceus nonagglutinating Vibrio Pantoea Pedobacter Non‐hemolytic streptococcus Pantoea agglomerans Pedobacter heparinus Norovirus Pantoea ananas Pedobacter piscium Norwalk virus Pantoea ananatis Penicillium Nuttallia Pantoea dispersa Penicillium chrysogenum Obesumbacterium Papillomaviridae Penicillium citrinum Obesumbacterium proteus Parabacteroides Penicillium commune Ochrobactrum Parabacteroides distasonis Penicillium decumbens Ochrobactrum anthropi Parabacteroides merdae Penicillium expansum Ochrobactrum intermedium Paracoccus Penicillium griseofulvum Ochroconis Paracoccus yeei Penicillium lilacinum Ochroconis constricta Paramyxoviridae Penicillium marneffei Ochroconis gallopava Parascardovia Penicillium patulum Ochroconis gallopavum Parascardovia denticolens Penicillium puberulum Ochroconis humicola Parasite Penicillium purpurogenum Odoribacter Parvimonas Penicillium rubrum Odoribacter splanchnicus Parvimonas micra Penicillium spinulosum Ogataea Parvovirus Penicillium verruculosum Ogataea angusta Pasteurella Penicillium viridicatum Ogataea polymorpha Pasteurella aerogenes Peptococcus Oidiodendron Pasteurella anatipestifer Peptococcus asaccharolyticus Oidium albicans Pasteurella bettii Peptococcus glycinophilus Oligella Pasteurella bettyae Peptococcus indolicus Oligella urealytica Pasteurella caballi Peptococcus niger Oligella ureilytica Pasteurella canis Peptoniphilus Oligella ureolytica Pasteurella dagmatis Peptoniphilus asaccharolyticus Oligella urethralis Pasteurella enterocolitica Peptoniphilus harei Oospora lactis Pasteurella gallinarum Peptoniphilus ivorii Recognized Pathogens
Peptoniphilus lacrimalis Phoma Porphyromonas crevioricanis Peptostreptococcus Photobacterium Porphyromonas endodontalis Peptostreptococcus anaerobius Photobacterium damselae damselae Porphyromonas gingivalis Peptostreptococcus asaccharolyticus Photorhabdus Porphyromonas gingivicanis Peptostreptococcus elsdenii Photorhabdus asymbiotica Porphyromonas gulae Peptostreptococcus hydrogenalis Photorhabdus luminescens Porphyromonas levii Peptostreptococcus indolicus Photorhabdus temperata Porphyromonas macacae Peptostreptococcus lacrimalis Pichia Porphyromonas salivosa Peptostreptococcus lactolyticus Pichia angusta Porphyromonas somerae Peptostreptococcus magnus Pichia anomala Poxviridae Peptostreptococcus micros Pichia farinosa Pragia Peptostreptococcus octavius Pichia guilliermondii Pragia fontium Peptostreptococcus parvulus Pichia ohmeri Prevotella Peptostreptococcus prevotii Pichia polymorpha Prevotella bivia Peptostreptococcus productus Picornavirus Prevotella buccae Peptostreptococcus tetradius Piedraia Prevotella buccalis Peptostreptococcus vaginalis Piedraia hortae Prevotella corporis Petriellidium boydii Pithomyces Prevotella dentalis Petriellidum boydii Pityrosporum Prevotella denticola Pfeiffer's bacillus Pityrosporum canis Prevotella disiens Phaeoacremonium Pityrosporum furfur Prevotella enoeca Phaeoacremonium parasiticum Pityrosporum orbiculare Prevotella heparinolytica Phaeoannellomyces Pityrosporum ovale Prevotella intermedia Phaeoannellomyces werneckii Pityrosporum pachydermatis Prevotella loescheii Phaeoannelomyces werneckii Plasmodium Prevotella marshii Phaeococcomyces Plasmodium falciparum Prevotella melaninogenica Phaeococcomyces exophialae Plasmodium knowlesi Prevotella multiformis Phialemonium Plasmodium malariae Prevotella multisaccharivorax Phialemonium curvatum Plasmodium ovale Prevotella nigrescens Phialemonium dimorphosporum Plasmodium vivax Prevotella oralis Phialemonium obovatum Plesiomonas Prevotella oralis group Phialophera mutabilis Plesiomonas shigelloides Prevotella oris Phialophora Pleurostomophora Prevotella oulora Phialophora americana Pleurostomophora richardsiae Prevotella oulorum Phialophora compacta Pneumococcus Prevotella pallens Phialophora compactum Polyomaviridae Prevotella ruminicola Phialophora dermatitidis Polyomavirus Prevotella ruminicola ruminicola Phialophora europaea Porphyromonas Prevotella salivae Phialophora gougerotii Porphyromonas asaccharolyticus Prevotella shahii Phialophora hoffmannii Porphyromonas cangingivalis Prevotella tannerae Phialophora jeanselmei Porphyromonas canoris Prevotella veroralis Phialophora pedrosoi Porphyromonas cansulci Prevotella zoogleoformans Phialophora richardsiae Porphyromonas catoniae Propionimicrobium Phialophora spinifera Porphyromonas circumdentaria Propionimicrobium lymphophilum Phialophora verrucosa Porphyromonas circumentaria Proteus Recognized Pathogens
Proteus hauseri Pseudomonas delafieldii Pullularia pullulans Proteus inconstans, subgroup A Pseudomonas denitrificans Pustular dermatitis virus Proteus inconstans, subgroup B Pseudomonas diminuta Pyrenochaeta Proteus mirabilis Pseudomonas facilis Pyrenochaeta romeroi Proteus myxofaciens Pseudomonas fluorescens Rabies virus Proteus penneri Pseudomonas gladioli Radish bacillus Proteus rettgeri Pseudomonas hydrophila Rahnella Proteus vulgaris Pseudomonas luteola Rahnella aquatilis Proteus vulgaris biogroup 1 Pseudomonas mallei Rahnella genomospecies 1 Proteus vulgaris biogroup 3 Pseudomonas maltophilia Ralstonia Proteus vulgaris indole negative Pseudomonas marginalis Ralstonia gilardii Protomonas Pseudomonas mendocina Ralstonia insidiosa Prototheca Pseudomonas monteilii Ralstonia mannitolilytica Prototheca filamenta Pseudomonas mosselii Ralstonia paucula Prototheca wickerhamii Pseudomonas multivorans Ralstonia picketti Prototheca zopfii Pseudomonas odorans Ralstonia respiraculi Protozoan Pseudomonas oryzihabitans Ralstonia thomasii Providencia Pseudomonas paucimobilis Ramibacterium ramosum Providencia alcalifaciens Pseudomonas perfectomarina Ramichloridium cerophilum Providencia alcalifaciens biogroup 3 Pseudomonas perfectomarinus Raoultella Providencia friedericiana Pseudomonas pertucinogena Raoultella ornithinolytica Providencia haimbachae Pseudomonas pickettii Raoultella planticola Providencia heimbachae Pseudomonas pseudoalcaligenes Raoultella terrigena Providencia rettgeri Pseudomonas pseudomallei Rapid growing mycobacteria Providencia rustigianii Pseudomonas putida Reovirus group Providencia stuartii Pseudomonas putrefaciens Respiratory syncytial virus Pseudallescheria Pseudomonas pyocyaneus Respirovirus Pseudallescheria boydii Pseudomonas pyrrocinia Rhabdovirus Pseudoallescheria boydii Pseudomonas shigelloides Rhinocladiella Pseudoflavonifractor Pseudomonas stutzeri Rhinocladiella aquaspersa Pseudoflavonifractor capillosus Pseudomonas stutzeri‐like Rhinocladiella atrovirens Pseudomonas Pseudomonas testosteroni Rhinocladiella compacta Pseudomonas acidovorans Pseudomonas thomasii Rhinocladiella compactum Pseudomonas aeruginosa Pseudomonas veronii Rhinocladiella pedrosoi Pseudomonas alcaligenes Pseudomonas vesicularis Rhinocladiella spinifera Pseudomonas alcaligenes biotype B Pseudomonas, group IIK‐2 Rhinosporidium Pseudomonas alliicola Pseudomonas, group VA‐1 Rhizobium Pseudomonas antimicrobica Pseudoramibacter Rhizobium radiobacter Pseudomonas aureofaciens Pseudoramibacter alactolyticus Rhizobium rubi Pseudomonas beteli Pseudozyma Rhizobium vitis Pseudomonas betle Pseudozyma aphidids Rhizomucor Pseudomonas cepacia Psychrobacter Rhizomucor miehei Pseudomonas chloritidismutans Psychrobacter immobilis Rhizomucor pusillus Pseudomonas chlororaphis Psychrobacter phenylpyruvicus Rhizopus Pseudomonas cocovenenans Pullularia Rhizopus arrhizus Recognized Pathogens
Rhizopus microsporus Saccharopolyspora rectivirgula Sarcinomyces inkin Rhizopus nigricans Saksenaea Sarcinomyces werneckii Rhizopus oryzae Saksenaea vasiformis Sarcinosporon Rhizopus stolonifer Salivary gland virus Sarcinosporon inkin Rhodococcus chlorophenolicus Salmonella Sarcocystis Rhodotorula Salmonella Agona Sarcocystis hominis Rhodotorula glutinis Salmonella arizona Sarcocystis lindemanni Rhodotorula minuta Salmonella bongori Sarcocystis suihominis Rhodotorula mucilaginosa Salmonella Choleraesuis Scabies mite Rhodotorula pilimanae Salmonella diarizonae Scardovia Rhodotorula rubra Salmonella Dublin Scardovia inopinata Rickettsia Salmonella enterica Scedosporium Rickettsia akari Salmonella enterica arizonae Scedosporium apiospermum Rickettsia conorii Salmonella enterica diarizonae Scedosporium boydii Rickettsia mooseri Salmonella enterica enterica Scedosporium inflatum Rickettsia orientalis Salmonella enterica houtenae Scedosporium prolificans Rickettsia parkeri Salmonella enterica indica Schizophyllum Rickettsia prowazekii Salmonella enterica salamae Schizophyllum commune Rickettsia quintana Salmonella Enteritidis Scolecobasidium Rickettsia rickettsii Salmonella Gallinarum Scolecobasidium constrictum Rickettsia rickettsii, spotted fever group Salmonella group A Scolecobasidium humicola Rickettsia sibirica Salmonella group B Scopulariopsis Rickettsia tsutsugamushi Salmonella group C1 Scopulariopsis acremonium Rickettsia typhi Salmonella group C2 Scopulariopsis brevicaulis Riemerella Salmonella group F Scopulariopsis brumptii Riemerella anatipestifer Salmonella Heidelberg Scopulariopsis candida Rift Valley fever virus Salmonella houtenae Scrofula scotochromogen Rochalimaea Salmonella indica Scytalidium Rochalimaea elizabethae Salmonella Infantis Scytalidium dimidiatum Rochalimaea henselae Salmonella Montevideo Scytalidium hyalinum Rochalimaea quintana Salmonella Newport Scytalidium synanamorph of Hendersonula toruloidea Rochalimaea vinsonii Salmonella Oranienburg Scytalidium synanamorph of Nattrassia mangiferae Rochalimea Salmonella Paratyphi A Selenomonas Rotavirus Salmonella Paratyphi B Selenomonas artemidis Rubella virus Salmonella Paratyphi C Selenomonas dianae Rubeola virus Salmonella Saintpaul Selenomonas flueggei Rubivirus Salmonella salamae Selenomonas infelix Ruminococcus Salmonella Typhi Selenomonas noxia Ruminococcus hansenii Salmonella Typhimurium Selenomonas sputigena Ruminococcus productus Salmonella, serogroup D Sepedonium Saccharomonospora Salmonella, serogroup E Serpula jonesii Saccharomonospora viridis Sapromyces Serpulina Saccharomyces Sapromyces laidlawii Serpulina jonesii Saccharomyces cerevisiae Sarcina Serpulina pilosicoli Saccharopolyspora Sarcina ventriculi Serratia Recognized Pathogens
Serratia entomophila Sphingobacterium Staphylococcus lutrae Serratia ficaria Sphingobacterium antarcticum Staphylococcus parvulus Serratia fonticola Sphingobacterium antarcticus Staphylococcus pseudintermedius Serratia grimesii Sphingobacterium faecium Staphylococcus pyogenes aureus Serratia liquefaciens Sphingobacterium heparinum Staphylococcus pyogenes citreus Serratia marcescens Sphingobacterium mizutae Staphylococcus schleiferi Serratia marcescens, Biogroup I Sphingobacterium multivorum Staphylococcus schleiferi coagulans Serratia marinorubra Sphingobacterium piscium Staphylococcus, coagulase positive Serratia odorifera Sphingobacterium spiritivorum Stemphylium Serratia odorifera biogroup 1 Sphingobacterium thalpophilum Stenotrophomonas Serratia odorifera biogroup 2 Sphingobacterium versatilis Stenotrophomonas maltophilia Serratia plymuthica Sphingobacterium yabuuchiae Stephanoascus Serratia proteamaculans Sphingomonas Stephanoascus ciferrii Serratia proteamaculans proteamaculans Sphingomonas parapaucimobilis Streptobacillus Serratia proteamaculans quinovora Sphingomonas paucimobilis Streptobacillus moniliformis Serratia quinivorans Spirilla morsus minus Streptococcus Serratia rubidaea Spirillum Streptococcus acidominimus Serratia ureilytica Spirillum minor Streptococcus adjacens Shewanella Spirillum minus Streptococcus agalactiae Shewanella algae Spirochaeta morsus minus Streptococcus alactolyticus Shewanella putrefaciens Spirochaeta muris Streptococcus anaerobius micros Shiga's bacillus Spirochaeta pallida Streptococcus avium Shigella Sporobolomyces Streptococcus canis Shigella biogroup A Sporobolomyces roseus Streptococcus casseliflavus Shigella biogroup B Sporobolomyces salmonicolor Streptococcus cecorum Shigella biogroup C Sporothrix Streptococcus defectivus Shigella biogroup D Sporothrix cyanescens Streptococcus difficilis Shigella boydii Sporothrix schenckii Streptococcus durans Shigella dysenteriae Sporothrix schenkii Streptococcus dysgalactiae Shigella flexneri Sporotrichum Streptococcus dysgalactiae dysgalactiae Shigella sonnei Sporotrichum beurmannii Streptococcus dysgalactiae equisimilis Simian Virus 40 Sporotrichum pruinosum Streptococcus elegans Simonsiella Sporotrichum schenckii Streptococcus equi Simonsiella crassa Sporotrichum schenkii Streptococcus equi equi Simonsiella muelleri St Louis encephalitis virus Streptococcus equi zooepidemicus Slackia Stachybotrys Streptococcus faecalis Slackia exigua Stachybotrys chartarum Streptococcus faecium Slackia heliotrinireducens Staphylococcus Streptococcus fecalis malodoratus Smallpox virus Staphylococcus asaccharolyticus Streptococcus gallinarum Smegma bacillus Staphylococcus aureus Streptococcus garviae Smooth colony variant of Mycobacterium tuberculosis Staphylococcus caseolyticus Streptococcus group D, Enterococcus Sneathia Staphylococcus delphini Streptococcus hansenii Sneathia sanguinegens Staphylococcus hyicus Streptococcus hyovaginalis Sphaerophorus fusiformis Staphylococcus hyicus hyicus Streptococcus iniae Sphaerophorus necrophorus Staphylococcus intermedius Streptococcus intestinalis Recognized Pathogens
Streptococcus lactis Sutterella Treponema pallidum pallidum Streptococcus macacae Sutterella wadsworthensis Treponema pallidum pertenue Streptococcus micros Suttonella Treponema pertenue Streptococcus morbillorum Suttonella indologenes TRIC agent Streptococcus oligofermentans Syncephalastrum Trichinella Streptococcus parvulus Syncephalastrum racemosum Trichoderma Streptococcus pleomorphus Taenia Trichoderma viride Streptococcus pneumoniae Tanapox virus Trichomonas Streptococcus porcinus Tannerella Trichophyton Streptococcus productus Tannerella forsythensis Trichosporon Streptococcus pseudopneumoniae Tannerella forsythia Trichosporon asahii Streptococcus pyogenes Tatlockia Trichosporon beigelii Streptococcus pyogenes animalis Tatlockia macaechernii Trichosporon capitatum Streptococcus saccharolyticus Tatlockia micdadei Trichosporon capitum Streptococcus shiloi Tatumella Trichosporon cutaneum Streptococcus sinensis Tatumella ptyseos Trichosporon giganteum Streptococcus suis Tetragenococcus Trichosporon inkin Streptococcus uberis Tetragenococcus halophilus Trichosporon loubieri Streptococcus zooepidemicus Tetragenococcus solitarius Trichosporon mucoides Streptococcus, group A Theileria tsutsugamushi Trichosporon mycotoxinivorans Streptococcus, group C Thermoactinomyces Trichosporon ovoides Streptococcus, group D Tick‐borne encephalitis virus Trichosporon pullulans Streptococcus, group E Timothy grass bacillus Trichostrongylus Streptococcus, group G Tissierella Trichothecium Streptococcus, group L Tissierella praeacuta Trichuris Streptomyces T‐mycoplasma Tropheryma Streptomyces albus Togavirus Tropheryma whipplei Streptomyces bikiniensis Torulopsis Trypanosoma Streptomyces candidus Torulopsis aggregata Trypanosoma brucei Streptomyces caviscabies Torulopsis candida Trypanosoma brucei rhodesiense Streptomyces clavuligerus Torulopsis famata Trypanosoma cruzi Streptomyces erumpens Torulopsis glabrata Trypanosoma escomelis Streptomyces filamentosus Torulopsis haemulonii Trypanosoma rangeli Streptomyces griseus Torulopsis inconspicua Trypanosoma triatomae Streptomyces lincolnensis Torulopsis pintolopesii Turicibacter Streptomyces roseosporus Toxocara Turicibacter sanguinis Streptomyces setonii Toxoplasma Typhoid bacillus Streptomyces somaliensis Toxoplasma gondii Ulocladium Streptomyces spectabilis Trabulsiella Ureaplasma Streptomyces thermovulgaris Trabulsiella guamensis Ureaplasma parvum Streptomyces venezuelae Treponema Ureaplasma urealyticum Streptothrix dassonvillei Treponema carateum Ustilago Strongyloides Treponema jonesii Vaccinia virus Succinivibrio Treponema pallidum Vagococcus Succinivibrio dextrinosolvens Treponema pallidum endemicum Vagococcus fluvialis Recognized Pathogens
Vancomycin resistant Enterococcus Virus Yersinia pseudotuberculosis pseudotuberculosis Vancomycin resistant Enterococcus faecalis Vole bacillus Yersinia rohdei Vancomycin resistant Enterococcus faecium Wangiella Yersinia ruckeri Varicellavirus Wangiella dermatitidis Yokenella Varicella‐zoster virus Wart virus Yokenella regensburgei Varicellovirus Wautersia Zika virus Variola virus Wautersia gilardii Zymobacterium oroticum Veillonella Wautersia respiaculi Mycobacterium murale Veillonella alcalescens Weeksella Veillonella alcalescens criceti Weeksella virosa Veillonella alcalescens ratii Weeksella zoohelcum Veillonella atypica Weissella Veillonella caviae Weissella confusa Veillonella criceti Welchia perfringens Veillonella dispar West Nile virus Veillonella montpellierensis Western equine encephalitis virus Veillonella parvula Western equine encephalomyelitis virus Veillonella ratti Whitmore's bacillus Veillonella rodentium Wolinella Venezuelan equine encephalitis virus Wolinella curva Venezuelan equine encephalomyelitis virus Wolinella recta Verticillium Wolinella succinogenes Vibrio Xanthomonas Vibrio albensis Xanthomonas maltophilia Vibrio alginolyticus Xenorhabdus Vibrio carchariae Xenorhabdus luminescens Vibrio cholerae Xenorhabdus nematophila Vibrio cholerae biovar proteus Xenotropic murine leukemia virus‐related virus Vibrio cholerae serogroup O1 Yeast Vibrio cholerae, non‐O1 Yellow fever virus Vibrio cholerae, O1 Yersinia Vibrio cincinnatiensis Yersinia aldovae Vibrio comma Yersinia aleksiciae Vibrio damsela Yersinia bercovieri Vibrio fetus Yersinia enterocolitica Vibrio fluvialis Yersinia enterocolitica biogroup 3a Vibrio furnissii Yersinia enterocolitica biogroup 3b Vibrio harveyi Yersinia frederiksenii Vibrio metschnikovii Yersinia intermedia Vibrio mimicus Yersinia kristensenii Vibrio parahaemolyticus Yersinia mollareti Vibrio sputorum Yersinia mollaretii Vibrio succinogenes Yersinia pestis Vibrio trachuri Yersinia pseudotuberculosis Vibrio vulnificus Yersinia pseudotuberculosis pestis