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Table S2. Differential Expression in Gill Tissue from Arctic Charr (Salvelinus Alpinus) Family 10 After Transfer from Freshwater to Seawater

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Table S2. Differential Expression in Gill Tissue from Arctic Charr (Salvelinus Alpinus) Family 10 After Transfer from Freshwater to Seawater Table S2. Differential expression in gill tissue from Arctic charr (Salvelinus alpinus) family 10 after transfer from freshwater to seawater. AC gill Expression BLASTX alignment Count contig ID P Log2(ER) Sequence description % ID E-Value Score 1 325062 2.5E-06 8.05 gi_301607131, XP_002933173.1, PREDICTED: hypothetical protein LOC100488659 [Xenopus (Silurana) 73 1.1E-10 69 tropicalis] 2 192325 1.5E-05 7.98 gi_410896384, XP_003961679.1, PREDICTED: splicing factor 3B subunit 1-like [Takifugu rubripes] 96 < 1.0E-180 2183 3 258728 2.0E-04 7.52 gi_29841473, AAP06505.1, hypothetical protein [Schistosoma japonicum] 78 2.2E-09 63 4 84094 9.5E-06 7.18 gi_307147580, ADN37680.1, hyopthetical protein [Oncorhynchus mykiss] 71 3.6E-48 179 5 394200 3.7E-04 7.15 gi_198285501, ACH85289.1, hypothetical protein [Salmo salar] 74 2.1E-06 55 6 500590 < 1.0E-10 6.8 gi_76153153, AAX24812.2, SJCHGC04011 protein [Schistosoma japonicum] 83 5.6E-16 87 7 697485 < 1.0E-10 6.72 gi_348542840, XP_003458892.1, PREDICTED: tensin-1-like [Oreochromis niloticus] 72 < 1.0E-180 986 8 277901 < 1.0E-10 6.64 gi_348544791, XP_003459864.1, PREDICTED: CD209 antigen-like [Oreochromis niloticus] 68 1.0E-50 186 9 573774 < 1.0E-10 6.59 gi_348541695, XP_003458322.1, PREDICTED: protein furry homolog [Oreochromis niloticus] 94 < 1.0E-180 4163 10 600452 1.5E-04 6.33 gi_213512967, NP_001133246.1, Epidermis-type lipoxygenase 3 [Salmo salar] >gi_209147549, 67 2.7E-47 172 ACI32895.1, Epidermis-type lipoxygenase 3 [Salmo salar] 11 196145 1.2E-10 6.14 gi_395544590, XP_003774191.1, PREDICTED: liprin-alpha-1 isoform 1 [Sarcophilus harrisii] 84 < 1.0E-180 1527 12 122834 < 1.0E-10 6.09 gi_348538967, XP_003456961.1, PREDICTED: dnaJ homolog subfamily A member 3, mitochondrial-like 86 9.9E-139 431 [Oreochromis niloticus] 13 411052 < 1.0E-10 6.02 gi_225705852, ACO08772.1, GTPase, IMAP family member 7 [Oncorhynchus mykiss] 80 2.9E-43 164 14 278939 1.8E-03 5.98 gi_213515472, NP_001134309.1, Natterin-like protein [Salmo salar] >gi_209153466, ACI33163.1, 95 2.6E-174 497 Natterin-like protein [Salmo salar] >gi_209732252, ACI66995.1, Natterin-like protein [Salmo salar] >gi_209738620, ACI70179.1, Natterin-like protein [Salmo salar] >gi_223647200, ACN10358.1, Natterin- like protein [Salmo salar] >gi_223649054, ACN11285.1, Natterin-like protein [Salmo salar] >gi_223673073, ACN12718.1, Natterin-like protein [Salmo salar] >gi_303667191, ADM16257.1, Natterin-like protein [Salmo salar] 15 97243 < 1.0E-10 5.95 gi_194018427, NP_001123464.1, otolith matrix macromolecule-64 precursor [Oncorhynchus mykiss] 85 9.1E-113 371 >gi_171363649, BAG14384.1, otolith matrix macromolecule-64 [Oncorhynchus mykiss] 16 738412 3.8E-10 5.92 gi_348545386, XP_003460161.1, PREDICTED: hypothetical protein LOC100702240 [Oreochromis 63 1.8E-63 163 niloticus] 17 325057 4.6E-03 5.87 gi_301607131, XP_002933173.1, PREDICTED: hypothetical protein LOC100488659 [Xenopus (Silurana) 73 2.3E-09 69 tropicalis] 18 600471 3.6E-03 5.83 gi_213512967, NP_001133246.1, Epidermis-type lipoxygenase 3 [Salmo salar] >gi_209147549, 74 < 1.0E-180 576 ACI32895.1, Epidermis-type lipoxygenase 3 [Salmo salar] 19 211112 2.3E-05 5.81 gi_363744067, XP_001233210.2, PREDICTED: avidin-related protein 4/5-like [Gallus gallus] 53 4.1E-17 85 20 128003 < 1.0E-10 5.77 gi_291390651, XP_002711849.1, PREDICTED: uromodulin-like [Oryctolagus cuniculus] 55 4.9E-68 153 21 42944 8.0E-03 5.69 gi_348538036, XP_003456498.1, PREDICTED: endonuclease domain-containing 1 protein-like 63 1.1E-44 166 [Oreochromis niloticus] AC gill Expression BLASTX alignment Count contig ID P Log2(ER) Sequence description % ID E-Value Score 22 563916 1.4E-04 5.66 gi_348539876, XP_003457415.1, PREDICTED: heat shock 70 kDa protein 12A-like [Oreochromis 73 2.9E-123 404 niloticus] 23 413191 1.1E-06 5.61 gi_156355451, XP_001623681.1, predicted protein [Nematostella vectensis] >gi_156210403, 46 7.7E-07 55 EDO31581.1, predicted protein [Nematostella vectensis] 24 480420 4.8E-05 5.59 gi_390362987, XP_788663.3, PREDICTED: histamine H3 receptor-like [Strongylocentrotus purpuratus] 65 4.3E-06 54 25 38120 3.3E-02 5.57 gi_348512973, XP_003444017.1, PREDICTED: N-acetyltransferase 10 [Oreochromis niloticus] 91 < 1.0E-180 617 26 60409 1.7E-04 5.43 gi_16549028, CAC82808.1, inducible nitric oxide synthase [Oncorhynchus mykiss] 98 < 1.0E-180 1453 27 153447 3.8E-03 5.4 gi_167963456, NP_001108173.1, uncharacterized protein LOC100137104 [Danio rerio] >gi_194332601, 68 6.5E-152 320 NP_001123789.1, tripartite motif containing 39 [Xenopus (Silurana) tropicalis] >gi_158254035, AAI54145.1, Zgc:173581 protein [Danio rerio] >gi_189441755, AAI67553.1, LOC100170539 protein [Xenopus (Silurana) tropicalis] 28 563824 1.6E-04 5.32 gi_348539878, XP_003457416.1, PREDICTED: heat shock 70 kDa protein 12A-like [Oreochromis 72 2.0E-29 123 niloticus] 29 378629 1.0E-04 5.19 gi_130505373, NP_001076412.1, uncharacterized protein LOC100001227 [Danio rerio] >gi_94732985, 53 1.4E-15 84 CAK04768.1, novel protein [Danio rerio] 30 508214 1.4E-03 5.13 gi_327278390, XP_003223945.1, PREDICTED: interferon-induced very large GTPase 1-like [Anolis 69 1.7E-44 176 carolinensis] 31 669633 3.1E-02 5.13 gi_213514702, NP_001134561.1, Angiogenin-1 precursor [Salmo salar] >gi_209734282, ACI68010.1, 78 5.9E-62 203 Angiogenin-1 precursor [Salmo salar] 32 45834 7.1E-04 5.11 gi_348524546, XP_003449784.1, PREDICTED: protein FAM193A-like [Oreochromis niloticus] 67 3.2E-50 199 33 661818 1.4E-02 5.11 gi_348516981, XP_003446015.1, PREDICTED: hypothetical protein LOC100697337 [Oreochromis 55 1.3E-23 103 niloticus] 34 496824 5.6E-04 5.07 gi_85679686, ABC72122.1, myeloperoxidase [Siniperca chuatsi] 84 < 1.0E-180 1111 35 542772 1.2E-03 5.07 gi_326664433, XP_003197815.1, PREDICTED: GTPase IMAP family member 2-like [Danio rerio] 73 7.5E-62 210 36 570584 1.9E-04 5.05 gi_225869567, YP_002745514.1, collagen-like surface-anchored protein SclG [Streptococcus equi subsp. 43 2.4E-05 55 equi 4047] >gi_37498977, AAQ91579.1, collagen-like protein 3 [Streptococcus equi] >gi_76262845, ABA41497.1, collagen-like protein G [Streptococcus equi subsp. equi] >gi_225698971, CAW92025.1, putative collagen-like surface-anchored protein SclG [Streptococcus equi subsp. equi 4047] 37 401592 2.4E-03 5.03 gi_326665132, XP_003197975.1, PREDICTED: apoptosis-associated speck-like protein containing a 56 3.2E-04 48 CARD-like isoform 1 [Danio rerio] >gi_326665134, XP_003197976.1, PREDICTED: apoptosis-associated speck-like protein containing a CARD-like isoform 2 [Danio rerio] >gi_326665136, XP_003197977.1, PREDICTED: apoptosis-associated speck-like protein containing a CARD-like isoform 3 [Danio rerio] >gi_326665138, XP_003197978.1, PREDICTED: apoptosis-associated speck-like protein containing a CARD-like isoform 4 [Danio rerio] 38 336700 1.9E-03 4.96 gi_223647836, ACN10676.1, Butyrophilin subfamily 1 member A1 precursor [Salmo salar] 89 5.9E-116 346 39 480417 7.7E-04 4.77 gi_357483895, XP_003612234.1, ATP synthase subunit a chloroplastic [Medicago truncatula] 78 5.5E-07 56 >gi_355513569, AES95192.1, ATP synthase subunit a chloroplastic [Medicago truncatula] AC gill Expression BLASTX alignment Count contig ID P Log2(ER) Sequence description % ID E-Value Score 40 708981 1.5E-02 4.75 gi_348506676, XP_003440884.1, PREDICTED: interleukin-17F-like [Oreochromis niloticus] 58 1.9E-22 102 41 413205 6.5E-03 4.7 gi_213514862, NP_001133599.1, Zinc finger protein Gfi-1b [Salmo salar] >gi_209154630, ACI33547.1, 77 9.7E-04 49 Zinc finger protein Gfi-1b [Salmo salar] 42 128002 6.9E-03 4.62 gi_291390651, XP_002711849.1, PREDICTED: uromodulin-like [Oryctolagus cuniculus] 51 4.0E-80 280 43 346911 4.6E-03 4.55 gi_326669328, XP_684086.4, PREDICTED: interferon-induced very large GTPase 1-like [Danio rerio] 66 6.9E-111 377 44 745502 2.5E-02 4.53 gi_325652196, NP_001191714.1, interleukin-17A/F-1 [Oryzias latipes] >gi_313849038, BAJ41371.1, 73 4.4E-37 139 interleukin-17A/F-1 [Oryzias latipes] 45 81546 1.6E-02 4.49 gi_326670011, XP_001338721.3, PREDICTED: tumor necrosis factor receptor superfamily member 5 59 5.4E-13 75 [Danio rerio] 46 498314 3.0E-03 4.4 gi_225716670, ACO14181.1, 3-oxoacyl-acyl-carrier-protein reductase [Esox lucius] 97 5.8E-149 469 47 136874 4.7E-02 4.38 gi_348534761, XP_003454870.1, PREDICTED: P2Y purinoceptor 13-like [Oreochromis niloticus] 71 4.0E-85 272 48 534891 3.5E-02 4.37 gi_76153153, AAX24812.2, SJCHGC04011 protein [Schistosoma japonicum] 65 6.2E-20 93 49 654418 3.5E-02 4.2 gi_219916835, CAQ60110.1, cathelicidin 1 [Salvelinus fontinalis] 97 3.0E-89 276 50 563881 1.9E-02 4.18 gi_348544651, XP_003459794.1, PREDICTED: heat shock 70 kDa protein 12A-like [Oreochromis 74 9.2E-42 153 niloticus] 51 716958 2.0E-02 4.16 gi_348525699, XP_003450359.1, PREDICTED: ELL-associated factor 1-like [Oreochromis niloticus] 90 6.3E-119 374 52 343460 5.1E-02 4.08 gi_156408850, XP_001642069.1, predicted protein [Nematostella vectensis] >gi_156229210, 41 1.7E-17 91 EDO50006.1, predicted protein [Nematostella vectensis] 53 162163 4.2E-02 4 gi_348535132, XP_003455055.1, PREDICTED: hypothetical protein LOC100705794 [Oreochromis 65 8.8E-43 171 niloticus] 54 738388 3.8E-02 3.99 gi_348517678, XP_003446360.1, PREDICTED: interferon-induced very large GTPase 1-like 70 1.4E-56 211 [Oreochromis niloticus] 55 410960 2.8E-05 3.85 gi_156387632, XP_001634307.1, predicted protein [Nematostella vectensis] >gi_156221388, 58 3.1E-11 67 EDO42244.1, predicted protein [Nematostella vectensis] 56 211114 1.3E-02 3.83 gi_93279520, pdb, 2FHL, AChain A, Avidin Related Protein (Avr4)-Bna Complex >gi_93279521, pdb, 57 1.8E-08 59 2FHL, B Chain B, Avidin Related
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