Unusual Chromosome Heteromorphism in the Tsinling Tree Frog, Hyla Tsinlingensis
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New Insight Into the Phylogeographic Pattern Of
New insight into the phylogeographic pattern of Liriodendron chinense (Magnoliaceae) revealed by chloroplast DNA: east–west lineage split and genetic mixture within western subtropical China Aihong Yang, Yongda Zhong, Shujuan Liu, Lipan Liu, Tengyun Liu, Yanqiang Li and Faxin Yu The Key Laboratory of Horticultural Plant Genetic and Improvement of Jiangxi, Institute of Biological Resources, Jiangxi Academy of Sciences, Nanchang, Jiangxi, China ABSTRACT Background: Subtropical China is a global center of biodiversity and one of the most important refugia worldwide. Mountains play an important role in conserving the genetic resources of species. Liriodendron chinense is a Tertiary relict tree largely endemic to subtropical China. In this study, we aimed to achieve a better understanding of the phylogeographical pattern of L. chinense andtoexploretheroleofmountainsintheconservationofL. chinense genetic resources. Methods: Three chloroplast regions (psbJ-petA, rpl32-ndhF, and trnK5’-matK) were sequenced in 40 populations of L. chinense for phylogeographical analyses. Relationships among chloroplast DNA (cpDNA) haplotypes were determined using median-joining networks, and genetic structure was examined by spatial analysis of molecular variance (SAMOVA). The ancestral area of the species was reconstructed using the Bayesian binary Markov Chain Monte Carlo (BBM) method according to its geographic distribution and a maximum parsimony (MP) tree based on Bayesian methods. Results: Obvious phylogeographic structure was found in L. chinense. SAMOVA Submitted 13 September 2018 revealed seven groups matching the major landscape features of the L. chinense Accepted 26 December 2018 Published 1 February 2019 distribution area. The haplotype network showed three clades distributed in the eastern, southwestern, and northwestern regions. Separate northern and southern Corresponding author Faxin Yu, [email protected] refugia were found in the Wu Mountains and Yungui Plateau, with genetic admixture in the Dalou Mountains and Wuling Mountains. -
China's Special Poor Areas and Their Geographical Conditions
sustainability Article China’s Special Poor Areas and Their Geographical Conditions Xin Xu 1,2, Chengjin Wang 1,2,*, Shiping Ma 1,2 and Wenzhong Zhang 1,2 1 Institute of Geographic Sciences and Natural Resources Research, Chinese Academy of Sciences, Beijing 100101, China; [email protected] (X.X.); [email protected] (S.M.); [email protected] (W.Z.) 2 College of Resources and Environment, University of Chinese Academy of Sciences, Beijing 100049, China * Correspondence: [email protected] Abstract: Special functional areas and poor areas tend to spatially overlap, and poverty is a common feature of both. Special poor areas, taken as a kind of “policy space,” have attracted the interest of researchers and policymakers around the world. This study proposes a basic concept of special poor areas and uses this concept to develop a method to identify them. Poor counties in China are taken as the basic research unit and overlaps in spatial attributes including old revolutionary bases, borders, ecological degradation, and ethnic minorities, are used to identify special poor areas. The authors then analyze their basic quantitative structure and pattern of distribution to determine the geographical bases’ formation and development. The results show that 304 counties in China, covering a vast territory of 12 contiguous areas that contain a small population, are lagging behind the rest of the country. These areas are characterized by rich energy and resource endowments, important ecological functions, special historical status, and concentrated poverty. They are considered “special poor” for geographical reasons such as a relatively harsh natural geographical environment, remote location, deteriorating ecological environment, and an inadequate infrastructure network and public service system. -
For Review Only
Page 63 of 123 Evolution Moen et al. 1 1 2 3 4 5 Appendix S1: Supplementary data 6 7 Table S1 . Estimates of local species composition at 39 sites in Middle America based on data summarized by Duellman 8 9 10 (2001). Locality numbers correspond to Table 2. References for body size and larval habitat data are found in Table S2. 11 12 Locality and elevation Body Larval Subclade within Middle Species present Hylid clade 13 (country, state, specific location)For Reviewsize Only habitat American clade 14 15 16 1) Mexico, Sonora, Alamos; 597 m Pachymedusa dacnicolor 82.6 pond Phyllomedusinae 17 Smilisca baudinii 76.0 pond Middle American Smilisca clade 18 Smilisca fodiens 62.6 pond Middle American Smilisca clade 19 20 21 2) Mexico, Sinaloa, Mazatlan; 9 m Pachymedusa dacnicolor 82.6 pond Phyllomedusinae 22 Smilisca baudinii 76.0 pond Middle American Smilisca clade 23 Smilisca fodiens 62.6 pond Middle American Smilisca clade 24 Tlalocohyla smithii 26.0 pond Middle American Tlalocohyla 25 Diaglena spatulata 85.9 pond Middle American Smilisca clade 26 27 28 3) Mexico, Durango, El Salto; 2603 Hyla eximia 35.0 pond Middle American Hyla 29 m 30 31 32 4) Mexico, Jalisco, Chamela; 11 m Dendropsophus sartori 26.0 pond Dendropsophus 33 Exerodonta smaragdina 26.0 stream Middle American Plectrohyla clade 34 Pachymedusa dacnicolor 82.6 pond Phyllomedusinae 35 Smilisca baudinii 76.0 pond Middle American Smilisca clade 36 Smilisca fodiens 62.6 pond Middle American Smilisca clade 37 38 Tlalocohyla smithii 26.0 pond Middle American Tlalocohyla 39 Diaglena spatulata 85.9 pond Middle American Smilisca clade 40 Trachycephalus venulosus 101.0 pond Lophiohylini 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 Evolution Page 64 of 123 Moen et al. -
(Leech, 1890) (Lepidoptera: Hesperiidae) with Description of Female Genitalia and Taxonomic Notes
© Entomologica Fennica. 31 August 2016 Distribution of Onryza maga (Leech, 1890) (Lepidoptera: Hesperiidae) with description of female genitalia and taxonomic notes Guoxi Xue, Yufei Li, Zihao Liu, Meng Li & Yingdang Ren Xue, G. X., Li, Y.F., Liu, Z. H., Li, M. & Ren, Y.D. 2016: Distribution of Onryza maga (Leech, 1890) (Lepidoptera: Hesperiidae) with description of female geni- talia and taxonomic notes. — Entomol. Fennica 27: 70–76. For more than twenty years, Hainan, Vietnam, Myanmar, Thailand, Malaysia, Singapore and Indonesia have been erroneously reported in Chinese literature as belonging to the distribution range of Onryza maga (Leech 1890). Based upon a careful survey of specimens and relevant literature, these regions are omitted from the known range of this species. Onryza maga maga is found from northeast Guizhou, south Henan and Qinling-Daba Mountains in Shaanxi of China, its oc- currence in Hunan is confirmed. The adults are redescribed and the variability of wing patterns is discussed. Female genitalia are illustrated and described for the first time. Some biological information and an updated distribution map of the species are provided. G. X. Xue & M. Li, School of Food and Bioengineering, Zhengzhou University of Light Industry, No. 5 Dongfeng Road, Zhengzhou, Henan, 450002, P. R. China; Corresponding author’s e-mail: [email protected] Y. F. Li, School of Medicine, Xi’an Jiaotong University, No. 76 Yanta West Road, Xi’an, Shaanxi, 710061, P. R. China Z. H. Liu, School of Physics, University of Science and Technology of China, No. 96 Jinzhai Road, Hefei, Anhui, 230026, P. R. China Y. D. -
Study on the Coniferous Characters of Pinus Yunnanensis and Its Clustering Analysis
Journal of Polymer Science and Engineering (2017) Original Research Article Study on the Coniferous Characters of Pinus yunnanensis and Its Clustering Analysis Zongwei Zhou,Mingyu Wang,Haikun Zhao Huangshan Institute of Botany, Anhui Province, China ABSTRACT Pine is a relatively easy genus for intermediate hybridization. It has been widely believed that there should be a natural hybrid population in the distribution of Pinus massoniona Lamb. and Pinus hangshuanensis Hsia, that is, the excessive type of external form between Pinus massoniana and Pinus taiwanensis exist. This paper mainly discusses the traits and clustering analysis of coniferous lozeng in Huangshan scenic area. This study will provide a theoretical basis for the classification of long and outstanding Huangshan Song and so on. At the same time, it will provide reference for the phenomenon of gene seepage between the two species. KEYWORDS: Pinus taiwanensis Pinus massoniana coniferous seepage clustering Citation: Zhou ZW, Wang MY, ZhaoHK, et al. Study on the Coniferous Characters of Pinus yunnanensis and Its Clustering Analysis, Gene Science and Engineering (2017); 1(1): 19–27. *Correspondence to: Haikun Zhao, Huangshan Institute of Botany, Anhui Province, China, [email protected]. 1. Introduction 1.1. Research background Huangshan Song distribution in eastern China’s subtropical high mountains, more than 700m above sea level. Masson pine is widely distributed in the subtropical regions of China, at the lower reaches of the Yangtze River, vertically distributed below 700m above sea level, the upper reaches of the Yangtze River area, the vertical height of up to 1200 - 1500m or so. In the area of Huangshan Song and Pinus massoniana, an overlapping area of Huangshan Song and Pinus massoniana was formed between 700 - 1000m above sea level. -
Morphological Alterations in the External Gills of Some Tadpoles in Response to Ph
THIEME 142 Original Article Morphological Alterations in the External Gills of Some Tadpoles in Response to pH CaressaMaebhaThabah1 Longjam Merinda Devi1 Rupa Nylla Kynta Hooroo1 Sudip Dey2 1 Developmental Biology Laboratory, Department of Zoology, North- Address for correspondence Caressa Maebha Thabah, PhD in Eastern Hill University, Shillong, Meghalaya, India Zoology, Developmental Biology Laboratory, Department of Zoology, 2 Electron Microscope Laboratory, Sophisticated Analytical Instrument North-Eastern Hill University, Shillong 793022, Meghalaya, India Facility, North-Eastern Hill University, Shillong, Meghalaya, India (e-mail: [email protected]). J Morphol Sci 2018;35:142–152. Abstract Introduction Water pH affects the breeding, hatching, development, locomotion, mortality and habitat distributions of species in nature. The external gills of anuran tadpoles were studied by several authors in relation to abiotic factors. Exposure to low and high pH has been found to adversely affect the different tissues of various organisms. On that consideration, the present investigation was performed with tadpoles of the species Hyla annectans and Euphlyctis cyanophlyctis. Material and Methods The maximum and the minimum pH thresholds were determined prior to the detailed experiments on the effects of pH. The pH that demonstrated 50% mortality was taken as the minimum and maximum pH thresholds. The hatchlings of both the species were then subjected to different pH (based on the minimum and maximum pH thresholds). After 48 hours of exposure, the external gills of the hatchlings were anesthetized and observed under a scanning electron microscope. Keywords Results After 48 hours, clumping, overlapping and curling of the secondary filaments ► Hyla annectans of the external gills and epithelial lesions in response to both acidic and alkaline pH ► Euphlyctis were observed. -
Short Toxin-Like Proteins Abound in Cnidaria Genomes
Toxins 2012, 4, 1367-1384; doi:10.3390/toxins4111367 OPEN ACCESS toxins ISSN 2072-6651 www.mdpi.com/journal/toxins Article Short Toxin-like Proteins Abound in Cnidaria Genomes Yitshak Tirosh 1, Itai Linial 2, Manor Askenazi 1 and Michal Linial 1,* 1 Department of Biological Chemistry, Silberman Institute of Life Sciences, The Hebrew University of Jerusalem, Jerusalem 91904, Israel; E-Mails: [email protected] (Y.T.); [email protected] (M.A.) 2 The Racah Institute of Physics, The Hebrew University of Jerusalem, Jerusalem 91904, Israel; E-Mail: [email protected] * Author to whom correspondence should be addressed; E-Mail: [email protected]; Tel.: +972-2-658-5425; Fax: +972-2-658-6448. Received: 24 September 2012; in revised form: 8 November 2012 / Accepted: 9 November 2012 / Published: 16 November 2012 Abstract: Cnidaria is a rich phylum that includes thousands of marine species. In this study, we focused on Anthozoa and Hydrozoa that are represented by the Nematostella vectensis (Sea anemone) and Hydra magnipapillata genomes. We present a method for ranking the toxin-like candidates from complete proteomes of Cnidaria. Toxin-like functions were revealed using ClanTox, a statistical machine-learning predictor trained on ion channel inhibitors from venomous animals. Fundamental features that were emphasized in training ClanTox include cysteines and their spacing along the sequences. Among the 83,000 proteins derived from Cnidaria representatives, we found 170 candidates that fulfill the properties of toxin-like-proteins, the vast majority of which were previously unrecognized as toxins. An additional 394 short proteins exhibit characteristics of toxin-like proteins at a moderate degree of confidence. -
Preparing the Shaanxi-Qinling Mountains Integrated Ecosystem Management Project (Cofinanced by the Global Environment Facility)
Technical Assistance Consultant’s Report Project Number: 39321 June 2008 PRC: Preparing the Shaanxi-Qinling Mountains Integrated Ecosystem Management Project (Cofinanced by the Global Environment Facility) Prepared by: ANZDEC Limited Australia For Shaanxi Province Development and Reform Commission This consultant’s report does not necessarily reflect the views of ADB or the Government concerned, and ADB and the Government cannot be held liable for its contents. (For project preparatory technical assistance: All the views expressed herein may not be incorporated into the proposed project’s design. FINAL REPORT SHAANXI QINLING BIODIVERSITY CONSERVATION AND DEMONSTRATION PROJECT PREPARED FOR Shaanxi Provincial Government And the Asian Development Bank ANZDEC LIMITED September 2007 CURRENCY EQUIVALENTS (as at 1 June 2007) Currency Unit – Chinese Yuan {CNY}1.00 = US $0.1308 $1.00 = CNY 7.64 ABBREVIATIONS ADB – Asian Development Bank BAP – Biodiversity Action Plan (of the PRC Government) CAS – Chinese Academy of Sciences CASS – Chinese Academy of Social Sciences CBD – Convention on Biological Diversity CBRC – China Bank Regulatory Commission CDA - Conservation Demonstration Area CNY – Chinese Yuan CO – company CPF – country programming framework CTF – Conservation Trust Fund EA – Executing Agency EFCAs – Ecosystem Function Conservation Areas EIRR – economic internal rate of return EPB – Environmental Protection Bureau EU – European Union FIRR – financial internal rate of return FDI – Foreign Direct Investment FYP – Five-Year Plan FS – Feasibility -
No Evidence for the 'Rate-Of-Living' Theory Across the Tetrapod Tree of Life
Received: 23 June 2019 | Revised: 30 December 2019 | Accepted: 7 January 2020 DOI: 10.1111/geb.13069 RESEARCH PAPER No evidence for the ‘rate-of-living’ theory across the tetrapod tree of life Gavin Stark1 | Daniel Pincheira-Donoso2 | Shai Meiri1,3 1School of Zoology, Faculty of Life Sciences, Tel Aviv University, Tel Aviv, Israel Abstract 2School of Biological Sciences, Queen’s Aim: The ‘rate-of-living’ theory predicts that life expectancy is a negative function of University Belfast, Belfast, United Kingdom the rates at which organisms metabolize. According to this theory, factors that accel- 3The Steinhardt Museum of Natural History, Tel Aviv University, Tel Aviv, Israel erate metabolic rates, such as high body temperature and active foraging, lead to organismic ‘wear-out’. This process reduces life span through an accumulation of bio- Correspondence Gavin Stark, School of Zoology, Faculty of chemical errors and the build-up of toxic metabolic by-products. Although the rate- Life Sciences, Tel Aviv University, Tel Aviv, of-living theory is a keystone underlying our understanding of life-history trade-offs, 6997801, Israel. Email: [email protected] its validity has been recently questioned. The rate-of-living theory has never been tested on a global scale in a phylogenetic framework, or across both endotherms and Editor: Richard Field ectotherms. Here, we test several of its fundamental predictions across the tetrapod tree of life. Location: Global. Time period: Present. Major taxa studied: Land vertebrates. Methods: Using a dataset spanning the life span data of 4,100 land vertebrate spe- cies (2,214 endotherms, 1,886 ectotherms), we performed the most comprehensive test to date of the fundamental predictions underlying the rate-of-living theory. -
The Spatio-Temporal Dynamic Pattern of Rural Residential Land in China in the 1990S Using Landsat TM Images and GIS
Environ Manage (2007) 40:803–813 DOI 10.1007/s00267-006-0048-6 The Spatio-Temporal Dynamic Pattern of Rural Residential Land in China in the 1990s Using Landsat TM Images and GIS Guangjin Tian Æ Zhifeng Yang Æ Yaoqi Zhang Received: 8 February 2006 / Accepted: 2 February 2007 Ó Springer Science+Business Media, LLC 2007 Abstract Through interpreting Landsat TM images, this Keywords Rural residential land Á Spatio-temporal study analyzes the spatial distribution of rural settlements pattern Á Land-use change Á Remote sensing Á GIS Á in China in 2000. It calculates rural residential land per- China centage for every 1-km2 cell. The entire country is divided into 33 regions to investigate the spatio-temporal dynamic patterns of rural residential land during the 1990s. Introduction According to the remote sensing survey, the rural resi- dential land increased by 7.88 · 105 ha in the 1990s. The Although China has witnessed a rapid urbanization process increment of rural residential land was 0.55 million ha in after the late 1970s, 63.78% of the total population still live 1990–1995 and 0.23 million ha in 1995–2000. In 1990– in rural areas in 2000. Nearly 0.81 billion people are dis- 1995, rural residential land increased dramatically in the tributed in 0.73 million administrative villages (NSBC eastern regions such as the Yangtze River Delta, Pearl 2001). The rural residential land is the built-up area for River Delta, and North China Plain, accounting for 80.80% rural settlements. It includes buildings, roads, huts, vege- of the national growth; the expansion in the western table gardens, thickets, livestock enclosures, bare lands regions was much more moderate. -
Phylogenetic Relationship Among Hylidae and Mitochondrial Protein-Coding Gene Expression in Response to Freezing and Ano
See discussions, stats, and author profiles for this publication at: https://www.researchgate.net/publication/332083499 The complete mitochondrial genome of Dryophytes versicolor: Phylogenetic relationship among Hylidae and mitochondrial protein-coding gene expression in response to freezing and ano... Article in International Journal of Biological Macromolecules · March 2019 DOI: 10.1016/j.ijbiomac.2019.03.220 CITATIONS READS 5 209 6 authors, including: Jia-Yong Zhang Bryan E Luu Zhejiang Normal University McGill University 88 PUBLICATIONS 696 CITATIONS 29 PUBLICATIONS 193 CITATIONS SEE PROFILE SEE PROFILE Danna Yu Leping Zhang Zhejiang Normal University Westlake University 57 PUBLICATIONS 255 CITATIONS 18 PUBLICATIONS 104 CITATIONS SEE PROFILE SEE PROFILE Some of the authors of this publication are also working on these related projects: Hibernation Metabolomics View project New project: 1)The frog mitochondrial genome project: evolution of frog mitochondrial genomes and their gene expression View project All content following this page was uploaded by Jia-Yong Zhang on 08 April 2019. The user has requested enhancement of the downloaded file. International Journal of Biological Macromolecules 132 (2019) 461–469 Contents lists available at ScienceDirect International Journal of Biological Macromolecules journal homepage: http://www.elsevier.com/locate/ijbiomac The complete mitochondrial genome of Dryophytes versicolor: Phylogenetic relationship among Hylidae and mitochondrial protein-coding gene expression in response to freezing and -
Decoupling of Surface and Subsurface Sutures in the Dabie Orogen and a Continent-Collisional Lithospheric-Wedging Model: Sr-Nd-P
FORUMS Chinese Science Bulletin 2003 Vol. 48 No.8 831 838 Keywords: Dabie orogen, post-collisional tectonics, Mesozoic mafic igneous rocks in eastern China, Sr-Nd-Pb isotopic geochemistry. Decoupling of surface and DOI: 10.1360/01wd0554 subsurface sutures in the Based on the distribution of UHPM rocks on the surface in Sulu terrane, the surface suture between the Dabie orogen and a NCB and SCB should be located along the Wulian fault (see Fig. 1, S1). However, based on the aeromagnetic data continent-collisional of eastern China, Li[1] first indicated that the subsurface lithospheric-wedging model: suture between the NCB and SCB in the region east of the Tan-Lu fault should be located to the east of Nanjing City Sr-Nd-Pb isotopic evidences of (see Fig. 1, S2), which south displaced about 400 km from the surface suture. This is contradictory with the north- Mesozoic igneous rocks in ward subduction of the continental crust of the SCB. Li[1] proposed a crust detachment model for suturing to inter- eastern China pret such decoupling between the surface suture and sub- surface suture. LI Shuguang & YANG Wei In a geochemical study of Cenozoic basalts in School of Earth and Space Sciences, University of Science and Technol- eastern China, Chung observed that the Sr-Nd-Pb isotopic ogy of China, Hefei 230026, China features of Cenozoic basalts in the Liuhe area north of the Nanjing (see Fig. 1) are similar to those of Cenozoic ba- Abstract There are significant differences of Nd and Pb [2] isotopic compositions between Mesozoic mafic igneous rocks salts in the NCB, but different from those in the SCB .