Fish Diversity and Assemblages According to Distance from Source Along a Coastal River Gradient (Ehania River; South- East of Ivory Coast)
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§4-71-6.5 LIST of CONDITIONALLY APPROVED ANIMALS November
§4-71-6.5 LIST OF CONDITIONALLY APPROVED ANIMALS November 28, 2006 SCIENTIFIC NAME COMMON NAME INVERTEBRATES PHYLUM Annelida CLASS Oligochaeta ORDER Plesiopora FAMILY Tubificidae Tubifex (all species in genus) worm, tubifex PHYLUM Arthropoda CLASS Crustacea ORDER Anostraca FAMILY Artemiidae Artemia (all species in genus) shrimp, brine ORDER Cladocera FAMILY Daphnidae Daphnia (all species in genus) flea, water ORDER Decapoda FAMILY Atelecyclidae Erimacrus isenbeckii crab, horsehair FAMILY Cancridae Cancer antennarius crab, California rock Cancer anthonyi crab, yellowstone Cancer borealis crab, Jonah Cancer magister crab, dungeness Cancer productus crab, rock (red) FAMILY Geryonidae Geryon affinis crab, golden FAMILY Lithodidae Paralithodes camtschatica crab, Alaskan king FAMILY Majidae Chionocetes bairdi crab, snow Chionocetes opilio crab, snow 1 CONDITIONAL ANIMAL LIST §4-71-6.5 SCIENTIFIC NAME COMMON NAME Chionocetes tanneri crab, snow FAMILY Nephropidae Homarus (all species in genus) lobster, true FAMILY Palaemonidae Macrobrachium lar shrimp, freshwater Macrobrachium rosenbergi prawn, giant long-legged FAMILY Palinuridae Jasus (all species in genus) crayfish, saltwater; lobster Panulirus argus lobster, Atlantic spiny Panulirus longipes femoristriga crayfish, saltwater Panulirus pencillatus lobster, spiny FAMILY Portunidae Callinectes sapidus crab, blue Scylla serrata crab, Samoan; serrate, swimming FAMILY Raninidae Ranina ranina crab, spanner; red frog, Hawaiian CLASS Insecta ORDER Coleoptera FAMILY Tenebrionidae Tenebrio molitor mealworm, -
Transcriptome Ortholog Alignment Sequence Tools (TOAST) for Phylogenomic Dataset Assembly
Transcriptome Ortholog Alignment Sequence Tools (TOAST) for Phylogenomic Dataset Assembly Dustin J. Wcisel North Carolina State University J. Thomas Howard North Carolina State University Jeffrey A. Yoder North Carolina State University Alex Dornburg ( [email protected] ) NC Museum of Natural Sciences https://orcid.org/0000-0003-0863-2283 Software Keywords: BUSCO ortholog assembly, Cetacean and teleost sh phylogeny, Missing Data Visualization, Transcriptome, Concatenated Alignment Posted Date: March 12th, 2020 DOI: https://doi.org/10.21203/rs.2.16269/v4 License: This work is licensed under a Creative Commons Attribution 4.0 International License. Read Full License Version of Record: A version of this preprint was published at BMC Evolutionary Biology on March 30th, 2020. See the published version at https://doi.org/10.1186/s12862-020-01603-w. Page 1/18 Abstract Background Advances in next-generation sequencing technologies have reduced the cost of whole transcriptome analyses, allowing characterization of non-model species at unprecedented levels. The rapid pace of transcriptomic sequencing has driven the public accumulation of a wealth of data for phylogenomic analyses, however lack of tools aimed towards phylogeneticists to eciently identify orthologous sequences currently hinders effective harnessing of this resource. Results We introduce TOAST, an open source R software package that can utilize the ortholog searches based on the software Benchmarking Universal Single-Copy Orthologs (BUSCO) to assemble multiple sequence alignments of orthologous loci from transcriptomes for any group of organisms. By streamlining search, query, and alignment, TOAST automates the generation of locus and concatenated alignments, and also presents a series of outputs from which users can not only explore missing data patterns across their alignments, but also reassemble alignments based on user-dened acceptable missing data levels for a given research question. -
A Review of the Systematic Biology of Fossil and Living Bony-Tongue Fishes, Osteoglossomorpha (Actinopterygii: Teleostei)
Neotropical Ichthyology, 16(3): e180031, 2018 Journal homepage: www.scielo.br/ni DOI: 10.1590/1982-0224-20180031 Published online: 11 October 2018 (ISSN 1982-0224) Copyright © 2018 Sociedade Brasileira de Ictiologia Printed: 30 September 2018 (ISSN 1679-6225) Review article A review of the systematic biology of fossil and living bony-tongue fishes, Osteoglossomorpha (Actinopterygii: Teleostei) Eric J. Hilton1 and Sébastien Lavoué2,3 The bony-tongue fishes, Osteoglossomorpha, have been the focus of a great deal of morphological, systematic, and evolutio- nary study, due in part to their basal position among extant teleostean fishes. This group includes the mooneyes (Hiodontidae), knifefishes (Notopteridae), the abu (Gymnarchidae), elephantfishes (Mormyridae), arawanas and pirarucu (Osteoglossidae), and the African butterfly fish (Pantodontidae). This morphologically heterogeneous group also has a long and diverse fossil record, including taxa from all continents and both freshwater and marine deposits. The phylogenetic relationships among most extant osteoglossomorph families are widely agreed upon. However, there is still much to discover about the systematic biology of these fishes, particularly with regard to the phylogenetic affinities of several fossil taxa, within Mormyridae, and the position of Pantodon. In this paper we review the state of knowledge for osteoglossomorph fishes. We first provide an overview of the diversity of Osteoglossomorpha, and then discuss studies of the phylogeny of Osteoglossomorpha from both morphological and molecular perspectives, as well as biogeographic analyses of the group. Finally, we offer our perspectives on future needs for research on the systematic biology of Osteoglossomorpha. Keywords: Biogeography, Osteoglossidae, Paleontology, Phylogeny, Taxonomy. Os peixes da Superordem Osteoglossomorpha têm sido foco de inúmeros estudos sobre a morfologia, sistemática e evo- lução, particularmente devido à sua posição basal dentre os peixes teleósteos. -
Genetic Diversity and Population Structure of the Critically Endangered Freshwater Fish Species, the Clanwilliam Sandfish (Labeo Seeberi)
Genetic Diversity and Population Structure of the critically endangered freshwater fish species, the Clanwilliam sandfish (Labeo seeberi) By Shaun Francois Lesch Thesis presented in partial fulfilment of the requirements for the degree of Master of Science in the Faculty of Natural Science at Stellenbosch University Supervisor: Dr C. Rhode Co-supervisor: Dr R. Slabbert Department of Genetics December 2020 Stellenbosch University https://scholar.sun.ac.za Declaration: By submitting this thesis electronically, I declare that the entirety of the work contained therein is my own, original work, that I am the sole author thereof (save to the extent explicitly otherwise stated), that reproduction and publication thereof by Stellenbosch University will not infringe any third party rights and that I have not previously in its entirety or in part submitted it for obtaining any qualification. Date: December 2020 Copyright © 2020 Stellenbosch University All Rights Reserved i Stellenbosch University https://scholar.sun.ac.za Abstract: Labeo spp. are large freshwater fish found throughout southern Asia, the Middle East and Africa. The genus is characterised by specialised structures around the mouth and lips making it adapted to herbivorous feeding (algae and detritus). Clanwilliam sandfish (Labeo seeberi) was once widespread throughout its natural habitat (Olifants-Doring River system), but significant decreases in population size have seen them become absent in the Olifants River and retreat to the headwaters in the tributaries of the Doring River. Currently sandfish are confined to three populations namely the Oorlogskloof Nature Reserve (OKNR), Rietkuil (Riet) and Bos, with OKNR being the largest of the three and deemed the species sanctuary. -
Assessment of Fecundity of Brycinus Macrolepidotus in Akomoje Water Reservoir, Abeokuta, South West, Nigeria
Egyptian Journal of Aquatic Biology & Fisheries Zoology Department, Faculty of Science, Ain Shams University, Cairo, Egypt. ISSN 1110 – 6131 Vol. 23(1): 245 -252 (2019) www.ejabf.journals.ekb.eg Assessment of fecundity of Brycinus macrolepidotus in Akomoje water reservoir, Abeokuta, South West, Nigeria Ajiboye, Elijah Olusegun1; Adeosun, Festus Idowu1*; Oghenochuko, Mavis Titilayo Oghenebrorhie1, 2 1- Department of Aquaculture and Fisheries Management, Federal University of Agriculture, Abeokuta, Ogun State, Nigeria 2- Animal Science Program, Department of Agriculture, Landmark University, Omu-Aran, Kwara State, Nigeria ARTICLE INFO ABSTRACT Article History: Overfishing and threat of extinction globally has been a topic of Received: Nov. 23, 2018 concern in the fisheries sub-sector over the years. This study assessed Accepted: Jan.30, 2019 some aspect of the biology of Brycinus macrolepidotus in Akomoje Online: Feb. 2019 reservoir, lower River Ogun, Nigeria. A total number of 838 fish _______________ specimens were collected bi-monthly for a nine month period from commercial catches using cast nets and long line. A total number of 51 Keywords: mature female were selected for fecundity analysis which was limited to Brycinus macrolepidotus only sexually gravid female fish. Length and weight of experimental fish Akomoje reservoir were measured. Data were subjected to analysis of variance (ANOVA), Fecundity descriptive and inferential statistics. Correlation statistics was carried out Abeokuta to ascertain relationship between absolute and relative fecundity with Nigeria length and weight of fish. Length and weight of experimental fish ranged between 14.5-39.4 cm and 938-1956 g. The relative fecundity ranged between 441 and 3,597 eggs with a mean of 1,702±0.16 eggs while absolute fecundity ranged from 5,838 to 39,208 eggs with a mean of 14,326±0.52 eggs. -
Teleostei, Osteoglossiformes) in the Continental Lower Cretaceous of the Democratic Republic of Congo (Central Africa
Geo-Eco-Trop., 2015, 39, 2 : 247-254 On the presence of a second osteoglossid fish (Teleostei, Osteoglossiformes) in the continental Lower Cretaceous of the Democratic Republic of Congo (Central Africa) Sur la présence d’un second poisson ostéoglossidé (Teleostei, Osteoglossiformes) dans le Crétacé inférieur continental de la République Démocratique du Congo (Afrique centrale) Louis TAVERNE 1 Résumé: Un hyomandibulaire de téléostéen découvert dans les couches de la Formation de la Loia (Aptien- Albien continental) à Yakoko, sur la rivière Lomami, Province Centrale, République Démocratique du Congo, est décrit et ses relations phylogénétiques sont discutées. L’os est grand et porte un processus operculaire très allongé. Des comparaisons avec d’autres téléostéens du Crétacé inférieur continental indiquent que cet hyomandibulaire appartient à un ostéoglossidé qui semble proche de Paralycoptera. Mots-clés: Teleostei, Osteoglossidae, hyomandibulaire, Formation de la Loia, Crétacé inférieur continental, Yakoko, République Démocratique du Congo Abstract: A teleost hyomandibula discovered in the deposits of the Loia Formation (continental Aptian- Albian) at Yakoko, on the Lomami River, Central Province, Democratic Republic of Congo, is described and its phylogenetic relationships are discussed. The bone is rather large and bears an extremely long opercular process. Comparisons with other freshwater Early Cretaceous teleosts indicate that this hyomandibula belongs to an osteoglossid fish that seems close to Paralycoptera. Key words: Teleostei, Osteoglossidae, hyomandibula, Loia Formation, continental Early Cretaceous, Yakoko, Democratic Republic of Congo. INTRODUCTION The Loia and the Bokungu Formations are respectively the lower and the upper strata within the continental Early Cretaceous deposits of the Congolese Cuvette and the surrounding zones, in the Democratic Republic of Congo (CAHEN et al., 1959, 1960; CASIER, 1961). -
A Review of the Systematic Biology of Fossil and Living Bony-Tongue Fishes, Osteoglossomorpha (Actinopterygii: Teleostei)" (2018)
W&M ScholarWorks VIMS Articles Virginia Institute of Marine Science 2018 A review of the systematic biology of fossil and living bony- tongue fishes, Osteoglossomorpha (Actinopterygii: Teleostei) Eric J. Hilton Virginia Institute of Marine Science Sebastien Lavoue Follow this and additional works at: https://scholarworks.wm.edu/vimsarticles Part of the Aquaculture and Fisheries Commons Recommended Citation Hilton, Eric J. and Lavoue, Sebastien, "A review of the systematic biology of fossil and living bony-tongue fishes, Osteoglossomorpha (Actinopterygii: Teleostei)" (2018). VIMS Articles. 1297. https://scholarworks.wm.edu/vimsarticles/1297 This Article is brought to you for free and open access by the Virginia Institute of Marine Science at W&M ScholarWorks. It has been accepted for inclusion in VIMS Articles by an authorized administrator of W&M ScholarWorks. For more information, please contact [email protected]. Neotropical Ichthyology, 16(3): e180031, 2018 Journal homepage: www.scielo.br/ni DOI: 10.1590/1982-0224-20180031 Published online: 11 October 2018 (ISSN 1982-0224) Copyright © 2018 Sociedade Brasileira de Ictiologia Printed: 30 September 2018 (ISSN 1679-6225) Review article A review of the systematic biology of fossil and living bony-tongue fishes, Osteoglossomorpha (Actinopterygii: Teleostei) Eric J. Hilton1 and Sébastien Lavoué2,3 The bony-tongue fishes, Osteoglossomorpha, have been the focus of a great deal of morphological, systematic, and evolutio- nary study, due in part to their basal position among extant teleostean fishes. This group includes the mooneyes (Hiodontidae), knifefishes (Notopteridae), the abu (Gymnarchidae), elephantfishes (Mormyridae), arawanas and pirarucu (Osteoglossidae), and the African butterfly fish (Pantodontidae). This morphologically heterogeneous group also has a long and diverse fossil record, including taxa from all continents and both freshwater and marine deposits. -
Ichthyological Exploration of Freshwaters an International Journal for Field-Orientated Ichthyology
Verlag Dr. Friedrich Pfeil ISSN 0936-9902 Excerpt from Ichthyological Exploration of Freshwaters An international journal for field-orientated ichthyology Volume 28 Number 2 This article may be used for research, teaching and private purposes. Exchange with other researchers is allowed on request only. Any substantial or systematic reproduction, re-distribution, re-selling in any form to anyone, in particular deposition in a library, institutional or private website, or ftp-site for public access, is expressly forbidden. Ichthyological Exploration of Freshwaters An international journal for field-orientated ichthyology Volume 28 • Number 2 • January 2018 pages 97-192, 40 figs., 14 tabs. Managing Editor Paulo H. F. Lucinda, Laboratório de Ictiologia Sistemática, Universidade Federal do Tocantins, P.O. Box 136, 77500-000 Porto Nacional, TO, Brazil E-mail [email protected] Honorary Editor Maurice Kottelat, Rue des Rauraques 6, CH-2800 Delémont, Switzerland Associate Editors Ralf Britz, Department of Zoology, The Natural History Museum, London, United Kingdom Kevin W. Conway, Department of Wildlife and Fisheries Sciences, Texas A&M University, College Station, USA Jörg Freyhof, Leibniz-Institute of Freshwater Ecology and Inland Fisheries, Berlin, Germany Sven O. Kullander, Naturhistoriska Riksmuseet, Stockholm, Sweden Heok Hee Ng, Lee Kong Chian Natural History Museum, National University of Singapore, Singapore Editorial Advisory Board Helen K. Larson, Museum and Art Gallery of the Northern Territory, Darwin, Australia Lukas Rüber, Naturhistorisches Museum, Bern, Switzerland Ivan Sazima, Museu de Zoologia, Unicamp, Campinas, Brazil Paul H. Skelton, South African Institute for Aquatic Biodiversity, Grahamstown, South Africa Tan Heok Hui, Lee Kong Chian Natural History Museum, National University of Singapore, Singapore Ichthyological Exploration of Freshwaters is published quarterly Subscriptions should be addressed to the Publisher: Verlag Dr. -
Belgian Journal of Zoology
Belgian Journal of Zoology Published by the “KONINKLIJKE BELGISCHE VERENIGING VOOR DIERKUNDE — SOCIÉTÉ ROYALE ZOOLOGIQUE DE BELGIQUE” Volume 137 (1) (January, 2007) Managing Editor of the Journal: Ronny Blust Department of Biology/EBT University of Antwerp, Campus Groenenborger B-2020 Antwerp (Belgium) Printed in Belgium (May 2007) by Drukkerij George Michiels, N.V., Tongeren Belg. J. Zool., 137 (1) : 3-9 January 2007 Habitudes alimentaires de Brycinus longipinnis dans le complexe fluvio-lacustre de la Bia, Côte d’Ivoire Yéhé Mathieu Dietoa 1, Germain Gourène 1 & Allassane Ouattara 1 1 Université d’Abobo-Adjamé‚ UFR-SGE, Laboratoire d’Environnement et Biologie Aquatique, 02 B.P. 801 Abidjan 02, Côte d’Ivoire. Corresponding author : Germain Gourène, e-mail : [email protected]. RÉSUMÉ. Le régime alimentaire de 171 spécimens de Brycinus longipinnis a été étudié en fonction de la taille, des stations et des saisons hydrologiques. L’échantillonnage a porté sur 24 prélèvements mensuels. Le plan d’eau concerné est la rivière Bia sur laquelle a été construit en 1959 un barrage hydroélectrique. L’indice d’importance relative combinant les pourcentages d’occur- rence, numérique et pondéral a été utilisé. Il apparaît que l’espèce indiquée est omnivore. Elle consomme des macrophytes ainsi que des invertébrés terrestres et aquatiques avec comme aliments principaux les Chironomidae et les Formicidae. En amont du bar- rage de retenue, le régime alimentaire de B. longipinnis varie en fonction de la taille des individus. Il est également fonction des saisons hydrologiques dans toutes les stations (amont, aval, lac). MOTS CLÉS : Alestidae, Brycinus longipinnis, habitudes alimentaires, complexe fluvio-lacustre, bassin Bia, Afrique occidentale. -
Analysis of the Fecundity and Gonadal Stages of African Carp, Labeo
30438 Abobi et al./ Elixir Appl. Zoology 79 (2015) 30438-30443 Available online at www.elixirpublishers.com (Elixir International Journal) Applied Zoology Elixir Appl. Zoology 79 (2015) 30438-30443 Analysis of the Fecundity and Gonadal stages of African carp, Labeo senegalensis (Valenciennes, 1842) from the White Volta, Ghana Abobi S.M*, Alhassan E.H and Asare I.O Department of Fisheries and Aquatic Resources Management, University for Development Studies. P.O. Box TL 1882 Tamale, Ghana. ARTICLE INFO ABSTRACT Article history: One hundred and fifty specimen of Labeo senegalensis caught by gill nets from the Received: 14 December 2014; White Volta at Yapei, Ghana were examined for the stages of gonad maturity, eggs, Received in revised form: length-weight relationship (LWR) and condition factor during the dry season of 2013. 20 January 2015; Out of the 150 specimen, 89 were females and 61 were males. The sex ratio of males to Accepted: 12 February 2015; females was thus 1: 1.5. Eleven out of the 89 females were found to contain gonads. The stages of gonad maturity ranged from immature stage to maturity stage. The total eggs Keywords found in the eleven female was 2,385 with a mean value of 217 eggs per gravid female White Volta, Condition factor, of the species. The Gonado- Somatic Index ranged from 1.29 to 3.28 with a mean of 2.0 Length weight relationship ± 0.57. The total length of Labeo senegalensis ranged from 9.5 cm- 24.6 cm with a Gonad, mean of 16.0 cm ± 2.86 cm. -
Relict Tropical Fish Fauna in Central Sahara
39 Iclitliyol. Explor. Freshwaters, Vol. 1, No. 1, pp. 39-48,2 figs., 1 tab., January 1990 O 1990 by Verlag Dr. Friedrich Pfeil, München, FRG - ISSN 0936-9902 Relict tropical fish fauna in Central Sahara Christian Lévêque * Following a taxonomic revision of freshwater fishes recorded from the Sahara, an updated species list is given. It appears that most species collected in small water bodies are relict populations of widespread species occuring in surrounding river basins, except for Barbus apleurogramina which might be a relict of a more ancient fish fauna. Distribution patterns are discussed in view of the supposed extent of river catchments during the Holocene. Une révision taxinomique des espèces de poissons récoltées dans le Sahara a permis de dresser une liste actualisée prenant en compte les connaissances récentes. I1 apparaît que la plupart des espèces collectées dans les petites collections d'eau sont des populations reliques d'espèces largement répandues dans les bassins hydrographiques voisins, àl'exception de Barbus npleurogranana qui pourrait être un vestige d'une faune plus ancienne. La distribution actuelle est discutée, à la lumière des données sur l'extension supposée des bassins hydrographiques durant l'Holocène. Introduction taxonomic revisions, it turned out that confusion existed in the identificationof some species, often Since the begining of this century, numerous based on small specimens, sometimes poorly Saharan expeditions were able to collect several preserved. The aim of this paper is to give an fish species in the widely scattered and isolated updated taxonomic review of the relict fish small patches of water in this area (Daget, 1959a, populations in the Sahara, and to discuss their 1968; Dumont, 1979, 1987; Estève. -
ASFIS ISSCAAP Fish List February 2007 Sorted on Scientific Name
ASFIS ISSCAAP Fish List Sorted on Scientific Name February 2007 Scientific name English Name French name Spanish Name Code Abalistes stellaris (Bloch & Schneider 1801) Starry triggerfish AJS Abbottina rivularis (Basilewsky 1855) Chinese false gudgeon ABB Ablabys binotatus (Peters 1855) Redskinfish ABW Ablennes hians (Valenciennes 1846) Flat needlefish Orphie plate Agujón sable BAF Aborichthys elongatus Hora 1921 ABE Abralia andamanika Goodrich 1898 BLK Abralia veranyi (Rüppell 1844) Verany's enope squid Encornet de Verany Enoploluria de Verany BLJ Abraliopsis pfefferi (Verany 1837) Pfeffer's enope squid Encornet de Pfeffer Enoploluria de Pfeffer BJF Abramis brama (Linnaeus 1758) Freshwater bream Brème d'eau douce Brema común FBM Abramis spp Freshwater breams nei Brèmes d'eau douce nca Bremas nep FBR Abramites eques (Steindachner 1878) ABQ Abudefduf luridus (Cuvier 1830) Canary damsel AUU Abudefduf saxatilis (Linnaeus 1758) Sergeant-major ABU Abyssobrotula galatheae Nielsen 1977 OAG Abyssocottus elochini Taliev 1955 AEZ Abythites lepidogenys (Smith & Radcliffe 1913) AHD Acanella spp Branched bamboo coral KQL Acanthacaris caeca (A. Milne Edwards 1881) Atlantic deep-sea lobster Langoustine arganelle Cigala de fondo NTK Acanthacaris tenuimana Bate 1888 Prickly deep-sea lobster Langoustine spinuleuse Cigala raspa NHI Acanthalburnus microlepis (De Filippi 1861) Blackbrow bleak AHL Acanthaphritis barbata (Okamura & Kishida 1963) NHT Acantharchus pomotis (Baird 1855) Mud sunfish AKP Acanthaxius caespitosa (Squires 1979) Deepwater mud lobster Langouste