Acta Oceanologica Sinica Vol. 33 (2014) contents I
Vol. 33 (2014) contents
Number 1 Page 1 ············· Review and suggestions for estimating particulate organic carbon and dissolved organic carbon inventories in the ocean using remote sensing data PAN Delu, LIU Qiong, BAI Yan 11············ Interbasin exchanges and their roles in global ocean circulation: A study based on 1 400 years’ spin up of MOM4p1 ZHU Yaohua, WEI zexun, FANG Guohong, WANG Yonggang, GUAN Yuping 24············ Effects of Stokes production on summer ocean shelf dynamics ZHANG Xuefeng, HANGuijun, WANG Xidong, ZHANG Lianxin 35············ A numerical study on the impact of tidal waves on the storm surge in the north of Liaodong Bay KONG Xiangpeng 42············ Estimation of eddy heat transport in the global ocean from Argo data ZHANG Zhiwei, ZHONG Yisen, TIAN Jiwei, YANG Qingxuan, ZHAO Wei 48············ An analysis on the error structure and mechanism of soil moisture and ocean salinity remotely sensed sea surface salinity products CHEN Jian, ZHANG Ren, WANG Huizan, AN Yuzhu, WANG Luhua, WANG Gongjie 56············ A modified discrete element model for sea ice dynamics LI Baohui, LI Hai, LIU Yu, WANG Anliang, JI Shunying 64············ How does the Indian Ocean subtropical dipole trigger the tropical Indian Ocean dipole via the Mascarene high? FENG Junqiao, HU Dunxin, YU Lejiang 77············ Effect of nonlinear advection on the Indian Ocean diploe asymmetry WANG Yu, LAN Jian, CUI Fengjuan 83············ Using a mesoscale ensemble to predict forecast error and perform targeted observation DU Jun, YU Rucong, CUI Chunguang, LI Jun 92············ An assessment of global ocean wave energy resources over the last 45 a ZHENG Chongwei, SHAO Longtan, SHI Wenli, SU Qin, LIN Gang, LI Xunqiang, CHEN Xiaobin 102············ Polarimetric entropy of the ocean surface with a two-scale scattering model WANG Wenguang, LI Haiyan, SONG Xingai 109············ Assessment of the initial sea surface temperature product of the scanning microwave radiometer aboard on HY-2 satellite ZHAO Yili, ZHU Jianhua, LIN Mingsen, CHEN Chuntao, HUANG Xiaoqi, WANG He, ZHANG Youguang, PENG Hailong 114············ A preliminary assessment of the sea surface wind speed production of HY-2 scanning microwave radiometer HUANG Xiaoqi, ZHU Jianhua, LIN Mingsen, ZHAO Yili, WANG He, CHEN Chuntao, PENG Hailong, ZHANG Youguang 120············ Priori knowledge based a bathymetry assessment method using the sun glitter imagery: a case study of sand waves on the Taiwan Banks SHAOHao,LIYan,LILi 127············ Intercomparison of GPS radiosonde soundings during the eastern tropical Indian Ocean experiment XIE Qiang, HUANG Ke, WANG Dongxiao, YANG Lei, CHEN Ju, WU Zewen, LI Daning, LIANG Zhiyan 135············ Interaction between Chlorella vulgaris and bacteria: interference and resource competition QU Liang, WANG Renjun, ZHAO Peng, CHEN Ruinan, ZHOU Wenli, TANG Liuqing, TANG Xuexi
Number 2
Page 1 Transcriptome sequencing of essential marine brown and red algal species in China and its significance in algal biology and phylogeny WU Shuangxiu, SUN Jing, CHI Shan, WANG Liang, WANG Xumin, LIU Cui, LI Xingang, YIN Jinlong, LIU Tao, YU Jun 13 Transcriptome-wide evolutionary analysis on essential brown algae (Phaeophyceae) in China SUN Jing, WANG Liang, WU Shuangxiu, WANG Xumin, XIAO Jingfa, CHI Shan, LIU Cui, REN Lufeng, ZHAO Yuhui, LIU Tao, YU Jun 20 Transcriptome characterization of Ishige okamurae (Phaeophyceae) shows strong environmental acclimation QU Jieqiong, WANG Xumin, CHI Shan, WU Shuangxiu, SUN Jing, LIU Cui, CHEN Shengping, YU Jun, LIU Tao 27 Analysis of Saccharina japonica transcriptome using the high-throughput DNA sequencing technique and its vanadium-dependent haloperoxidase gene LIANG Xiayuan, WANG Xumin, CHI Shan, WU Shuangxiu, SUN Jing, LIU Cui, CHEN Shengping, YU Jun, LIU Tao 37 Comparative analysis on transcriptome sequencings of six Sargassum species in China WANG Guoliang, SUN Jing, LIU Guiming, WANG Liang, YU Jun, LIU Tao, CHI Shan, LIU Cui, GUO Haiyan, WANG Xumin, WU Shuangxiu 45 De novo sequencing and comparative analysis of three red algal species of Family Solieriaceae to discover putative genes associated with carrageenan biosysthesis SONG Lipu, WU Shuangxiu, SUN Jing, WANG Liang, LIU Tao, CHI Shan, LIU Cui, LI Xingang, YIN Jinlong, WANG Xumin, YU Jun 54 Comparative analysis of four essential Gracilariaceae species in China based on whole transcriptomic sequencing XU Jiayue, SUN Jing, YIN Jinlong, WANG Liang, WANG Xumin, LIU Tao, CHI Shan, LIU Cui, REN Lufeng, WU Shuangxiu, YU Jun 63 Tryptophan synthase of Phaeophyceae originated from the secondary host nucleus ZHANG Yalan, CHI Shan, WU Shuangxiu, LIU Cui, YU Jun, WANG Xumin, CHEN Shengping, LIU Tao 73 Origin and evolution of alginate-c5-mannuronan-epimerase gene based on transcriptomic analysis of brown algae WANG Ren, WANG Xumin, ZHANG Yalan, YU Jun, LIU Tao, CHEN Shengping, CHI Shan 86 Phylogenomic analysis of transcriptomic sequences of mitochondria and chloroplasts for marine red algae (Rhodophyta) in China JIA Shangang, WANG Xumin, QIAN Hao, LI Tianyong, SUN Jing, WANG Liang,YU Jun, LI Xingang, YIN Jinlong, LIU Tao, WU Shuangxiu 94 Phylogenomic analysis of transcriptomic sequences of mitochondria and chloroplasts of essential brown algae (Phaeophyceae) in China JIA Shangang, WANG Xumin, LI Tianyong, QIAN Hao, SUN Jing, WANG Liang, YU Jun, REN Lufeng, YIN Jinlong, LIU Tao, WU Shuangxiu 102 Endogenous viral elements in algal genomes WANG Liang, WU Shuangxiu, LIU Tao, SUN Jing, CHI Shan, LIU Cui, LI Xingang, YIN Jinlong, WANG Xumin, YU Jun 108 The discovery of archaea origin phosphomannomutase in algae based on the algal transcriptome FENG Yanjing, CHI Shan, LIU Cui, CHEN Shengping, YU Jun, WANG Xumin, LIU TaP PageII Acta Oceanologica Sinica Vol. 33 (2014) contents 1 Transcriptome sequencing of essential marine brown and red algal species in China and its significance in algal biology and phylogeny WU Shuangxiu, SUN Jing, CHI Shan, WANG Liang, WANG Xumin, LIU Cui, LI Xingang, YIN Jinlong, LIU Tao, YU Jun 13 Transcriptome-wide evolutionary analysis on essential brown algae (Phaeophyceae) in China SUN Jing, WANG Liang, WU Shuangxiu, WANG Xumin, XIAO Jingfa, CHI Shan, LIU Cui, REN Lufeng, ZHAO Yuhui, LIU Tao, YU Jun 20 Transcriptome characterization of Ishige okamurae (Phaeophyceae) shows strong environmental acclimation QU Jieqiong, WANG Xumin, CHI Shan, WU Shuangxiu, SUN Jing, LIU Cui, CHEN Shengping, YU Jun, LIU Tao 27 Analysis of Saccharina japonica transcriptome using the high-throughput DNA sequencing technique and its vanadium-dependent haloperoxidase gene LIANG Xiayuan, WANG Xumin, CHI Shan, WU Shuangxiu, SUN Jing, LIU Cui, CHEN Shengping, YU Jun, LIU Tao 37 Comparative analysis on transcriptome sequencings of six Sargassum species in China WANG Guoliang, SUN Jing, LIU Guiming, WANG Liang, YU Jun, LIU Tao, CHI Shan, LIU Cui, GUO Haiyan, WANG Xumin, WU Shuangxiu 45 De novo sequencing and comparative analysis of three red algal species of Family Solieriaceae to discover putative genes associated with carrageenan biosysthesis SONG Lipu, WU Shuangxiu, SUN Jing, WANG Liang, LIU Tao, CHI Shan, LIU Cui, LI Xingang, YIN Jinlong, WANG Xumin, YU Jun 54 Comparative analysis of four essential Gracilariaceae species in China based on whole transcriptomic sequencing XU Jiayue, SUN Jing, YIN Jinlong, WANG Liang, WANG Xumin, LIU Tao, CHI Shan, LIU Cui, REN Lufeng, WU Shuangxiu, YU Jun 63 Tryptophan synthase of Phaeophyceae originated from the secondary host nucleus ZHANG Yalan, CHI Shan, WU Shuangxiu, LIU Cui, YU Jun, WANG Xumin, CHEN Shengping, LIU Tao 73 Origin and evolution of alginate-c5-mannuronan-epimerase gene based on transcriptomic analysis of brown algae WANG Ren, WANG Xumin, ZHANG Yalan, YU Jun, LIU Tao, CHEN Shengping, CHI Shan 86 Phylogenomic analysis of transcriptomic sequences of mitochondria and chloroplasts for marine red algae (Rhodophyta) in China JIA Shangang, WANG Xumin, QIAN Hao, LI Tianyong, SUN Jing, WANG Liang,YU Jun, LI Xingang, YIN Jinlong, LIU Tao, WU Shuangxiu 94 Phylogenomic analysis of transcriptomic sequences of mitochondria and chloroplasts of essential brown algae (Phaeophyceae) in China JIA Shangang, WANG Xumin, LI Tianyong, QIAN Hao, SUN Jing, WANG Liang, YU Jun, REN Lufeng, YIN Jinlong, LIU Tao, WU Shuangxiu 102 Endogenous viral elements in algal genomes WANG Liang, WU Shuangxiu, LIU Tao, SUN Jing, CHI Shan, LIU Cui, LI Xingang, YIN Jinlong, WANG Xumin, YU Jun 108 The discovery of archaea origin phosphomannomutase in algae based on the algal transcriptome FENG Yanjing, CHI Shan, LIU Cui, CHEN Shengping, YU Jun, WANG Xumin, LIU TaP
Number 3 Page 1 Energetics of lateral eddy diffusion/advection: Part I. Thermodynamics and energetics of vertical eddy diffusion HUANG Rui Xin 19 Energetics of lateral eddy diffusion/advection: Part II. Numerical diffusion/diffusivity and gravitational potential energy change due to isopycnal diffusion HUANG Rui Xin 40 Energetics of lateral eddy diffusion/advection: Part III. Energetics of horizontal and isopycnal diffusion/advection HUANG Rui Xin 58 Energetics of lateral eddy diffusion/advection: Part IV. Energetics of diffusion/advection in sigma coordinates and other coordinates HUANG Rui Xin 82 Mooring observations of internal solitary waves in the deep basin west of Luzon Strait HUANG Xiaodong, ZHAO Wei, TIAN Jiwei, YANG Qingxuan 90 Numerical study on tidal currents and seawater exchange in the Benoa Bay, Bali, Indonesia HENDRAWAN I Gede, ASAI Koji 101 Seasonal variations of air-sea heat fluxes and sea surface temperature in the northwestern Pacific marginal seas LIU Na, WU Dexing, LIN Xiaopei, MENG Qingjia 111 The structural characteristics of precipitation in Asian-Pacific’s three monsoon regions measured by tropical rainfall measurement mission LI Jiangnan, ZHENG Yanping, LI Fangzhou, GUO Feiyun, LI Weibiao 118 Influence of mesoscale eddies on primary production in the South China Sea during spring inter-monsoon period HU Zifeng, TAN Yehui, SONG Xingyu, ZHOU Linbin, LIAN Xiping, HUANG Liangmin, HE Yinghui 129 Wind vector retrieval algorithm from spaceborne lidar data WANG Tianyu, PAN Delu, HE Xianqiang, WANG Difeng Page 1 Energetics of lateral eddy diffusion/advection: Part I. Thermodynamics and energetics of vertical eddy diffusion HUANG Rui Xin 19 Energetics of lateral eddy diffusion/advection: Part II. Numerical diffusion/diffusivity and gravitational potential energy change due to isopycnal diffusion HUANG Rui Xin 40 Energetics of lateral eddy diffusion/advection: Part III. Energetics of horizontal and isopycnal diffusion/advection Acta Oceanologica Sinica Vol. 33 (2014) contents III HUANG Rui Xin 58 Energetics of lateral eddy diffusion/advection: Part IV. Energetics of diffusion/advection in sigma coordinates and other coordinates HUANG Rui Xin 82 Mooring observations of internal solitary waves in the deep basin west of Luzon Strait HUANG Xiaodong, ZHAO Wei, TIAN Jiwei, YANG Qingxuan 90 Numerical study on tidal currents and seawater exchange in the Benoa Bay, Bali, Indonesia HENDRAWAN I Gede, ASAI Koji 101 Seasonal variations of air-sea heat fluxes and sea surface temperature in the northwestern Pacific marginal seas LIU Na, WU Dexing, LIN Xiaopei, MENG Qingjia 111 The structural characteristics of precipitation in Asian-Pacific’s three monsoon regions measured by tropical rainfall measurement mission LI Jiangnan, ZHENG Yanping, LI Fangzhou, GUO Feiyun, LI Weibiao 118 Influence of mesoscale eddies on primary production in the South China Sea during spring inter-monsoon period HU Zifeng, TAN Yehui, SONG Xingyu, ZHOU Linbin, LIAN Xiping, HUANG Liangmin, HE Yinghui 129 Wind vector retrieval algorithm from spaceborne lidar data WANG Tianyu, PAN Delu, HE Xianqiang, WANG Difeng
Number 4
Page 1 Petrologic perspectives on tectonic evolution of a nascent basin (Okinawa Trough) behind Ryukyu Arc: A review YAN Quanshu, SHI Xuefa 13 Speciation, distribution, and potential ecological risk assessment of heavy metals in Xiamen Bay surface sediment LIN Cai, LIU Yang, LI Wenquan, SUN Xiuwu, JI Weidong 22 Optical properties of estuarine dissolved organic matter isolated using cross-flow ultrafiltration YI Yueyuan, ZHENG Airong, GUO Weidong, YANG Liyang, CHEN Ding 30 Distributional characteristics of grain sizes of surface sediments in the Zhujiang River Estuary JIANG Siyi, XU Fangjian, LI Yan, LIU Xiling, ZHAO Yongfang, XU Wei 37 Spatial distribution pattern of seafloor hydrothermal vents to the southeastern Kueishan Tao offshore Taiwan Island HAN Chenhua, YE Ying, PAN Yiwen, QIN Huawei, WU Guanghai, CHEN Chen-Tung Arthur 45 Variations of oceanic fronts and their influence on the fishing grounds of Ommastrephes bartramii in the Northwest Pacific CHEN Xinjun, TIAN Siquan, GUAN Wenjian 55 16S rRNA is a better choice than COI for DNA barcoding hydrozoans in the coastal waters of China ZHENG Lianming, HE Jinru, LIN Yuanshao, CAO Wenqing, ZHANG Wenjing 77 Re-identifying Grateloupia yangjiangensis (Rhodophyta, Halymeniaceae) based on morphological observations, life history and rbcL sequence analyses WANG Hongwei, GUO Shaoru, ZHANG Xiaoming, ZHAO Dan, ZHANG Wen, LUAN Rixiao 85 Phosphorus deficiency affects multiple macromolecular biosynthesis pathways of Thalassiosira weissflogii WANG Xiuxiu, HUANG Bangqin, ZHANG Huan 92 Cloning and expression analysis of the chloroplast fructose-1,6-bisphosphatase gene from Pyropia haitanensis XIAO Haidong, CHEN Changsheng, XU Yan, JI Dehua, XIE Chaotian 101 Distribution and sources of heavy metals in the sediment of Xiangshan Bay SUN Weiping, YU Jianjun, XU Xiaoqun, ZHANG Weiyan, LIU Ruijuan, PAN Jianming 108 Are assemblages of the fireworm Hermodice carunculata enhanced in sediments beneath offshore fish cages? Rodrigo Riera, Oscar Pérez, Myriam Rodríguez, Eva Ramos, Óscar Monterroso IV Acta Oceanologica Sinica Vol. 33 (2014) contents
Number 5
Page 1 Diurnal wind and nonlinear interaction between inertial and tidal currents in the South China Sea during the passage of Typhoon Conson LIU Junliang, CAI Shuqun, WANG Shengan 8 Formation and transport of intermediate water masses in a model of the Pacific Ocean LI Yangchun, XU Yongfu 17 The bimodality of the Luzon Strait deep water WU Qingsong, ZHAO Jianru, ZHANG Junbiao, SHI Weiyong, LIU Chunqiu 28 Estimation of vertical diffusion coefficient based on a one-dimensional temperature diffusion equation with an inverse method LIANG Hui, ZHAO Wei, DAI Dejun, ZHANG Jun 37 On the Fourier approximation method for steady water waves ZHAO Hongjun, SONG Zhiyao, LI Ling, KONG Jun 48 Validation of the “HY-2” altimeter wet tropospheric path delay correction based on radiosonde data WANG Jin, ZHANG Jie, FAN Chenqing, WANG Jing 54 Coastal wind field retrieval from polarimetric synthetic aperture radar ZHANG Yi, JIANG Xingwei, SONG Qingtao, LIN Mingsen, XIE Xuetong 62 A new algorithm based on the background field for red tide monitoring in the East China Sea XU Xiaohui, PAN Delu, MAO Zhihua, TAO Bangyi 72 Interannual variability of remotely sensed chlorophyll a during an autumn monsoon transitional period in the Taiwan Strait ZHANG Caiyun, HONG Huasheng 81 A biooptical model of retrieving petroleum concentration in seawater HUANG Miaofen, SONG Qingjun, XING Xufeng, ZHAO Zulong 86 Optical and SAR image registration based on improved non-subsampled wavelet transform for sea islands SHI Wei, SU Fenzhen, WANG Ruirui, LU Yongduo 96 The wave motion over a submerged Jarlan-type perforated breakwater LIU Yong, XIE Luqiong, ZHANG Zhehan 103 An improved method of absolute calibration to satellite altimeter: A case study in the Yellow Sea, China LIU Yalong, TANG Junwu, ZHU Jianhua, LIN Mingsen, ZHAI Wanlin, CHEN Chuntao
Number 6
Page
1 Distributions and air-sea fluxes of CO2 in the summer Bering Sea CHEN Liqi, GAO Zhongyong, SUN Heng, CHEN Baoshan, CAI Wei-jun 9 Differences in nitrous oxide distribution patterns between the Bering Sea basin and Indian Sector of the Southern Ocean CHEN Liqi, ZHANG Jiexia, ZHAN Liyang, LI Yuhong, SUN Heng 20 Distribution of dissolved oxygen and causes of maximum concentration in the Bering Sea in July 2010 SUN Xiuwu, LIN Cai, CHEN Yong, ZHANG Yuanbiao, WANG Jigang, JI Weidong 28 Low 210Pb in the upper thermocline in the Canadian Basin: scavenge process over the Chukchi Sea HU Wangjiang, CHEN Min, YANG Weifeng, ZHANG Run, QIU Yusheng, ZHENG Minfang 40 Variation of freshwater components in the Canada Basin during 1967–2010 PAN Hong, CHEN Min, TONG Jinlu, QIU Yusheng, ZHENG Minfang, CAO Jianping 46 Contrasting patterns of river runoff and sea-ice melted water in the Canada Basin TONG Jinlu, CHEN Min, QIU Yusheng, LI Yanping, CAO Jianping 53 Variation of diffuse attenuation coefficient of downwelling irradiance in the Arctic Ocean WANG Weibo, ZHAO Jinping Acta Oceanologica Sinica Vol. 33 (2014) contents V
63 Composition of fish species in the Bering and Chukchi Seas and their responses to changes in the ecological environment LIN Longshan, CHEN Yongjun, LIAO Yunchih, ZHANG Jing, SONG Puqing, YU Xingguang, WU Risheng, SHAO Kwang-tsao 74 Community structure and spatial distribution of macrobenthos in the shelf area of the Bering Sea WANG Jianjun, HE Xuebao, LIN Heshan, LIN Junhui, HUANG Yaqin, ZHENG Chengxing, ZHENG Fengwu, LI Rongguan, JIANG Jinxiang 82 Biodiversity and community structural characteristics of macrobenthos in the Chukchi Sea WANG Jianjun, LIN Heshan, HE Xuebao, LIN Junhui, HUANG Yaqin, LI Rongguan, ZHENG Chengxing, ZHENG Fengwu, JIANG Jinxiang 90 Abundance and distribution of meiofauna in the Chukchi Sea LIN Rongcheng, HUANG Dingyong, GUO Yuqing, CHANG Yu, CAO Yinkun, WANG Jianjia 95 Hydromedusae from the Arctic in 2010 during the 4th Chinese National Arctic Research Expedition (CHINARE 4) WANG Chunguang, HUANG Jiaqi, XIANG Peng, WANG Yanguo, XU Zhenzu, GUO Donghui, LIN Mao 103 Phytoplankton composition and its ecological effect in subsurface cold pool of the northern Bering Sea in summer as revealed by HPLC derived pigment signatures ZHUANG Yanpei, JIN Haiyan, LI Hongliang, CHEN Jianfang, WANG Bin, CHEN Fajin, BAI Youcheng, LU Yong, TIAN Shichao 112 The distribution of chlorophyll a and its influencing factors in different regions of the Bering Sea KANG Jianhua, CHEN Xingqun, ZHANG Ming
Number 7
Page 1 Responses of the circulation and water mass in the Beibu Gulf to the seasonal forcing regimes GAO Jingsong, SHI Maochong, CHEN Bo, GUO Peifang, ZHAO Dongliang 12 An error evaluation on the vertical velocity algorithm in POM HAN Lei 21 The effect of a seasonal stratification variation on the load exerted by internal solitary waves on a cylindrical pile CAI Shuqun, XU Jiexin, CHEN Zhiwu, XIE Jieshuo, DENG Xiaodong, LV Haibin 27 Numerical studies on the degeneration of internal waves induced by an initial tilted pycnocline LIN Zhenhua, SONG Jinbao 40 The influence of background waves on internal solitary waves after the transit of Typhoon Neast in the northern South China Sea LIN Feilong, HOU Yijun, LIU Ze, HU Po, FANG Yong, DUAN Yongliang 48 A numerical estimation of the impact of Stokes drift on upper ocean temperature ZHANG Xiaoshuang, WANG Zhifeng, WANG Bin, WU Kejian, HAN Guijun, LI Wei 56 A numerical study on seasonal variations of the thermocline in the South China Sea based on the ROMS FAN Wei, SONG Jinbao, LI Shuang 65 A model of sea surface temperature front detection based on a threshold interval PING Bo, SU Fenzhen, MENG Yunshan, FANG Shenghui, DU Yunyan 72 Assimilating the along-track sea level anomaly into the regional ocean modeling system using the ensemble optimal interpolation LYU Guokun, WANG Hui, ZHU Jiang, WANG Dakui, XIE Jiping, LIU Guimei 83 An improved wind speed algorithm for “Jason-1” altimeter under tropical cyclone conditions QIN Bangyong, ZHOU Xuan, ZHANG Honglei, YANG Xiaofeng, LU Rong, YU Yang, SHI Lijian 89 An intelligent coastline interpretation of several types of seacoasts from TM/ETM+ images based on rules WANG Changying, ZHANG Jie, SONG Pingjian 97 On the surface roughness characteristics of the land fast sea-ice in the Bohai Sea LIU Chengyu, CHAO Jinlong, GU Wei, LI Lantao, XU Yingjun VI Acta Oceanologica Sinica Vol. 33 (2014) contents
107 Wave-current bottom shear stresses and sediment re-suspension in the mouth bar of the Modaomen Estuary during the dry season JIA Liangwen, REN Jie, NIE Dan, CHEN Benzhong, LV Xiaoying 116 Tidal flat erosion of the Huanghe River Delta due to local changes in hydrodynamic conditions JIA Yonggang, ZHENG Jiewen, YUE Zhongqi, LIU Xiaolei, SHAN Hongxian 125 Non-conventional modeling of extreme significant wave height through random sets ZHANG Yi, LAM Jasmine Siu Lee
Number 8
Page 1 Dispersal of the Zhujiang River (Pearl River) derived sediment in the Holocene GE Qian, LIU J. P., XUE Zuo, CHU Fengyou 10 Rates of bacterial sulfate reduction and their response to experimental temperature changes in coastal sediments of Qi’ao Island, Zhujiang River Estuary in China WU Zijun, ZHOU Huaiyang, PENG Xiaotong, LI Jiangtao, CHEN Guangqian 18 High resolution oxygen isotope and grayscale records of a medieval fossil giant clam (Tridacna gigas) in the South China Sea: physiological and paleoclimatic implications YAN Hong, WANG Yuhong, SUN Liguang 26 Kr and Xe isotopic compositions of Fe-Mn crusts from the western and central Pacific Ocean and implications for their genesis BU Wenrui, SHI Xuefa, LI Li, ZHANG Mingjie, G. P. Glasby, LIU Jihua 34 A data processing method for MAPR hydrothermal plume turbidity data and its application in the Precious Stone Mountain hydrothermal field CHEN Sheng, TAO Chunhui, LI Huaiming, CHEN Yongshun, ZHOU Jianping, WU Tao 44 Morphological and molecular evidence supports the occurrence of a single species of Zebrias zebrinus along the coastal waters of China WANG Zhongming, KONG Xiaoyu, HUANG Liangmin, WANG Shuying, SHI Wei, KANG Bin 55 Comparative analysis of transcriptomes from albino and control sea cucumbers, Apostichopus japonicus MA Deyou, YANG Hongsheng, SUN Lina, XU Dongxue 62 Ecological indicators showing the succession of macrofauna communities in Sonneratia apetala artificial mangrove wetlands on Qi’ao Island at Zhuhai, South China TANG Yijie, FANG Zhanqiang, ZHANG Zaiwang, ZHONG Yanting, CHEN Kang, LIU Benhan, FAN Junjie, XIONG Tiantian, LU Xiaosheng 73 Seasonal and spatial variation in species diversity, abundance, and element accumulation capacities of macroalgae in mangrove forests of Zhanjiang, China ZHANG Yubin, LI Yuan, SHI Fei, SUN Xingli, LIN Guanghui 83 Autumn living coccolithophores in the Yellow Sea and the East China Sea BAI Jie, GU Xiaoyao, FENG Yuanyuan, JIANG Wensheng, JIN Haiyan, CHEN Jianfang, SUN Jun 95 A numerical model study on multi-species harmful algal blooms coupled with background ecological fields WANG Qing, ZHU Liangsheng, WANG Dongxiao 106 Genetic parameter estimation for juvenile growth and upper thermal tolerance in turbot (Scophthalmus maximus Linnaeus) ZHANG Tianshi, KONG Jie, LIU Baosuo, WANG Qingyin, CAO Baoxiang, LUAN Sheng, WANG Weiji 111 Biological identification and determination of optimum growth conditions for four species of Navicula ZHAO Xiaobo, PANG Shaojun, LIU Feng, SHAN Tifeng, LI Jing Acta Oceanologica Sinica Vol. 33 (2014) contents VII
Number 9
Page 1 Ventilation of the Sulu Sea retrieved from historical data LI Li, GAN Zijun 12 The annual mean sketches and climatological variability of the volume and heat transports through the inter-basin passages: A study based on 1 400-year spin up of MOM4p1 ZHU Yaohua, WEI Zexun, WANG Yonggang, GUAN Yuping, WANG Xinyi 25 Laboratory simulation of the influence of geothermal heating on the interior ocean ZHOU Shengqi, QU Ling, ZHAO Xiaozheng, WAN Wei 32 The impact of surface waves on the mixing of the upper ocean WANG Zhifeng, WU Kejian, XIA Changshui, ZHANG Xiaoshuang 40 Numerical study on water waves and wave-induced longshore currents in Obaköy coastal water TANG Jun, LYU Yigang, SHEN Yongming 47 Nontidal sea level changes in Hiroshima Bay, Japan ZHANG Chuanzheng, KANEKO Arata, ZHU Xiaohua, LIN Ju 56 Biases of the Arctic climate in a regional ocean-sea ice-atmosphere coupled model: an annual validation LIU Xiying 68 Fractal-based weak target detection within sea clutter LI Yang, LV Xiaowen, LIU Kuisheng, ZHAO Shangzhuo 73 Point association analysis of vessel target detection with SAR, HFSWR and AIS JI Yonggang, ZHANG Jie, MENG Junmin, WANG Yiming 82 Research on data pre-deployment in information service flow of digital ocean cloud computing SHI Suixiang, XU Lingyu, DONG Han, WANG Lei, WU Shaochun, QIAO Baiyou, WANG Guoren 93 Remote sensing of phytoplankton distribution in the Red Sea and Gulf of Aden ALKAWRI Abdulsalam, GAMOYO Majambo 100 Reduced inorganic sulfur in the sediments of the Yellow Sea and East China Sea KANG Xuming, LIU Sumei, ZHANG Guoling 109 On the integrity of a commercial cassette ultrafiltration membrane: implications for marine colloidal biogeochemistry LIN Liangshi, CAI Yihua, SUN Xiuwu, CHEN Min 117 Assessing the benthic habitat quality in the Huanghe (Yellow River) Estuary and its adjacent areas using AMBI and M-AMBI LUO Xianxiang, ZHANG Juan, YANG Jianqiang, SONG Wenpeng, CUI Wenlin 125 Weak coupling between heterotrophic nanoflagellates and bacteria in the Yellow Sea Cold Water Mass area LIN Shiquan, HUANG Lingfeng, LU Jiachang 133 The effects of DDT on the feeding, respiration, survival, and reproduction of Sinocalanus tenellus (Copepoda: Calanoida) XU Donghui, LIU Guangxing 139 Phylogeny of genera Laminaria and Saccharina (Laminariales, Phaeophyceae) based on three molecular markers CHI Shan, QIAN Hao, LI Tianyong, WANG Xumin, LIU Cui, REN Lei, TANG Xuexi, LIU Tao 152 Validation of housekeeping genes as internal controls for studying the gene expression in Pyropia haitanensis (Bangiales, Rhodophyta) by quantitative real-time PCR LI Bing, CHEN Changsheng, XU Yan, JI Dehua, XIE Chaotian 160 Colonization dynamics of periphytic diatoms in coastal waters of the Yellow Sea, northern China Liu Yuanyuan, Zhang Wei, Xu Henglong 166 The bacterial abundance and production in the East China Sea: seasonal variations and relationships with the phytoplankton biomass and production CHEN Bingzhang, HUANG Bangqin, XIE Yuyuan, GUO Cui, SONG Shuqun, LI Hongbo, LIU Hongbin 178 The research on direct-drive wave energy conversion system and performance optimization CHEN Zhongxian, YU Haitao, HU Minqiang VIII Acta Oceanologica Sinica Vol. 33 (2014) contents
Number 10
Page 1 Upwelling and anthropogenic forcing on phytoplankton productivity and community structure changes in the Zhejiang coastal area over the last 100 years DUAN Shanshan, XING Lei, ZHANG Hailong, FENG Xuwen, YANG Haili, ZHAO Meixun 10 Paleoenvironmental changes during the late Quaternary as inferred from foraminifera assemblages in the Laizhou Bay YAO Jing, YU Hongjun, XU Xingyong, YI Liang, CHEN Guangquan, SU Qiao 19 Geochemical processes controlling dissolved selenium in the Changjiang (Yangtze) Estuary and its adjacent waters WU Xiaodan, SONG Jinming, WU Bin, LI Tiegang, LI Xuegang 30 Pore capillary pressure and saturation of methane hydrate bearing sediments SUN Shicai, LIU Changling, YE Yuguang, LIU Yufeng 37 Combining ability and heterosis analysis over two environments in a diallel cross of three families of the clam Meretrix meretrix DAI Ping, WANG Hongxia, XIAO Guoqiang, LIU Baozhong 43 Linkages between the biomass of Scomber japonicus and net primary production in the southern East China Sea GUAN Wenjiang, CHEN Xinjun, GAO Feng, LI Gang 49 Population dynamics of Japanese threadfin bream Nemipterus japonicus from Pakistani waters KALHORO Muhsan Ali, LIU Qun, MEMON Khadim Hussain, CHANG Mohammad Saleem, ZHANG Kui 58 Biodiversity and seasonal variation of benthic macrofauna in Minicoy Island, Lakshadweep, India Dalia Susan V, Satheesh Kumar P., Pillai N. G. K 74 Molecular phylogeography and population genetic structure of the planktonic copepod Calanus sinicus Brodsky in the coastal waters of China HUANG Yousong, LIU Guangxing, CHEN Xiaofeng 85 Bacterial diversity in sediments of core MD05-2902 from the Xisha Trough, the South China Sea LI Tao, WANG Peng 94 Microbial community structure and nitrogenase gene diversity of sediment from a deep-sea hydrothermal vent field on the Southwest Indian Ridge WU Yuehong, CAO Yi, WANG Chunsheng, WU Min, AHARON Oren, XU Xuewei 105 Development and utility of EST-SSR markers in Ulva prolifera of the South Yellow Sea ZHANG Lei, WANG Guoliang, LIU Cui, CHI Shan, LIU Tao 114 Studies on the isolation and culture of protoplasts from Kappaphycus alvarezii ZHANG Si, LIU Cui, JIN Yuemei, CHI Shan, TANG Xianming, CHEN Fuxiao, FANG Xu, LIU Tao 124 Seasonal variations of phytoplankton phosphorus stress in the Yellow Sea Cold Water Mass WANG Dan, HUANG Bangqin, LIU Xin, LIU Guimei, WANG Hui
Number 11
Page 1 An estimation of nutrient fluxes to the East China Sea continental shelf from the Taiwan Strait and Kuroshio subsurface waters in summer LI Hongmei, SHI Xiaoyong, WANG Hao, HAN Xiurong 11 A two-time-level split-explicit ocean circulation model (MASNUM) and its validation HAN Lei 36 Mesoscale oceanic eddies in the South China Sea from 1992 to 2012: evolution processes and statistical analysis DU Yunyan, YI Jiawei, WU Di, HE Zhigang, WANG Dongxiao, LIANG Fuyuan 48 A global study of temporal and spatial variation of SWH and wind speed and their correlation HAN Shuzong, ZHANG Huirong, ZHENG Yunxia Acta Oceanologica Sinica Vol. 33 (2014) contents IX
55 Warm water wake off northeast Vietnam in the South China Sea YAN Yunwei, CHEN Changlin, LING Zheng 64 The study on seasonal characteristics of water masses in the western East China Sea shelf area ZHANG Qilong, LIU Hongwei, QIN Sisi, YANG Dezhou, LIU Zhiliang 75 A comparison of the CMIP5 models on the historical simulation of the upper ocean heat content in the South China Sea WANG Gang, LIN Min 85 Impact of the central Pacific zonal wind divergence and convergence on the central Pacific El Niño event ZUO Tao, CHEN Jinnian, WANG Hongna 90 An upper ocean response to Typhoon Bolaven analyzed with Argo profiling floats LIU Zenghong, XU Jianping, SUN Chaohui, WU Xiaofen 102 Near-inertial waves in the wake of 2011 Typhoon Nesat in the northern South China Sea YANG Bing, HOU Yijun 112 The observed analysis on the wave spectra of Hurricane Juan (2003) XU Fumin, BUI THI Thuy Duyen, PERRIE Will 123 Simulation of Typhoon Muifa using a mesoscale coupled atmosphere–ocean model SUN Minghua, DUAN Yihong, ZHU Jianrong, WU Hui, ZHANG Jin, HUANG Wei 134 An Arctic sea ice thickness variability revealed from satellite altimetric measurements BI Haibo, HUANG Haijun, SU Qiao, YAN Liwen, LIU Yanxia, XU Xiuli 141 Mapping sea surface velocities in the Changjiang coastal zone with advanced synthetic aperture radar WANG Lihua, ZHOU Yunxuan, GE Jianzhong, JOHANNESSEN Johnny A., SHEN Fang 150 Component characteristics of polycyclic aromatic compounds in sediments of the South Mid-Atlantic Ridge HUANG Xin, ZENG Zhigang, CHEN Shuai, YIN Xuebo, WANG Xiaoyuan, MA Yao, YANG Baoju, RONG Kunbo, SHU Yunchao, JIANG Tao 155 A continental slope stability evaluation in the Zhujiang River Mouth Basin in the South China Sea LIU Ke, WANG Jianhua
Number 12
Page 1 An evaluation of the simulations of the Arctic Intermediate Water in climate models and reanalyses LI Xiang, SU Jie, ZHAO Jinping 15 Sensitivity of the Arctic sea ice concentration forecasts to different atmospheric forcing: a case study YANG Qinghua, LIU Jiping, ZHANG Zhanhai, SUI Cuijuan, XING Jianyong, LI Ming, LI Chunhua, ZHAO Jiechen, ZHANG Lin 24 An impact assessment of sea ice on ocean optics observations in the marginal ice zone of the Arctic LI Tao, ZHAO Jinping 32 Atmospheric concentration characteristics and gas/particle partitioning of PCBs from the North Pacific to the Arctic Ocean WANG Zhen, NA Guangshui, GAO Hui, WANG Yanjie, YAO Ziwei 40 Carbon and nitrogen isotopic composition of particulate organic matter and its biogeochemical implication in the Bering Sea LIN Feng, CHEN Min, TONG Jinlu, CAO Jianping, QIU Yusheng, ZHENG Minfang 48 Carbon and nitrogen isotopes analysis and sources of organic matter in surface sediments from the Sanggou Bay and its adjacent areas, China XIA Bin, CUI Yi, CHEN Bijuan, CUI Zhengguo, QU Keming, MA Feifei 58 Pourbaix diagrams to decipher precipitation conditions of Si-Fe-Mn-oxyhydroxides at the PACMANUS hydrothermal field YANG Baoju, ZENG Zhigang, WANG Xiaoyuan, YIN Xuebo, CHEN Shuai 67 Biomineralization of organic matter in cobalt-rich crusts from the Marcus–Wake Seamounts of the western Pacific Ocean ZHAO Jun, ZHANG Haisheng, WU Guanghai, LU Bing, PULYAEVA Irina A, ZHANG Haifeng, PANG Xuehui X Acta Oceanologica Sinica Vol. 33 (2014) contents
75 Tephra records from abyssal sediments off western Sumatra in recent 135 ka: evidence from Core IR-GC1 QIU Zhongyan, HAN Xiqiu, JIN Xianglong, WANG Yejian, ZHU Jihao 81 Geochemical characteristics and their significances of rare-earth elements in deep-water well core at the Lingnan Low Uplift Area of the Qiongdongnan Basin SUN Zhipeng, ZHAI Shikui, XIU Chun, LIU Xinyu, ZONG Tong, LUO Wei, LIU Xiaofeng, CHEN Kui, LI Na 96 Vertical migration through faults and hydrocarbon accumulation patterns in deepwater areas of the Qiongdongnan Basin WANG Zhenfeng, LIU Zhen, CAO Shang, SUN Zhipeng, ZUO Qianmei, WANG Yahui, HE Weijun 107 Analyses on the tectonic thermal evolution and influence factors in the deep-water Qiongdongnan Basin WANG Zhenfeng, SHI Xiaobin, YANG Jun, HUANG Baojia, SUN Zhen, WANG Yahui, JIANG Haiyan, YU Chuanhai, YANG Xiaoqiu 118 Characterising the nature, evolution and origin of detachment fault in central depression belt, Qiongdongnan Basin of South China Sea: evidence from seismic reflection data REN Jianye, ZHANG Daojun, TONG Dianjun, HUANG Anmin, WANG Yahui, LEI Chao, ZUO Qianmei, ZHAO Yanghui, HE Weijun,YANG Linlong 127 CFD simulation on the generation of turbidites in deepwater areas: a case study of turbidity current processes in Qiongdongnan Basin, northern South China Sea JIANG Tao, ZHANG Yingzhao, TANG Sulin, ZHANG Daojun, ZUO Qianmei, LIN Weiren,WANG Yahui, SUN Hui, WANG Bo 138 Spatial distribution and reconstruction potential of Japanese anchovy (Engraulis japonicus) based on scale deposition records in recent anaerobic sediment of the Yellow Sea and East China Sea HUANG Jiansheng, SUN Yao, JIA Haibo, YANG Qian, TANG Qisheng 145 Seasonal variations in diversity and abundance of surface ichthyoplankton in the northern South China Sea LI Kaizhi, YIN Jianqiang, HUANG Liangmin, LIN Zhaojin 155 Amphipods fail to suppress the accumulation of Ulva lactuca biomass in eutrophic Yundang Lagoon ZHENG Xinqing, HUANG Lingfeng, WANG Qian, LIN Rongcheng 163 Purification and biochemical characterization of manganese-containing superoxide dismutase from deep-sea thermophile Geobacillus sp. EPT3 ZHU Yanbing, LI Hebin, NI Hui, LIU Jingwen, XIAO Anfeng, CAI Huinong 170 Phytoplankton community characteristics in the coastal waters of the southeastern Arabian Sea MINU P., SHAJU S. S, MUHAMED ASHRAF P., MEENAKUMARI B. 180 Micro-phytoplankton distribution and biomass in and around a channel-based fish farm: implications for sustainable aquaculture SADALLY S. B, NAZURALLY N, TALEB-HOSSENKHAN N, BHAGOOLI R 192 Discrimination of marine algal taxonomic groups based on fluorescence excitation emission matrix, parallel factor analysis and CHEMTAX CHEN Xiaona, SU Rongguo, BAI Ying, SHI Xiaoyong, YANG Rujun 206 Ambient noise spectral properties in the north area of Xisha DA Lianglong, WANG Chao, HAN Mei, ZHANG Lin 212 Probabilistic ecological risk assessment of cadmium in the Bohai Sea using native saltwater species MU Jingli, WANG Juying, WANG Ying, CONG Yi, ZHANG Zhifeng 222 Temporal variations of mesozooplankton abundance and biomass in the mangrove creek area along the Karachi coast, Pakistan Farah Naz, Naureen Aziz Qureshi, Noor Us Saher
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