Malvaceae, Subfamily Malvoideae) As Inferred from Its Sequence Data1
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Molecular Evolutionary Rates Predict Both Extinction and Speciation In
Lancaster BMC Evolutionary Biology 2010, 10:162 http://www.biomedcentral.com/1471-2148/10/162 RESEARCH ARTICLE Open Access MolecularResearch article evolutionary rates predict both extinction and speciation in temperate angiosperm lineages Lesley T Lancaster Abstract Background: A positive relationship between diversification (i.e., speciation) and nucleotide substitution rates is commonly reported for angiosperm clades. However, the underlying cause of this relationship is often unknown because multiple intrinsic and extrinsic factors can affect the relationship, and these have confounded previous attempts infer causation. Determining which factor drives this oft-reported correlation can lend insight into the macroevolutionary process. Results: Using a new database of 13 time-calibrated angiosperm phylogenies based on internal transcribed spacer (ITS) sequences, and controlling for extrinsic variables of life history and habitat, I evaluated several potential intrinsic causes of this correlation. Speciation rates (λ) and relative extinction rates (ε) were positively correlated with mean substitution rates, but were uncorrelated with substitution rate heterogeneity. It is unlikely that the positive diversification-substitution correlation is due to accelerated molecular evolution during speciation (e.g., via enhanced selection or drift), because punctuated increases in ITS rate (i.e., greater mean and variation in ITS rate for rapidly speciating clades) were not observed. Instead, fast molecular evolution likely increases speciation rate (via increased mutational variation as a substrate for selection and reproductive isolation) but also increases extinction (via mutational genetic load). Conclusions: In general, these results predict that clades with higher background substitution rates may undergo successful diversification under new conditions while clades with lower substitution rates may experience decreased extinction during environmental stasis. -
Gossypium Barbadense: an Approach for in Situ Conservation in Cerrado, Brazil
Journal of Agricultural Science; Vol. 8, No. 8; 2016 ISSN 1916-9752 E-ISSN 1916-9760 Published by Canadian Center of Science and Education Gossypium barbadense: An Approach for in Situ Conservation in Cerrado, Brazil Andrezza Arantes Castro1, Lúcia Vieira Hoffmann2, Thiago Henrique Lima1, Aryanny Irene Domingos Oliveira1, Rafaela Ribeiro Brito1, Letícia de Maria Oliveira Mendes1, Caio César Oliveira Pereira1, Guilherme Malafaia1 & Ivandilson Pessoa Pinto de Menezes1 1 Genetic Molecular Laboratory, Instituto Federal Goiano, Urutaí, Goiás, Brazil 2 Embrapa Algodão, Campina Grande, Paraíba, Brazil Correspondence: Ivandilson Pessoa Pinto de Menezes, School Genetic Molecular Laboratory, Instituto Federal Goiano, Urutaí, Brazil. Tel: 55-64-9279-9708. E-mail: [email protected] Received: May 27, 2016 Accepted: June 16, 2016 Online Published: July 15, 2016 doi:10.5539/jas.v8n8p59 URL:http://dx.doi.org/10.5539/jas.v8n8p59 Abstract Abandonment of planting of Gossypium barbadense has endangered its existence. The objective was to determine the characteristicof the maintenance of Gossypium barbadense in the Central-West Region of Brazil, with the aim to foster the conservation of the species. Expeditions were conducted in 2014-2015 in Southeast Goiás, where cotton collection has not been reported before. Data from previous collections in Goiás, Mato Grosso, Mato Grosso do Sul and Distrito Federal available in Albrana database were considered this study. In the Central-West Region of Brazil, 466 accesses of G. barbadense were recorded, found most frequently in backyards (91.4%), but also spontaneous plants (7.5%), farm boundary (0.8%) and commercial farming (0.2%) have also been found. The main use indicated by VDU was as medicinal plant (0.66), therefore this is the main reason for in situ preservation. -
Outline of Angiosperm Phylogeny
Outline of angiosperm phylogeny: orders, families, and representative genera with emphasis on Oregon native plants Priscilla Spears December 2013 The following listing gives an introduction to the phylogenetic classification of the flowering plants that has emerged in recent decades, and which is based on nucleic acid sequences as well as morphological and developmental data. This listing emphasizes temperate families of the Northern Hemisphere and is meant as an overview with examples of Oregon native plants. It includes many exotic genera that are grown in Oregon as ornamentals plus other plants of interest worldwide. The genera that are Oregon natives are printed in a blue font. Genera that are exotics are shown in black, however genera in blue may also contain non-native species. Names separated by a slash are alternatives or else the nomenclature is in flux. When several genera have the same common name, the names are separated by commas. The order of the family names is from the linear listing of families in the APG III report. For further information, see the references on the last page. Basal Angiosperms (ANITA grade) Amborellales Amborellaceae, sole family, the earliest branch of flowering plants, a shrub native to New Caledonia – Amborella Nymphaeales Hydatellaceae – aquatics from Australasia, previously classified as a grass Cabombaceae (water shield – Brasenia, fanwort – Cabomba) Nymphaeaceae (water lilies – Nymphaea; pond lilies – Nuphar) Austrobaileyales Schisandraceae (wild sarsaparilla, star vine – Schisandra; Japanese -
Characterization of Some Common Members of the Family Malvaceae S.S
Indian Journal of Plant Sciences ISSN: 2319–3824(Online) An Open Access, Online International Journal Available at http://www.cibtech.org/jps.htm 2014 Vol. 3 (3) July-September, pp.79-86/Naskar and Mandal Research Article CHARACTERIZATION OF SOME COMMON MEMBERS OF THE FAMILY MALVACEAE S.S. ON THE BASIS OF MORPHOLOGY OF SELECTIVE ATTRIBUTES: EPICALYX, STAMINAL TUBE, STIGMATIC HEAD AND TRICHOME *Saikat Naskar and Rabindranath Mandal Department of Botany, Barasat Govt. College, Barasat, Kolkata- 700124, West Bengal, India *Author for Correspondence: [email protected] ABSTRACT Epicalyx, staminal tube, stigma and trichome morphological characters have been used to characterize some common members of Malvaceae s.s. These characters have been analyzed following a recent molecular phylogenetic classification of Malvaceae s.s. Stigmatic character is effective for segregation of the tribe Gossypieae from other tribes. But precise distinction of other two studied tribes, viz. Hibisceae and Malveae on the basis of this character proved to be insufficient. Absence of epicalyx in Malachra has indicated an independent evolutionary event within Hibisceae. Distinct H-shaped trichome of Malvastrum has pointed out its isolated position within Malveae. Staminal tube morphological similarities of Abutilon and Sida have suggested their closeness. A key to the genera has been provided for identification purpose. Keywords: Malvaceae s.s., Epicalyx, Staminal Tube, Stigma, Trichome INTRODUCTION Epicalyx and monadelphous stamens are considered as key characters of the family Malvaceae s.s. Epicalyx was recognized as an important character for taxonomic value by several authors (Fryxell, 1988; Esteves, 2000) since its presence or absence was employed to determine phylogenetic interpretation within the tribes of Malvaceae s.s. -
<I>Plagianthus</I> (Malveae, Malvaceae)
Systematic Botany (2011), 36(2): pp. 405–418 © Copyright 2011 by the American Society of Plant Taxonomists DOI 10.1600/036364411X569589 Phylogeny and Character Evolution in the New Zealand Endemic Genus Plagianthus (Malveae, Malvaceae) Steven J. Wagstaff 1 , 3 and Jennifer A. Tate 2 1 Allan Herbarium, Landcare Research, PO Box 40, Lincoln 7640, New Zealand 2 Massey University, Institute of Molecular Biosciences, Private Bag 11222, Palmerston North, New Zealand 3 Author for correspondence ([email protected]) Communicating Editor: Lúcia Lohmann Abstract— As presently circumscribed, Plagianthus includes two morphologically distinct species that are endemic to New Zealand. Plagianthus divaricatus , a divaricate shrub, is a dominant species in coastal saline shrub communities, whereas P. regius is a tree of lowland and montane forests. Results from independent analyses of ITS and 5′ trnK / matK sequences are congruent, and when combined provide a robust framework to study character evolution. Our findings suggest the ancestor of Plagianthus originated in Australia where the sister gen- era Asterotrichion and Gynatrix are presently distributed. The stem age of Plagianthus was estimated at 7.3 (4.0–14.0) million years ago (Ma) and the crown radiation at 3.9 (1.9–8.2) Ma. Most of the characters optimized onto the molecular phylogeny were shared with source lineages from Australia and shown to be plesiomorphic. Only the divaricate branching pattern characteristic of Plagianthus divaricatus was acquired after the lineage became established in New Zealand and shown to be apomorphic. The initial Plagianthus founders were shrubs or small trees with deciduous leaves and small inconspicuous dioecious flowers. -
GOOSEBERRYLEAF GLOBEMALLOW Sphaeralcea Grossulariifolia (Hook
GOOSEBERRYLEAF GLOBEMALLOW Sphaeralcea grossulariifolia (Hook. & Arn.) Rydb. Malvaceae – Mallow family Corey L. Gucker & Nancy L. Shaw | 2018 ORGANIZATION NOMENCLATURE Sphaeralcea grossulariifolia (Hook. & Arn.) Names, subtaxa, chromosome number(s), hybridization. Rydb., hereafter referred to as gooseberryleaf globemallow, belongs to the Malveae tribe of the Malvaceae or mallow family (Kearney 1935; La Duke 2016). Range, habitat, plant associations, elevation, soils. NRCS Plant Code. SPGR2 (USDA NRCS 2017). Subtaxa. The Flora of North America (La Duke 2016) does not recognize any varieties or Life form, morphology, distinguishing characteristics, reproduction. subspecies. Synonyms. Malvastrum coccineum (Nuttall) A. Gray var. grossulariifolium (Hooker & Arnott) Growth rate, successional status, disturbance ecology, importance to animals/people. Torrey, M. grossulariifolium (Hooker & Arnott) A. Gray, Sida grossulariifolia Hooker & Arnott, Sphaeralcea grossulariifolia subsp. pedata Current or potential uses in restoration. (Torrey ex A. Gray) Kearney, S. grossulariifolia var. pedata (Torrey ex A. Gray) Kearney, S. pedata Torrey ex A. Gray (La Duke 2016). Seed sourcing, wildland seed collection, seed cleaning, storage, Common Names. Gooseberryleaf globemallow, testing and marketing standards. current-leaf globemallow (La Duke 2016). Chromosome Number. Chromosome number is stable, 2n = 20, and plants are diploid (La Duke Recommendations/guidelines for producing seed. 2016). Hybridization. Hybridization occurs within the Sphaeralcea genus. -
Bio 308-Course Guide
COURSE GUIDE BIO 308 BIOGEOGRAPHY Course Team Dr. Kelechi L. Njoku (Course Developer/Writer) Professor A. Adebanjo (Programme Leader)- NOUN Abiodun E. Adams (Course Coordinator)-NOUN NATIONAL OPEN UNIVERSITY OF NIGERIA BIO 308 COURSE GUIDE National Open University of Nigeria Headquarters 14/16 Ahmadu Bello Way Victoria Island Lagos Abuja Office No. 5 Dar es Salaam Street Off Aminu Kano Crescent Wuse II, Abuja e-mail: [email protected] URL: www.nou.edu.ng Published by National Open University of Nigeria Printed 2013 ISBN: 978-058-434-X All Rights Reserved Printed by: ii BIO 308 COURSE GUIDE CONTENTS PAGE Introduction ……………………………………......................... iv What you will Learn from this Course …………………............ iv Course Aims ……………………………………………............ iv Course Objectives …………………………………………....... iv Working through this Course …………………………….......... v Course Materials ………………………………………….......... v Study Units ………………………………………………......... v Textbooks and References ………………………………........... vi Assessment ……………………………………………….......... vi End of Course Examination and Grading..................................... vi Course Marking Scheme................................................................ vii Presentation Schedule.................................................................... vii Tutor-Marked Assignment ……………………………….......... vii Tutors and Tutorials....................................................................... viii iii BIO 308 COURSE GUIDE INTRODUCTION BIO 308: Biogeography is a one-semester, 2 credit- hour course in Biology. It is a 300 level, second semester undergraduate course offered to students admitted in the School of Science and Technology, School of Education who are offering Biology or related programmes. The course guide tells you briefly what the course is all about, what course materials you will be using and how you can work your way through these materials. It gives you some guidance on your Tutor- Marked Assignments. There are Self-Assessment Exercises within the body of a unit and/or at the end of each unit. -
Checklist of the Vascular Alien Flora of Catalonia (Northeastern Iberian Peninsula, Spain) Pere Aymerich1 & Llorenç Sáez2,3
BOTANICAL CHECKLISTS Mediterranean Botany ISSNe 2603-9109 https://dx.doi.org/10.5209/mbot.63608 Checklist of the vascular alien flora of Catalonia (northeastern Iberian Peninsula, Spain) Pere Aymerich1 & Llorenç Sáez2,3 Received: 7 March 2019 / Accepted: 28 June 2019 / Published online: 7 November 2019 Abstract. This is an inventory of the vascular alien flora of Catalonia (northeastern Iberian Peninsula, Spain) updated to 2018, representing 1068 alien taxa in total. 554 (52.0%) out of them are casual and 514 (48.0%) are established. 87 taxa (8.1% of the total number and 16.8 % of those established) show an invasive behaviour. The geographic zone with more alien plants is the most anthropogenic maritime area. However, the differences among regions decrease when the degree of naturalization of taxa increases and the number of invaders is very similar in all sectors. Only 26.2% of the taxa are more or less abundant, while the rest are rare or they have vanished. The alien flora is represented by 115 families, 87 out of them include naturalised species. The most diverse genera are Opuntia (20 taxa), Amaranthus (18 taxa) and Solanum (15 taxa). Most of the alien plants have been introduced since the beginning of the twentieth century (70.7%), with a strong increase since 1970 (50.3% of the total number). Almost two thirds of alien taxa have their origin in Euro-Mediterranean area and America, while 24.6% come from other geographical areas. The taxa originated in cultivation represent 9.5%, whereas spontaneous hybrids only 1.2%. From the temporal point of view, the rate of Euro-Mediterranean taxa shows a progressive reduction parallel to an increase of those of other origins, which have reached 73.2% of introductions during the last 50 years. -
Evolutionary Consequences of Dioecy in Angiosperms: the Effects of Breeding System on Speciation and Extinction Rates
EVOLUTIONARY CONSEQUENCES OF DIOECY IN ANGIOSPERMS: THE EFFECTS OF BREEDING SYSTEM ON SPECIATION AND EXTINCTION RATES by JANA C. HEILBUTH B.Sc, Simon Fraser University, 1996 A THESIS SUBMITTED IN PARTIAL FULFILLMENT OF THE REQUIREMENTS FOR THE DEGREE OF DOCTOR OF PHILOSOPHY in THE FACULTY OF GRADUATE STUDIES (Department of Zoology) We accept this thesis as conforming to the required standard THE UNIVERSITY OF BRITISH COLUMBIA July 2001 © Jana Heilbuth, 2001 Wednesday, April 25, 2001 UBC Special Collections - Thesis Authorisation Form Page: 1 In presenting this thesis in partial fulfilment of the requirements for an advanced degree at the University of British Columbia, I agree that the Library shall make it freely available for reference and study. I further agree that permission for extensive copying of this thesis for scholarly purposes may be granted by the head of my department or by his or her representatives. It is understood that copying or publication of this thesis for financial gain shall not be allowed without my written permission. The University of British Columbia Vancouver, Canada http://www.library.ubc.ca/spcoll/thesauth.html ABSTRACT Dioecy, the breeding system with male and female function on separate individuals, may affect the ability of a lineage to avoid extinction or speciate. Dioecy is a rare breeding system among the angiosperms (approximately 6% of all flowering plants) while hermaphroditism (having male and female function present within each flower) is predominant. Dioecious angiosperms may be rare because the transitions to dioecy have been recent or because dioecious angiosperms experience decreased diversification rates (speciation minus extinction) compared to plants with other breeding systems. -
SAN DIEGO COUNTY NATIVE PLANTS in the 1830S
SAN DIEGO COUNTY NATIVE PLANTS IN THE 1830s The Collections of Thomas Coulter, Thomas Nuttall, and H.M.S. Sulphur with George Barclay and Richard Hinds James Lightner San Diego Flora San Diego, California 2013 SAN DIEGO COUNTY NATIVE PLANTS IN THE 1830s Preface The Collections of Thomas Coulter, Thomas Nuttall, and Our knowledge of the natural environment of the San Diego region H.M.S. Sulphur with George Barclay and Richard Hinds in the first half of the 19th century is understandably vague. Referenc- es in historical sources are limited and anecdotal. As prosperity peaked Copyright © 2013 James Lightner around 1830, probably no more than 200 inhabitants in the region could read and write. At most one or two were trained in natural sciences or All rights reserved medicine. The best insights we have into the landscape come from nar- No part of this document may be reproduced or transmitted in any form ratives of travelers and the periodic reports of the missions’ lands. They without permission in writing from the publisher. provide some idea of the extent of agriculture and the general vegeta- tion covering surrounding land. ISBN: 978-0-9749981-4-5 The stories of the visits of United Kingdom naturalists who came in Library of Congress Control Number: 2013907489 the 1830s illuminate the subject. They were educated men who came to the territory intentionally to examine the flora. They took notes and col- Cover photograph: lected specimens as botanists do today. Reviewing their contributions Matilija Poppy (Romneya trichocalyx), Barrett Lake, San Diego County now, we can imagine what they saw as they discovered plants we know. -
Malacothamnus Fasciculatus 'Casitas' Chaparral Mallow Malvaceae
Malacothamnus palmeri 'Jolon' Santa Lucia Bush Mallow Malvaceae Exposure Full sun Water No summer water Form Evergreen shrub Height 5 feet Flower color White Bloom time Spring This Bush Mallow forms spreading clumps with flowers resembling small hollyhocks borne in dense terminal clusters. Give good drainage and room to spread. Habitat Foothills Malacothamnus fasciculatus 'Casitas' Chaparral mallow Malvaceae Exposure Full sun Water Occasional water Form Evergreen shrub Height 8 feet Flower color Pink Bloom time Summer This attractive selection has showy pink flowers and silvery leaves like maple leaves. Its tall unbranched stems form a fountain shape. Easily grown with good drainage, it will spread by runners forming extensive thickets eventually. Cut back after bloom to encourage dense new growth. Habitat Coastal scrub Malacothamnus fasciculatus Chaparral Mallow Malvaceae Exposure Full sun Water No summer water Form Deciduous shrub Height 6 feet Flower color Pink Bloom time Summer Chaparral mallow forms a fountain-shaped shrub with hairy gray leaves. The flowers in shades of pink, resembling small hollyhocks, appear in spikes or panicles during the summer. This is a good plant for a dry garden or bank cover. Cut back after bloom for best appearance. Rhizomes may spread to form thickets. Give good drainage. Habitat Coastal scrub, chaparral Warning Wear protection from hairs when pruning Malacothamnus palmeri 'Hanging Valley' Arroyo Seco Bush Mallow Malvaceae Exposure Full sun Water No summer water Form Evergreen shrub Height 5 feet Flower color Pink Bloom time Late spring This Bush Mallow forms spreading clumps with deep pink flowers resembling small hollyhocks borne in dense terminal clusters. -
Tropical Forests
1740 TROPICAL FORESTS / Bombacaceae in turn cause wild swings in the ecology and these Birks JS and Barnes RD (1990) Provenance Variation in swings themselves can sometimes prove to be beyond Pinus caribaea, P. oocarpa and P. patula ssp. tecunuma- control through management. In the exotic environ- nii. Tropical Forestry Papers no. 21. Oxford, UK: Oxford ments, it is impossible to predict or even conceive of Forestry Institute. the events that may occur and to know their Critchfield WB and Little EL (1966) Geographic Distribu- consequences. Introduction of diversity in the forest tion of the Pines of the World. Washington, DC: USDA Miscellaneous Publications. through mixed ages, mixed species, rotation of Duffield JW (1952) Relationships and species hybridization species, silvicultural treatment, and genetic variation in the genus Pinus. Zeitschrift fu¨r Forstgenetik und may make ecology and management more complex Forstpflanzenzuchtung 1: 93–100. but it will render the crop ecosystem much more Farjon A and Styles BT (1997) Pinus (Pinaceae). Flora stable, robust, and self-perpetuating and provide Neotropica Monograph no. 75. New York: New York buffers against disasters. The forester must treat crop Botanical Garden. protection as part of silvicultural planning. Ivory MH (1980) Ectomycorrhizal fungi of lowland tropical pines in natural forests and exotic plantations. See also: Pathology: Diseases affecting Exotic Planta- In: Mikola P (ed.) Tropical Mycorrhiza Research, tion Species; Diseases of Forest Trees. Temperate and pp. 110–117. Oxford, UK: Oxford University Press. Mediterranean Forests: Northern Coniferous Forests; Ivory MH (1987) Diseases and Disorders of Pines in the Southern Coniferous Forests. Temperate Ecosystems: Tropics. Overseas Research Publication no.