The Role of Ceramide and Sphingosine-1-Phosphate in Alzheimer's

Total Page:16

File Type:pdf, Size:1020Kb

The Role of Ceramide and Sphingosine-1-Phosphate in Alzheimer's Molecular Neurobiology (2019) 56:5436–5455 https://doi.org/10.1007/s12035-018-1448-3 The Role of Ceramide and Sphingosine-1-Phosphate in Alzheimer’s Disease and Other Neurodegenerative Disorders Kinga Czubowicz1 & Henryk Jęśko2 & Przemysław Wencel1 & Walter J. Lukiw3 & Robert P. Strosznajder1 Received: 2 August 2018 /Accepted: 6 December 2018 /Published online: 5 January 2019 # The Author(s) 2019 Abstract Bioactive sphingolipids—ceramide, sphingosine, and their respective 1-phosphates (C1P and S1P)—are signaling molecules serving as intracellular second messengers. Moreover, S1P acts through G protein-coupled receptors in the plasma membrane. Accumulating evidence points to sphingolipids' engagement in brain aging and in neurodegenerative disorders such as Alzheimer’s, Parkinson’s, and Huntington’s diseases and amyotrophic lateral sclerosis. Metabolic alterations observed in the course of neurodegeneration favor ceramide-dependent pro-apoptotic signaling, while the levels of the neuroprotective S1P are reduced. These trends are observed early in the diseases’ development, suggesting causal relationship. Mechanistic evidence has shown links between altered ceramide/S1P rheostat and the production, secretion, and aggregation of amyloid β/α-synuclein as well as signaling pathways of critical importance for the pathomechanism of protein conformation diseases. Sphingolipids influence multiple aspects of Akt/protein kinase B signaling, a pathway that regulates metabolism, stress response, and Bcl-2 family proteins. The cross-talk between sphingolipids and transcription factors including NF-κB, FOXOs, and AP-1 may be also important for immune regulation and cell survival/death. Sphingolipids regulate exosomes and other secretion mechanisms that can contribute to either the spread of neurotoxic proteins between brain cells, or their clearance. Recent discoveries also suggest the importance of intracellular and exosomal pools of small regulatory RNAs in the creation of disturbed signaling environment in the diseased brain. The identified interactions of bioactive sphingolipids urge for their evaluation as potential therapeutic targets. Moreover, the early disturbances in sphingolipid metabolism may deliver easily accessible biomarkers of neurodegen- erative disorders. Keywords Alzheimer’sdisease . Ceramide . Huntington’sdisease . microRNA . Parkinson’sdisease . Sphingosine-1-phosphate Introduction the development of devastating disorders. Two of the most widespread neurodegenerative diseases are Alzheimer’s(AD) Aging, which itself influences the central nervous system (CNS) and Parkinson’s (PD). Dementia affects estimated 47 million in a relatively subtle manner, creates vulnerable background for people worldwide [1], placing enormous burden on the affected individuals, their families, societies, and healthcare systems. AD is the most common neurodegenerative disorder, responsible for Kinga Czubowicz and Henryk Jęśko contributed equally to this work. up to 70% of dementia cases [1]. This disease is characterized by the presence of aggregates of pathologically misfolded proteins, * Robert P. Strosznajder including the extracellular senile plaques built mainly of amy- [email protected] loid β (Aβ), a product of proteolytic cleavage of the transmem- β β β γ 1 Laboratory of Preclinical Research and Environmental Agents, brane A precursor protein (A PP) by -and -secretase [2]. Department of Neurosurgery, M. Mossakowski Medical Research Neurons in AD also display cytoskeletal abnormalities that are Centre, Polish Academy of Sciences, 5 Pawinskiego St., linked to hyperphosphorylation and aggregation of the PL-02106 Warsaw, Poland microtubule-associated tau protein into intracellular neurofibril- 2 Department of Cellular Signalling, Mossakowski Medical Research lary tangles [3]. Centre, Polish Academy of Sciences, 5 Pawinskiego St., Parkinson’s disease is the most frequently occurring move- PL-02106 Warsaw, Poland ment disease and the second most widespread neurodegener- 3 LSU Neuroscience Center and Departments of Neurology and ative disorder after AD [4]. It is estimated that PD affects up to Ophthalmology, Louisiana State University School of Medicine, New Orleans, LA 70112, USA 1% of people over the age of 60 and up to ca. 4% over 85 [5]. Mol Neurobiol (2019) 56:5436–5455 5437 PD is characterized by subcortical neurodegeneration, includ- pathway. Sphingosine kinases (SPHK1, SPHK2) phosphorylate ing the characteristic loss of dopaminergic phenotype neurons sphingosine into S1P in a highly regulated fashion in various in substantia nigra pars compacta, loss of dopaminergic stria- cellular compartments; dephosphorylation is carried out by S1P tum innervation, and histopathological aberrations in the form phosphatases (SGPP1 and SGPP2), while S1P can be also hy- of α-synuclein (ASN)-containing intracellular Lewy bodies drolyzed irreversibly into ethanolamine phosphate and (LB)/Lewy neurites (LN) [4]. Disturbances in other neuro- hexadecenal by S1P lyase (SGPL) [9]. Activity of the enzyme transmitter systems (serotoninergic, noradrenergic, and cho- glucocerebrosidase (GBA) can be another ceramide source [30] linergic) are increasingly being recognized along non-motor with significant links to Parkinson’sdisease(seePt.'Theroleof symptoms, which—in later stages—may include dementia bioactive sphingolipids in Parkinson’s disease'). [6]. Like AD, Parkinsonian neurodegeneration progresses in a stealthy manner, and when clear symptoms appear the do- S1P and Ceramide in Neuronal Survival and Death paminergic neuron population is already decimated [4]. Signaling Bioactive Sphingolipids Biosynthesis Bioactive sphingolipids employ several mechanisms to exert their influence on intra- and extracellular signaling pathways. Once merely considered structural compounds, bioactive Plasma membrane is one of main cellular regions of SPHK sphingolipids are increasingly implicated as signaling mole- activation; S1P and probably C1P can bind cell surface receptors cules in the brain, and play important roles in aging, neurode- [31, 32]. S1P receptors (S1PR1 to S1PR5) belong to the Edg generative disorders, and the accompanying immune deregula- family and bind G ,G,G , and Rho proteins [31]. While tion [7]. Ceramide, ceramide-1-phosphate (C1P), sphingosine, q i 12/13 data on the postulated C1P receptor is scarce, all S1PR1 to -5 and sphingosine-1-phosphate (S1P) are the best described bio- bind G ,S1PR2and-3bindG and all but S1PR1 signal through active sphingolipids regulating stress resistance, proliferation, i q G (Fig. 1). Through either S1PR-binding G proteins or differentiation, and mature phenotypes of nervous system cells 12/13 through more direct interactions with intracellular enzymes, [8, 9]. Sphingolipids have multiple ancillary roles in the regu- sphingolipids also modulate signaling events such as cAMP lation of cell growth, death, senescence, adhesion, migration, (cyclic adenosine monophosphate), MAPK (mitogen-activated inflammation, angiogenesis, and intracellular trafficking in the protein kinase), PKC (protein kinase C), PLD (phospholipase CNS [10, 11]. The sphingolipid rheostat model ascribed these D), and PI3 kinase–Akt–PKB (protein kinase B) [35, 36]. The compounds clearly opposite roles in cellular survival signaling: PI3K–Akt pathway is a crucial integrator of metabolic and stress ceramide as a cell death activator, while C1P and S1P promoted signals engaged in a plethora of physiological and pathological survival. The fact that single phosphorylation reaction turns processes ranging from energy metabolism through aging to ceramide and sphingosine into their antagonistic counterparts age-related diseases [8]. Sphingolipids are also structural com- stresses the significance of the precise, successful control of ponents of lipid bilayers. Changes in their local concentrations sphingolipid metabolism enzymes [8, 12]. Although the pro- modify membrane properties further modulating signaling versus anti-survival roles have blurred somewhat in recent years events that take part in these membranes. [13], the critical roles of sphingolipid signaling in nervous sys- tem function have been confirmed by effects of mutations in CerK C1P C1PR? C1PP their biosynthesis and receptor genes [14–24]. The importance Cer PKC, CerS Ceramidase 2+ of bioactive sphingolipids is also stressed by the accumulating S1PR2, S1PR3 Gq PLC, Ca cNOS Sph evidence about their involvement in aging and neurodegenera- SphK FOXOs, SGPP PI3K, Akt – GSK-3β, tive disorders [8, 25 29]. S1P S1PR1-S1PR5 Gi Therateofceramidebiosynthesis is controlled by the first step ERK Bax, Bad of the pathway’s de novo branch, which is catalyzed by serine S1PR2-S1PR5 G12/13 Rho NF-κB palmitoyltransferase (SPT). SPT product dihydrosphingosine is then metabolized by ceramide synthase (CERS) to Fig. 1 Signaling pathways triggered by the cell surface receptors for dihydroceramide, which is subsequently converted by S1P (S1PRs) and C1P (C1PR). S1P through its G protein-binding dihydroceramide desaturase (DES or DEGS) to ceramide. receptors modulates pathways known for their engagement in the Ceramide may be metabolized into sphingomyelin by regulation of cellular metabolism oxidative/nitrosative stress and death/ survival. The depicted examples of S1PR-activated signaling pathways sphingomyelin synthase (SMS, or SGMS); the reverse reaction are far from exhausting the spectrum of observed interactions (e.g., (the sphingomyelinase pathway) catalyzed by S1PR2 inhibits Akt while S1PR3 activates it;
Recommended publications
  • Environmental Influences on Endothelial Gene Expression
    ENDOTHELIAL CELL GENE EXPRESSION John Matthew Jeff Herbert Supervisors: Prof. Roy Bicknell and Dr. Victoria Heath PhD thesis University of Birmingham August 2012 University of Birmingham Research Archive e-theses repository This unpublished thesis/dissertation is copyright of the author and/or third parties. The intellectual property rights of the author or third parties in respect of this work are as defined by The Copyright Designs and Patents Act 1988 or as modified by any successor legislation. Any use made of information contained in this thesis/dissertation must be in accordance with that legislation and must be properly acknowledged. Further distribution or reproduction in any format is prohibited without the permission of the copyright holder. ABSTRACT Tumour angiogenesis is a vital process in the pathology of tumour development and metastasis. Targeting markers of tumour endothelium provide a means of targeted destruction of a tumours oxygen and nutrient supply via destruction of tumour vasculature, which in turn ultimately leads to beneficial consequences to patients. Although current anti -angiogenic and vascular targeting strategies help patients, more potently in combination with chemo therapy, there is still a need for more tumour endothelial marker discoveries as current treatments have cardiovascular and other side effects. For the first time, the analyses of in-vivo biotinylation of an embryonic system is performed to obtain putative vascular targets. Also for the first time, deep sequencing is applied to freshly isolated tumour and normal endothelial cells from lung, colon and bladder tissues for the identification of pan-vascular-targets. Integration of the proteomic, deep sequencing, public cDNA libraries and microarrays, delivers 5,892 putative vascular targets to the science community.
    [Show full text]
  • Supplementary Table S4. FGA Co-Expressed Gene List in LUAD
    Supplementary Table S4. FGA co-expressed gene list in LUAD tumors Symbol R Locus Description FGG 0.919 4q28 fibrinogen gamma chain FGL1 0.635 8p22 fibrinogen-like 1 SLC7A2 0.536 8p22 solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 DUSP4 0.521 8p12-p11 dual specificity phosphatase 4 HAL 0.51 12q22-q24.1histidine ammonia-lyase PDE4D 0.499 5q12 phosphodiesterase 4D, cAMP-specific FURIN 0.497 15q26.1 furin (paired basic amino acid cleaving enzyme) CPS1 0.49 2q35 carbamoyl-phosphate synthase 1, mitochondrial TESC 0.478 12q24.22 tescalcin INHA 0.465 2q35 inhibin, alpha S100P 0.461 4p16 S100 calcium binding protein P VPS37A 0.447 8p22 vacuolar protein sorting 37 homolog A (S. cerevisiae) SLC16A14 0.447 2q36.3 solute carrier family 16, member 14 PPARGC1A 0.443 4p15.1 peroxisome proliferator-activated receptor gamma, coactivator 1 alpha SIK1 0.435 21q22.3 salt-inducible kinase 1 IRS2 0.434 13q34 insulin receptor substrate 2 RND1 0.433 12q12 Rho family GTPase 1 HGD 0.433 3q13.33 homogentisate 1,2-dioxygenase PTP4A1 0.432 6q12 protein tyrosine phosphatase type IVA, member 1 C8orf4 0.428 8p11.2 chromosome 8 open reading frame 4 DDC 0.427 7p12.2 dopa decarboxylase (aromatic L-amino acid decarboxylase) TACC2 0.427 10q26 transforming, acidic coiled-coil containing protein 2 MUC13 0.422 3q21.2 mucin 13, cell surface associated C5 0.412 9q33-q34 complement component 5 NR4A2 0.412 2q22-q23 nuclear receptor subfamily 4, group A, member 2 EYS 0.411 6q12 eyes shut homolog (Drosophila) GPX2 0.406 14q24.1 glutathione peroxidase
    [Show full text]
  • Identification of Potential Key Genes and Pathway Linked with Sporadic Creutzfeldt-Jakob Disease Based on Integrated Bioinformatics Analyses
    medRxiv preprint doi: https://doi.org/10.1101/2020.12.21.20248688; this version posted December 24, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted medRxiv a license to display the preprint in perpetuity. All rights reserved. No reuse allowed without permission. Identification of potential key genes and pathway linked with sporadic Creutzfeldt-Jakob disease based on integrated bioinformatics analyses Basavaraj Vastrad1, Chanabasayya Vastrad*2 , Iranna Kotturshetti 1. Department of Biochemistry, Basaveshwar College of Pharmacy, Gadag, Karnataka 582103, India. 2. Biostatistics and Bioinformatics, Chanabasava Nilaya, Bharthinagar, Dharwad 580001, Karanataka, India. 3. Department of Ayurveda, Rajiv Gandhi Education Society`s Ayurvedic Medical College, Ron, Karnataka 562209, India. * Chanabasayya Vastrad [email protected] Ph: +919480073398 Chanabasava Nilaya, Bharthinagar, Dharwad 580001 , Karanataka, India NOTE: This preprint reports new research that has not been certified by peer review and should not be used to guide clinical practice. medRxiv preprint doi: https://doi.org/10.1101/2020.12.21.20248688; this version posted December 24, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted medRxiv a license to display the preprint in perpetuity. All rights reserved. No reuse allowed without permission. Abstract Sporadic Creutzfeldt-Jakob disease (sCJD) is neurodegenerative disease also called prion disease linked with poor prognosis. The aim of the current study was to illuminate the underlying molecular mechanisms of sCJD. The mRNA microarray dataset GSE124571 was downloaded from the Gene Expression Omnibus database. Differentially expressed genes (DEGs) were screened.
    [Show full text]
  • Investigation of Adiposity Phenotypes in AA Associated with GALNT10 & Related Pathway Genes
    Investigation of Adiposity Phenotypes in AA Associated With GALNT10 & Related Pathway Genes By Mary E. Stromberg A Dissertation Submitted to the Graduate Faculty of WAKE FOREST UNIVERSITY GRADUATE SCHOOL OF ARTS AND SCIENCES in Partial Fulfillment of the Requirements for the Degree of DOCTOR OF PHILOSOPHY In Molecular Genetics and Genomics December 2018 Winston-Salem, North Carolina Approved by: Donald W. Bowden, Ph.D., Advisor Maggie C.Y. Ng, Ph.D., Advisor Timothy D. Howard, Ph.D., Chair Swapan Das, Ph.D. John P. Parks, Ph.D. Acknowledgements I would first like to thank my mentors, Dr. Bowden and Dr. Ng, for guiding my learning and growth during my years at Wake Forest University School of Medicine. Thank you Dr. Ng for spending so much time ensuring that I learn every detail of every protocol, and supporting me through personal difficulties over the years. Thank you Dr. Bowden for your guidance in making me a better scientist and person. I would like to thank my committee for their patience and the countless meetings we have had in discussing this project. I would like to say thank you to the members of our lab as well as the Parks lab for their support and friendship as well as their contributions to my project. Special thanks to Dean Godwin for his support and understanding. The umbrella program here at WFU has given me the chance to meet some of the best friends I could have wished for. I would like to also thank those who have taught me along the way and helped me to get to this point of my life, with special thanks to the late Dr.
    [Show full text]
  • Effects of Ceramide Synthase 2 Deletion on the Infectivity of HIV-1
    Effects of ceramide synthase 2 deletion on the infectivity of HIV-1 Eric Barklis1*, Ayna Alfadhli1, Jennifer E. Kyle2, Lisa M. Bramer3, Kent J. Bloodsworth2, Robin Lid Barklis1, Hans C. Leier1, R. Max Petty1, Iris D. Zelnik4, Thomas O. Metz2, Anthony H. Futerman4, Fikadu G. Tafesse1* 1Department of Molecular Microbiology and Immunology, Oregon Health and Sciences University, Portland, Oregon, USA 2Biological Sciences Division, Earth and Biological Sciences Directorate, Pacific Northwest National Laboratory (PNNL), Richland, WA, USA 3Computing and Analytics Division, National Security Directorate PNNL, Richland, WA, USA 4Department of Biomolecular Sciences, Weizmann Institute of Science, Rehovot, Israel * Corresponding authors: Eric Barklis and Fikadu G. Tafesse Email: [email protected], [email protected] Running title: Ceramide synthase 2 effects on HIV-1 Env Keywords: ceramide, ceramide synthase, sphingolipid, human immunodeficiency virus (HIV), fusion protein 1 ABSTRACT The lipid composition of human immunodefiency virus 1 (HIV-1) virions is enriched in sphingomyelin, but the roles that sphingomyelin or other sphingolipids might play in the HIV-1 replication pathway have not been elucidated. In human cells, sphingolipid levels are regulated by ceramide synthase (CerS) enzymes that lead to the production of ceramides, which can be converted to sphingomyelins, hexosylceramides, and other sphingolipids. In many cell types, CerS2, which catalyzes the synthesis of very long chain ceramides, is the major CerS. We have examined how CerS2 deficiency affects the assembly and infectivity of HIV-1. As expected, we observed that very long chain ceramide, hexosylceramide, and sphingomyelin levels were reduced in CerS2 knockout cells. CerS2 deficiency did not affect HIV-1 assembly or the incorporation of the HIV-1 envelope (Env) protein into virus particles, but it reduced the infectivites of viruses produced in the CerS2-deficient cells.
    [Show full text]
  • Sphingolipids
    Ectopic expression of ceramide synthase 2 in neurons suppresses neurodegeneration induced by ceramide synthase 1 deficiency Stefka D. Spassievaa,1, Xiaojie Jib,c,1, Ye Liub, Kenneth Gabled, Jacek Bielawskie, Teresa M. Dunnd, Erhard Bieberichf, and Lihong Zhaob,2 aDepartment of Molecular and Cellular Medicine, Texas A&M Health Science Center, College Station, TX 77843; bThe Jackson Laboratory, Bar Harbor, ME 04609; cGraduate School of Biomedical Science and Engineering, University of Maine, Orono, ME 04469; dDepartment of Biochemistry and Molecular Biology, Uniformed Services University of the Health Sciences, Bethesda, MD 20814; eDepartment of Biochemistry and Molecular Biology, Medical University of South Carolina, Charleston, SC 29425; and fDepartment of Neuroscience and Regenerative Medicine, Medical College of Georgia/Augusta University, Augusta, GA 30912 Edited by David W. Russell, University of Texas Southwestern Medical Center, Dallas, TX, and approved April 13, 2016 (received for review December 7, 2015) Sphingolipids exhibit extreme functional and chemical diversity suggested to cause apoptosis in certain cancer cells, whereas that is in part determined by their hydrophobic moiety, ceramide. ceramide with a C16 fatty acyl chain (C16 ceramide) has been In mammals, the fatty acyl chain length variation of ceramides is considered prosurvival (10–12). The ceramide profile changes in determined by six (dihydro)ceramide synthase (CerS) isoforms. aging and neurodegenerative brains, but whether these alterations Previously, we and others
    [Show full text]
  • Ceramide Synthase TLCD3B Is a Novel Gene Associated with Human Recessive Retinal Dystrophy
    Ceramide synthase TLCD3B is a novel gene associated with human recessive retinal dystrophy Renae Elaine Bertrand B.S.,1,2 Jun Wang Ph.D.,2,3 Kaitlyn H. Xiong B.S.,2,4 Chinthana Thangavel,2,4 Xinye Qian B.A.,1,2 Rola Ba-Abbad FRCS Ph.D.,5 Qingnan Liang M.S.,1,2 Renata T. Simões,6 Shirley A. M. Sampaio,7 Keren J. Carss Ph.D.,8,9 F. Lucy Raymond M.D. Ph.D.,8,10 Anthony G. Robson M.Sc. Ph.D.,11 Andrew R. Webster FRCOphth,5,11 Gavin Arno Ph.D.,5,11,12 Fernanda Belga Ottoni Porto M.D. Ph.D.,7 Rui Chen Ph.D.2,3,* 1 Verna and Marrs McLean Department of Biochemistry and Molecular Biology, Baylor College of Medicine, Houston, TX 77030, USA 2 Human Genome Sequencing Center, Baylor College of Medicine, Houston, TX 77030, USA 3 Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA 4 Department of BioSciences, Rice University, Houston, TX 77005, USA 5 Moorfields Eye Hospital, London, EC1V 2PD, UK 6 Instituto de Ensino e Pesquisa da Santa Casa de Belo Horizonte (IEP/SCBH), Minas Gerais, Brazil 7 INRET Clínica e Centro de Pesquisa, Belo Horizonte, Minas Gerais, Brazil 8 Department of Haematology, University of Cambridge, Cambridge, UK 9 NIHR BioResource-Rare Diseases, Cambridge University Hospitals, Cambridge Biomedical Campus, Cambridge, UK 10 Department of Medical Genetics, Cambridge Institute for Medical Research, University of Cambridge, Cambridge, UK 11 UCL Institute of Ophthalmology, London, EC1V 9EL, UK 12 Great Ormond Street Hospital for Children, London, UK * Rui Chen, 713-798-5194, [email protected] 1 ABSTRACT Purpose Previous studies suggest that ceramide is a proapoptotic lipid as high levels of ceramides can lead to apoptosis of neuronal cells, including photoreceptors.
    [Show full text]
  • Biological Functions of Sphingomyelin Synthase Related Protein and Ceramide Synthase 4 Investigated with Transgenic Mouse Mutants
    Biological functions of Sphingomyelin synthase related protein and Ceramide synthase 4 investigated with transgenic mouse mutants Dissertation Zur Erlangung des Doktorgrades (Dr. rer. nat.) der Mathematisch-Naturwissenschaftlichen Fakultät der Rheinischen Friedrich-Wilhelms-Universität Bonn vorgelegt von Andreas Bickert aus Neuwied Bonn, 2016 Angefertigt mit Genehmigung der Mathematisch-Naturwissenschaftlichen Fakultät der Rheinischen Friedrich-Wilhelms-Universität Bonn Erstgutachter: Prof. Dr. Klaus Willecke Zweitgutachter: Prof. Dr. Michael Hoch Tag der Promotion: 25.10.2016 Erscheinungsjahr: 2017 Table of Contents Table of Contents 1 Introduction.................................................................................................. 1 1.1 Biological lipids ............................................................................................ 1 1.2 Eucaryotic membranes ................................................................................ 3 1.3 Sphingolipids ............................................................................................... 5 1.3.1 Sphingolipid metabolic pathway ................................................................. 6 1.3.1.1 De novo sphingolipid biosynthesis .......................................................... 8 1.3.1.2 The ceramide transfer protein ................................................................. 8 1.3.1.3 Biosynthesis of complex sphingolipids .................................................... 9 1.3.1.4 Sphingolipid degradation and the salvage
    [Show full text]
  • Altered Mrna Expression Levels of the Major Components of Sphingolipid Metabolism, Ceramide Synthases and Their Clinical Implication in Colorectal Cancer
    ONCOLOGY REPORTS 40: 3489-3500, 2018 Altered mRNA expression levels of the major components of sphingolipid metabolism, ceramide synthases and their clinical implication in colorectal cancer SUNG WON JANG1*, WOO-JAE PARK2*, HYEONJI MIN3, TAEG KYU KWON3,4, SEONG KYU BAEK5, ILSEON HWANG6, SHIN KIM3,4 and JONG-WOOK PARK3,4 1Department of Emergency Medicine, Dongsan Medical Center, Keimyung University, Daegu 41931; 2Department of Biochemistry, College of Medicine, Gachon University, Incheon 21999; 3Department of Immunology, School of Medicine and 4Institute of Medical Science, Keimyung University, Daegu 42601; 5Department of Surgery, Dongsan Medical Center, Keimyung University, Daegu 41931; 6Department of Pathology, School of Medicine, Keimyung University, Daegu 42601, Republic of Korea Received January 11, 2018; Accepted September 3, 2018 DOI: 10.3892/or.2018.6712 Abstract. Ceramide synthases (CerSs) synthesize various CERS5 mRNA levels in The Cancer Genome Atlas Colon ceramides of different acyl chain lengths and serve important and Rectal Cancer dataset. Notably, CERS2 and CERS4, as roles in the proliferation and death of cancer cells by regu- well as CERS5 and CERS6 levels, were positively correlated lating sphingolipid metabolism-related signaling pathways. with each other in Korean patients with CRC. However, the The present study investigated the mRNA expression levels mRNA expression levels of these four CerS genes were not of various CerS genes using mRNA expression data from six associated with any clinicopathological characteristics in independent colorectal cancer (CRC) cohorts and a Korean Korean patients with CRC. Finally, overexpressing CERS2 or CRC dataset. Expression levels of CERS2, CERS5 and CERS6 inhibited the in vitro viability of various CRC cells.
    [Show full text]
  • Agricultural University of Athens
    ΓΕΩΠΟΝΙΚΟ ΠΑΝΕΠΙΣΤΗΜΙΟ ΑΘΗΝΩΝ ΣΧΟΛΗ ΕΠΙΣΤΗΜΩΝ ΤΩΝ ΖΩΩΝ ΤΜΗΜΑ ΕΠΙΣΤΗΜΗΣ ΖΩΙΚΗΣ ΠΑΡΑΓΩΓΗΣ ΕΡΓΑΣΤΗΡΙΟ ΓΕΝΙΚΗΣ ΚΑΙ ΕΙΔΙΚΗΣ ΖΩΟΤΕΧΝΙΑΣ ΔΙΔΑΚΤΟΡΙΚΗ ΔΙΑΤΡΙΒΗ Εντοπισμός γονιδιωματικών περιοχών και δικτύων γονιδίων που επηρεάζουν παραγωγικές και αναπαραγωγικές ιδιότητες σε πληθυσμούς κρεοπαραγωγικών ορνιθίων ΕΙΡΗΝΗ Κ. ΤΑΡΣΑΝΗ ΕΠΙΒΛΕΠΩΝ ΚΑΘΗΓΗΤΗΣ: ΑΝΤΩΝΙΟΣ ΚΟΜΙΝΑΚΗΣ ΑΘΗΝΑ 2020 ΔΙΔΑΚΤΟΡΙΚΗ ΔΙΑΤΡΙΒΗ Εντοπισμός γονιδιωματικών περιοχών και δικτύων γονιδίων που επηρεάζουν παραγωγικές και αναπαραγωγικές ιδιότητες σε πληθυσμούς κρεοπαραγωγικών ορνιθίων Genome-wide association analysis and gene network analysis for (re)production traits in commercial broilers ΕΙΡΗΝΗ Κ. ΤΑΡΣΑΝΗ ΕΠΙΒΛΕΠΩΝ ΚΑΘΗΓΗΤΗΣ: ΑΝΤΩΝΙΟΣ ΚΟΜΙΝΑΚΗΣ Τριμελής Επιτροπή: Aντώνιος Κομινάκης (Αν. Καθ. ΓΠΑ) Ανδρέας Κράνης (Eρευν. B, Παν. Εδιμβούργου) Αριάδνη Χάγερ (Επ. Καθ. ΓΠΑ) Επταμελής εξεταστική επιτροπή: Aντώνιος Κομινάκης (Αν. Καθ. ΓΠΑ) Ανδρέας Κράνης (Eρευν. B, Παν. Εδιμβούργου) Αριάδνη Χάγερ (Επ. Καθ. ΓΠΑ) Πηνελόπη Μπεμπέλη (Καθ. ΓΠΑ) Δημήτριος Βλαχάκης (Επ. Καθ. ΓΠΑ) Ευάγγελος Ζωίδης (Επ.Καθ. ΓΠΑ) Γεώργιος Θεοδώρου (Επ.Καθ. ΓΠΑ) 2 Εντοπισμός γονιδιωματικών περιοχών και δικτύων γονιδίων που επηρεάζουν παραγωγικές και αναπαραγωγικές ιδιότητες σε πληθυσμούς κρεοπαραγωγικών ορνιθίων Περίληψη Σκοπός της παρούσας διδακτορικής διατριβής ήταν ο εντοπισμός γενετικών δεικτών και υποψηφίων γονιδίων που εμπλέκονται στο γενετικό έλεγχο δύο τυπικών πολυγονιδιακών ιδιοτήτων σε κρεοπαραγωγικά ορνίθια. Μία ιδιότητα σχετίζεται με την ανάπτυξη (σωματικό βάρος στις 35 ημέρες, ΣΒ) και η άλλη με την αναπαραγωγική
    [Show full text]
  • Download Article (PDF)
    Article in press - uncorrected proof BioMol Concepts, Vol. 1 (2010), pp. 411–422 • Copyright ᮊ by Walter de Gruyter • Berlin • New York. DOI 10.1515/BMC.2010.028 Review Ceramide synthases in mammalians, worms, and insects: emerging schemes Andre´ Voelzmann and Reinhard Bauer* plasmic reticulum (ER) by condensing activated palmitate LIMES Institute, Program Unit Development and Genetics, (palmitoyl-CoA) with L-serine through the activity of serine Laboratory for Molecular Developmental Biology, palmitoyl transferase (SPT); (3). The formed intermediate University of Bonn, Carl-Troll-Str. 31, D-53115 Bonn, 3-ketosphinganine is then turned to sphinganine by the 3- Germany ketosphinganine reductase (4). CerS now catalyze the CoA- dependent dihydroceramide synthesis. In this step, CoA * Corresponding author activated fatty acids are used for aminoacylation of sphin- e-mail: [email protected] ganine carbon-2 (Figure 1). The generated dihydroceramide is further converted to ceramide by dihydroceramide desa- turase. Initially, the molecular identity of enzymes and bio- Abstract chemical pathways of the de novo biosynthetic pathway have The ceramide synthase (CerS) gene family comprises a been identified and characterized, especially in mammalian group of highly conserved transmembrane proteins, which cells and the budding yeast Saccharomyces cerevisiae (5–7). are found in all studied eukaryotes. The key feature of the Thus, it became evident that these lipids and enzymes were CerS proteins is their role in ceramide synthase activity. conserved across species and phyla. Therefore, their original name ‘longevity assurance gene (Lass) homologs’, after the founding member, the yeast lon- gevity assurance gene lag1, was altered to ‘CerS’. All CerS Identification of ceramide synthases have high sequence similarity in a domain called LAG1 motif and a subset of CerS proteins is predicted to contain a Although CerS activity was detected previously in 1970 (8), Homeobox (Hox) domain.
    [Show full text]
  • Supporting Information
    Supporting Information Jensen et al. 10.1073/pnas.1316700111 SI Materials and Methods Western Blot Analysis. For all Western blot analyses, proteins were Cloning of Bcl2L13 and Mutagenesis of Bcl2L13. Full-length Bcl2-like separated by 4–12% SDS/PAGE (Life Technologies), transferred 13 (Bcl2L13) was cloned into pCDNA3-V5-His (Invitrogen) to Hybond PVDF membranes (Amersham), blocked with 5% using unique EcoRV/XhoI restriction sites and into the CSII- (wt/vol) milk in PBS with 0.1% Tween 20 (PBS/Tween) for 1 h, CMV-MCS-IRES2-Venus lentiviral vector via NheI/AgeI re- washed with PBS/Tween, and incubated with the following an- striction sites. To delete the BHNo domain (amino acids 207–459, tibodies: anti-actin (Santa Cruz), anti-Bax (Millipore), anti- – base pairs 621–1377) of Bcl2L13, mutagenesis PCR was em- Bcl2L13 (Proteintech), anti cleaved caspase-3 (Cell Signaling), – – ployed using primers ATACTGCTGTTTGGAGGGGCTGCT- anti cleaved caspase-7 (Cell Signaling), anti cleaved caspase-9 GCTGTTGCC and AAGACTAAACACACAGTGCCCCAGC- (Cell Signaling), anti-COXIV (Cell Signaling), anti-COX17 (Santa Cruz), anti–Bcl-2 (Millipore), anti–Bcl-x (Cell Signaling), CACCTTG that amplified a mutant Bcl2L13 lacking the BHNo L anti-Bak (Cell Signaling), anti-Hsp70 (BD Pharmingen), anti- domain (ΔBHNo). The mutant PCR product was ligated back LASS2 (CerS2; Abnova), anti-LASS6 (CerS6; Abnova), anti- together and was transformed. FLAG (Sigma), anti-HA (Santa Cruz), and anti-V5 (Invitrogen). Lentiviral Production and Infection. 293FT cells were plated in a The blots were washed with PBS/Tween and subsequently were 10-cm dish at 3 × 106 cells per plate. After 24 h, cells were trans- incubated with goat anti-rabbit IgG or with goat anti-mouse fected with 3 μg of target lentiviral construct, 1.25 μg of pMD2.G antibodies (Santa Cruz) in 5% (wt/vol) milk PBS/Tween.
    [Show full text]