Recent Advances in Science in Western Australia
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What Can We Learn from Confusing Olivella Columellaris and O
Biota Neotrop., vol. 12, no. 2 What can we learn from confusing Olivella columellaris and O. semistriata (Olivellidae, Gastropoda), two key species in panamic sandy beach ecosystems? Alison I. Troost1, Samantha D. Rupert1, Ariel Z. Cyrus1,. Frank V Paladino1,2, Benjamin F. Dattilo3 & Winfried S. Peters1,2,4 1Department of Biology, Indiana/Purdue University Fort Wayne, 2101 East Coliseum Boulevard, Fort Wayne, IN 46805‑1499, USA 2Goldring Marine Biology Station, Playa Grande, Santa Cruz, Guanacaste, Costa Rica 3Department of Geosciences, Indiana/Purdue University Fort Wayne, 2101 East Coliseum Boulevard, Fort Wayne, IN 46805‑1499, USA 4Corresponding author: Winfried S. Peters, e‑mail: [email protected] TROOST, A.I., RUPERT, S.D., CYRUS, A.Z., PALADINO, F.V., DATTILO, B.F. & PETERS, W.S. What can we learn from confusing Olivella columellaris and O. semistriata (Olivellidae, Gastropoda), two key species in panamic sandy beach ecosystems? Biota Neotrop. 12(2): http://www.biotaneotropica.org.br/v12n2/ en/abstract?article+bn02112022012 Abstract: Olivella columellaris (Sowerby 1825) and O. semistriata (Gray 1839) are suspension‑feeding, swash‑surfing snails on tropical sandy beaches of the east Pacific. While they often are the numerically dominant macrofaunal element in their habitats, their biology is poorly understood; the two species actually have been confused in all of the few publications that address their ecology. Frequent misidentifications in publications and collections contributed also to an overestimation of the geographic overlap of the two species. To provide a sound taxonomic basis for further functional, ecological, and evolutionary investigations, we evaluated the validity of diagnostic traits in wild populations and museum collections, and defined workable identification criteria. -
Risk Analysis of Alien Grasses Occurring in South Africa
Risk analysis of alien grasses occurring in South Africa By NKUNA Khensani Vulani Thesis presented in partial fulfilment of the requirements for the degree of Master of Science at Stellenbosch University (Department of Botany and Zoology) Supervisor: Dr. Sabrina Kumschick Co-supervisor (s): Dr. Vernon Visser : Prof. John R. Wilson Department of Botany & Zoology Faculty of Science Stellenbosch University December 2018 Stellenbosch University https://scholar.sun.ac.za Declaration By submitting this thesis/dissertation electronically, I declare that the entirety of the work contained therein is my own, original work, that I am the sole author thereof (save to the extent explicitly otherwise stated), that reproduction and publication thereof by Stellenbosch University will not infringe any third party rights and that I have not previously in its entirety or in part submitted it for obtaining any qualification. Date: December 2018 Copyright © 2018 Stellenbosch University All rights reserved i Stellenbosch University https://scholar.sun.ac.za Abstract Alien grasses have caused major impacts in their introduced ranges, including transforming natural ecosystems and reducing agricultural yields. This is clearly of concern for South Africa. However, alien grass impacts in South Africa are largely unknown. This makes prioritising them for management difficult. In this thesis, I investigated the negative environmental and socio-economic impacts of 58 alien grasses occurring in South Africa from 352 published literature sources, the mechanisms through which they cause impacts, and the magnitudes of those impacts across different habitats and regions. Through this assessment, I ranked alien grasses based on their maximum recorded impact. Cortaderia sellonoana had the highest overall impact score, followed by Arundo donax, Avena fatua, Elymus repens, and Festuca arundinacea. -
Root-Knot Nematodes: Abundance in Organic Farming, Differentiation Among Populations, Microbes Attached to Juveniles in Soil, and Bacterial Antagonists
Mohamed Adam Mohamed Abdou Institut für Epidemiologie und Pathogendiagnostik Root-knot nematodes: abundance in organic farming, diff erentiation among populations, microbes attached to juveniles in soil, and bacterial antagonists Dissertationen aus dem Julius Kühn-Institut Julius Kühn-Institut Bundesforschungsinstitut für Kulturpfl anzen Kontakt: Mohamed Adam Mohamed Abdou Julius Kühn-Institut, Bundesforschungsinstitut für Kulturpflanzen (JKI) Institut für Epidemiologie und Pathogendiagnostik Messeweg 11/12 38104 Braunschweig Germany Von der Fakultät Architektur, Bauingenieurwesen und Umweltwissenschaften der Technischen Universität Carolo-Wilhelmina zu Braunschweig zur Erlangung des Grades eines Doktors der Naturwissenschaften (Dr. rer. nat.) genehmigte Dissertation Die Schriftenreihe ,,Dissertationen aus dem Julius Kühn-lnstitut" veröffentlicht Doktorarbeiten, die in enger Zusammenarbeit mit Universitäten an lnstituten des Julius Kühn-lnstituts entstanden sind Der Vertrieb dieser Monographien erfolgt über den Buchhandel (Nachweis im Verzeichnis lieferbarer Bücher - VLB) und OPEN ACCESS im lnternetangebot www.jki.bund.de Bereich Veröffentlichungen. Wir unterstützen den offenen Zugang zu wissenschaftlichem Wissen. Die Dissertationen aus dem Julius Kühn-lnstitut erscheinen daher OPEN ACCESS. Alle Ausgaben stehen kostenfrei im lnternet zur Verfügung: http://www.jki.bund.de Bereich Veröffentlichungen We advocate open access to scientific knowledge. Dissertations from the Julius Kühn-lnstitut are therefore published open access. All issues -
The Emergence of Cereal Fungal Diseases and the Incidence of Leaf Spot Diseases in Finland
AGRICULTURAL AND FOOD SCIENCE AGRICULTURAL AND FOOD SCIENCE Vol. 20 (2011): 62–73. Vol. 20(2011): 62–73. The emergence of cereal fungal diseases and the incidence of leaf spot diseases in Finland Marja Jalli, Pauliina Laitinen and Satu Latvala MTT Agrifood Research Finland, Plant Production Research, FI-31600 Jokioinen, Finland, email: [email protected] Fungal plant pathogens causing cereal diseases in Finland have been studied by a literature survey, and a field survey of cereal leaf spot diseases conducted in 2009. Fifty-seven cereal fungal diseases have been identified in Finland. The first available references on different cereal fungal pathogens were published in 1868 and the most recent reports are on the emergence of Ramularia collo-cygni and Fusarium langsethiae in 2001. The incidence of cereal leaf spot diseases has increased during the last 40 years. Based on the field survey done in 2009 in Finland, Pyrenophora teres was present in 86%, Cochliobolus sativus in 90% and Rhynchosporium secalis in 52% of the investigated barley fields.Mycosphaerella graminicola was identi- fied for the first time in Finnish spring wheat fields, being present in 6% of the studied fields.Stagonospora nodorum was present in 98% and Pyrenophora tritici-repentis in 94% of spring wheat fields. Oat fields had the fewest fungal diseases. Pyrenophora chaetomioides was present in 63% and Cochliobolus sativus in 25% of the oat fields studied. Key-words: Plant disease, leaf spot disease, emergence, cereal, barley, wheat, oat Introduction nbrock and McDonald 2009). Changes in cropping systems and in climate are likely to maintain the plant-pathogen interactions (Gregory et al. -
Shropshire Fungus Checklist 2010
THE CHECKLIST OF SHROPSHIRE FUNGI 2011 Contents Page Introduction 2 Name changes 3 Taxonomic Arrangement (with page numbers) 19 Checklist 25 Indicator species 229 Rare and endangered fungi in /Shropshire (Excluding BAP species) 230 Important sites for fungi in Shropshire 232 A List of BAP species and their status in Shropshire 233 Acknowledgements and References 234 1 CHECKLIST OF SHROPSHIRE FUNGI Introduction The county of Shropshire (VC40) is large and landlocked and contains all major habitats, apart from coast and dune. These include the uplands of the Clees, Stiperstones and Long Mynd with their associated heath land, forested land such as the Forest of Wyre and the Mortimer Forest, the lowland bogs and meres in the north of the county, and agricultural land scattered with small woodlands and copses. This diversity makes Shropshire unique. The Shropshire Fungus Group has been in existence for 18 years. (Inaugural meeting 6th December 1992. The aim was to produce a fungus flora for the county. This aim has not yet been realised for a number of reasons, chief amongst these are manpower and cost. The group has however collected many records by trawling the archives, contributions from interested individuals/groups, and by field meetings. It is these records that are published here. The first Shropshire checklist was published in 1997. Many more records have now been added and nearly 40,000 of these have now been added to the national British Mycological Society’s database, the Fungus Record Database for Britain and Ireland (FRDBI). During this ten year period molecular biology, i.e. DNA analysis has been applied to fungal classification. -
Agricultural and Food Science, Vol. 20 (2011): 117 S
AGRICULTURAL AND FOOD A gricultural A N D F O O D S ci ence Vol. 20, No. 1, 2011 Contents Hyvönen, T. 1 Preface Agricultural anD food science Hakala, K., Hannukkala, A., Huusela-Veistola, E., Jalli, M. and Peltonen-Sainio, P. 3 Pests and diseases in a changing climate: a major challenge for Finnish crop production Heikkilä, J. 15 A review of risk prioritisation schemes of pathogens, pests and weeds: principles and practices Lemmetty, A., Laamanen J., Soukainen, M. and Tegel, J. 29 SC Emerging virus and viroid pathogen species identified for the first time in horticultural plants in Finland in IENCE 1997–2010 V o l . 2 0 , N o . 1 , 2 0 1 1 Hannukkala, A.O. 42 Examples of alien pathogens in Finnish potato production – their introduction, establishment and conse- quences Special Issue Jalli, M., Laitinen, P. and Latvala, S. 62 The emergence of cereal fungal diseases and the incidence of leaf spot diseases in Finland Alien pest species in agriculture and Lilja, A., Rytkönen, A., Hantula, J., Müller, M., Parikka, P. and Kurkela, T. 74 horticulture in Finland Introduced pathogens found on ornamentals, strawberry and trees in Finland over the past 20 years Hyvönen, T. and Jalli, H. 86 Alien species in the Finnish weed flora Vänninen, I., Worner, S., Huusela-Veistola, E., Tuovinen, T., Nissinen, A. and Saikkonen, K. 96 Recorded and potential alien invertebrate pests in Finnish agriculture and horticulture Saxe, A. 115 Letter to Editor. Third sector organizations in rural development: – A Comment. Valentinov, V. 117 Letter to Editor. Third sector organizations in rural development: – Reply. -
Zoology Honours 2009: Research Projects
Zoology Honours 2009: Research Projects Below are a number of research projects suggested by Animal Biology staff members. This is not the definitive list, and students are encouraged to approach appropriate academic staff within the School of Animal Biology if they have ideas for a research project, or if they want to discuss the possibility of a project within a particular subject area. Staff interests and contact links can be found on the web site [http://www.animals.uwa.edu.au/home/research]. Interested students should contact the Zoology Hons Coordinator [[email protected]] for more details. Conservation genetics: measuring genetic mixing in a translocated population of marine snail Jason Kennington & Mike Johnson [contact [email protected]] Translocation is a management tool that is often used to combat the loss of genetic diversity within small and fragmented populations of rare species (Allendorf & Luikart 2006; Frankham et al. 2002). It involves the movement of individuals between populations with the aim of increasing genetic variation within populations by artificially enhancing gene flow (Storfer 1999; Frankham et al. 2002). In support of this concept, several studies have shown that genetic diversity within small and inbred populations can be restored by natural migration and intentional translocation programs (see Frankham 2005). However, relatively few studies have undertaken post-release monitoring of translocated populations to see if the variation introduced by translocation is maintained over many generations. The aim of this project is to examine the extent of genetic mixing in artificial hybrid populations of the intertidal snail Bembicium vittatum, established in 1993 (Parsons 1997). -
Ohio Plant Disease Index
Special Circular 128 December 1989 Ohio Plant Disease Index The Ohio State University Ohio Agricultural Research and Development Center Wooster, Ohio This page intentionally blank. Special Circular 128 December 1989 Ohio Plant Disease Index C. Wayne Ellett Department of Plant Pathology The Ohio State University Columbus, Ohio T · H · E OHIO ISJATE ! UNIVERSITY OARilL Kirklyn M. Kerr Director The Ohio State University Ohio Agricultural Research and Development Center Wooster, Ohio All publications of the Ohio Agricultural Research and Development Center are available to all potential dientele on a nondiscriminatory basis without regard to race, color, creed, religion, sexual orientation, national origin, sex, age, handicap, or Vietnam-era veteran status. 12-89-750 This page intentionally blank. Foreword The Ohio Plant Disease Index is the first step in develop Prof. Ellett has had considerable experience in the ing an authoritative and comprehensive compilation of plant diagnosis of Ohio plant diseases, and his scholarly approach diseases known to occur in the state of Ohia Prof. C. Wayne in preparing the index received the acclaim and support .of Ellett had worked diligently on the preparation of the first the plant pathology faculty at The Ohio State University. edition of the Ohio Plant Disease Index since his retirement This first edition stands as a remarkable ad substantial con as Professor Emeritus in 1981. The magnitude of the task tribution by Prof. Ellett. The index will serve us well as the is illustrated by the cataloguing of more than 3,600 entries complete reference for Ohio for many years to come. of recorded diseases on approximately 1,230 host or plant species in 124 families. -
Marine Genomics Meets Ecology: Diversity and Divergence in South
Marine genomics meets ecology: Diversity and divergence in South African sea stars of the genus Parvulastra Katherine Dunbar Thesis submitted for the degree of Doctor of Philosophy Biodiversity and Ecological Processes Research Group School of Biosciences Cardiff University December 2006 UMI Number: U584961 All rights reserved INFORMATION TO ALL USERS The quality of this reproduction is dependent upon the quality of the copy submitted. In the unlikely event that the author did not send a complete manuscript and there are missing pages, these will be noted. Also, if material had to be removed, a note will indicate the deletion. Dissertation Publishing UMI U584961 Published by ProQuest LLC 2013. Copyright in the Dissertation held by the Author. Microform Edition © ProQuest LLC. All rights reserved. This work is protected against unauthorized copying under Title 17, United States Code. ProQuest LLC 789 East Eisenhower Parkway P.O. Box 1346 Ann Arbor, Ml 48106-1346 DECLARATION This work has not previously been substance for any degree and is not being concurrently submitted in c y degree. Signed ................................(candidate) Date.... 3 l . ™ MW. ... ..... STATEMENT 1 This thesis is the result of my own M ent work/investigation, except where otherwise stated. Other source* edged by footnotes giving explicit references. Signed (candidate) S.**: Q tife : ...... STATEMENT 2 I hereby give consent for my thesis, if accepted, to be available for photocopying and for inter-library loan, and for the tJfJSJa^^prrmqary to be made available to outside organisations Signed ................................................................... (candidate) Date............................. Abstract The coast of South Africa is situated between the warm Indian and the cold Atlantic Oceans, resulting in an extreme intertidal temperature gradient and potentially strong opposing selection pressures between the east and west coasts. -
Mitochondrial DNA Hyperdiversity and Population Genetics in the Periwinkle Melarhaphe Neritoides (Mollusca: Gastropoda)
Mitochondrial DNA hyperdiversity and population genetics in the periwinkle Melarhaphe neritoides (Mollusca: Gastropoda) Séverine Fourdrilis Université Libre de Bruxelles | Faculty of Sciences Royal Belgian Institute of Natural Sciences | Directorate Taxonomy & Phylogeny Thesis submitted in fulfilment of the requirements for the degree of Doctor (PhD) in Sciences, Biology Date of the public viva: 28 June 2017 © 2017 Fourdrilis S. ISBN: The research presented in this thesis was conducted at the Directorate Taxonomy and Phylogeny of the Royal Belgian Institute of Natural Sciences (RBINS), and in the Evolutionary Ecology Group of the Free University of Brussels (ULB), Brussels, Belgium. This research was funded by the Belgian federal Science Policy Office (BELSPO Action 1 MO/36/027). It was conducted in the context of the Research Foundation – Flanders (FWO) research community ‘‘Belgian Network for DNA barcoding’’ (W0.009.11N) and the Joint Experimental Molecular Unit at the RBINS. Please refer to this work as: Fourdrilis S (2017) Mitochondrial DNA hyperdiversity and population genetics in the periwinkle Melarhaphe neritoides (Linnaeus, 1758) (Mollusca: Gastropoda). PhD thesis, Free University of Brussels. ii PROMOTERS Prof. Dr. Thierry Backeljau (90 %, RBINS and University of Antwerp) Prof. Dr. Patrick Mardulyn (10 %, Free University of Brussels) EXAMINATION COMMITTEE Prof. Dr. Thierry Backeljau (RBINS and University of Antwerp) Prof. Dr. Sofie Derycke (RBINS and Ghent University) Prof. Dr. Jean-François Flot (Free University of Brussels) Prof. Dr. Marc Kochzius (Vrije Universiteit Brussel) Prof. Dr. Patrick Mardulyn (Free University of Brussels) Prof. Dr. Nausicaa Noret (Free University of Brussels) iii Acknowledgements Let’s be sincere. PhD is like heaven! You savour each morning this taste of paradise, going at work to work on your passion, science. -
Nematology Training Manual
NIESA Training Manual NEMATOLOGY TRAINING MANUAL FUNDED BY NIESA and UNIVERSITY OF NAIROBI, CROP PROTECTION DEPARTMENT CONTRIBUTORS: J. Kimenju, Z. Sibanda, H. Talwana and W. Wanjohi 1 NIESA Training Manual CHAPTER 1 TECHNIQUES FOR NEMATODE DIAGNOSIS AND HANDLING Herbert A. L. Talwana Department of Crop Science, Makerere University P. O. Box 7062, Kampala Uganda Section Objectives Going through this section will enrich you with skill to be able to: diagnose nematode problems in the field considering all aspects involved in sampling, extraction and counting of nematodes from soil and plant parts, make permanent mounts, set up and maintain nematode cultures, design experimental set-ups for tests with nematodes Section Content sampling and quantification of nematodes extraction methods for plant-parasitic nematodes, free-living nematodes from soil and plant parts mounting of nematodes, drawing and measuring of nematodes, preparation of nematode inoculum and culturing nematodes, set-up of tests for research with plant-parasitic nematodes, A. Nematode sampling Unlike some pests and diseases, nematodes cannot be monitored by observation in the field. Nematodes must be extracted for microscopic examination in the laboratory. Nematodes can be collected by sampling soil and plant materials. There is no problem in finding nematodes, but getting the species and numbers you want may be trickier. In general, natural and undisturbed habitats will yield greater diversity and more slow-growing nematode species, while temporary and/or disturbed habitats will yield fewer and fast- multiplying species. Sampling considerations Getting nematodes in a sample that truly represent the underlying population at a given time requires due attention to sample size and depth, time and pattern of sampling, and handling and storage of samples. -
Proposed Generic Names for Dothideomycetes
Naming and outline of Dothideomycetes–2014 Nalin N. Wijayawardene1, 2, Pedro W. Crous3, Paul M. Kirk4, David L. Hawksworth4, 5, 6, Dongqin Dai1, 2, Eric Boehm7, Saranyaphat Boonmee1, 2, Uwe Braun8, Putarak Chomnunti1, 2, , Melvina J. D'souza1, 2, Paul Diederich9, Asha Dissanayake1, 2, 10, Mingkhuan Doilom1, 2, Francesco Doveri11, Singang Hongsanan1, 2, E.B. Gareth Jones12, 13, Johannes Z. Groenewald3, Ruvishika Jayawardena1, 2, 10, James D. Lawrey14, Yan Mei Li15, 16, Yong Xiang Liu17, Robert Lücking18, Hugo Madrid3, Dimuthu S. Manamgoda1, 2, Jutamart Monkai1, 2, Lucia Muggia19, 20, Matthew P. Nelsen18, 21, Ka-Lai Pang22, Rungtiwa Phookamsak1, 2, Indunil Senanayake1, 2, Carol A. Shearer23, Satinee Suetrong24, Kazuaki Tanaka25, Kasun M. Thambugala1, 2, 17, Saowanee Wikee1, 2, Hai-Xia Wu15, 16, Ying Zhang26, Begoña Aguirre-Hudson5, Siti A. Alias27, André Aptroot28, Ali H. Bahkali29, Jose L. Bezerra30, Jayarama D. Bhat1, 2, 31, Ekachai Chukeatirote1, 2, Cécile Gueidan5, Kazuyuki Hirayama25, G. Sybren De Hoog3, Ji Chuan Kang32, Kerry Knudsen33, Wen Jing Li1, 2, Xinghong Li10, ZouYi Liu17, Ausana Mapook1, 2, Eric H.C. McKenzie34, Andrew N. Miller35, Peter E. Mortimer36, 37, Dhanushka Nadeeshan1, 2, Alan J.L. Phillips38, Huzefa A. Raja39, Christian Scheuer19, Felix Schumm40, Joanne E. Taylor41, Qing Tian1, 2, Saowaluck Tibpromma1, 2, Yong Wang42, Jianchu Xu3, 4, Jiye Yan10, Supalak Yacharoen1, 2, Min Zhang15, 16, Joyce Woudenberg3 and K. D. Hyde1, 2, 37, 38 1Institute of Excellence in Fungal Research and 2School of Science, Mae Fah Luang University,