AR TICLE New Species of Auritella (Inocybaceae) From
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Major Clades of Agaricales: a Multilocus Phylogenetic Overview
Mycologia, 98(6), 2006, pp. 982–995. # 2006 by The Mycological Society of America, Lawrence, KS 66044-8897 Major clades of Agaricales: a multilocus phylogenetic overview P. Brandon Matheny1 Duur K. Aanen Judd M. Curtis Laboratory of Genetics, Arboretumlaan 4, 6703 BD, Biology Department, Clark University, 950 Main Street, Wageningen, The Netherlands Worcester, Massachusetts, 01610 Matthew DeNitis Vale´rie Hofstetter 127 Harrington Way, Worcester, Massachusetts 01604 Department of Biology, Box 90338, Duke University, Durham, North Carolina 27708 Graciela M. Daniele Instituto Multidisciplinario de Biologı´a Vegetal, M. Catherine Aime CONICET-Universidad Nacional de Co´rdoba, Casilla USDA-ARS, Systematic Botany and Mycology de Correo 495, 5000 Co´rdoba, Argentina Laboratory, Room 304, Building 011A, 10300 Baltimore Avenue, Beltsville, Maryland 20705-2350 Dennis E. Desjardin Department of Biology, San Francisco State University, Jean-Marc Moncalvo San Francisco, California 94132 Centre for Biodiversity and Conservation Biology, Royal Ontario Museum and Department of Botany, University Bradley R. Kropp of Toronto, Toronto, Ontario, M5S 2C6 Canada Department of Biology, Utah State University, Logan, Utah 84322 Zai-Wei Ge Zhu-Liang Yang Lorelei L. Norvell Kunming Institute of Botany, Chinese Academy of Pacific Northwest Mycology Service, 6720 NW Skyline Sciences, Kunming 650204, P.R. China Boulevard, Portland, Oregon 97229-1309 Jason C. Slot Andrew Parker Biology Department, Clark University, 950 Main Street, 127 Raven Way, Metaline Falls, Washington 99153- Worcester, Massachusetts, 01609 9720 Joseph F. Ammirati Else C. Vellinga University of Washington, Biology Department, Box Department of Plant and Microbial Biology, 111 355325, Seattle, Washington 98195 Koshland Hall, University of California, Berkeley, California 94720-3102 Timothy J. -
Into One of the Two Major Cora Clades (Lücking Et Al
Fungal Diversity into one of the two major Cora clades (Lücking et al. 2014). A (2013). Both share the strongly appressed, filamentous thallus closer relative of C. barbulata is the terrestrial C. arachnoidea in which the horizontally oriented fibrils are embedded in a J. E. Hern. & Lücking (Fig. 128a–c), which is grey-brown gelatinous matrix that gives the thallus a strong metallic shim- when fresh and uniformly thinly tomentose on the upper sur- mer. While the phylogenetic distance between D. metallicum face (Lücking et al. 2013). Cora barbulata can be distin- and its sister species, D. gomezianum,isconsiderable(Dal- guished from C. aspera mainly by the coarsely crenulate, Forno et al., in prep.), the morphological differences are mi- undulate lobe margins and the different hymenophore, nor: D. metallicum has a thinner thallus with indistinct medul- forming large, irregularly dispersed patches on the underside. la, the cyanobacterial filaments are broader (likely influenced by the fungus which produces a sheath with more distinctly 217. Dictyonema gomezianum Lücking, Dal-Forno & puzzle-shaped cells), and particularly the associated fungal Lawrey, sp. nov. hyphae are thicker (4–6 μm). Inocybaceae Jülich Index Fungorum number: IF551502; Facesoffungi The family Inocybaceae is a monophyletic lineage number: FoF01050; Fig. 131d–f within Agaricales. It is species rich and has a world- Etymology: Dedicated to the late Dr. Luis Diego Gómez, wide distribution. The species are small to medium prominent Costa Rican botanist, naturalist, and conservation- sized with a brown spore deposit, and most species ist and long-time director of Las Cruces Biological Station. form ectomycorrhiza with a broad range of host trees Holotype: R. -
Fruiting Body Form, Not Nutritional Mode, Is the Major Driver of Diversification in Mushroom-Forming Fungi
Fruiting body form, not nutritional mode, is the major driver of diversification in mushroom-forming fungi Marisol Sánchez-Garcíaa,b, Martin Rybergc, Faheema Kalsoom Khanc, Torda Vargad, László G. Nagyd, and David S. Hibbetta,1 aBiology Department, Clark University, Worcester, MA 01610; bUppsala Biocentre, Department of Forest Mycology and Plant Pathology, Swedish University of Agricultural Sciences, SE-75005 Uppsala, Sweden; cDepartment of Organismal Biology, Evolutionary Biology Centre, Uppsala University, 752 36 Uppsala, Sweden; and dSynthetic and Systems Biology Unit, Institute of Biochemistry, Biological Research Center, 6726 Szeged, Hungary Edited by David M. Hillis, The University of Texas at Austin, Austin, TX, and approved October 16, 2020 (received for review December 22, 2019) With ∼36,000 described species, Agaricomycetes are among the and the evolution of enclosed spore-bearing structures. It has most successful groups of Fungi. Agaricomycetes display great di- been hypothesized that the loss of ballistospory is irreversible versity in fruiting body forms and nutritional modes. Most have because it involves a complex suite of anatomical features gen- pileate-stipitate fruiting bodies (with a cap and stalk), but the erating a “surface tension catapult” (8, 11). The effect of gas- group also contains crust-like resupinate fungi, polypores, coral teroid fruiting body forms on diversification rates has been fungi, and gasteroid forms (e.g., puffballs and stinkhorns). Some assessed in Sclerodermatineae, Boletales, Phallomycetidae, and Agaricomycetes enter into ectomycorrhizal symbioses with plants, Lycoperdaceae, where it was found that lineages with this type of while others are decayers (saprotrophs) or pathogens. We constructed morphology have diversified at higher rates than nongasteroid a megaphylogeny of 8,400 species and used it to test the following lineages (12). -
Biodiversity of Wood-Decay Fungi in Italy
AperTO - Archivio Istituzionale Open Access dell'Università di Torino Biodiversity of wood-decay fungi in Italy This is the author's manuscript Original Citation: Availability: This version is available http://hdl.handle.net/2318/88396 since 2016-10-06T16:54:39Z Published version: DOI:10.1080/11263504.2011.633114 Terms of use: Open Access Anyone can freely access the full text of works made available as "Open Access". Works made available under a Creative Commons license can be used according to the terms and conditions of said license. Use of all other works requires consent of the right holder (author or publisher) if not exempted from copyright protection by the applicable law. (Article begins on next page) 28 September 2021 This is the author's final version of the contribution published as: A. Saitta; A. Bernicchia; S.P. Gorjón; E. Altobelli; V.M. Granito; C. Losi; D. Lunghini; O. Maggi; G. Medardi; F. Padovan; L. Pecoraro; A. Vizzini; A.M. Persiani. Biodiversity of wood-decay fungi in Italy. PLANT BIOSYSTEMS. 145(4) pp: 958-968. DOI: 10.1080/11263504.2011.633114 The publisher's version is available at: http://www.tandfonline.com/doi/abs/10.1080/11263504.2011.633114 When citing, please refer to the published version. Link to this full text: http://hdl.handle.net/2318/88396 This full text was downloaded from iris - AperTO: https://iris.unito.it/ iris - AperTO University of Turin’s Institutional Research Information System and Open Access Institutional Repository Biodiversity of wood-decay fungi in Italy A. Saitta , A. Bernicchia , S. P. Gorjón , E. -
Ectomycorrhizal Fungal Community Structure in a Young Orchard of Grafted and Ungrafted Hybrid Chestnut Saplings
Mycorrhiza (2021) 31:189–201 https://doi.org/10.1007/s00572-020-01015-0 ORIGINAL ARTICLE Ectomycorrhizal fungal community structure in a young orchard of grafted and ungrafted hybrid chestnut saplings Serena Santolamazza‑Carbone1,2 · Laura Iglesias‑Bernabé1 · Esteban Sinde‑Stompel3 · Pedro Pablo Gallego1,2 Received: 29 August 2020 / Accepted: 17 December 2020 / Published online: 27 January 2021 © The Author(s) 2021 Abstract Ectomycorrhizal (ECM) fungal community of the European chestnut has been poorly investigated, and mostly by sporocarp sampling. We proposed the study of the ECM fungal community of 2-year-old chestnut hybrids Castanea × coudercii (Castanea sativa × Castanea crenata) using molecular approaches. By using the chestnut hybrid clones 111 and 125, we assessed the impact of grafting on ECM colonization rate, species diversity, and fungal community composition. The clone type did not have an impact on the studied variables; however, grafting signifcantly infuenced ECM colonization rate in clone 111. Species diversity and richness did not vary between the experimental groups. Grafted and ungrafted plants of clone 111 had a diferent ECM fungal species composition. Sequence data from ITS regions of rDNA revealed the presence of 9 orders, 15 families, 19 genera, and 27 species of ECM fungi, most of them generalist, early-stage species. Thirteen new taxa were described in association with chestnuts. The basidiomycetes Agaricales (13 taxa) and Boletales (11 taxa) represented 36% and 31%, of the total sampled ECM fungal taxa, respectively. Scleroderma citrinum, S. areolatum, and S. polyrhizum (Boletales) were found in 86% of the trees and represented 39% of total ECM root tips. The ascomycete Cenococcum geophilum (Mytilinidiales) was found in 80% of the trees but accounted only for 6% of the colonized root tips. -
Amplicon-Based Sequencing of Soil Fungi from Wood Preservative Test Sites
ORIGINAL RESEARCH published: 18 October 2017 doi: 10.3389/fmicb.2017.01997 Amplicon-Based Sequencing of Soil Fungi from Wood Preservative Test Sites Grant T. Kirker 1*, Amy B. Bishell 1, Michelle A. Jusino 2, Jonathan M. Palmer 2, William J. Hickey 3 and Daniel L. Lindner 2 1 FPL, United States Department of Agriculture-Forest Service (USDA-FS), Durability and Wood Protection, Madison, WI, United States, 2 NRS, United States Department of Agriculture-Forest Service (USDA-FS), Center for Forest Mycology Research, Madison, WI, United States, 3 Department of Soil Science, University of Wisconsin-Madison, Madison, WI, United States Soil samples were collected from field sites in two AWPA (American Wood Protection Association) wood decay hazard zones in North America. Two field plots at each site were exposed to differing preservative chemistries via in-ground installations of treated wood stakes for approximately 50 years. The purpose of this study is to characterize soil fungal species and to determine if long term exposure to various wood preservatives impacts soil fungal community composition. Soil fungal communities were compared using amplicon-based DNA sequencing of the internal transcribed spacer 1 (ITS1) region of the rDNA array. Data show that soil fungal community composition differs significantly Edited by: Florence Abram, between the two sites and that long-term exposure to different preservative chemistries National University of Ireland Galway, is correlated with different species composition of soil fungi. However, chemical analyses Ireland using ICP-OES found levels of select residual preservative actives (copper, chromium and Reviewed by: Seung Gu Shin, arsenic) to be similar to naturally occurring levels in unexposed areas. -
Evolution of the Toxins Muscarine and Psilocybin in a Family of Mushroom-Forming Fungi
Evolution of the Toxins Muscarine and Psilocybin in a Family of Mushroom-Forming Fungi Pawel Kosentka1*, Sarah L. Sprague2, Martin Ryberg3, Jochen Gartz4, Amanda L. May5, Shawn R. Campagna5, P. Brandon Matheny3 1 Department of Biochemistry and Cellular and Molecular Biology, University of Tennessee, Knoxville, Tennessee, United States of America, 2 Department of Psychology, University of Tennessee, Knoxville, Tennessee, United States of America, 3 Department of Ecology and Evolutionary Biology, University of Tennessee, Knoxville, Tennessee, United States of America, 4 MITZ Merseburg, Merseburg, Germany, 5 Department of Chemistry, University of Tennessee, Knoxville, Tennessee, United States of America Abstract Mushroom-forming fungi produce a wide array of toxic alkaloids. However, evolutionary analyses aimed at exploring the evolution of muscarine, a toxin that stimulates the parasympathetic nervous system, and psilocybin, a hallucinogen, have never been performed. The known taxonomic distribution of muscarine within the Inocybaceae is limited, based only on assays of species from temperate regions of the northern hemisphere. Here, we present a review of muscarine and psilocybin assays performed on species of Inocybaceae during the last fifty years. To supplement these results, we used liquid chromatography–tandem mass spectrometry (LC–MS/MS) to determine whether muscarine was present in 30 new samples of Inocybaceae, the majority of which have not been previously assayed or that originated from either the tropics or temperate regions of the southern hemisphere. Our main objective is to test the hypothesis that the presence of muscarine is a shared ancestral feature of the Inocybaceae. In addition, we also test whether species of Inocyabceae that produce psilocybin are monophyletic. -
Bibliotheksliste-Aarau-Dezember 2016
Bibliotheksverzeichnis VSVP + Nur im Leesesaal verfügbar, * Dissert. Signatur Autor Titel Jahrgang AKB Myc 1 Ricken Vademecum für Pilzfreunde. 2. Auflage 1920 2 Gramberg Pilze der Heimat 2 Bände 1921 3 Michael Führer für Pilzfreunde, Ausgabe B, 3 Bände 1917 3 b Michael / Schulz Führer für Pilzfreunde. 3 Bände 1927 3 Michael Führer für Pilzfreunde. 3 Bände 1918-1919 4 Dumée Nouvel atlas de poche des champignons. 2 Bände 1921 5 Maublanc Les champignons comestibles et vénéneux. 2 Bände 1926-1927 6 Negri Atlante dei principali funghi comestibili e velenosi 1908 7 Jacottet Les champignons dans la nature 1925 8 Hahn Der Pilzsammler 1903 9 Rolland Atlas des champignons de France, Suisse et Belgique 1910 10 Crawshay The spore ornamentation of the Russulas 1930 11 Cooke Handbook of British fungi. Vol. 1,2. 1871 12/ 1,1 Winter Die Pilze Deutschlands, Oesterreichs und der Schweiz.1. 1884 12/ 1,5 Fischer, E. Die Pilze Deutschlands, Oesterreichs und der Schweiz. Abt. 5 1897 13 Migula Kryptogamenflora von Deutschland, Oesterreich und der Schweiz 1913 14 Secretan Mycographie suisse. 3 vol. 1833 15 Bourdot / Galzin Hymenomycètes de France (doppelt) 1927 16 Bigeard / Guillemin Flore des champignons supérieurs de France. 2 Bände. 1913 17 Wuensche Die Pilze. Anleitung zur Kenntnis derselben 1877 18 Lenz Die nützlichen und schädlichen Schwämme 1840 19 Constantin / Dufour Nouvelle flore des champignons de France 1921 20 Ricken Die Blätterpilze Deutschlands und der angr. Länder. 2 Bände 1915 21 Constantin / Dufour Petite flore des champignons comestibles et vénéneux 1895 22 Quélet Les champignons du Jura et des Vosges. P.1-3+Suppl. -
The Genus Crepidotus (Fr.) Staude in Europe
PERSOON I A Published by Rijksherbarium / Honus 8 01anicus. Leiden Volume 16. Part I. pp. 1-80 ( 1995) THE GENUS CREPIDOTUS (FR.) STAUDE IN EUROPE BEATRICE SENN-IRLET Systematisch-Gcobotanischcs lnsti1u1 dcr Univcrsit!lt Bern. C H-3013 Dern. Switzerland The gcnu~ Crepidotus in Europe is considered. After an examination of 550 collce1ions seven1ccn species and eigh1 varie1ies ore recognized. Two keys ore supplied; all taxa accept ed ore typified. Morphological. ecological and chorological chamc1ers arc cri1ically cvalua1cd. De crip· tivc stotis1ies arc used for basidiospore size. An infrageneric classifica1ion is proposed based on phcnctic rela1ionships using differcn1 cluster methods. The new combinations C. calo lepi.r var. sq11amulos1,s and C. cesatii var. subsplwerosporus arc inlroduced. The spore oma memouon as seen in the scanning electron microscope provides 1hc best character for species dclimilntion and classification. INTRODUCTION Fries ( 1821 : 272) established Agaricus eries De rm illus tribus Crepido111s for more or less pleurotoid species with ferruginous or pale argillaceous spores and an ephemeral. fibrillose veil (!). His fourteen species include such taxa as Paxillus arrorome111osus, Le11ti11el/11s v11/pi11us. Panel/us violaceo-fulvus and £1110/oma deplue11s which nowadays are placed in quite different genera and families. Only three of Fries' species belong to the genu Crepidotus as conceived now. T his demonstrates the importance of microscopic characters, neglected by Fries, for the circumscription of species and genera. Staude ( 1857) raised the tribus Crepidorus to generic rank with C. mollis as the sole species. Hesler & Smith ( 1965) dealt with the history of th e genus Crepido111s in more detail. In recent years several regional floras have been published, e.g. -
Inocybe Cavalcantiae, a New Species from Northern Brazil
Studies in Fungi 5(1): 1–5 (2020) www.studiesinfungi.org ISSN 2465-4973 Article Doi 10.5943/sif/5/1/1 Inocybe cavalcantiae, a new species from northern Brazil Wartchow F Universidade Federal da Paraíba, Departamento de Sistemática e Ecologia, João Pessoa, PB, Brazil ORCID: 0000-0003-4930-565X Wartchow F 2020 – Inocybe cavalcantiae (Inocybaceae), a new species from northern Brazil. Studies in Fungi 5(1), 1–5, Doi 10.5943/sif/5/1/1 This article is dedicated to my beloved ex-advisor Prof. Maria Auxiliadora de Queiroz Cavalcanti, in occasion to her 90th Birthday. Abstract Inocybe cavalcantiae is described based on morphological data from Pernambuco, Northeast Brazil. It is characterized by radially fibrillose/rimose pileus, narrow marginate bulb, nodulose basidiospores, lageniform to clavate metuloids pleurocystidia and versiform metuloids caulocystidia. The species is described, illustrated and compared with morphologically similar species. Key words – Agaricales – Agaricomycetes – Basidiomycota – Neotropic – taxonomy Introduction Inocybe (Fr.) Fr. sensu stricto (=Inocybe clade) is one of the seven clades of a strongly supported monophyletic group, on which they are recognized as the distinct genera Auritella Matheny & Bougher, Inosperma (Kühner) Matheny & Esteve-Rav., Mallocybe (Kuyper) Matheny, Vizzini & Esteve-Rav., Nothocybe Matheny & K.D.P. Latha, Pseudosperma Matheny & Esteve- Rav. and Tubariomyces Esteve-Rav. & Matheny (Latha & Manimohan 2017, Matheny & Bougher 2017, Matheny et al. 2020). Inocybe is recognized by brownish, small to medium sized basidiomes, fibrillose to squamulose pileus, an attached lamellae and brown spore print. This genus is infrequently inventoried in Brazil. Recent list by Wartchow & Sá (2018) reported six well known species viz., I. austrolilacina Wartchow & R.M. -
Historical Biogeography and Diversification of the Cosmopolitan Ectomycorrhizal Mushroom Family Inocybaceae
Out of the Palaeotropics? Historical biogeography and diversification of the cosmopolitan ectomycorrhizal mushroom family Inocybaceae P. Brandon Matheny1*, M. Catherine Aime2, Neale L. Bougher3, Bart Buyck4, Dennis E. Desjardin5, Egon Horak6, Bradley R. Kropp7, D. Jean Lodge8, Kasem Soytong9, James M. Trappe10 and David S. Hibbett11 ABSTRACT Aim The ectomycorrhizal (ECM) mushroom family Inocybaceae is widespread in north temperate regions, but more than 150 species are encountered in the tropics and the Southern Hemisphere. The relative roles of recent and ancient biogeographical processes, relationships with plant hosts, and the timing of divergences that have shaped the current geographic distribution of the family are investigated. location Africa, Australia, Neotropics, New Zealand, north temperate zone, Palaeotropics, Southeast Asia, South America, south temperate zone. Methods We reconstruct a phylogeny of the Inocybaceae with a geological timeline using a relaxed molecular clock. Divergence dates of lineages are estimated statistically to test vicariance-based hypotheses concerning relatedness of disjunct ECM taxa. A series of internal maximum time constraints is used to evaluate two different calibrations. Ancestral state reconstruction is used to infer ancestral areas and ancestral plant partners of the family. Results The Palaeotropics are unique in containing representatives of all major clades of Inocybaceae. Six of the seven major clades diversified initially during the Cretaceous, with subsequent radiations probably during the early Palaeogene. Vicariance patterns cannot be rejected that involve area relationships for Africa- Australia, Africa-India and southern South America-Australia. Northern and southern South America, Australia and New Zealand are primarily the recipients of immigrant taxa during the Palaeogene or later. Angiosperms were the earliest hosts of Inocybaceae. -
Lignicolous Macrofungi in the Beech Forest of the Mountain Ridge Lisets
International Journal of Biological Sciences and Research | IJBSR | Vol. 1, No. 3, p. 131-146, 2018 Lignicolous Macrofungi In The Beech Forest Of The Mountain Ridge Lisets (Forebalkan) in Bulgaria Maria Lacheva Department of Botany and Agrometeorology, Agricultural University-Plovdiv 12, Mendeleev Str., 4000 Plovdiv, Bulgaria, e-mail: [email protected] ABSTRACT The current research is based on lignicolous macrofungi collected from mountain ridge Lisets and its environs between 2004 and 2011. As a result of field and laboratory studies, 73 species were identified. Seven (7) fungi belong to Pezizomycota and 66 to Agaricomycota. Of these fungi 55 represent new records for Forebalkan floristic region. Two (2) species includes in the Red List of fungi in Bulgaria: Clavicorona pyxidata (Pers. : Fr.) Doty, and Phyllotopsis nidulans (Pers. : Fr.) Singer. This paper presents the most up-to-date and extensive list of lignicolous macrofungi of mountain ridge Lisets, Forebalkan floristic region. Key words: beech communities, conservation value, Forebalkan, fungal diversity, lignicolous macrofungi, mountain ridge Lisets, rare taxa Maria Lacheva . GNARW © 2018 Page | 131 https://www.gnarw.com International Journal of Biological Sciences and Research | IJBSR | Vol. 1, No. 3, p. 131-146, 2018 INTRODUCTION The mountain ridge Lisets is situated in Northern Bulgaria, Western Forebalkan (Bondev, 2002). According to the physical and geographical characteristics is situated within the Stara Planina (Balkan) region (Georgiev, 1985; Yordanova et al., 2002). Climatically the mountain ridge belonds to Temperate-continental climatic Zone (Velev, 2002). The highest points is peaks Kamen Lisets (1073 m) and Cherti grad (1283 m). The study area is covered mainly by natural forest due to the prevailing climatic and edaphic conditions and limited timber extraction.