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Systematic Relationships and Biogeography of the Tracheophone Suboscines (Aves: Passeriformes)
MOLECULAR PHYLOGENETICS AND EVOLUTION Molecular Phylogenetics and Evolution 23 (2002) 499–512 www.academicpress.com Systematic relationships and biogeography of the tracheophone suboscines (Aves: Passeriformes) Martin Irestedt,a,b,* Jon Fjeldsaa,c Ulf S. Johansson,a,b and Per G.P. Ericsona a Department of Vertebrate Zoology and Molecular Systematics Laboratory, Swedish Museum of Natural History, P.O. Box 50007, SE-104 05 Stockholm, Sweden b Department of Zoology, University of Stockholm, SE-106 91 Stockholm, Sweden c Zoological Museum, University of Copenhagen, Copenhagen, Denmark Received 29 August 2001; received in revised form 17 January 2002 Abstract Based on their highly specialized ‘‘tracheophone’’ syrinx, the avian families Furnariidae (ovenbirds), Dendrocolaptidae (woodcreepers), Formicariidae (ground antbirds), Thamnophilidae (typical antbirds), Rhinocryptidae (tapaculos), and Conop- ophagidae (gnateaters) have long been recognized to constitute a monophyletic group of suboscine passerines. However, the monophyly of these families have been contested and their interrelationships are poorly understood, and this constrains the pos- sibilities for interpreting adaptive tendencies in this very diverse group. In this study we present a higher-level phylogeny and classification for the tracheophone birds based on phylogenetic analyses of sequence data obtained from 32 ingroup taxa. Both mitochondrial (cytochrome b) and nuclear genes (c-myc, RAG-1, and myoglobin) have been sequenced, and more than 3000 bp were subjected to parsimony and maximum-likelihood analyses. The phylogenetic signals in the mitochondrial and nuclear genes were compared and found to be very similar. The results from the analysis of the combined dataset (all genes, but with transitions at third codon positions in the cytochrome b excluded) partly corroborate previous phylogenetic hypotheses, but several novel arrangements were also suggested. -
Resolving Phylogenetic Relationships Within Passeriformes Based on Mitochondrial Genes and Inferring the Evolution of Their Mitogenomes in Terms of Duplications
GBE Resolving Phylogenetic Relationships within Passeriformes Based on Mitochondrial Genes and Inferring the Evolution of Their Mitogenomes in Terms of Duplications Paweł Mackiewicz1,*, Adam Dawid Urantowka 2, Aleksandra Kroczak1,2, and Dorota Mackiewicz1 1Department of Bioinformatics and Genomics, Faculty of Biotechnology, University of Wrocław, Poland 2Department of Genetics, Wroclaw University of Environmental and Life Sciences, Poland *Corresponding author: E-mail: pamac@smorfland.uni.wroc.pl. Accepted: September 30, 2019 Abstract Mitochondrial genes are placed on one molecule, which implies that they should carry consistent phylogenetic information. Following this advantage, we present a well-supported phylogeny based on mitochondrial genomes from almost 300 representa- tives of Passeriformes, the most numerous and differentiated Aves order. The analyses resolved the phylogenetic position of para- phyletic Basal and Transitional Oscines. Passerida occurred divided into two groups, one containing Paroidea and Sylvioidea, whereas the other, Passeroidea and Muscicapoidea. Analyses of mitogenomes showed four types of rearrangements including a duplicated control region (CR) with adjacent genes. Mapping the presence and absence of duplications onto the phylogenetic tree revealed that the duplication was the ancestral state for passerines and was maintained in early diverged lineages. Next, the duplication could be lost and occurred independently at least four times according to the most parsimonious scenario. In some lineages, two CR copies have been inherited from an ancient duplication and highly diverged, whereas in others, the second copy became similar to the first one due to concerted evolution. The second CR copies accumulated over twice as many substitutions as the first ones. However, the second CRs were not completely eliminated and were retained for a long time, which suggests that both regions can fulfill an important role in mitogenomes. -
Clutch Size in Passerines of Southern South America’
TheCondor96:170-177 8 The Cooper Ornithological Society 1994 CLUTCH SIZE IN PASSERINES OF SOUTHERN SOUTH AMERICA’ YORAM YOM-TOV Department of Zoology, Tel Aviv University,Tel Aviv 69978. Israel MIGUEL I. CHRISTIE AND GUSTAVO J. IGLESIAS Villegas369, 8400 Bariloche,Rio Negro,Argentina Abstract. Clutch size of the passerinesof southern South America was studied by com- paring data taken from the literature for 33 1 species(177 genera), which breed in Chile, Argentina, Uruguay, and southernBrazil. Mean overall clutch size was 2.98 eggs,appreciably smaller than clutch size of passerinesat similar latitudes in the northern hemisphere. There was a highly significantdifference between mean clutch size of the two sub-orders representedin the study area, with the Deutero-Oscineshaving on averagesmaller clutches (2.73) than the Oscines(3.32). This difference between the two sub-orderswas maintained in each of the five zoogeographicalregions of the study area. There were also significant differencesin clutch size between the five main zoogeographicalregions: overall mean clutch size was smallest in the Amazonianregion (2.67) and largestin the Chaco(3.29). Deutero- Oscineseggs were proportionally larger than thoseof Oscines(14% and 11%of bodymass, respectively). Therewas no correlationbetween clutch size and body mass, nor was clutch size related to either nest type or migration. There is no evidence for latitudinal gradient in clutch size in the area studied. Key words: Clutch size; Passeriformes;South America. INTRODUCTION clutch size increasesby as much as one egg per Clutch size varies both between and within spe- 6-10”latitude. Information about the occurrence cies, and the reasons for these variations have of this phenomenon in the southern hemisphere been the subject of many studies. -
Programs and Field Trips
CONTENTS Welcome from Kathy Martin, NAOC-V Conference Chair ………………………….………………..…...…..………………..….…… 2 Conference Organizers & Committees …………………………………………………………………..…...…………..……………….. 3 - 6 NAOC-V General Information ……………………………………………………………………………………………….…..………….. 6 - 11 Registration & Information .. Council & Business Meetings ……………………………………….……………………..……….………………………………………………………………………………………………………………….…………………………………..…..……...….. 11 6 Workshops ……………………….………….……...………………………………………………………………………………..………..………... 12 Symposia ………………………………….……...……………………………………………………………………………………………………..... 13 Abstracts – Online login information …………………………..……...………….………………………………………….……..……... 13 Presentation Guidelines for Oral and Poster Presentations …...………...………………………………………...……….…... 14 Instructions for Session Chairs .. 15 Additional Social & Special Events…………… ……………………………..………………….………...………………………...…………………………………………………..…………………………………………………….……….……... 15 Student Travel Awards …………………………………………..………...……………….………………………………..…...………... 18 - 20 Postdoctoral Travel Awardees …………………………………..………...………………………………..……………………….………... 20 Student Presentation Award Information ……………………...………...……………………………………..……………………..... 20 Function Schedule …………………………………………………………………………………………..……………………..…………. 22 – 26 Sunday, 12 August Tuesday, 14 August .. .. .. 22 Wednesday, 15 August– ………………………………...…… ………………………………………… ……………..... Thursday, 16 August ……………………………………….…………..………………………………………………………………… …... 23 Friday, 17 August ………………………………………….…………...………………………………………………………………………..... 24 Saturday, -
Passerines: Perching Birds
3.9 Orders 9: Passerines – perching birds - Atlas of Birds uncorrected proofs 3.9 Atlas of Birds - Uncorrected proofs Copyrighted Material Passerines: Perching Birds he Passeriformes is by far the largest order of birds, comprising close to 6,000 P Size of order Cardinal virtues Insect-eating voyager Multi-purpose passerine Tspecies. Known loosely as “perching birds”, its members differ from other Number of species in order The Northern or Common Cardinal (Cardinalis cardinalis) The Common Redstart (Phoenicurus phoenicurus) was The Common Magpie (Pica pica) belongs to the crow family orders in various fine anatomical details, and are themselves divided into suborders. Percentage of total bird species belongs to the cardinal family (Cardinalidae) of passerines. once thought to be a member of the thrush family (Corvidae), which includes many of the larger passerines. In simple terms, however, and with a few exceptions, passerines can be described Like the various tanagers, grosbeaks and other members (Turdidae), but is now known to belong to the Old World Like many crows, it is a generalist, with a robust bill adapted of this diverse group, it has a thick, strong bill adapted to flycatchers (Muscicapidae). Its narrow bill is adapted to to feeding on anything from small animals to eggs, carrion, as small birds that sing. feeding on seeds and fruit. Males, from whose vivid red eating insects, and like many insect-eaters that breed in insects, and grain. Crows are among the most intelligent of The word passerine derives from the Latin passer, for sparrow, and indeed a sparrow plumage the family is named, are much more colourful northern Europe and Asia, this species migrates to Sub- birds, and this species is the only non-mammal ever to have is a typical passerine. -
Interspecific Social Dominance Mimicry in Birds
bs_bs_banner Zoological Journal of the Linnean Society, 2014. With 6 figures Interspecific social dominance mimicry in birds RICHARD OWEN PRUM1,2* 1Department of Ecology and Evolutionary Biology, Yale University, New Haven, CT 06520-8150, USA 2Peabody Natural History Museum, Yale University, New Haven, CT 06520-8150, USA Received 3 May 2014; revised 17 June 2014; accepted for publication 21 July 2014 Interspecific social dominance mimicry (ISDM) is a proposed form of social parasitism in which a subordinate species evolves to mimic and deceive a dominant ecological competitor in order to avoid attack by the dominant, model species. The evolutionary plausibility of ISDM has been established previously by the Hairy-Downy game (Prum & Samuelson). Psychophysical models of avian visual acuity support the plausibility of visual ISDM at distances ∼>2–3 m for non-raptorial birds, and ∼>20 m for raptors. Fifty phylogenetically independent examples of avian ISDM involving 60 model and 93 mimic species, subspecies, and morphs from 30 families are proposed and reviewed. Patterns of size differences, phylogeny, and coevolutionary radiation generally support the predic- tions of ISDM. Mimics average 56–58% of the body mass of the proposed model species. Mimics may achieve a large potential deceptive social advantage with <20% reduction in linear body size, which is well within the range of plausible, visual size confusion. Several, multispecies mimicry complexes are proposed (e.g. kiskadee- type flycatchers) which may coevolve through hierarchical variation in the deceptive benefits, similar to Müllerian mimicry. ISDM in birds should be tested further with phylogenetic, ecological, and experimental investigations of convergent similarity in appearance, ecological competition, and aggressive social interactions between sympatric species. -
Aves, Passeriformes)
Genetics and Molecular Biology, 43, 3, e20200018 (2020) Copyright © 2020, Sociedade Brasileira de Genética. DOI: https://doi.org/10.1590/1678-4685-GMB-2020-0018 Short Communication Animal Genetics The molecular cytogenetic characterization of Conopophaga lineata indicates a common chromosome rearrangement in the Parvorder Furnariida (Aves, Passeriformes) Thays Duarte de Oliveira1 , Rafael Kretschmer2 , Natasha Ávila Bertocchi2 , Patricia C.M. O’Brien3, Malcolm A. Ferguson-Smith3, Analía del Valle Garnero4 , Edivaldo Herculano Correa de Oliveira5,6 and Ricardo José Gunski4 1Universidade Federal do Rio Grande do Sul (UFRGS), Programa de Pós-Graduação em Biologia Animal, Porto Alegre, RS, Brazil. 2Universidade Federal do Rio Grande do Sul (UFRGS), Programa de Pós-Graduação em Genética e Biologia Molecular, Porto Alegre, RS, Brazil. 3University of Cambridge, Department of Veterinary Medicine, Cambridge, United Kingdom. 4Universidade Federal do Pampa (UNIPAMPA), Programa de Pós-Graduação em Ciências Biológicas, São Gabriel, RS, Brazil. 5Instituto Evandro Chagas, Seção Meio Ambiente (SAMAM), Ananindeua, PA, Brazil. 6Universidade Federal do Pará, Belém, Instituto de Ciências Exatas e Naturais, Belém, PA, Brazil. Abstract Cytogenetic analyses of the Suboscines species are still scarce, and so far, there is no karyotype description of any species belonging to the family Conopophagidae. Thus, the aim of this study is to describe and analyze the karyotype of Conopophaga lineata by chromosome painting using Gallus gallus (GGA) probes and to identify the lo- cation of the 18/28S rDNA cluster. Metaphases were obtained from fibroblast culture from two individuals of C. lineata. We observed a diploid number of 2n=78. GGA probes showed that most ancestral syntenies are conserved, except for the fission of GGA1 and GGA2, into two distinct pairs each. -
Supplementary Information For
Supplementary Information for Earth history and the passerine superradiation Oliveros, Carl H., Daniel J. Field, Daniel T. Ksepka, F. Keith Barker, Alexandre Aleixo, Michael J. Andersen, Per Alström, Brett W. Benz, Edward L. Braun, Michael J. Braun, Gustavo A. Bravo, Robb T. Brumfield, R. Terry Chesser, Santiago Claramunt, Joel Cracraft, Andrés M. Cuervo, Elizabeth P. Derryberry, Travis C. Glenn, Michael G. Harvey, Peter A. Hosner, Leo Joseph, Rebecca Kimball, Andrew L. Mack, Colin M. Miskelly, A. Townsend Peterson, Mark B. Robbins, Frederick H. Sheldon, Luís Fábio Silveira, Brian T. Smith, Noor D. White, Robert G. Moyle, Brant C. Faircloth Corresponding authors: Carl H. Oliveros, Email: [email protected] Brant C. Faircloth, Email: [email protected] This PDF file includes: Supplementary text Figs. S1 to S10 Table S1 to S3 References for SI reference citations Other supplementary materials for this manuscript include the following: Supplementary Files S1 to S3 1 www.pnas.org/cgi/doi/10.1073/pnas.1813206116 Supplementary Information Text Extended Materials and Methods Library preparation and sequencing. We extracted and purified DNA from fresh muscle tissue, liver tissue, or toepad clips from 113 vouchered museum specimens (Supplementary File S1) using the Qiagen DNeasy Blood and Tissue Kit following the manufacturer’s protocol. We quantified DNA extracts using a Qubit fluorometer, and we prepared aliquots of DNA extracted from muscle and liver at 10 ng/µL in 60 µL volume for shearing. We sheared each DNA sample to 400–600 bp using a Qsonica Q800R sonicator for 15–45 cycles, with each cycle running for 20 seconds on and 20 seconds off at 25% amplitude. -
A Preliminary Study on Population of Some Passeriformes at Marala Head
Journal of Bioresource Management Volume 6 Issue 4 Article 4 A Preliminary Study on Population of Some Passeriformes at Marala Head Zahid Bhatti Center for Bioresource Research (CBR), Islamabad, Pakistan Fakhra Nazir Capital University of Science and Technology, Islamabad, Pakistan, [email protected] Asad Ghufran International Islamic University, Islamabad, Pakistan Follow this and additional works at: https://corescholar.libraries.wright.edu/jbm Part of the Biodiversity Commons, and the Ornithology Commons Recommended Citation Bhatti, Z., Nazir, F., & Ghufran, A. (2019). A Preliminary Study on Population of Some Passeriformes at Marala Head, Journal of Bioresource Management, 6 (4). DOI: https://doi.org/10.35691/JBM.9102.0114 ISSN: 2309-3854 online (Received: Jan 6, 2020; Accepted: Jan 6, 2020; Published: Oct 31, 2019) This Article is brought to you for free and open access by CORE Scholar. It has been accepted for inclusion in Journal of Bioresource Management by an authorized editor of CORE Scholar. For more information, please contact [email protected]. A Preliminary Study on Population of Some Passeriformes at Marala Head © Copyrights of all the papers published in Journal of Bioresource Management are with its publisher, Center for Bioresource Research (CBR) Islamabad, Pakistan. This permits anyone to copy, redistribute, remix, transmit and adapt the work for non-commercial purposes provided the original work and source is appropriately cited. Journal of Bioresource Management does not grant you any other rights in relation to this website or the material on this website. In other words, all other rights are reserved. For the avoidance of doubt, you must not adapt, edit, change, transform, publish, republish, distribute, redistribute, broadcast, rebroadcast or show or play in public this website or the material on this website (in any form or media) without appropriately and conspicuously citing the original work and source or Journal of Bioresource Management’s prior written permission. -
The Incubation Patch in Males of the Suborder Tyranni
218 THE CONDOR . Vol.55 for even superficial examination of some tiger beetles that we collected show that in one species (C&de&r dig&i) the northern and southern populationsare quite distinct. Van Rossem (op. tit.) recordsa total of 82 forms of birds for Tibur6n. We saw but 28 species, six of which, as stated, proved to be new records.A few brief notes on these (new records marked by an asterisk) and on some of the other species,mostly migrants, may be given. Pelecaffus occident&s. Brown Pelican. Extremely abundant. A flock of more than 400 birds was also Presenton a wide gravel bank at the southern end of the Isle de 10sPatos, a small satellite island north of Tiburon. A much larger number was present also on Alcatraz Island, three miles off Kino, where they are said to breed. The Seris considerthe pelican to be good food and until the turn of the century its skin was their only clothing. One of the four Seri clans was named after it. Fregoto magnificens.Man-o ’-war bird. A dozen or so individuals were present‘at the southern end of the island and between this point and Kino Bay on the mainland, but none was seen in the three days at the northern end of the island or in the precedingthree days at Desemhoque. Ardea herodius. Great Blue Heron. Three to four individuals. Egretta thzrla. Snowy Egret. Six to eight individuals. Florid0 coerzdea.Little Blue Heron. One adult. All the herons were observedfeeding on the flats in or near the tidal marsh at Tecomate. -
Fifty-Second Supplfmfnt to the American Ornithologists' Union Check-List of North American Birds
We/lM/t 128(3):500-613, 2011 © The American Ornithologists' Union, 2011. Printed in USA. FIFTY-SECOND SUPPLFMFNT TO THE AMERICAN ORNITHOLOGISTS' UNION CHECK-LIST OF NORTH AMERICAN BIRDS R. TERRY CHESSER,^'^2,I3 RICHARD C. BANKS,^ F. KEITH BARKER,^ CARLA CICERO,^ JON L. DUNN,'* ANDREW W. KRATTER,^ IRBY J. LOVETTE,^ PAMELA C. RASMUSSEN,^ J. V. REMSEN, JR.,"^ JAMES D. RISING,^ DOUGLAS F. STOTZ,^"^ AND KEVIN WINKER" 'i/.S. Geological Survey, Patuxent Wildlife Research Center, National Museum of Natural History, MRC-IU, P.O. Box 37012, Washington, D.C. 20013, USA; ''•Bell Museum of Natural History, 10 Church Street, University of Minnesota, Minneapolis, Minnesota SS4S5, USA; ^Museum of Vertebrate Zooiogy, 3101 Valley Life Sciences Building, University of California, Berkeley, California 94720, USA; "52 Nevada Street, Bishop, California 93514, USA; '^Florida Museum of Natural History, P.O. Box 117800, University of Florida, Gainesviile, Florida 32611, USA; ^Cornell Laboratory of Ornithoiogy, 159 Sapsucker Woods Road, Ithaca, New York 14850, USA; ''Michigan State University Museum and Department ofZooiogy, West Circle Drive, East Lansing, Michigan 48824, USA; ^Museum of Naturai Science, Louisiana State University, Foster Hall 119, Baton Rouge, Louisiana 70803, USA; ^Department of Ecology and Evolutionary Biology, Ramsay Wright Zoological Labs, University of Toronto, Toronto, Ontario M5S 3G5, Canada; ^^Environment, Culture and Conservation, Field Museum of Natural History, 1400 S. Lake Shore Drive, Chicago, Illinois 60605, USA; and ^''University of Alaska Museum, 907 Yukon Drive, Fairbanks, Aiaska 99775, USA This is the 11th supplement since publication of the seventh (Chrysomus icterocephalus) is changed; (9) the English name of one edition of the Check-list of North American Birds (American Or- species (Aphelocoma ultramarina) is modified as a result of a taxo- nithologists' Union [AOU] 1998). -
Proposals 2018-C
AOS Classification Committee – North and Middle America Proposal Set 2018-C 1 March 2018 No. Page Title 01 02 Adopt (a) a revised linear sequence and (b) a subfamily classification for the Accipitridae 02 10 Split Yellow Warbler (Setophaga petechia) into two species 03 25 Revise the classification and linear sequence of the Tyrannoidea (with amendment) 04 39 Split Cory's Shearwater (Calonectris diomedea) into two species 05 42 Split Puffinus boydi from Audubon’s Shearwater P. lherminieri 06 48 (a) Split extralimital Gracula indica from Hill Myna G. religiosa and (b) move G. religiosa from the main list to Appendix 1 07 51 Split Melozone occipitalis from White-eared Ground-Sparrow M. leucotis 08 61 Split White-collared Seedeater (Sporophila torqueola) into two species (with amendment) 09 72 Lump Taiga Bean-Goose Anser fabalis and Tundra Bean-Goose A. serrirostris 10 78 Recognize Mexican Duck Anas diazi as a species 11 87 Transfer Loxigilla portoricensis and L. violacea to Melopyrrha 12 90 Split Gray Nightjar Caprimulgus indicus into three species, recognizing (a) C. jotaka and (b) C. phalaena 13 93 Split Barn Owl (Tyto alba) into three species 14 99 Split LeConte’s Thrasher (Toxostoma lecontei) into two species 15 105 Revise generic assignments of New World “grassland” sparrows 1 2018-C-1 N&MA Classification Committee pp. 87-105 Adopt (a) a revised linear sequence and (b) a subfamily classification for the Accipitridae Background: Our current linear sequence of the Accipitridae, which places all the kites at the beginning, followed by the harpy and sea eagles, accipiters and harriers, buteonines, and finally the booted eagles, follows the revised Peters classification of the group (Stresemann and Amadon 1979).