Checklist and Bibliography of the Marine Benthic Algae from the Marshall Islands
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Supplementary Materials: Figure S1
1 Supplementary materials: Figure S1. Coral reef in Xiaodong Hai locality: (A) The southern part of the locality; (B) Reef slope; (C) Reef-flat, the upper subtidal zone; (D) Reef-flat, the lower intertidal zone. Figure S2. Algal communities in Xiaodong Hai at different seasons of 2016–2019: (A) Community of colonial blue-green algae, transect 1, the splash zone, the dry season of 2019; (B) Monodominant community of the red crust alga Hildenbrandia rubra, transect 3, upper intertidal, the rainy season of 2016; (C) Monodominant community of the red alga Gelidiella bornetii, transect 3, upper intertidal, the rainy season of 2018; (D) Bidominant community of the red alga Laurencia decumbens and the green Ulva clathrata, transect 3, middle intertidal, the dry season of 2019; (E) Polydominant community of algal turf with the mosaic dominance of red algae Tolypiocladia glomerulata (inset a), Palisada papillosa (center), and Centroceras clavulatum (inset b), transect 2, middle intertidal, the dry season of 2019; (F) Polydominant community of algal turf with the mosaic dominance of the red alga Hypnea pannosa and green Caulerpa chemnitzia, transect 1, lower intertidal, the dry season of 2016; (G) Polydominant community of algal turf with the mosaic dominance of brown algae Padina australis (inset a) and Hydroclathrus clathratus (inset b), the red alga Acanthophora spicifera (inset c) and the green alga Caulerpa chemnitzia, transect 1, lower intertidal, the dry season of 2019; (H) Sargassum spp. belt, transect 1, upper subtidal, the dry season of 2016. 2 3 Table S1. List of the seaweeds of Xiaodong Hai in 2016-2019. The abundance of taxa: rare sightings (+); common (++); abundant (+++). -
Neoproterozoic Origin and Multiple Transitions to Macroscopic Growth in Green Seaweeds
Neoproterozoic origin and multiple transitions to macroscopic growth in green seaweeds Andrea Del Cortonaa,b,c,d,1, Christopher J. Jacksone, François Bucchinib,c, Michiel Van Belb,c, Sofie D’hondta, f g h i,j,k e Pavel Skaloud , Charles F. Delwiche , Andrew H. Knoll , John A. Raven , Heroen Verbruggen , Klaas Vandepoeleb,c,d,1,2, Olivier De Clercka,1,2, and Frederik Leliaerta,l,1,2 aDepartment of Biology, Phycology Research Group, Ghent University, 9000 Ghent, Belgium; bDepartment of Plant Biotechnology and Bioinformatics, Ghent University, 9052 Zwijnaarde, Belgium; cVlaams Instituut voor Biotechnologie Center for Plant Systems Biology, 9052 Zwijnaarde, Belgium; dBioinformatics Institute Ghent, Ghent University, 9052 Zwijnaarde, Belgium; eSchool of Biosciences, University of Melbourne, Melbourne, VIC 3010, Australia; fDepartment of Botany, Faculty of Science, Charles University, CZ-12800 Prague 2, Czech Republic; gDepartment of Cell Biology and Molecular Genetics, University of Maryland, College Park, MD 20742; hDepartment of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA 02138; iDivision of Plant Sciences, University of Dundee at the James Hutton Institute, Dundee DD2 5DA, United Kingdom; jSchool of Biological Sciences, University of Western Australia, WA 6009, Australia; kClimate Change Cluster, University of Technology, Ultimo, NSW 2006, Australia; and lMeise Botanic Garden, 1860 Meise, Belgium Edited by Pamela S. Soltis, University of Florida, Gainesville, FL, and approved December 13, 2019 (received for review June 11, 2019) The Neoproterozoic Era records the transition from a largely clear interpretation of how many times and when green seaweeds bacterial to a predominantly eukaryotic phototrophic world, creat- emerged from unicellular ancestors (8). ing the foundation for the complex benthic ecosystems that have There is general consensus that an early split in the evolution sustained Metazoa from the Ediacaran Period onward. -
The Identification of Functional, Sequestered, Symbiotic Chloroplasts
University of South Florida Scholar Commons Graduate Theses and Dissertations Graduate School 2006 The identification of functional, sequestered, symbiotic chloroplasts in Elysia clarki: A crucial step in the study of horizontally transferred, nuclear algal genes Nicholas E. Curtis University of South Florida Follow this and additional works at: http://scholarcommons.usf.edu/etd Part of the American Studies Commons Scholar Commons Citation Curtis, Nicholas E., "The identification of functional, sequestered, symbiotic chloroplasts in Elysia clarki: A crucial step in the study of horizontally transferred, nuclear algal genes" (2006). Graduate Theses and Dissertations. http://scholarcommons.usf.edu/etd/2496 This Dissertation is brought to you for free and open access by the Graduate School at Scholar Commons. It has been accepted for inclusion in Graduate Theses and Dissertations by an authorized administrator of Scholar Commons. For more information, please contact [email protected]. The Identification of Functional, Sequestered, Symbiotic Chloroplasts in Elysia clarki: A Crucial Step in the Study of Horizontally Transferred, Nuclear Algal Genes by Nicholas E. Curtis A thesis submitted in partial fulfillment of the requirements for the degree of Doctor of Philosophy Department of Biology College of Arts and Sciences University of South Florida Major Professor: Sidney K. Pierce, Jr., Ph.D. Clinton J. Dawes, Ph.D. Kathleen M. Scott, Ph.D. Brian T. Livingston, Ph.D. Date of Approval: June 15, 2006 Keywords: Bryopsidales, kleptoplasty, sacoglossan, rbcL, chloroplast symbiosis Penicillus, Halimeda, Bryopsis, Derbesia © Copyright 2006, Nicholas E. Curtis Note to Reader The original of this document contains color that is necessary for understanding the data. The original dissertation is on file with the USF library in Tampa, Florida. -
New Records of Marine Algae from the Philippines
Micronesica 23(2): 181-190, 1990 New Records of Marine Algae From the Philippines J o h n A. W e s t and H i l c o n i d aP. Calumpong 1 Department of Plant Biology, University of California Berkeley, CA. U.S.A. 94720 Abstract— Five species of marine algae,Acrothamnion preissii (Sonder) Wollaston (Rhodo phyceae, Ceramiales),Caulacanthus ustulatus (Mert.) Kiitz. (Rhodophyceae, Gigartinales), Ochrosphaera verrucosa Schussnig (Prymnesiophyceae, Coccosphaerales),Ostreobium quekettii Bomet et Flahault (Chlorophyceae, Bryopsidales), Rhodosorusand marinus Geitler (Rhodo phyceae, Porphyridiales) are recorded for the first time in the Philippines. The sporophytic stage of Derbesia marina (Lyngbye) Solier is also reported.Caulacanthus indicus Weber-van Bosse and C. okamurae Yamada are synonymized withC. ustulatus based on morphological and anatomical com parisons of type material with field and culture specimens and successful cross-breeding o f Philip pine and Australian isolates in culture. Introduction In 1987 and 1988 the authors collected benthic marine algae on several islands in the Philippines. Among the collections of benthic marine algae from these areas were several specimens of unreported species. The plants were collected by hand, from different depths and habitats as indicated. Part of these collections were placed in culture following the methods of West & Calumpong (1988). Sections were made by hand with razor blades. Squash sections were made by first softening the tissue with saturated chloral hydrate so lution for 2-5 minutes. These sections were then stained with 0.4% aniline blue-black in 0. l%"acetic acid (5% formalin was added to prevent fungal growth in the mounting me dium) and mounted in 50% KaroR syrup. -
Marine Macroalgal Biodiversity of Northern Madagascar: Morpho‑Genetic Systematics and Implications of Anthropic Impacts for Conservation
Biodiversity and Conservation https://doi.org/10.1007/s10531-021-02156-0 ORIGINAL PAPER Marine macroalgal biodiversity of northern Madagascar: morpho‑genetic systematics and implications of anthropic impacts for conservation Christophe Vieira1,2 · Antoine De Ramon N’Yeurt3 · Faravavy A. Rasoamanendrika4 · Sofe D’Hondt2 · Lan‑Anh Thi Tran2,5 · Didier Van den Spiegel6 · Hiroshi Kawai1 · Olivier De Clerck2 Received: 24 September 2020 / Revised: 29 January 2021 / Accepted: 9 March 2021 © The Author(s), under exclusive licence to Springer Nature B.V. 2021 Abstract A foristic survey of the marine algal biodiversity of Antsiranana Bay, northern Madagas- car, was conducted during November 2018. This represents the frst inventory encompass- ing the three major macroalgal classes (Phaeophyceae, Florideophyceae and Ulvophyceae) for the little-known Malagasy marine fora. Combining morphological and DNA-based approaches, we report from our collection a total of 110 species from northern Madagas- car, including 30 species of Phaeophyceae, 50 Florideophyceae and 30 Ulvophyceae. Bar- coding of the chloroplast-encoded rbcL gene was used for the three algal classes, in addi- tion to tufA for the Ulvophyceae. This study signifcantly increases our knowledge of the Malagasy marine biodiversity while augmenting the rbcL and tufA algal reference libraries for DNA barcoding. These eforts resulted in a total of 72 new species records for Mada- gascar. Combining our own data with the literature, we also provide an updated catalogue of 442 taxa of marine benthic -
Meta-Transcriptomic Detection of Diverse and Divergent RNA Viruses
bioRxiv preprint doi: https://doi.org/10.1101/2020.06.08.141184; this version posted June 8, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. 1 Meta-transcriptomic detection of diverse and divergent 2 RNA viruses in green and chlorarachniophyte algae 3 4 5 Justine Charon1, Vanessa Rossetto Marcelino1,2, Richard Wetherbee3, Heroen Verbruggen3, 6 Edward C. Holmes1* 7 8 9 1Marie Bashir Institute for Infectious Diseases and Biosecurity, School of Life and 10 Environmental Sciences and School of Medical Sciences, The University of Sydney, 11 Sydney, Australia. 12 2Centre for Infectious Diseases and Microbiology, Westmead Institute for Medical 13 Research, Westmead, NSW 2145, Australia. 14 3School of BioSciences, University of Melbourne, VIC 3010, Australia. 15 16 17 *Corresponding author: 18 Marie Bashir Institute for Infectious Diseases and Biosecurity, School of Life and 19 Environmental Sciences and School of Medical Sciences, 20 The University of Sydney, 21 Sydney, NSW 2006, Australia. 22 Tel: +61 2 9351 5591 23 Email: [email protected] 1 bioRxiv preprint doi: https://doi.org/10.1101/2020.06.08.141184; this version posted June 8, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. -
Tsuda RT. 2002. Checklist of the Marine Benthic Algae from the Palau Archipelago Based on Past
Checklist of the Marine Benthic Algae from the Palau Archipelago Based on Past References Roy T. Tsuda Marine Laboratory, University of Guam, UOG Station, Mangilao, Guam 96923 P.O. Box 7086, Koror, Republic of Palau 96940 PICRC Publication 02-019 September 2002 TABLE OF CONTENTS Page Introduction 1 Division Cyanophyta 3 Class Cyanophyceae Order Chroococcales 3 Family Entophysalidaceae Family Microcystaceae Order Oscillatoriales 3 Family Oscillatoriaceae Family Phormidiaceae Family Schizothrichaceae Order Nostocales 4 Family Microchaetaceae Family Nostocaceae Family Rivulariaceae Order Stigonematales 4 Family Mastigocladaceae Division Chlorophyta 5 Class Chlorophyceae Order Ulvales 5 Family Ulvaceae Order Cladophorales 5 Family Anadyomenaceae Family Cladophoraceae Family Siphonocladaceae Family Valoniaceae Order Bryopsidales 6 Family Bryopsidaceae Family Caulerpaceae Family Codiaceae ii Page Family Halimedaceae Family Udoteaceae Order Dasycladales 9 Family Dasycladaceae Division Phaeophyta 9 Class Phaeophyceae Order Ectocarpales 9 Family Ectocarpaceae Family Ralfsiaceae Order Sphacelariales 10 Family Sphacelariaceae Order Dictyotales 10 Family Dictyotaceae Order Scytosiphonales 11 Family Scytosiphonaceae Order Fucales 11 Family Sargassaceae Division Rhodophyta 11 Class Rhodophyceae Subclass Bangiophycidae 11 Order Erythropeltidales 11 Family Erythrotrichiaceae Subclass Florideophycidae 12 Order Acrochaetiales 12 Family Acrochaetiaceae Order Nemaliales 12 Family Galaxauraceae Family Liagoraceae iii Page Order Gelidiales 12 Family GelidiaceaeFamily -
Molecular Phylogeny of the Cladophoraceae (Cladophorales
J. Phycol. *, ***–*** (2016) © 2016 Phycological Society of America DOI: 10.1111/jpy.12457 MOLECULAR PHYLOGENY OF THE CLADOPHORACEAE (CLADOPHORALES, € ULVOPHYCEAE), WITH THE RESURRECTION OF ACROCLADUS NAGELI AND WILLEELLA BØRGESEN, AND THE DESCRIPTION OF LUBRICA GEN. NOV. AND PSEUDORHIZOCLONIUM GEN. NOV.1 Christian Boedeker2 School of Biological Sciences, Victoria University of Wellington, Kelburn Parade, Wellington 6140, New Zealand Frederik Leliaert Phycology Research Group, Biology Department, Ghent University, Krijgslaan 281 S8, 9000 Ghent, Belgium and Giuseppe C. Zuccarello School of Biological Sciences, Victoria University of Wellington, Kelburn Parade, Wellington 6140, New Zealand The taxonomy of the Cladophoraceae, a large ribosomal DNA; s. l., sensu lato; s. s., sensu stricto; family of filamentous green algae, has been SSU, small ribosomal subunit problematic for a long time due to morphological simplicity, parallel evolution, phenotypic plasticity, and unknown distribution ranges. Partial large subunit The Cladophorales (Ulvophyceae, Chlorophyta) is (LSU) rDNA sequences were generated for 362 a large group of essentially filamentous green algae, isolates, and the analyses of a concatenated dataset and contains several hundred species that occur in consisting of unique LSU and small subunit (SSU) almost all types of aquatic habitats across the globe. rDNA sequences of 95 specimens greatly clarified the Species of Cladophorales have rather simple mor- phylogeny of the Cladophoraceae. The phylogenetic phologies, ranging from branched -
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Memoirs of the National Museum of Victoria 12 April 1971 Port Phillip Bay Survey 2 https://doi.org/10.24199/j.mmv.1971.32.08 8 INTERTIDAL ECOLOGY OF PORT PHILLIP BAY WITH SYSTEMATIC LIST OF PLANTS AND ANIMALS By R. J. KING,* J. HOPE BLACKt and SOPHIE c. DUCKER* Abstract The zonation is recorded at 14 stations within Port Phillip Bay. Any special features of a station arc di�cusscd in �elation to the adjacent stations and the whole Bay. The intertidal plants and ammals are listed systematically with references, distribution within the Bay and relevant comment. 1. INTERTIDAL ECOLOGY South-western Bay-Areas 42, 49, 50 By R. J. KING and J. HOPE BLACK Arca 42: Station 21 St. Leonards 16 Oct. 69 Introduction Arca 49: Station 4 Swan Bay Jetty, 17 Sept. 69 This account is basically coneerncd with the distribution of intertidal plants and animals of Eastern Bay-Areas 23-24, 35-36, 47-48, 55 Port Phillip Bay. The benthic flora and fauna Arca 23, Station 20, Ricketts Pt., 30 Sept. 69 have been dealt with in separate papers (Mem Area 55: Station 15 Schnapper Pt. 25 May oir 27 and present volume). 70 Following preliminary investigations, 14 Area 55: Station 13 Fossil Beach 25 May stations were selected for detailed study in such 70 a way that all regions and all major geological formations were represented. These localities Southern Bay-Areas 60-64, 67-70 are listed below and are shown in Figure 1. Arca 63: Station 24 Martha Pt. 25 May 70 For ease of comparison with Womersley Port Phillip Heads-Areas 58-59 (1966), in his paper on the subtidal algae, the Area 58: Station 10 Quecnscliff, 12 Mar. -
An Annotated List of Marine Chlorophyta from the Pacific Coast of the Republic of Panama with a Comparison to Caribbean Panama Species
Nova Hedwigia 78 1•2 209•241 Stuttgart, February 2004 An annotated list of marine Chlorophyta from the Pacific Coast of the Republic of Panama with a comparison to Caribbean Panama species by Brian Wysor The University of Louisiana at Lafayette, Department of Biology PO Box 42451, Lafayette, LA 70504-2451, USA. Present address: Bigelow Laboratory for Ocean Sciences PO Box 475, McKown Point, West Boothbay Harbor, ME 04575, USA. With 21 figures, 3 tables and 1 appendix Wysor, B. (2004): An annotated list of marine Chlorophytafrom the Pacific Coast of the Republic of Panama with a comparison to Caribbean Panama species. - Nova Hedwigia 78: 209-241. Abstract: Recent study of marine macroalgal diversity of the Republic of Panama has led to a substantial increase in the number of seaweed species documented for the country. In this updated list of marine algae based on collections made in 1999 and reports from the literature, 44 Chlorophyta (43 species and one variety) are documented for the Pacific coast of Panama, including 27 new records. A comparison of chlorophyte diversity along Caribbean and Pacific coasts revealed greater diversity at nearly all taxonomic levels in the Caribbean flora. Differences in environmentalregime (e.g., absence of sea grasses, lower abundance and diversity of hermatypic corals, and greater tidal range along the Pacific coast) explained some of the discrepancy in diversity across the isthmus. Fifteen taxa were common to Caribbean and Pacific coasts, but the number of amphi-isthmian taxa nearly doubled when taxa from nearby floras were includedin the estimate. These taxa may represent daughter populations of a formerly contiguouspopulation that was severed by the emerging Central American Isthmus. -
Reassessment of the Classification of Bryopsidales (Chlorophyta) Based on T Chloroplast Phylogenomic Analyses ⁎ Ma
Molecular Phylogenetics and Evolution 130 (2019) 397–405 Contents lists available at ScienceDirect Molecular Phylogenetics and Evolution journal homepage: www.elsevier.com/locate/ympev Reassessment of the classification of Bryopsidales (Chlorophyta) based on T chloroplast phylogenomic analyses ⁎ Ma. Chiela M. Cremena, , Frederik Leliaertb,c, John Westa, Daryl W. Lamd, Satoshi Shimadae, Juan M. Lopez-Bautistad, Heroen Verbruggena a School of BioSciences, University of Melbourne, Parkville, 3010 Victoria, Australia b Botanic Garden Meise, 1860 Meise, Belgium c Department of Biology, Phycology Research Group, Ghent University, 9000 Ghent, Belgium d Department of Biological Sciences, The University of Alabama, 35487 AL, USA e Faculty of Core Research, Natural Science Division, Ochanomizu University, 2-1-1 Otsuka, Bunkyo, Tokyo 112-8610, Japan ARTICLE INFO ABSTRACT Keywords: The Bryopsidales is a morphologically diverse group of mainly marine green macroalgae characterized by a Siphonous green algae siphonous structure. The order is composed of three suborders – Ostreobineae, Bryopsidineae, and Seaweeds Halimedineae. While previous studies improved the higher-level classification of the order, the taxonomic Chloroplast genome placement of some genera in Bryopsidineae (Pseudobryopsis and Lambia) as well as the relationships between the Phylogeny families of Halimedineae remains uncertain. In this study, we re-assess the phylogeny of the order with datasets Ulvophyceae derived from chloroplast genomes, drastically increasing the taxon sampling by sequencing 32 new chloroplast genomes. The phylogenies presented here provided good support for the major lineages (suborders and most families) in Bryopsidales. In Bryopsidineae, Pseudobryopsis hainanensis was inferred as a distinct lineage from the three established families allowing us to establish the family Pseudobryopsidaceae. The Antarctic species Lambia antarctica was shown to be an early-branching lineage in the family Bryopsidaceae. -
The Marine Macroalgae of Cabo Verde Archipelago: an Updated Checklist
Arquipelago - Life and Marine Sciences ISSN: 0873-4704 The marine macroalgae of Cabo Verde archipelago: an updated checklist DANIELA GABRIEL AND SUZANNE FREDERICQ Gabriel, D. and S. Fredericq 2019. The marine macroalgae of Cabo Verde archipelago: an updated checklist. Arquipelago. Life and Marine Sciences 36: 39 - 60. An updated list of the names of the marine macroalgae of Cabo Verde, an archipelago of ten volcanic islands in the central Atlantic Ocean, is presented based on existing reports, and includes the addition of 36 species. The checklist comprises a total of 372 species names, of which 68 are brown algae (Ochrophyta), 238 are red algae (Rhodophyta) and 66 green algae (Chlorophyta). New distribution records reveal the existence of 10 putative endemic species for Cabo Verde islands, nine species that are geographically restricted to the Macaronesia, five species that are restricted to Cabo Verde islands and the nearby Tropical Western African coast, and five species known to occur only in the Maraconesian Islands and Tropical West Africa. Two species, previously considered invalid names, are here validly published as Colaconema naumannii comb. nov. and Sebdenia canariensis sp. nov. Key words: Cabo Verde islands, Macaronesia, Marine flora, Seaweeds, Tropical West Africa. Daniela Gabriel1 (e-mail: [email protected]) and S. Fredericq2, 1CIBIO - Research Centre in Biodiversity and Genetic Resources, 1InBIO - Research Network in Biodiversity and Evolutionary Biology, University of the Azores, Biology Department, 9501-801 Ponta Delgada, Azores, Portugal. 2Department of Biology, University of Louisiana at Lafayette, Lafayette, Louisiana 70504-3602, USA. INTRODUCTION Schmitt 1995), with the most recent checklist for the archipelago published in 2005 by The Republic of Cabo Verde is an archipelago Prud’homme van Reine et al.