Phylogeny of the Cladophorophyceae (Chlorophyta) Inferred from Partial LSU Rrna Gene Sequences: Is the Recognition of a Separate Order Siphonocladales Justified?
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Supplementary Materials: Figure S1
1 Supplementary materials: Figure S1. Coral reef in Xiaodong Hai locality: (A) The southern part of the locality; (B) Reef slope; (C) Reef-flat, the upper subtidal zone; (D) Reef-flat, the lower intertidal zone. Figure S2. Algal communities in Xiaodong Hai at different seasons of 2016–2019: (A) Community of colonial blue-green algae, transect 1, the splash zone, the dry season of 2019; (B) Monodominant community of the red crust alga Hildenbrandia rubra, transect 3, upper intertidal, the rainy season of 2016; (C) Monodominant community of the red alga Gelidiella bornetii, transect 3, upper intertidal, the rainy season of 2018; (D) Bidominant community of the red alga Laurencia decumbens and the green Ulva clathrata, transect 3, middle intertidal, the dry season of 2019; (E) Polydominant community of algal turf with the mosaic dominance of red algae Tolypiocladia glomerulata (inset a), Palisada papillosa (center), and Centroceras clavulatum (inset b), transect 2, middle intertidal, the dry season of 2019; (F) Polydominant community of algal turf with the mosaic dominance of the red alga Hypnea pannosa and green Caulerpa chemnitzia, transect 1, lower intertidal, the dry season of 2016; (G) Polydominant community of algal turf with the mosaic dominance of brown algae Padina australis (inset a) and Hydroclathrus clathratus (inset b), the red alga Acanthophora spicifera (inset c) and the green alga Caulerpa chemnitzia, transect 1, lower intertidal, the dry season of 2019; (H) Sargassum spp. belt, transect 1, upper subtidal, the dry season of 2016. 2 3 Table S1. List of the seaweeds of Xiaodong Hai in 2016-2019. The abundance of taxa: rare sightings (+); common (++); abundant (+++). -
Frontiers in Zoology Biomed Central
Frontiers in Zoology BioMed Central Research Open Access Functional chloroplasts in metazoan cells - a unique evolutionary strategy in animal life Katharina Händeler*1, Yvonne P Grzymbowski1, Patrick J Krug2 and Heike Wägele1 Address: 1Zoologisches Forschungsmuseum Alexander Koenig, Adenauerallee 160, 53113 Bonn, Germany and 2Department of Biological Sciences, California State University, Los Angeles, California, 90032-8201, USA Email: Katharina Händeler* - [email protected]; Yvonne P Grzymbowski - [email protected]; Patrick J Krug - [email protected]; Heike Wägele - [email protected] * Corresponding author Published: 1 December 2009 Received: 26 June 2009 Accepted: 1 December 2009 Frontiers in Zoology 2009, 6:28 doi:10.1186/1742-9994-6-28 This article is available from: http://www.frontiersinzoology.com/content/6/1/28 © 2009 Händeler et al; licensee BioMed Central Ltd. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. Abstract Background: Among metazoans, retention of functional diet-derived chloroplasts (kleptoplasty) is known only from the sea slug taxon Sacoglossa (Gastropoda: Opisthobranchia). Intracellular maintenance of plastids in the slug's digestive epithelium has long attracted interest given its implications for understanding the evolution of endosymbiosis. However, photosynthetic ability varies widely among sacoglossans; some species have no plastid retention while others survive for months solely on photosynthesis. We present a molecular phylogenetic hypothesis for the Sacoglossa and a survey of kleptoplasty from representatives of all major clades. We sought to quantify variation in photosynthetic ability among lineages, identify phylogenetic origins of plastid retention, and assess whether kleptoplasty was a key character in the radiation of the Sacoglossa. -
Phylogenetic Analysis of Rhizoclonium (Cladophoraceae, Cladophorales), and the Description of Rhizoclonium Subtile Sp
Phytotaxa 383 (2): 147–164 ISSN 1179-3155 (print edition) http://www.mapress.com/j/pt/ PHYTOTAXA Copyright © 2018 Magnolia Press Article ISSN 1179-3163 (online edition) https://doi.org/10.11646/phytotaxa.383.2.2 Phylogenetic analysis of Rhizoclonium (Cladophoraceae, Cladophorales), and the description of Rhizoclonium subtile sp. nov. from China ZHI-JUAN ZHAO1,2, HUAN ZHU3, GUO-XIANG LIU3* & ZHENG-YU HU4 1Key Laboratory of Environment Change and Resources Use in Beibu Gulf (Guangxi Teachers Education University), Ministry of Education, Nanning, 530001, P. R. China 2 Guangxi Key Laboratory of Earth Surface Processes and Intelligent Simulation (Guangxi Teachers Education University), Nanning, 530001, P. R. China 3Key Laboratory of Algal Biology, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan 430072, P. R. China 4State Key Laboratory of Freshwater Ecology and Biotechnology, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan 430072, P. R. China *e-mail:[email protected] Abstract The genus Rhizoclonium (Cladophoraceae, Cladophorales) accommodates uniserial, unbranched filamentous algae, closely related to Cladophora and Chaetomorpha. Its taxonomy has been problematic for a long time due to the lack of diagnostic morphological characters. To clarify the species diversity and taxonomic relationships of this genus, we collected and analyzed thirteen freshwater Rhizoclonium specimens from China. The morphological traits of these specimens were observed and described in detail. Three nuclear gene markers small subunit ribosomal DNA (SSU), large subunit ribosomal DNA (LSU) and internal transcribed spacer 2 (ITS2) sequences were analyzed to elucidate their phylogenetic relationships. The results revealed that there were at least fifteen molecular species assignable to Rhizoclonium and our thirteen specimens were distributed in four clades. -
Neoproterozoic Origin and Multiple Transitions to Macroscopic Growth in Green Seaweeds
Neoproterozoic origin and multiple transitions to macroscopic growth in green seaweeds Andrea Del Cortonaa,b,c,d,1, Christopher J. Jacksone, François Bucchinib,c, Michiel Van Belb,c, Sofie D’hondta, f g h i,j,k e Pavel Skaloud , Charles F. Delwiche , Andrew H. Knoll , John A. Raven , Heroen Verbruggen , Klaas Vandepoeleb,c,d,1,2, Olivier De Clercka,1,2, and Frederik Leliaerta,l,1,2 aDepartment of Biology, Phycology Research Group, Ghent University, 9000 Ghent, Belgium; bDepartment of Plant Biotechnology and Bioinformatics, Ghent University, 9052 Zwijnaarde, Belgium; cVlaams Instituut voor Biotechnologie Center for Plant Systems Biology, 9052 Zwijnaarde, Belgium; dBioinformatics Institute Ghent, Ghent University, 9052 Zwijnaarde, Belgium; eSchool of Biosciences, University of Melbourne, Melbourne, VIC 3010, Australia; fDepartment of Botany, Faculty of Science, Charles University, CZ-12800 Prague 2, Czech Republic; gDepartment of Cell Biology and Molecular Genetics, University of Maryland, College Park, MD 20742; hDepartment of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA 02138; iDivision of Plant Sciences, University of Dundee at the James Hutton Institute, Dundee DD2 5DA, United Kingdom; jSchool of Biological Sciences, University of Western Australia, WA 6009, Australia; kClimate Change Cluster, University of Technology, Ultimo, NSW 2006, Australia; and lMeise Botanic Garden, 1860 Meise, Belgium Edited by Pamela S. Soltis, University of Florida, Gainesville, FL, and approved December 13, 2019 (received for review June 11, 2019) The Neoproterozoic Era records the transition from a largely clear interpretation of how many times and when green seaweeds bacterial to a predominantly eukaryotic phototrophic world, creat- emerged from unicellular ancestors (8). ing the foundation for the complex benthic ecosystems that have There is general consensus that an early split in the evolution sustained Metazoa from the Ediacaran Period onward. -
Marine Algae of French Frigate Shoals, Northwestern Hawaiian Islands: Species List and Biogeographic Comparisons1
Marine Algae of French Frigate Shoals, Northwestern Hawaiian Islands: Species List and Biogeographic Comparisons1 Peter S. Vroom,2 Kimberly N. Page,2,3 Kimberly A. Peyton,3 and J. Kanekoa Kukea-Shultz3 Abstract: French Frigate Shoals represents a relatively unpolluted tropical Pa- cific atoll system with algal assemblages minimally impacted by anthropogenic activities. This study qualitatively assessed algal assemblages at 57 sites, thereby increasing the number of algal species known from French Frigate Shoals by over 380% with 132 new records reported, four being species new to the Ha- waiian Archipelago, Bryopsis indica, Gracilaria millardetii, Halimeda distorta, and an unidentified species of Laurencia. Cheney ratios reveal a truly tropical flora, despite the subtropical latitudes spanned by the atoll system. Multidimensional scaling showed that the flora of French Frigate Shoals exhibits strong similar- ities to that of the main Hawaiian Islands and has less commonality with that of most other Pacific island groups. French Frigate Shoals, an atoll located Martini 2002, Maragos and Gulko 2002). close to the center of the 2,600-km-long Ha- The National Oceanic and Atmospheric Ad- waiian Archipelago, is part of the federally ministration (NOAA) Fisheries Coral Reef protected Northwestern Hawaiian Islands Ecosystem Division (CRED) and Northwest- Coral Reef Ecosystem Reserve. In stark con- ern Hawaiian Islands Reef Assessment and trast to the more densely populated main Ha- Monitoring Program (NOWRAMP) began waiian Islands, the reefs within the ecosystem conducting yearly assessment and monitoring reserve continue to be dominated by top of subtropical reef ecosystems at French predators such as sharks and jacks (ulua) and Frigate Shoals in 2000 to better support the serve as a refuge for numerous rare and long-term conservation and protection of endangered species no longer found in more this relatively intact ecosystem and to gain a degraded reef systems (Friedlander and De- better understanding of natural biological and oceanographic processes in this area. -
New Records of Benthic Marine Algae and Cyanobacteria for Costa Rica, and a Comparison with Other Central American Countries
Helgol Mar Res (2009) 63:219–229 DOI 10.1007/s10152-009-0151-1 ORIGINAL ARTICLE New records of benthic marine algae and Cyanobacteria for Costa Rica, and a comparison with other Central American countries Andrea Bernecker Æ Ingo S. Wehrtmann Received: 27 August 2008 / Revised: 19 February 2009 / Accepted: 20 February 2009 / Published online: 11 March 2009 Ó Springer-Verlag and AWI 2009 Abstract We present the results of an intensive sampling Rica; we discuss this result in relation to the emergence of program carried out from 2000 to 2007 along both coasts of the Central American Isthmus. Costa Rica, Central America. The presence of 44 species of benthic marine algae is reported for the first time for Costa Keywords Marine macroalgae Á Cyanobacteria Á Rica. Most of the new records are Rhodophyta (27 spp.), Costa Rica Á Central America followed by Chlorophyta (15 spp.), and Heterokontophyta, Phaeophycea (2 spp.). Overall, the currently known marine flora of Costa Rica is comprised of 446 benthic marine Introduction algae and 24 Cyanobacteria. This species number is an under estimation, and will increase when species of benthic The marine benthic flora plays an important role in the marine algae from taxonomic groups where only limited marine environment. It forms the basis of many marine information is available (e.g., microfilamentous benthic food chains and harbors an impressive variety of organ- marine algae, Cyanobacteria) are included. The Caribbean isms. Fish, decapods and mollusks are among the most coast harbors considerably more benthic marine algae (318 prominent species associated with the marine flora, which spp.) than the Pacific coast (190 spp.); such a trend has serves these animals as a refuge and for alimentation (Hay been observed in all neighboring countries. -
Plate. Acetabularia Schenckii
Training in Tropical Taxonomy 9-23 July, 2008 Tropical Field Phycology Workshop Field Guide to Common Marine Algae of the Bocas del Toro Area Margarita Rosa Albis Salas David Wilson Freshwater Jesse Alden Anna Fricke Olga Maria Camacho Hadad Kevin Miklasz Rachel Collin Andrea Eugenia Planas Orellana Martha Cecilia Díaz Ruiz Jimena Samper Villareal Amy Driskell Liz Sargent Cindy Fernández García Thomas Sauvage Ryan Fikes Samantha Schmitt Suzanne Fredericq Brian Wysor From July 9th-23rd, 2008, 11 graduate and 2 undergraduate students representing 6 countries (Colombia, Costa Rica, El Salvador, Germany, France and the US) participated in a 15-day Marine Science Network-sponsored workshop on Tropical Field Phycology. The students and instructors (Drs. Brian Wysor, Roger Williams University; Wilson Freshwater, University of North Carolina at Wilmington; Suzanne Fredericq, University of Louisiana at Lafayette) worked synergistically with the Smithsonian Institution's DNA Barcode initiative. As part of the Bocas Research Station's Training in Tropical Taxonomy program, lecture material included discussions of the current taxonomy of marine macroalgae; an overview and recent assessment of the diagnostic vegetative and reproductive morphological characters that differentiate orders, families, genera and species; and applications of molecular tools to pertinent questions in systematics. Instructors and students collected multiple samples of over 200 algal species by SCUBA diving, snorkeling and intertidal surveys. As part of the training in tropical taxonomy, many of these samples were used by the students to create a guide to the common seaweeds of the Bocas del Toro region. Herbarium specimens will be contributed to the Bocas station's reference collection and the University of Panama Herbarium. -
The Marine Species of Cladophora (Chlorophyta) from the South African East Coast
NovaHedwigia 76 1—2 45—82 Stuttgart, Februar 2003 The marine species of Cladophora (Chlorophyta) from the South African East Coast by F. Leliaert and E. Coppejans Research Group Phycology, Department of Biology, Ghent University, Krijgslaan 281, S8 B-9000 Ghent, Belgium E-mails: [email protected] and [email protected] With 16 figures and 5 tables Leliaert, F. & E. Coppejans (2003): The marine species of Cladophora (Chlorophyta) from the South African East Coast. - Nova Hedwigia 76: 45-82. Abstract: Twelve species of the genus Cladophora occur along the South African East Coast. Detailed descriptions and illustrations are presented. Four species are recorded for the first time in South Africa: C. catenata , C. vagabunda , C. horii and C. dotyana; the last two are also new records for the Indian Ocean. A comparison of the South African C. rugulosa specimens with specimens of C. prolifera from South Africa and other regions have shown that these species are not synonymous as previously considered, leading to the resurrection of C. rugulosa which is probably a South African endemic. Key words: Cladophora, C. catenata , C. dotyana, C. horii, C. prolifera , C. rugulosa , C. vagabunda , South Africa, KwaZulu-Natal. Introduction Cladophora Kützing is one of the largest green-algal genera and has a worldwide distribution. Within the class Cladophorophyceae the genus Cladophora is characterized by its simple thallus architecture: branched, uniseriate filaments of multinucleate cells. Eleven different architectural types (sections) are distinguished in the genus (van den Hoek 1963, 1982; van den Hoek & Chihara 2000). Recent studies based on morphological and molecular data have proven that Cladophora is polyphyletic (van den Hoek 1982; Bakker et al. -
Marine Macroalgal Biodiversity of Northern Madagascar: Morpho‑Genetic Systematics and Implications of Anthropic Impacts for Conservation
Biodiversity and Conservation https://doi.org/10.1007/s10531-021-02156-0 ORIGINAL PAPER Marine macroalgal biodiversity of northern Madagascar: morpho‑genetic systematics and implications of anthropic impacts for conservation Christophe Vieira1,2 · Antoine De Ramon N’Yeurt3 · Faravavy A. Rasoamanendrika4 · Sofe D’Hondt2 · Lan‑Anh Thi Tran2,5 · Didier Van den Spiegel6 · Hiroshi Kawai1 · Olivier De Clerck2 Received: 24 September 2020 / Revised: 29 January 2021 / Accepted: 9 March 2021 © The Author(s), under exclusive licence to Springer Nature B.V. 2021 Abstract A foristic survey of the marine algal biodiversity of Antsiranana Bay, northern Madagas- car, was conducted during November 2018. This represents the frst inventory encompass- ing the three major macroalgal classes (Phaeophyceae, Florideophyceae and Ulvophyceae) for the little-known Malagasy marine fora. Combining morphological and DNA-based approaches, we report from our collection a total of 110 species from northern Madagas- car, including 30 species of Phaeophyceae, 50 Florideophyceae and 30 Ulvophyceae. Bar- coding of the chloroplast-encoded rbcL gene was used for the three algal classes, in addi- tion to tufA for the Ulvophyceae. This study signifcantly increases our knowledge of the Malagasy marine biodiversity while augmenting the rbcL and tufA algal reference libraries for DNA barcoding. These eforts resulted in a total of 72 new species records for Mada- gascar. Combining our own data with the literature, we also provide an updated catalogue of 442 taxa of marine benthic -
Distribution of Epiphytic Macroalgae on the Thalli of Their Hosts in Cuba
Acta Botanica Brasilica 27(4): 815-826. 2013. Distribution of epiphytic macroalgae on the thalli of their hosts in Cuba Yander Luis Diez García1, Abdiel Jover Capote2,6, Ana María Suárez Alfonso3, Liliana María Gómez Luna4 and Mutue Toyota Fujii5 Received: 4 April, 2012. Accepted: 14 October, 2013 ABSTRACT We investigated the distribution of epiphytic macroalgae on the thalli of their hosts at eight localities along the sou- theastern coast of Cuba between June 2010 and March 2011. We divided he epiphytes in two groups according to their distribution on the host: those at the base of the thallus and those on its surface. We determining the dissimilarity between the zones and the species involved. We identified 102 taxa of epiphytic macroalgae. There were significant differences between the two zones. In 31 hosts, the number of epiphytes was higher on the surface of the thallus, whereas the number of epiphytes was higher at the thallus base in 25 hosts, and the epiphytes were equally distributed between the two zones in five hosts (R=−0.001, p=0.398). The mean dissimilarity between the two zones, in terms of the species composition of the epiphytic macroalgae, was 96.64%. Hydrolithon farinosum and Polysiphonia atlantica accounted for 43.76% of the dissimilarity. Among macroalgae, the structure of the thallus seems to be a determinant of their viability as hosts for epiphytes. Key words: Chlorophyta, epiphytism, distribution, Phaeophyceae, Rhodophyta Introduction scales is a potentially productive approach. It is important to understand the patterns of abundance of all sympatric The structure of intertidal marine communities is deter- epiphytic species along the various gradients, because in- mined by a combination of physical factors and biotic interac- terspecific relationships could represent one of the factors tions (Little & Kitching 1996; Wernberg & Connell 2008). -
Behind Anemone Lines: Determining the Environmental Drivers Influencing Lagoonal Benthic Communities, with Special Reference to the Anemone Nematostella Vectensis
Behind Anemone Lines: Determining the environmental drivers influencing lagoonal benthic communities, with special reference to the anemone Nematostella vectensis. by Jessica R. Bone Bournemouth University December 2018 Copyright Statement This copy of the thesis has been supplied on condition that anyone who consults it is understood to recognize that its copyright rests with its author and due acknowledgement must always be made of the use of any material contained in, or derived from, this thesis. i Behind Anemone Lines: Determining the environmental drivers influencing lagoonal benthic communities, with special reference to the anemone Nematostella vectensis. Jess R. Bone Abstract Climate change induced sea level rise and increase in associated storms is impacting the coastal zone worldwide. Lagoons are a transitional ecosystem on the coast that are threatened with habitat loss due to ingress of seawater, though conversely this also represents an opportunity for lagoon habitat creation. It is important to quantify the spatio-temporal trends of macrozoobenthic communities and abiotic factors to determine the ecological health of lagoon sites. Such information will ensure optimal and adaptive management of these rare and protected ecosystems. This thesis examines the spatial distribution of macrozoobenthic assemblages and the abiotic and biotic factors that may determine their abundance, richness and distribution at tidally restricted urban lagoon at Poole Park on the south coast of England. The macrozoobenthic assemblages were sampled using a suction corer during a spatially comprehensive survey in November 2017, in addition to aquatic and sediment variables such as salinity, temperature, organic matter content and silt content. Species richness and density were significantly lower in areas of high organic matter and silt content, indicative of hostile conditions. -
Tsuda RT. 2002. Checklist of the Marine Benthic Algae from the Palau Archipelago Based on Past
Checklist of the Marine Benthic Algae from the Palau Archipelago Based on Past References Roy T. Tsuda Marine Laboratory, University of Guam, UOG Station, Mangilao, Guam 96923 P.O. Box 7086, Koror, Republic of Palau 96940 PICRC Publication 02-019 September 2002 TABLE OF CONTENTS Page Introduction 1 Division Cyanophyta 3 Class Cyanophyceae Order Chroococcales 3 Family Entophysalidaceae Family Microcystaceae Order Oscillatoriales 3 Family Oscillatoriaceae Family Phormidiaceae Family Schizothrichaceae Order Nostocales 4 Family Microchaetaceae Family Nostocaceae Family Rivulariaceae Order Stigonematales 4 Family Mastigocladaceae Division Chlorophyta 5 Class Chlorophyceae Order Ulvales 5 Family Ulvaceae Order Cladophorales 5 Family Anadyomenaceae Family Cladophoraceae Family Siphonocladaceae Family Valoniaceae Order Bryopsidales 6 Family Bryopsidaceae Family Caulerpaceae Family Codiaceae ii Page Family Halimedaceae Family Udoteaceae Order Dasycladales 9 Family Dasycladaceae Division Phaeophyta 9 Class Phaeophyceae Order Ectocarpales 9 Family Ectocarpaceae Family Ralfsiaceae Order Sphacelariales 10 Family Sphacelariaceae Order Dictyotales 10 Family Dictyotaceae Order Scytosiphonales 11 Family Scytosiphonaceae Order Fucales 11 Family Sargassaceae Division Rhodophyta 11 Class Rhodophyceae Subclass Bangiophycidae 11 Order Erythropeltidales 11 Family Erythrotrichiaceae Subclass Florideophycidae 12 Order Acrochaetiales 12 Family Acrochaetiaceae Order Nemaliales 12 Family Galaxauraceae Family Liagoraceae iii Page Order Gelidiales 12 Family GelidiaceaeFamily