Plate. Acetabularia Schenckii
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Phylogenetic Analysis of Rhizoclonium (Cladophoraceae, Cladophorales), and the Description of Rhizoclonium Subtile Sp
Phytotaxa 383 (2): 147–164 ISSN 1179-3155 (print edition) http://www.mapress.com/j/pt/ PHYTOTAXA Copyright © 2018 Magnolia Press Article ISSN 1179-3163 (online edition) https://doi.org/10.11646/phytotaxa.383.2.2 Phylogenetic analysis of Rhizoclonium (Cladophoraceae, Cladophorales), and the description of Rhizoclonium subtile sp. nov. from China ZHI-JUAN ZHAO1,2, HUAN ZHU3, GUO-XIANG LIU3* & ZHENG-YU HU4 1Key Laboratory of Environment Change and Resources Use in Beibu Gulf (Guangxi Teachers Education University), Ministry of Education, Nanning, 530001, P. R. China 2 Guangxi Key Laboratory of Earth Surface Processes and Intelligent Simulation (Guangxi Teachers Education University), Nanning, 530001, P. R. China 3Key Laboratory of Algal Biology, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan 430072, P. R. China 4State Key Laboratory of Freshwater Ecology and Biotechnology, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan 430072, P. R. China *e-mail:[email protected] Abstract The genus Rhizoclonium (Cladophoraceae, Cladophorales) accommodates uniserial, unbranched filamentous algae, closely related to Cladophora and Chaetomorpha. Its taxonomy has been problematic for a long time due to the lack of diagnostic morphological characters. To clarify the species diversity and taxonomic relationships of this genus, we collected and analyzed thirteen freshwater Rhizoclonium specimens from China. The morphological traits of these specimens were observed and described in detail. Three nuclear gene markers small subunit ribosomal DNA (SSU), large subunit ribosomal DNA (LSU) and internal transcribed spacer 2 (ITS2) sequences were analyzed to elucidate their phylogenetic relationships. The results revealed that there were at least fifteen molecular species assignable to Rhizoclonium and our thirteen specimens were distributed in four clades. -
Morphometric Analysis of Surface Utricles in Halimeda Tuna (Bryopsidales, Ulvophyceae) Reveals Variation in Their Size and Symmetry Within Individual Segments
S S symmetry Article Morphometric Analysis of Surface Utricles in Halimeda tuna (Bryopsidales, Ulvophyceae) Reveals Variation in Their Size and Symmetry within Individual Segments Jiri Neustupa * and Yvonne Nemcova Department of Botany, Faculty of Science, Charles University, Prague, 12801 Benatska 2, Czech Republic; [email protected] * Correspondence: [email protected] Received: 26 June 2020; Accepted: 20 July 2020; Published: 1 August 2020 Abstract: Calcifying marine green algae of genus Halimeda have siphonous thalli composed of repeated segments. Their outer surface is formed by laterally appressed peripheral utricles which often form a honeycomb structure, typically with varying degrees of asymmetry in the individual polygons. This study is focused on a morphometric analysis of the size and symmetry of these polygons in Mediterranean H. tuna. Asymmetry of surface utricles is studied using a continuous symmetry measure quantifying the deviation of polygons from perfect symmetry. In addition, the segment shapes are also captured by geometric morphometrics and compared to the utricle parameters. The area of surface utricles is proved to be strongly related to their position on segments, where utricles near the segment bases are considerably smaller than those located near the apical and lateral margins. Interestingly, this gradient is most pronounced in relatively large reniform segments. The polygons are most symmetric in the central parts of segments, with asymmetry uniformly increasing towards the segment margins. Mean utricle asymmetry is found to be unrelated to segment shapes. Systematic differences in utricle size across different positions might be related to morphogenetic patterns of segment development, and may also indicate possible small-scale variations in CaCO3 content within segments. -
Exhaustive Reanalysis of Barcode Sequences from Public
Exhaustive reanalysis of barcode sequences from public repositories highlights ongoing misidentifications and impacts taxa diversity and distribution: a case study of the Sea Lettuce. Antoine Fort1, Marcus McHale1, Kevin Cascella2, Philippe Potin2, Marie-Mathilde Perrineau3, Philip Kerrison3, Elisabete da Costa4, Ricardo Calado4, Maria Domingues5, Isabel Costa Azevedo6, Isabel Sousa-Pinto6, Claire Gachon3, Adrie van der Werf7, Willem de Visser7, Johanna Beniers7, Henrice Jansen7, Michael Guiry1, and Ronan Sulpice1 1NUI Galway 2Station Biologique de Roscoff 3Scottish Association for Marine Science 4University of Aveiro 5Universidade de Aveiro 6University of Porto Interdisciplinary Centre of Marine and Environmental Research 7Wageningen University & Research November 24, 2020 Abstract Sea Lettuce (Ulva spp.; Ulvophyceae, Ulvales, Ulvaceae) is an important ecological and economical entity, with a worldwide distribution and is a well-known source of near-shore blooms blighting many coastlines. Species of Ulva are frequently misiden- tified in public repositories, including herbaria and gene banks, making species identification based on traditional barcoding hazardous. We investigated the species distribution of 295 individual distromatic foliose strains from the North East Atlantic by traditional barcoding or next generation sequencing. We found seven distinct species, and compared our results with all worldwide Ulva spp sequences present in the NCBI database for the three barcodes rbcL, tuf A and the ITS1. Our results demonstrate a large degree of species misidentification in the NCBI database. We estimate that 21% of the entries pertaining to foliose species are misannotated. In the extreme case of U. lactuca, 65% of the entries are erroneously labelled specimens of another Ulva species, typically U. fenestrata. In addition, 30% of U. -
Marine Brown Algae (Phaeophyta) from the North Coast of Papua New Guinea, with a Description of Dictyota Mugneana Sp. Nov
Cryptogamie, Algal., 2001, 22 (1): IS-40 0 2001 Adac/l?ditions scientifiques et medicales Elsevier SAS. Tous droits reserves SOl81-1568(00)01047-3/PLA Marine brown algae (Phaeophyta) from the north coast of Papua New Guinea, with a description of Dictyota mugneana sp. nov. Eric COPPEJANp*, Olivier DE CLERCKb and Frederik LELIAERT Research group Phycology, Department Biology, Ghent University, K.L. Ledeganckstraat, 35 9000. Ghent, Belgium (Received 10 July 2000, accepted 14 November 2000) Abstract - The marine benthic brown algae of the north coast of Papua New Guinea (mainly from Madang province) are documented, based on collections made by the first author, between 1980 and 1990. All records [34 identified taxa (+Sargassum spp.)] are listed with bibliographic, taxonomic, nomenclatural and biogeographical notes. The specimens belonging to the genus Dictyota are identified according to recent species definitions. D. magneana De Clerck et Coppejans is described as new to science. Only some representatives of the genus Sargassum have been identified to species level. The phaeophycean flora of the north coast is very similar to that of the south coast (Port Moresby area); nevertheless some differences can be observed. 0 2001 Adac/Editions scientifiques et medicales Elsevier SAS Phaeophyta I Papua New Guinea I checklist I Dictyota magneana sp. nav. R&urn6 - Les PhCophyckes hcnthiques de la tote Nord de la Papouasie Nouvelle Guinee (surtout de la Province de Madang) sont documentees, base sur les collections du premier auteur, effect&es entre 1980 et 1990. Pour chaque espece (+ de 34 taxons) des don&es bibliographiques, taxonomiques, nomenclaturales et biogeographiques sont ajoutr5es. -
Taonia Abbottiana Sp.Nov. (Dictyotales, Phaeophyceae)
FAU Institutional Repository http://purl.fcla.edu/fau/fauir This paper was submitted by the faculty of FAU’s Harbor Branch Oceanographic Institute. Notice: ©2004 Adac. Tous droits reserves. This manuscript is an author version with the final publication available and may be cited as: Littler, D. S., & Littler, M. M. (2004). Taonia abbottiana sp. nov. (Dictyotales, Phaeophyceae) from the tropical western Atlantic. Cryptogamie Algologie, 25(4), 419-427. Cryptogamie, Algol., 2004, 25 (4): 419-427 © 2004 Adac. Tous droits reserves Taonia abbottiana sp. nov. (Dictyotales, Phaeophyceae) from the Tropical Western Atlantic1 Diane S. LITTLERa, b* & Mark M. LITTLERb aDivision of Marine Science, Harbor Branch Oceanographic Institution, 5600 U.S. 1 North, Fort Pierce, Florida 34946, USA. b National Museum of Natural History, Department of Botany, NHB-166, P.O. Box 37012, Smithsonian Institution, Washington, D. C. 20013-7012, USA. (Received 19 May 2004, accepted 18 August 2004) Abstract - A new species of brown algae, Taonia abbottiana D.S. Littler et M.M. Littler, is described from the tropical western Atlantic. To date, this is the only member of the genus reported from the region. Taonia abbottiana differs from other species of the genus in having (1) sporangia raised above the surface layer on a stalk composed of two cells, and (2) in addition having a surface cortical layer of differentiated cells that are smaller than those of the medullary layers. Taonia abbottiana has often been confused with Stypopodium zonate, but the two differ anatomically in the development of cells directly behind the growing margin and, when living at similar depths, T. -
Syllabus of Msc Degree in Botany W.E.F. 2019-20
UNIVERSITY OF KERALA THIRUVANANTHAPURAM M.Sc. Degree in Botany (Semester System) Revised Course Structure & Syllabus (w.e.f. 2019 Admissions) October 2018 PG BOARD OF STUDIES IN BOTANY UNIVERSITY OF KERALA M.Sc. Degree in Botany (Semester System) Revised Course structure Semes Paper Hours/ Hours / ESA Title of the Paper Maximum Marks ter Code semester week hours L P 3 CA ESA Total Phycology, Mycology, BO 211 108 6 2 3 25 75 100 Microbiology & Plant Pathology Bryophyta, Pteridophyta & I BO212 Gymnosperms 108 6 2 3 25 75 100 Histology, Reproductive Biology, BO213 Microtechnique & Histochemistry 108 6 3 3 25 75 100 BO214 Practical I 126 7 4 25♦ 75♦ Δ Total for Semester I 450 18 7 13 75 225 300 Taxonomy of Angiosperms, BO 221 Economic Botany & Ethnobotany 108 6 2.5 3 25 75 100 Environmental Biology, Forest BO 222 Botany, Phytogeography & 108 6 2 3 25 75 100 Conservation Biology II Cell Biology, Genetics & Evolution BO 223 108 6 2.5 3 25 75 100 Practical I 100♦ BO 224 Practical II 126 7 4 25 75 100 BO 225 Submission I* (I A+1B) 25+25 50 Total for Semester II 450 18 7 13 100 350 550 Plant Breeding, Horticulture & BO 231 108 6 1.5 3 25 75 100 Biostatistics Biochemistry, Plant Physiology BO 232 & Research Methodology 108 6 3 3 25 75 100 III Molecular Biology, Immunology & BO 233 108 6 2.5 3 25 75 100 Plant Biotechnology BO 234 Practical III 126 7 4 25♦♦ 75♦♦ Δ Δ Total for Semester III 450 18 7 13 75 225 300 Special Paper –I BO 241 Bioinformatics & Biophysics 144 8 2 3 25 75 100 BO 242 Special Paper –II Elective 144 8 5 3 25 75 100 Practical III 100♦♦ IV BO 243 Practical IV 126 7 4 25 75 100 BO 244 Dissertation 36 2 100 100 BO 245 Submissions II** 50 50 BO 246 Comprehensive Viva Voce 25 . -
Plant Evolution Acetabularia Is a Genus of Green Algae
Botany – Plant Evolution Acetabularia is a genus of green algae, specifically of the Polyphysaceae family. Typically found in subtropical waters, Acetabularia is a single- celled organism, but gigantic in size and complex in form, making it an excellent model organism for studying cell biology. The name, Acetabularia, derives from the Latin word acetabulum, a broad, shallow cup used for dipping bread; the upturned cap of Acetabularia resembles such a cup. For this reason, it is also sometimes called mermaid's wineglass.[6] Acetabularia was the first demonstration that genes are encoded by DNA in eukaryotes. Cladophora is a genus of reticulated filamentous Ulvophyceae (green algae). The genus Cladophora contains many species that are very hard to tell apart and classify, mainly because of the great variation in their appearances, which is affected by habitat, age and environmental conditions. Unlike Spirogyra the filaments of Cladophora branch and it doesn't undergo conjugation. They have swimming gametes instead. There are two multicellular stages in its life cycle - a haploid gametophyte and a diploid sporophyte - which look highly similar. The only way to tell the two stages apart is to either count their chromosomes, or examine their offspring. The haploid gametophyte produces haploid gametes by mitosis and the diploid sporophyte produces haploid spores by meiosis. The only visible difference between the gametes and spores of Cladophora is that the gametes have two flagella and the spores have four. Cladophora is an invahsive species damaging the fishing industry and shoreline property values along the Great Lakes in the United States Chara species are multicellular and superficially resemble land plants because of stem-like and leaf-like structures. -
Neoproterozoic Origin and Multiple Transitions to Macroscopic Growth in Green Seaweeds
Neoproterozoic origin and multiple transitions to macroscopic growth in green seaweeds Andrea Del Cortonaa,b,c,d,1, Christopher J. Jacksone, François Bucchinib,c, Michiel Van Belb,c, Sofie D’hondta, f g h i,j,k e Pavel Skaloud , Charles F. Delwiche , Andrew H. Knoll , John A. Raven , Heroen Verbruggen , Klaas Vandepoeleb,c,d,1,2, Olivier De Clercka,1,2, and Frederik Leliaerta,l,1,2 aDepartment of Biology, Phycology Research Group, Ghent University, 9000 Ghent, Belgium; bDepartment of Plant Biotechnology and Bioinformatics, Ghent University, 9052 Zwijnaarde, Belgium; cVlaams Instituut voor Biotechnologie Center for Plant Systems Biology, 9052 Zwijnaarde, Belgium; dBioinformatics Institute Ghent, Ghent University, 9052 Zwijnaarde, Belgium; eSchool of Biosciences, University of Melbourne, Melbourne, VIC 3010, Australia; fDepartment of Botany, Faculty of Science, Charles University, CZ-12800 Prague 2, Czech Republic; gDepartment of Cell Biology and Molecular Genetics, University of Maryland, College Park, MD 20742; hDepartment of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA 02138; iDivision of Plant Sciences, University of Dundee at the James Hutton Institute, Dundee DD2 5DA, United Kingdom; jSchool of Biological Sciences, University of Western Australia, WA 6009, Australia; kClimate Change Cluster, University of Technology, Ultimo, NSW 2006, Australia; and lMeise Botanic Garden, 1860 Meise, Belgium Edited by Pamela S. Soltis, University of Florida, Gainesville, FL, and approved December 13, 2019 (received for review June 11, 2019) The Neoproterozoic Era records the transition from a largely clear interpretation of how many times and when green seaweeds bacterial to a predominantly eukaryotic phototrophic world, creat- emerged from unicellular ancestors (8). ing the foundation for the complex benthic ecosystems that have There is general consensus that an early split in the evolution sustained Metazoa from the Ediacaran Period onward. -
Successions of Phytobenthos Species in a Mediterranean Transitional Water System: the Importance of Long Term Observations
A peer-reviewed open-access journal Nature ConservationSuccessions 34: 217–246 of phytobenthos (2019) species in a Mediterranean transitional water system... 217 doi: 10.3897/natureconservation.34.30055 RESEARCH ARTICLE http://natureconservation.pensoft.net Launched to accelerate biodiversity conservation Successions of phytobenthos species in a Mediterranean transitional water system: the importance of long term observations Antonella Petrocelli1, Ester Cecere1, Fernando Rubino1 1 Water Research Institute (IRSA) – CNR, via Roma 3, 74123 Taranto, Italy Corresponding author: Antonella Petrocelli ([email protected]) Academic editor: A. Lugliè | Received 25 September 2018 | Accepted 28 February 2019 | Published 3 May 2019 http://zoobank.org/5D4206FB-8C06-49C8-9549-F08497EAA296 Citation: Petrocelli A, Cecere E, Rubino F (2019) Successions of phytobenthos species in a Mediterranean transitional water system: the importance of long term observations. In: Mazzocchi MG, Capotondi L, Freppaz M, Lugliè A, Campanaro A (Eds) Italian Long-Term Ecological Research for understanding ecosystem diversity and functioning. Case studies from aquatic, terrestrial and transitional domains. Nature Conservation 34: 217–246. https://doi.org/10.3897/ natureconservation.34.30055 Abstract The availability of quantitative long term datasets on the phytobenthic assemblages of the Mar Piccolo of Taranto (southern Italy, Mediterranean Sea), a lagoon like semi-enclosed coastal basin included in the Italian LTER network, enabled careful analysis of changes occurring in the structure of the community over about thirty years. The total number of taxa differed over the years. Thirteen non-indigenous species in total were found, their number varied over the years, reaching its highest value in 2017. The dominant taxa differed over the years. -
M., 2012. Brown Algae from Chaojing, Keelung City, Taiwan. Memoirs Of
ῒῐΐ ῌ (48), pp. 149ῌ157, 2012 3 ῑ 28 Mem. Natl. Mus. Nat. Sci., Tokyo, (48), pp. 149ῌ157, March28, 2012 Brown Algae from Chaojing, Keelung City, Taiwan Taiju Kitayama1, ῍ and Showe-Mei Lin2 1 Department of Botany, National Museum of Nature and Science, 4ῌ1ῌ1 Amakubo, Tsukuba, Ibaraki 305ῌ0005, Japan 2 Institute of Marine Biology, National Taiwan Ocean University, Keelung 20224, Taiwan, Republic of China ῍ E-mail: [email protected] Abstract. Sixteen species of brown algae (Phaeophyceae) were reported from the shore of Chaojing, Keelung, Taiwan. Among them eight species belong to the Dictyotales and two to the Fucales. Consequently, the seaweed community of Chaojing is considered as typical of subtropical one, while it has also several temperate species together. Spatoglossum asperum, Ralfsia verrucosa, Feldmannia irregularis and Scytosiphon gracilis are new records for Taiwan. Key words: brown algae, Feldmannia irregularis, flora, Keelung, Phaeophyceae, Spatoglossum asperum, Taiwan. brown algae. Introduction Brown algae (Phaeophyceae, Ochrophyta, Materials and Methods kingdom Chromista) are most important bo- tanical components of coastal marine com- The collections of brown algae were carried munities, in terms of productivity and biomass. out at the coast of Chaojing, Keelung City, In Taiwan the marine macro-algal flora has Taiwan (33῍07῎49῏N, 139῍48῎24῏E) on been well investigated and published numerous March 2, March 3, May 25, May 27 in 2010. reports by many algologists since Martens The samples were collected from both inter- (1868) and there had been recorded over 500 tidal zone and subtidal zone by walking and species of marine algae from the coasts and snorkeling. -
Langston R and H Spalding. 2017
A survey of fishes associated with Hawaiian deep-water Halimeda kanaloana (Bryopsidales: Halimedaceae) and Avrainvillea sp. (Bryopsidales: Udoteaceae) meadows Ross C. Langston1 and Heather L. Spalding2 1 Department of Natural Sciences, University of Hawai`i- Windward Community College, Kane`ohe,¯ HI, USA 2 Department of Botany, University of Hawai`i at Manoa,¯ Honolulu, HI, USA ABSTRACT The invasive macroalgal species Avrainvillea sp. and native species Halimeda kanaloana form expansive meadows that extend to depths of 80 m or more in the waters off of O`ahu and Maui, respectively. Despite their wide depth distribution, comparatively little is known about the biota associated with these macroalgal species. Our primary goals were to provide baseline information on the fish fauna associated with these deep-water macroalgal meadows and to compare the abundance and diversity of fishes between the meadow interior and sandy perimeters. Because both species form structurally complex three-dimensional canopies, we hypothesized that they would support a greater abundance and diversity of fishes when compared to surrounding sandy areas. We surveyed the fish fauna associated with these meadows using visual surveys and collections made with clove-oil anesthetic. Using these techniques, we recorded a total of 49 species from 25 families for H. kanaloana meadows and surrounding sandy areas, and 28 species from 19 families for Avrainvillea sp. habitats. Percent endemism was 28.6% and 10.7%, respectively. Wrasses (Family Labridae) were the most speciose taxon in both habitats (11 and six species, respectively), followed by gobies for H. kanaloana (six Submitted 18 November 2016 species). The wrasse Oxycheilinus bimaculatus and cardinalfish Apogonichthys perdix Accepted 13 April 2017 were the most frequently-occurring species within the H. -
New Records of Benthic Marine Algae and Cyanobacteria for Costa Rica, and a Comparison with Other Central American Countries
Helgol Mar Res (2009) 63:219–229 DOI 10.1007/s10152-009-0151-1 ORIGINAL ARTICLE New records of benthic marine algae and Cyanobacteria for Costa Rica, and a comparison with other Central American countries Andrea Bernecker Æ Ingo S. Wehrtmann Received: 27 August 2008 / Revised: 19 February 2009 / Accepted: 20 February 2009 / Published online: 11 March 2009 Ó Springer-Verlag and AWI 2009 Abstract We present the results of an intensive sampling Rica; we discuss this result in relation to the emergence of program carried out from 2000 to 2007 along both coasts of the Central American Isthmus. Costa Rica, Central America. The presence of 44 species of benthic marine algae is reported for the first time for Costa Keywords Marine macroalgae Á Cyanobacteria Á Rica. Most of the new records are Rhodophyta (27 spp.), Costa Rica Á Central America followed by Chlorophyta (15 spp.), and Heterokontophyta, Phaeophycea (2 spp.). Overall, the currently known marine flora of Costa Rica is comprised of 446 benthic marine Introduction algae and 24 Cyanobacteria. This species number is an under estimation, and will increase when species of benthic The marine benthic flora plays an important role in the marine algae from taxonomic groups where only limited marine environment. It forms the basis of many marine information is available (e.g., microfilamentous benthic food chains and harbors an impressive variety of organ- marine algae, Cyanobacteria) are included. The Caribbean isms. Fish, decapods and mollusks are among the most coast harbors considerably more benthic marine algae (318 prominent species associated with the marine flora, which spp.) than the Pacific coast (190 spp.); such a trend has serves these animals as a refuge and for alimentation (Hay been observed in all neighboring countries.