The Comparative Enzymology and Cell Origin of Rat Hepatomas II

Total Page:16

File Type:pdf, Size:1020Kb

The Comparative Enzymology and Cell Origin of Rat Hepatomas II The Comparative Enzymology and Cell Origin of Rat Hepatomas II. Glutamate Dehydrogenase, Choline Oxidase, and Glucose-6-phosphatase* HENRY C. PITOT~ (McArdle Memorial Laboratory, The Medical School, University of Wisconsin, Madison, Wis.) SUMMARY The activities of glucose-6-phosphatase, glutamate dehydrogcnase, and choline ox[- dase were determined in some or all of ten rat hepatomas, including the Novikoff, Dunning L-C18, McCoy MDAB, and the Morris 3683, 39524A, and 51~3 hepatomas, together with primary hepatomas produced by feeding ethionine or 3%nethyl-4- dimethylaminoazobenzene, and transplanted hepatomas derived from the primary tumors induced with ethionine. Of these neoplasms, only the Morris hepatoma 51~3, the primary and transplanted ethionine-induced hepatomas, and one of the 3'-methyl-4-dimethylaminoazobenzene- induced tumors possessed significant glucose-6-phosphatase activity. These same tu- mors in addition to the Dunning L-C18 hepatoma had demonstrable glutamate dehydro- genase activity, whereas the other neoplasms tested failed to show significant activity of this enzyme. With the exception of the primary dye-induced neoplasm, which was not tested, only those neoplasms having significant glucose-6-phosphatase activities showed any choline oxidase activity. Of those neoplasms tested for tryptophan peroxidase activity only the Morris hepa- toma 51~3, the primary ethionine-induced hepatoma, and some of the Dunning L-C18 hepatomas had any demonstrable activity of this enzyme. In contrast to most of the enzymatic activities reported here, the threonine dehydrase activity of the Morris hepatoma 51r was of the order of 40 times the level of this enzyme in the livers of animals bearing this tumor. The significance of these results in relation to the biochemical and morphologic classification of experimental hepatic carcinomas, as well as the importance of study- ing the biochemistry of slowly growing, highly differentiated experimental neoplasms such as the Morris hepatoma 51~3, is discussed. In the first paper of this series (~4) the deoxy- the transplantable Dunning L-C18 hepatoma (7) cytidylie acid (dCMP) * deaminase activity and and the transplantable Morris hepatoma 51~23 the thymine degradative eapaeity of a number of (16), had demonstrable dCMP deaminase activ- primary and transplanted rat hepatomas were de- ity, but only one of the ten, the Morris hepatoma termined. Of ten hepatomas studied, all but two, 51523, eould degrade thymine. Normal rat liver had * This work was supported in part by a grant (No. C-646) 1The following abbreviations are used in the text: dCMP, to Prof. Van R. Potter from the National Cancer Institute, 5'-deoxyeytidylic acid; G-6-P, glucose-6-phosphate; G-6-Pase, National Institutes of Health, U.S. Public Health Service. glucose-6-phosphatase; GDH, glutamate dehydrogenase; CO, t Lillian Israel Memorial Fellow in Cancer Research of the choline oxidase; TPO, tryptophan peroxidase; TD, threonine dehydrase; DPN, diphosphopyridine nucleotide; TCA, tri- American Cancer Society, 1957-1960. chloroacetic acid; 3'-?r 8'-methyl-4-dimethylaminoazo- Received for publication April 4, 1960. benzene. 12652 Downloaded from cancerres.aacrjournals.org on September 25, 2021. © 1960 American Association for Cancer Research. PIToT--Enzymology and Origin of Rat Hepatomas. II 1~263 previously been shown to have no dCMP deami- Lowry and Lopez (13). Tim difference in the hi- nase activity (15) but did possess the necessary organic phosphate content of the control tube with enzyme system for the conversion of thymine 5~- no substrate and that containing G-6-P was a C t4 to C140_~ (5). In view of these findings it was measure of the G-6-P dephosphorylated by the postulated that both the Dunning and the 51~3 enzyme. hepatomas probably arose from cells that closely Glutamate dehydrogenase.--This enzyme was as- resembled a hepatic parenchymal cell. On the sayed in the forward reaction with the use of DPN other hand, those neoplasms having dCMP deami- and L-glutamic acid by a slight modification of the nase activity and no thymine degradative capacity procedure of Hogeboom and Schneider (10). The may have been more closely related to biliary final volume of the components was 3.0 ml., and epithelium (~1). the pH of the assay was 7.5. The change in optical To gain further biochemical evidence in support density at 340 mg was read every ~ minutes with of these postulates as well as to look for biochemi- the use of a Beckman model DU spectrophotome- cal differences between the highly differentiated ter and quartz cuvettes. The rate was followed Morris hepatoma 51~3 and rat liver, the activities until maximal rate was reached. This maximal rate of several other enzymes were determined in many was used in all calculations. of these hepatomas (~24). The results of this survey Choline oxidase.--This enzyme was assayed comprise the subject of this paper. manometrically by a slight modification of the pro- cedure described by Richert and Westerfeld (~6). MATERIALS AND METHODS The substrate was added directly to the reactio~ The neoplasms used in this study were the same chamber in ~Tarburg vessels having no side-arms. as those employed in the previous paper (~4). The After a 5-minute equilibration period, the first tumor-bearing animals were stunned by a blow on reading was taken. Readings were then taken at the head and their necks immediately dislocated to 10, 30, and 50 minutes. The first 10-minute reading obtain paralysis of the lower extremities. The tu- was not included in the calculations; 0.5 and 1.0 mor and the liver were quickly removed and placed ml. of homogenate were assayed with all the tu- in ice-cold 0.154 M KCl. The tumor tissue was rap- mors. idly dissected and any necrotic material removed Tryptophan peroxidase.--This enzyme was as- as completely as possible; 1:4 homogenates of the sayed by the procedure of Knox and Auerbac5 tissues in 0.154 M KC1 were prepared by homogeni- (11). zation for 3 minutes in an all-glass Potter-Elve- Threonine dehydrase.--The method described hjcm homogenizer. The homogenizer was kept in an by Sayre et al. (~7) was used for the assay of thbs ice bath during this procedure to dissipate any enzyme. frictional heat. Samples of each of the tissues to be All enzyme assays were carried out within homogenized were taken for histologic examina- hours of the death of the animal. In particular, tion. The tissue was fixed for 16 hours in Lesher's best results were obtained with the choline oxidase fixative (1~) and then placed in 70 per cent ethanol assay when the homogenate was less than 1 hour until embedded, sectioned, and stained with hema- old. Unless otherwise specified, all enzyme activi- toxylin and eosin. ties were expressed as ttmoles of product formed All enzyme assays described in this paper were per hour per gram protein. Protein was determined performed with the whole homogenate. by the method of Lowry et al. (14). Glucose-6-phosphatase.--The procedure for the Dipotassium G-6-P and DPN were obtained assay of this enzyme was essentially that used by from the Sigma Co. L-Threonine, L-tryptophan, Cori and Cori (6); 0.1 and 0.~ ml. of the homoge- and L-glutamic acid were obtained from the Cali- hate was added to a 13 X 100 mm. pyrex culture fornia Corporation. Choline chloride was a product tube containing 0.13 ml. of 0.1 M potassium citrate of Nutritional Biochemicals Corporation. buffer, pH 6.8, 0.04 ml. of 0.1 M potassium G-6-P, and sufficient water to make a final volume of 1.0 RESULTS ml. For each tube containing G-6-P a duplicate Glucose-6-phosphatase.--In Chart 1 are showI~ tube without substrate was prepared. All tubes the G-6-Pase activities of ten hepatomas ex- were incubated for 30 minutes at room tempera- pressed as /,moles of phosphorus liberated as in- ture with occasional shaking. At the end of this organic phosphate/gin protein/hr. Enzyme values time 1.0 ml. of 10 per cent TCA was added to each which were less than 50 gmoles/gm protein/hr tube. After the precipitated protein had been cen- were considered to be within the limits of accuracy trifuged off, 0.5 ml. of the supernatant was used of the method and of questionable significance~. for phosphorus determination by the method of Therefore, by these standards, only the Morris Downloaded from cancerres.aacrjournals.org on September 25, 2021. © 1960 American Association for Cancer Research. 1~64 Cancer Research Vol. ~0, September 1960 hepatoma 51~8 and the primary and transplanted neoplasm (H-l) showed almost no G-6-Pase activ- ethionine-induced hepatomas as well as one of the ity but exhibited a high level of deoxycytidylic 3'-Me-DAB-induced tumors contained significant acid deaminase (~4). Histologically, hepatoma H-1 amounts of the enzyme. The histology of the dye- showed a somewhat more uniform cytologic pat- induced neoplasm which showed G-6-Pase activity tern than its parent primary tumor. The morphol- resembled the primary ethionine-induced neo- ogy and biochemistry of this neoplasm in vivo and plasms and cytologically could be classified as a in vitro will be discussed more extensively in a hepatoma of the large-celled variety (~5). On the further publication. 2 The absence of G-6-Pase ac- tivity in the Novikoff hepatoma has been pre- viously reported (~9). 3- ASSAY: Glutamate dehydrogenase.--The activities of this GLUCOSE- 6- PO4--,- z~ 1600 enzyme in the same series of hepatomas are seen in l.-- GLUCOSE + PO4 Chart ~. As with the G-6-Pase, the Morris hepa- toma 51~3, the ethionine-induced primary and o 1200 t2_ transplanted hepatomas, and one hepatoma in- duced by 3'-Me-DAB consistently showed signifi- 800 cant amounts of the enzyme.
Recommended publications
  • W W W .Bio Visio N .Co M New Products Added in 2020
    New products added in 2020 Please find below a list of all the products added to our portfolio in the year 2020. Assay Kits Product Name Cat. No. Size Product Name Cat. No. Size N-Acetylcysteine Assay Kit (F) K2044 100 assays Human GAPDH Activity Assay Kit II K2047 100 assays Adeno-Associated Virus qPCR Quantification Kit K1473 100 Rxns Human GAPDH Inhibitor Screening Kit (C) K2043 100 assays 20 Preps, Adenovirus Purification Kit K1459 Hydroxyurea Colorimetric Assay Kit K2046 100 assays 100 Preps Iodide Colorimetric Assay Kit K2037 100 assays Aldehyde Dehydrogenase 2 Inhibitor Screening Kit (F) K2011 100 assays Laccase Activity Assay Kit (C) K2038 100 assays Aldehyde Dehydrogenase 3A1 Inhibitor Screening Kit (F) K2060 100 assays 20 Preps, Lentivirus and Retrovirus Purification Kit K1458 Alkaline Phosphatase Staining Kit K2035 50 assays 100 Preps Alpha-Mannosidase Activity Assay Kit (F) K2041 100 assays Instant Lentivirus Detection Card K1470 10 tests, 20 tests Beta-Mannosidase Activity Assay Kit (F) K2045 100 assays Lentivirus qPCR Quantification Kit K1471 100 Rxns 50 Preps, Buccal Swab DNA Purification Kit K1466 Maleimide Activated KLH-Peptide Conjugation Kit K2039 5 columns 250 Preps Methionine Adenosyltransferase Activity Assay Kit (C) K2033 100 assays CD38 Activity Assay Kit (F) K2042 100 assays miRNA Extraction Kit K1456 50 Preps EZCell™ CFDA SE Cell Tracer Kit K2057 200 assays MMP-13 Inhibitor Screening Kit (F) K2067 100 assays Choline Oxidase Activity Assay Kit (F) K2052 100 assays Mycoplasma PCR Detection Kit K1476 100 Rxns Coronavirus
    [Show full text]
  • Western Blot Sandwich ELISA Immunohistochemistry
    $$ 250 - 150 - 100 - 75 - 50 - 37 - Western Blot 25 - 20 - 15 - 10 - 1.4 1.2 1 0.8 0.6 OD 450 0.4 Sandwich ELISA 0.2 0 0.01 0.1 1 10 100 1000 Recombinant Protein Concentration(mg/ml) Immunohistochemistry Immunofluorescence 1 2 3 250 - 150 - 100 - 75 - 50 - Immunoprecipitation 37 - 25 - 20 - 15 - 100 80 60 % of Max 40 Flow Cytometry 20 0 3 4 5 0 102 10 10 10 www.abnova.com June 2013 (Fourth Edition) 37 38 53 Cat. Num. Product Name Cat. Num. Product Name MAB5411 A1/A2 monoclonal antibody, clone Z2A MAB3882 Adenovirus type 6 monoclonal antibody, clone 143 MAB0794 A1BG monoclonal antibody, clone 54B12 H00000126-D01 ADH1C MaxPab rabbit polyclonal antibody (D01) H00000002-D01 A2M MaxPab rabbit polyclonal antibody (D01) H00000127-D01 ADH4 MaxPab rabbit polyclonal antibody (D01) MAB0759 A2M monoclonal antibody, clone 3D1 H00000131-D01 ADH7 MaxPab rabbit polyclonal antibody (D01) MAB0758 A2M monoclonal antibody, clone 9A3 PAB0005 ADIPOQ polyclonal antibody H00051166-D01 AADAT MaxPab rabbit polyclonal antibody (D01) PAB0006 Adipoq polyclonal antibody H00000016-D01 AARS MaxPab rabbit polyclonal antibody (D01) PAB5030 ADIPOQ polyclonal antibody MAB8772 ABCA1 monoclonal antibody, clone AB.H10 PAB5031 ADIPOQ polyclonal antibody MAB8291 ABCA1 monoclonal antibody, clone AB1.G6 PAB5069 Adipoq polyclonal antibody MAB3345 ABCB1 monoclonal antibody, clone MRK16 PAB5070 Adipoq polyclonal antibody MAB3389 ABCC1 monoclonal antibody, clone QCRL-2 PAB5124 Adipoq polyclonal antibody MAB5157 ABCC1 monoclonal antibody, clone QCRL-3 PAB9125 ADIPOQ polyclonal antibody
    [Show full text]
  • Inactivation of Choline Oxidase by Irreversible Inhibitors Or Storage Conditions
    Georgia State University ScholarWorks @ Georgia State University Chemistry Theses Department of Chemistry 8-3-2006 Inactivation of Choline Oxidase by Irreversible Inhibitors or Storage Conditions Jane Vu Hoang [email protected] Follow this and additional works at: https://scholarworks.gsu.edu/chemistry_theses Recommended Citation Hoang, Jane Vu, "Inactivation of Choline Oxidase by Irreversible Inhibitors or Storage Conditions." Thesis, Georgia State University, 2006. https://scholarworks.gsu.edu/chemistry_theses/4 This Thesis is brought to you for free and open access by the Department of Chemistry at ScholarWorks @ Georgia State University. It has been accepted for inclusion in Chemistry Theses by an authorized administrator of ScholarWorks @ Georgia State University. For more information, please contact [email protected]. INACTIVATION OF CHOLINE OXIDASE BY IRREVERSIBLE INHIBITORS OR STORAGE CONDITIONS by JANE V. HOANG Under the Direction of Giovanni Gadda ABSTRACT Choline oxidase from Arthrobacter globiformis is a flavin-dependent enzyme that catalyzes the oxidation of choline to betaine aldehyde through two sequential hydride-transfer steps. The study of this enzyme is of importance to the understanding of glycine betaine biosynthesis found in pathogenic bacterial or economic relevant crop plants as a response to temperature and salt stress in adverse environment. In this study, chemical modification of choline oxidase using two irreversible inhibitors, tetranitromethane and phenylhydrazine, was performed in order to gain insights into the active site structure of the enzyme. Choline oxidase can also be inactivated irreversibly by freezing in 20 mM sodium phosphate and 20 mM sodium pyrophosphate at pH 6 and -20 oC. The results showed that enzyme inactivation was due to a localized conformational change associated with the ionization of a group in close proximity to the flavin cofactor and led to a complete lost of catalytic activity.
    [Show full text]
  • The Toxic Effects of Oxygen on Brain Metabolism and on Tissue Enzymes 2
    Vol. 40 OXYGEN POISONING OF BRAIN TISSUE 171 Meyer, A. L. (1927). Amer. J. Phy8iol. 82, 370. Reiman, C. K. & Minot, A. S. (1920). J. biol. Chem. 42, 329. Michaelis, M. & Quastel, J. H. (1941). Biochem. J. 85, 518. Schales, 0. (1938). Ber. dtsch. chem. Ge8. 71, 447. Ochoa, S. (1939). Nature, Lond., 144, 834. Sollmann, T. H. (1942). Manual of Pharmacology, 6th -ed. Ochoa, S. (1943). J. biol. Chem. 151, 493. New York: Saunders. Penfield, W. & Erickson, T. C. (1941). Epilep8y and Cerebral Soskin, S. & Taubenhaus, M. (1943). J. Pharmacol. 78, 49. Localization. London: Baillibre, Tindall and Cox. Stadie, W. C. (1943). Personal communication. Peters, R. A. (1940). Personal communication. Stadie, W. C. & Riggs, B. C. (1944). J. biol. Chem. 154, 687. Potter, V. R. & Elvehjem, C. A. (1936). J. biol. Chem. 114, Stadie, W. C., Riggs, B. C. & Haugaard, N. (1944). Amer. J. 495. med. Sci. 207, 84. Quastel, J. H. (1939). Phy8iol. Rev. 19, 135. Still, J. L. (1941). Biochem. J. 35, 380. Quastel, J. H. (1943). Personal communication. Warburg, 0. (1930). The Metabolism of Tumours (trans. Quastel, J. H. & Wheatley, A. H. M. (1932). Biochem. J. F. Dickens). London: Constable and Co. 26, 725. Weil-Malherbe, H. (1938). Biochem. J. 32, 2257. The Toxic Effects of Oxygen on Brain Metabolism and on Tissue Enzymes 2. TISSUE ENZYMES BY F. DICKENS, National In8titute for Medical Research, London, N. W. 3, and Cancer Research Laboratory, Royal Victoria Infirmary, Newcastle-upon-Tyne (Received 23 October 1945) The evidence in Part 1 (Dickens, 1946) enables the present paper, some general evidence is collected following working hypothesis of the mode of action on the mode of inactivation by oxygen ofsome other of oxygen on brain metabolism to be advanced enzymes, particularly those which, like pyruvate with some confidence.
    [Show full text]
  • Choline Oxidase from Alcaligenes Sp
    Choline Oxidase from Alcaligenes sp. Catalog Number C5896 Storage Temperature –20 C CAS RN 9028-67-5 Preparation Instructions EC 1.1.3.17 Solutions of choline oxidase may be prepared in 10 mM Synonym: Choline:oxygen 1-oxidoreductase Trizma-HCl, pH 8.0, with 2.0 mM EDTA and 134 mM KCl. One publication cites preparation of 2 mg/mL Product Description stock solutions of choline oxidase in carbonate buffer.5 Choline oxidase is a flavoprotein, and is a member of the GMC-oxidoreductase family. Choline oxidase Storage/Stability catalyzes the four-electron-oxidation of choline to Solution stability was measured as a plot of activity glycine betaine via the intermediate betaine aldehyde,2 versus time for an enzyme concentration of 1.0 mg/mL in two sequential FAD-dependent reaction steps. in 0.1 M potassium phosphate buffer, pH 7.5, at 37 C. Choline oxidase can be used for the enzymatic Approximately 75% of the enzymatic activity remained determination of phospholipids by coupling with after 16 hours. In the presence of 10 mM EDTA or phospholipase D and for cholinesterase activity 0.5 mg/mL BSA, approximately 90% enzymatic activity 3.4 assays. remains. Addition of both EDTA and BSA resulted in nearly 100% enzymatic activity remaining after Inhibitors of choline oxidase include p-chloromercuri- 16 hours. benzoate, and various metal ions such as Cu, Co, Hg, and Ag. References 1. Ohta-Fukuyama, M. et al., J. Biochem., 88(1), 197- pH optimum: 8.0–8.5 203 (1980). One publication indicates that choline oxidase from 2.
    [Show full text]
  • Purification and Characterization of Choline Oxidase from Arthrobacter Globiformis
    J. Biochem. 82, 1741-1749 (1977) Purification and Characterization of Choline Oxidase from Arthrobacter globiformis Shigeru IKUTA, Shigeyuki IMAMURA, Hideo MISAKI, and Yoshifumi HORIUTI Research Laboratory, Toyo Jozo Co., Ltd., Mifuku, Ohito-cho, Tagata-gun, Shizuoka 410-23 Received for publication, June 7, 1977 Choline oxidase was purified from the cells of Arthrobacter globiformis by fractionations with acetone and ammonium sulfate, and column chromatographies on DEAE-cellulose and on Sephadex G-200. The purified enzyme preparation appeared homogeneous on disc gel electrophoresis. The enzyme was a flavoprotein having a molecular weight of approx. 83,000 (gel filtration) or approx. 71,000 (sodium dodecyl sulfate-polyacrylamide disc gel electro phoresis) and an isoelectric point (pl) around pH 4.5. Identification of the reaction products showed that the enzyme catalyzed the following reactions: choline+02betaine aldehyde+ H202, betaine aldehyde+02+H2O-betaine+H202. The enzyme was highly specific for choline and betaine aldehyde (relative reaction veloc ities: choline, 100%; betaine aldehyde, 46%; N,N-dimethylaminoethanol, 5.2%; triethanol amine, 2.6%; diethanolamine, 0.8%; monoethanolamine, N-methylaminoethanol, methanol, ethanol, propanol, formaldehyde, acetaldehyde, and propionaldehyde, 0%). Its Km values were 1.2 mM for choline and 8.7 mM for betaine aldehyde. The optimum pH for the enzymic reaction was around pH 7.5. In a previous report from this laboratory (1), the existence of choline oxidase was discussed in relation MATERIALS AND METHODS to the oxidative pathway of choline to betaine found in A. globiformis cells. The enzyme ap Culture of the Bacterium-Cells of A. glo peared to catalyze the oxidations of both choline biformis were grown aerobically in culture medium and betaine aldehyde coupled with H202 generation for 40 h, as described previously (1).
    [Show full text]
  • Juan R. Carro Aramburu DOCTORAL THESIS 2017 Supervisors: Ángel T
    Facultad de Ciencias Biológicas Departamento de Bioquímica The glucose-methanol-choline (GMC) superfamily of enzymes is composed y Biología Molecular I of FAD-containing, phylogenetically-related proteins that share a common fold. Some fungal oxidoreductases from this superfamily play a role as auxiliary enzymes in the lignocellulose-degrading process. Most of them produce the H2O2 required: (i) by high redox potential peroxidases to act on lignin; or (ii) to trigger Fenton reactions that give rise to radical oxygen species that attack lignocellulose. In this Thesis, H2O2-producing GMC oxidoreductases have been studied, with special emphasis on aryl-alcohol oxidase (AAO) from the fungus Pleurotus eryngii, from genomic, mechanistic and biotechnological points of view. Nuevas oxidorreductasas GMC de basidiomicetos ligninolíticos: Screening genómico, mecanismo catalítico y potencial biotecnológico New GMC oxidoreductases from ligninolytic basidiomycetes: Genomic screening, catalytic mechanism and biotechnological potential DOCTORAL Juan Rogelio Carro Aramburu THESIS Juan R. Carro Aramburu DOCTORAL THESIS 2017 Supervisors: Ángel T. Martínez Ferrer Patricia Ferreira Neila Madrid, 2017 NEW GMC OXIDOREDUCTASES FROM LIGNINOLYTIC BASIDIOMYCETES: GENOMIC SCREENING, CATALYTIC MECHANISM AND BIOTECHNOLOGICAL POTENTIAL Thesis submitted by Juan Rogelio Carro Aramburu for the fulfilment of the requirements for the degree of doctor (Ph.D.) in the Universidad Complutense de Madrid Supervisors: Dr. Ángel T. Martínez Ferrer Dra. Patricia Ferreira Neila Profesor
    [Show full text]
  • Kinetic and Structural Studies on Flavin-Dependent Enzymes Involved in Glycine Betaine Biosynthesis and Propionate 3-Nitronate Detoxification
    Georgia State University ScholarWorks @ Georgia State University Chemistry Dissertations Department of Chemistry Spring 5-11-2015 Kinetic and Structural Studies on Flavin-dependent Enzymes involved in Glycine Betaine Biosynthesis and Propionate 3-nitronate Detoxification Francesca Salvi Follow this and additional works at: https://scholarworks.gsu.edu/chemistry_diss Recommended Citation Salvi, Francesca, "Kinetic and Structural Studies on Flavin-dependent Enzymes involved in Glycine Betaine Biosynthesis and Propionate 3-nitronate Detoxification." Dissertation, Georgia State University, 2015. https://scholarworks.gsu.edu/chemistry_diss/106 This Dissertation is brought to you for free and open access by the Department of Chemistry at ScholarWorks @ Georgia State University. It has been accepted for inclusion in Chemistry Dissertations by an authorized administrator of ScholarWorks @ Georgia State University. For more information, please contact [email protected]. KINETIC AND STRUCTURAL STUDIES ON FLAVIN-DEPENDENT ENZYMES INVOLVED IN GLYCINE BETAINE BIOSYNTHESIS AND PROPIONATE 3-NITRONATE DETOXIFICATION by FRANCESCA SALVI Under the Direction of Giovanni Gadda, PhD ABSTRACT Flavin-dependent enzymes are characterized by an amazing chemical versatility and play important roles in different cellular pathways. The FAD-containing choline oxidase from Arthrobacter globiformis oxidizes choline to glycine betaine and retains the intermediate betaine aldehyde in the active site. The reduced FAD is oxidized by oxygen. Glycine betaine is an important osmoprotectant accumulated by bacteria, plants, and animals in response to stress conditions. The FMN-containing nitronate monooxygenase detoxifies the deadly toxin propionate 3-nitronate which is produced by plants and fungi as defense mechanism against herbivores. The catalytic mechanism of fungal nitronate monooxygenase (NMO) was characterized, but little is known about bacterial NMOs.
    [Show full text]
  • Role of Peroxidase in Clinical Assays: a Short Review
    Review Article iMedPub Journals Journal of Clinical Nutrition & Dietetics 2017 http://www.imedpub.com ISSN 2472-1921 Vol. 3 No. 2: 14 DOI: 10.4172/2472-1921.100048 Role of Peroxidase in Clinical Anantharaman Shivakumar, Jashmitha BG and Assays: A Short Review Dhruvaraj MR PG Department of Chemistry, St. Philomena’s College, Mysore-570015, Abstract Karnataka, India Development of sensitive enzymatic methods for hydrogen peroxide is key for the quantification of several bioconstituents such as glucose, triglycerides, creatinine, and uric acid and so on. Hydrogen peroxide released by the oxidase enzymes Corresponding author: Dr. Shivakumar A are quantified by peroxidase enzyme involving spectrophotometry, fluorimetry, chemiluminisence, potentiometric sensing, amperometric, coulometric and such [email protected] others. Authors in this line, present a short review on the assay of peroxidase. The entire review is divided into three different sections; first the importance of Assistant Professor, PG Department peroxidase clinically, secondly peroxidase chemistry with hydrogen peroxide and of Chemistry, St. Philomena’s College, finally its role in the assay of bioconstituents. Bangalore-Mysore Road, Bannimantap, Keywords: Peroxidase; Clinical importance; Oxidase enzymes; Glucose assay; Mysore-570 015, Karnataka, India. Nano sensors Tel: 0821 424 0900 Received: May 03, 2017; Accepted: May 09, 2017; Published: May 12, 2017 Citation: Shivakumar A, Jashmitha BG, Dhruvaraj MR. Role of Peroxidase in Clinical Peroxidase: A Clinically Important Assays: A Short Review. J Clin Nutr Diet. Enzyme 2017, 3:2. Peroxidases are widely distributed in nature especially in animal and plant cells. Peroxidases comprise of three major categories; into oxidative dehydrogenation, oxygen transfer, oxidative plant peroxidases, animal peroxidases and catalases.
    [Show full text]
  • (12) United States Patent (10) Patent No.: US 7,163,616 B2 Vreelke Et Al
    USOO71636.16B2 (12) United States Patent (10) Patent No.: US 7,163,616 B2 Vreelke et al. (45) Date of Patent: Jan. 16, 2007 (54) REAGENTS AND METHODS FOR (56) References Cited DETECTING ANALYTES, AND DEVICES U.S. PATENT DOCUMENTS COMPRISING REAGENTS FOR DETECTING ANALYTES 4,545,382 A 10/1985 Higgins et al. ............. 128,635 4,711,245 A 12/1987 Higgins et al. ... ... 128,635 4,863,016 A 9/1989 Fong et al. ........... ... 206,210 4.941,308 A 7, 1990 Grabenkort et al. .......... 53.425 (75) Inventors: Mark S. Vreeke, Houston, TX (US); 5, 120,420 A 6/1992 Nankai et al. .............. 204,403 Mary Ellen Warchal-Windham, 5,206,147 A 4, 1993 Hoenes ............. ... 435/25 Osceola, IN (US); Christina Blaschke, 5,212,092 A 5/1993 Jackson et al. ............... 436/11 White Pigeon, MI (US); Barbara J. 5,236,567 A 8/1993 Nanba et al. ............... 204,403 Mikel, Mishawaka, IN (US); Howard (Continued) A. Cooper, Elkhart, IN (US) FOREIGN PATENT DOCUMENTS (73) Assignee: Bayer Corporation, Elkhart, IN (US) EP O 330 517 A 8, 1989 (Continued) (*) Notice: Subject to any disclaimer, the term of this patent is extended or adjusted under 35 OTHER PUBLICATIONS U.S.C. 154(b) by 102 days. Taylor, C.; Kenausis, G.; Katakis, I.; Heller, A.; “Wiring” of glucose oxidase within a hydrogel made with polyvinyl imidazole complexed with Ox-4,4'-dimethoxy-2,2'-bipyridin)CI+2+, Jour (21) Appl. No.: 10/231,539 nal of Electroanalytical Chemistry, 1995, vol. 396, pp. 511-515.* (Continued) (22) Filed: Sep.
    [Show full text]
  • Sigma Enzymes, Coenzymes and Enzyme Substrates
    Sigma Enzymes, Coenzymes and Enzyme Substrates Library Listing – 485 spectra This library represents a material-specific subset of the larger Sigma Biochemical Condensed Phase Library relating to enzymes, coenzymes and enzyme substrates found in the Sigma Biochemicals and Reagents catalog. Spectra acquired by Sigma-Aldrich Co. which were examined and processed at Thermo Fisher Scientific. The spectra include compound name, molecular formula, CAS (Chemical Abstract Service) registry number, and Sigma catalog number. Sigma Enzymes, Coenzymes and Enzyme Substrates Index Compound Name Index Compound Name 484 (E)-Vaccenoyl coenzyme A 294 Avidin-rhodamine isothiocyanate powder 483 (Z)-Vaccenoyl coenzyme A 298 Azo soybean flour 400 1,N6-Etheno acetyl coenzyme A, Li salt 295 Azoalbumin 401 1,N6-Etheno coenzyme A, Na + Li salt 296 Azocasein 397 11,14,17-Eicosatrienoyl coenzyme A 297 Azocoll 396 11,14-Eicosadienoyl coenzyme A 379 Behenoyl coenzyme A 395 11-Eicosaenoyl coenzyme A 380 Benzoyl coenzyme A, Li salt 321 2-(b-D-Galactosidoxy)naphthol AS-LC 343 Bis-(p-nitrophenyl) phosphate 394 3'-Dephosphocoenzyme A 344 Bis-(p-nitrophenyl) phosphate, Ca salt 370 3-Acetylpyridine adenine dinucleotide 345 Bis-(p-nitrophenyl) phosphate, Na salt 372 3-Acetylpyridine adenine dinucleotide 381 Brassidoyl coenzyme A phosphate, Na salt 9 Carbamate kinase from streptococcus 371 3-Acetylpyridine adenine dinucleotide, faecalis reduced form 310 Carbamyl phosphate, diammonium salt 373 3-Acetylpyridine-hypoxanthine 311 Carbamyl phosphate, dilithium salt dinucleotide
    [Show full text]
  • Springer Handbook of Enzymes
    Dietmar Schomburg Ida Schomburg (Eds.) Springer Handbook of Enzymes Alphabetical Name Index 1 23 © Springer-Verlag Berlin Heidelberg New York 2010 This work is subject to copyright. All rights reserved, whether in whole or part of the material con- cerned, specifically the right of translation, printing and reprinting, reproduction and storage in data- bases. The publisher cannot assume any legal responsibility for given data. Commercial distribution is only permitted with the publishers written consent. Springer Handbook of Enzymes, Vols. 1–39 + Supplements 1–7, Name Index 2.4.1.60 abequosyltransferase, Vol. 31, p. 468 2.7.1.157 N-acetylgalactosamine kinase, Vol. S2, p. 268 4.2.3.18 abietadiene synthase, Vol. S7,p.276 3.1.6.12 N-acetylgalactosamine-4-sulfatase, Vol. 11, p. 300 1.14.13.93 (+)-abscisic acid 8’-hydroxylase, Vol. S1, p. 602 3.1.6.4 N-acetylgalactosamine-6-sulfatase, Vol. 11, p. 267 1.2.3.14 abscisic-aldehyde oxidase, Vol. S1, p. 176 3.2.1.49 a-N-acetylgalactosaminidase, Vol. 13,p.10 1.2.1.10 acetaldehyde dehydrogenase (acetylating), Vol. 20, 3.2.1.53 b-N-acetylgalactosaminidase, Vol. 13,p.91 p. 115 2.4.99.3 a-N-acetylgalactosaminide a-2,6-sialyltransferase, 3.5.1.63 4-acetamidobutyrate deacetylase, Vol. 14,p.528 Vol. 33,p.335 3.5.1.51 4-acetamidobutyryl-CoA deacetylase, Vol. 14, 2.4.1.147 acetylgalactosaminyl-O-glycosyl-glycoprotein b- p. 482 1,3-N-acetylglucosaminyltransferase, Vol. 32, 3.5.1.29 2-(acetamidomethylene)succinate hydrolase, p. 287 Vol.
    [Show full text]