The Toxic Effects of Oxygen on Brain Metabolism and on Tissue Enzymes 2

Total Page:16

File Type:pdf, Size:1020Kb

The Toxic Effects of Oxygen on Brain Metabolism and on Tissue Enzymes 2 Vol. 40 OXYGEN POISONING OF BRAIN TISSUE 171 Meyer, A. L. (1927). Amer. J. Phy8iol. 82, 370. Reiman, C. K. & Minot, A. S. (1920). J. biol. Chem. 42, 329. Michaelis, M. & Quastel, J. H. (1941). Biochem. J. 85, 518. Schales, 0. (1938). Ber. dtsch. chem. Ge8. 71, 447. Ochoa, S. (1939). Nature, Lond., 144, 834. Sollmann, T. H. (1942). Manual of Pharmacology, 6th -ed. Ochoa, S. (1943). J. biol. Chem. 151, 493. New York: Saunders. Penfield, W. & Erickson, T. C. (1941). Epilep8y and Cerebral Soskin, S. & Taubenhaus, M. (1943). J. Pharmacol. 78, 49. Localization. London: Baillibre, Tindall and Cox. Stadie, W. C. (1943). Personal communication. Peters, R. A. (1940). Personal communication. Stadie, W. C. & Riggs, B. C. (1944). J. biol. Chem. 154, 687. Potter, V. R. & Elvehjem, C. A. (1936). J. biol. Chem. 114, Stadie, W. C., Riggs, B. C. & Haugaard, N. (1944). Amer. J. 495. med. Sci. 207, 84. Quastel, J. H. (1939). Phy8iol. Rev. 19, 135. Still, J. L. (1941). Biochem. J. 35, 380. Quastel, J. H. (1943). Personal communication. Warburg, 0. (1930). The Metabolism of Tumours (trans. Quastel, J. H. & Wheatley, A. H. M. (1932). Biochem. J. F. Dickens). London: Constable and Co. 26, 725. Weil-Malherbe, H. (1938). Biochem. J. 32, 2257. The Toxic Effects of Oxygen on Brain Metabolism and on Tissue Enzymes 2. TISSUE ENZYMES BY F. DICKENS, National In8titute for Medical Research, London, N. W. 3, and Cancer Research Laboratory, Royal Victoria Infirmary, Newcastle-upon-Tyne (Received 23 October 1945) The evidence in Part 1 (Dickens, 1946) enables the present paper, some general evidence is collected following working hypothesis of the mode of action on the mode of inactivation by oxygen ofsome other of oxygen on brain metabolism to be advanced enzymes, particularly those which, like pyruvate with some confidence. oxidase, may play a part in brain metabolism. These (1) Exposure to unphysiologically high tensions ofoxygen experiments are of a preliminary and exploratory causes irreversible damage to brain respiration and gly- character, and serve mainly to define some con- colysis. ditions under which this type of inhibition may be (2) This damage is sustained by the enzymes themselves expected to occur, and to investigate some examples rather than by their coenzymes, as shown by the lack of of protection against oxygen poisoning in enzyme general protection in presence of excess of the more im- systems. portant coenzymes. (3) The following conditions tend to protect against The general nature of the inactivation oxygen poisoning: Presence of (a) glucose or (as shown in of enzymes by oxygen this paper) manganese ions, which protect succinoxidase in finely divided brain tissue; (b) ions of manganese, cobalt, A list has been compiled of enzymes known to be or magnesium (and probably calcium), which protect the sensitive to oxygen, or capable of inactivation by whole oxidative system in brain slices, with decreasing comparatively mild oxidants, and therefore open to activity in the order of the above series. the suspicion of being oxygen-sensitive under the (4) The brain enzymes poisoned by oxygen are mainly right conditions (Table 1). These observations were those concerned in carbohydrate metabolism. Oxidation widely scattered, and probably others could be ofglucose, fructose, lactate and pyruvate is inhibited, while the succinoxidase system, at least in intact tissue (slices) added: the only review found to bear on this subject, is much more resistant. There is support for the view that apart from the excellent one by Stadie, Riggs & the inactivation of an -SH component of the pyruvate Haugaard (1944) which appeared after this work oxidase system may be a primary stage in oxygen poisoning, was completed, is that of Hellerman (1937), which the resulting interference with resynthesis of adenosine is limited to hydrolytic enzymes. As this author triphosphate could then lead to general breakdown of rightly remarks: 'In most enzyme studies, the effect aerobic and anaerobic carbohydrate metabolism. of an ever present reagent, the oxygen of the air, (5) It is, however, not excluded that, in addition to the has been generally neglected.' pyruvate oxidase, another and earlier stage of carbohydrate There is another reason why such a list is in- metabolism might be inhibited, thus poisoning directly the oxidation of and fructose. evitably incomplete, and that is the enormous effect glucose on oxygen susceptibility of traces of contaminants, It is hoped later to study the effect of oxygen on especially -SH compounds and metallic ions, but components of the pyruvic oxidase system. In the also other substances less well defined. The following 172 F. DICKENS I946 typical experiences are quoted as excellent examples Table 1 (cont.) of the extraordinary complexity of the oxygen Enzyme poisoning of enzyme systems: nature* Enzyme class Authority B. Inactivation by exposure to oxygen under special cir- (a) Urea8e. Perlzweig (1932) showed that aeration of cumstances, or by mild oxidants: preservation by -SR crystalline urease weakened its action, and believed this compounds. (Less satisfactory evidence than the pre- ceding.) Table 1. Enzyme8 8en8&tive to oxygen or to mild oxidants -SH (?) Myokinase Kalckar (1943) Enzyme -SH Transaminase Cohen, Hekhius & nature* Enzyme class Authority Sober (1942) A. Inactivation by exposure to gaseous oxygen (or air) -SH Triosephosphate Rapkine (1938), Rap- dehydrogenase kine & Trpinac (1939) (a) Proteolytic M Zymohexase (of Warburg & Christian -SH Cathepsin: tissue Bailey, Belfer, Eder & autolysis Bradley (1942) yeast)t (1942) -SH (?) Cerebrosidase Hellerman (1937, -SH Papain Hellerman (1937) p. 466) -SH Proteases, Peptidase Irving, Fruton & Berg- * mann Enzyme nature. -SH indicates evidence that an (1942) intact sulphydryl group is considered necessary for activity. (b) Hydrolytic ('deamidizing') X indicates that the enzyme either contains a metal as M Arginase Edlbacher, Kraus & part of its prosthetic group, or requires metallic ions for Leuthardt (1933), its activity. F indicates that the enzyme contains a flavo- Hellerman (1937) protein. (The first and second of these classes are often combined; both an -SH group and an activating metal -SH Urease Perlzweig (1932), Sum- being necessary. The classification of some of these enzymes ner & Poland (1933) cannot be considered as final.) (c) Fe-porphyrins t Zymohexase of animal tissues shows only inhibition by metallic ions, and is stable to oxidants (Herbert, Gordon, M Hydrogenase Steephenson & Stickland Subrahmanyan & Green, 1940). (1 1931), Hobermann & Rtittenberg (1943) to be due to removal of a sulphydryl component by oxida- M 'Pasteur enzyme' WEarburg (1926), Stern tion. The still more highly purified enzyme is, however, Melnick (1941) practically insensitive to the action of air, but is rendered M Catalase Mairks, G. W. (1936) sensitive again on the addition of minute amounts of copper (Eprolonged experi- salts (Hellerman, Perkins & Clark, 1933). maents) (b) Arginase behaves very similarly: cruder preparations M Cytochrome oxidase Diickens (this paper) are readily inactivated by oxygen, while purified ones are (d) Oxidases, etc. much less sensitive, or completely insensitive (Edlbacher, Pyruvic oxidase Bairron (1936), Mann Kraus & Leuthardt, 1933; Klein & Zeise, 1933, 1935). Quastel (1946), Arginase preparations are activated by metallic ions (Mn, D)ickens (1946) Fe, Co, Ni, Zn, Cd, and possibly others-cf. Richards -SH Succinoxidase Le,hmann, J. (1935), & Hellerman, 1940). Hellerman (1937) believes that the LiEebricht & Massart action of these metals is to form co-ordination compounds (19937), Bohr & Bean linking the enzyme molecule with that of the substrate. (19p40-1), Stadie (1943), (e) Pho8phoglucomutawe. This enzyme, which is necessary Diickens (this paper) for breakdown and synthesis of glycogen, is of peculiar -SH Choline oxidase Diickens (this paper) interest, since the present work has shown that at different of it can exhibit a wide variation of F Xanthine oxidase Di zxon (1925), Dixon & stages purification KCodama (1926) sensitivity to air. F d-Amino-acid oxidase StEladie (1943) Gill & Lehmann (1939) showed that there was a very slight increase in the amount of Robison-ester formed from F Cytochrome-c reduc- Haaas, Horecker & Hog- glycogen by muscle extract when the experiment was made tase ness (1940): (possibly) in absence of air. ? Fatty acid dehydro- Shapiro & Wertheimer Like many other oxygen-sensitive enzymes, phospho- genase (]1943) glucomutase is highly susceptible to the influence of traces -SH Triosephosphate de- Dickens (this paper) of metals; cobalt, magnesium and manganese strongly hydrogenase accelerate, nickel feebly so, and zinc retards the activity ? Formic acid dehydro- Gale (1939) of the enzyme. Concentrated solutions of reduced gluta- genase thione and oxidized glutathione respectively, accelerate, (e) Phosphorases and retard its activity (Cori, Colowick & Cori, 1938; Gill -SR Phosphoglucomutase Gill & Lehmann (1939), & Lehmann, 1939; Lehmann, 1939; and present work). Dickens (this paper) Although these properties suggest a direct connexion be- -SH (?) Neuberg ester phos- Engelhardt & Sakov tween oxido-reduction potential and activity, the relation- phorase (phospho- (1943) ship is, in fact, involved, e.g. substances such as insulin glucokinase) or caffeine are also inhibitory. The best way ofcircumventing V91. 40 OXYGEN POISONING OF ENZYMES 173 the experimental difficulties has in practice proved to be: of sensitivity of these enzymes on their
Recommended publications
  • Crystallization of Malonic and Succinic Acids on Sams: Toward the General Mechanism of Oriented Nucleation on Organic Monolayers†
    pubs.acs.org/Langmuir © 2009 American Chemical Society Crystallization of Malonic and Succinic Acids on SAMs: Toward the General Mechanism of Oriented Nucleation on Organic Monolayers† Boaz Pokroy,‡ Victoria Fay Chernow, and Joanna Aizenberg* School of Engineering and Applied Sciences, Department of Chemistry and Chemical Biology, Harvard University, Cambridge, Massachusetts 02138. ‡ Current address: Department of Materials Engineering, Israel Institute of Technology, Haifa 32000, Israel. Received July 25, 2009. Revised Manuscript Received September 2, 2009 Self-assembled monolayers (SAMs) were shown to induce very specific oriented growth of simple organic and inorganic crystals. Here we present a detailed study of the mechanism by which SAMs control the oriented nucleation by examining a more complex case of crystallization of bifunctional organic molecules. Malonic and succinic acids were grown on the SAMs of HS(CH2)10CO2H and HS(CH2)11CO2H supported on gold films. Each SAM induced a very controlled, specific orientation of the crystals. The preferred nucleating planes always exhibited an alignment of one of the carboxylic acid groups in the molecules of the growing crystal with the carboxylic acid groups on the surface of the SAMs. These results suggest that the translation of the structural information through the interface occurs by stereochemical registry such that the functional groups in the SAM play the role of an oriented surrogate layer for the nucleating crystal. These findings are very important to the understanding of the underlying principles by which various organic surfaces;and most probably also biological templates;control the crystallization process. Introduction templates to control the formation of both organic and inorganic An understanding of crystal nucleation and growth and the materials.
    [Show full text]
  • Succinic Acid
    ENVIRONMENTAL FACTSHEET: SUCCINIC ACID PRODUCT INFORMATION Succinic acid (COOH(CH2)2COOH) is a carboxylic acid used in food (as an acidulant), pharmaceutical (as an excipient), personal care (soaps) and chemical (pesticides, dyes and lacquers) industries. Bio-based succinic acid is seen as an important platform chemical for the production of biodegradable plastics and as a substitute of several chemicals (such as adipic acid) [1]. Lignocellulosic Crops and Starch Crops Sugar Crops Today succinic acid is mainly produced Type of Type Biomass Residues from fossil resources through maleic acid hydrogenation. It can also be produced through fermentation of sugars. In that Cultivation and Harvesting case, in addition to succinic acid, other Biomass carboxylic acids (such as lactic acid, formic Production acid, propionic acid) and alcohols (such as ethanol) are also obtained. The production Starch Sugar Pretreatment Extraction & Extraction & ratios of these by-product compounds Separation Separation depend on the microorganism strain used and on the operation conditions. Several Hemicellulose Food Food Feed companies and industrial consortiums Lignin Cellulose Starch Feed Saccharose started bio-based production of succinic acid at demonstration scale (up to 70 ktonnes/year of full capacity, per Hydrolysis production plant [2]). Two strategies are being used for succinic acid fermentation [1]: (1) Use of bacteria strains, isolated Glucose from rumen. This strains are excellent Biomass Conversion Biomass natural succinic acid producers and their yields can be improved, though metabolic engineering; (2) Use of well-known Fermentation industrial microorganisms (such as Escherichia coli or Saccharomyces cervisiae) and modify their minor succinic acid production capability into high yields Succinic Acid through metabolic engineering.
    [Show full text]
  • Tricarboxylic Acid (TCA) Cycle Intermediates: Regulators of Immune Responses
    life Review Tricarboxylic Acid (TCA) Cycle Intermediates: Regulators of Immune Responses Inseok Choi , Hyewon Son and Jea-Hyun Baek * School of Life Science, Handong Global University, Pohang, Gyeongbuk 37554, Korea; [email protected] (I.C.); [email protected] (H.S.) * Correspondence: [email protected]; Tel.: +82-54-260-1347 Abstract: The tricarboxylic acid cycle (TCA) is a series of chemical reactions used in aerobic organisms to generate energy via the oxidation of acetylcoenzyme A (CoA) derived from carbohydrates, fatty acids and proteins. In the eukaryotic system, the TCA cycle occurs completely in mitochondria, while the intermediates of the TCA cycle are retained inside mitochondria due to their polarity and hydrophilicity. Under cell stress conditions, mitochondria can become disrupted and release their contents, which act as danger signals in the cytosol. Of note, the TCA cycle intermediates may also leak from dysfunctioning mitochondria and regulate cellular processes. Increasing evidence shows that the metabolites of the TCA cycle are substantially involved in the regulation of immune responses. In this review, we aimed to provide a comprehensive systematic overview of the molecular mechanisms of each TCA cycle intermediate that may play key roles in regulating cellular immunity in cell stress and discuss its implication for immune activation and suppression. Keywords: Krebs cycle; tricarboxylic acid cycle; cellular immunity; immunometabolism 1. Introduction The tricarboxylic acid cycle (TCA, also known as the Krebs cycle or the citric acid Citation: Choi, I.; Son, H.; Baek, J.-H. Tricarboxylic Acid (TCA) Cycle cycle) is a series of chemical reactions used in aerobic organisms (pro- and eukaryotes) to Intermediates: Regulators of Immune generate energy via the oxidation of acetyl-coenzyme A (CoA) derived from carbohydrates, Responses.
    [Show full text]
  • W W W .Bio Visio N .Co M New Products Added in 2020
    New products added in 2020 Please find below a list of all the products added to our portfolio in the year 2020. Assay Kits Product Name Cat. No. Size Product Name Cat. No. Size N-Acetylcysteine Assay Kit (F) K2044 100 assays Human GAPDH Activity Assay Kit II K2047 100 assays Adeno-Associated Virus qPCR Quantification Kit K1473 100 Rxns Human GAPDH Inhibitor Screening Kit (C) K2043 100 assays 20 Preps, Adenovirus Purification Kit K1459 Hydroxyurea Colorimetric Assay Kit K2046 100 assays 100 Preps Iodide Colorimetric Assay Kit K2037 100 assays Aldehyde Dehydrogenase 2 Inhibitor Screening Kit (F) K2011 100 assays Laccase Activity Assay Kit (C) K2038 100 assays Aldehyde Dehydrogenase 3A1 Inhibitor Screening Kit (F) K2060 100 assays 20 Preps, Lentivirus and Retrovirus Purification Kit K1458 Alkaline Phosphatase Staining Kit K2035 50 assays 100 Preps Alpha-Mannosidase Activity Assay Kit (F) K2041 100 assays Instant Lentivirus Detection Card K1470 10 tests, 20 tests Beta-Mannosidase Activity Assay Kit (F) K2045 100 assays Lentivirus qPCR Quantification Kit K1471 100 Rxns 50 Preps, Buccal Swab DNA Purification Kit K1466 Maleimide Activated KLH-Peptide Conjugation Kit K2039 5 columns 250 Preps Methionine Adenosyltransferase Activity Assay Kit (C) K2033 100 assays CD38 Activity Assay Kit (F) K2042 100 assays miRNA Extraction Kit K1456 50 Preps EZCell™ CFDA SE Cell Tracer Kit K2057 200 assays MMP-13 Inhibitor Screening Kit (F) K2067 100 assays Choline Oxidase Activity Assay Kit (F) K2052 100 assays Mycoplasma PCR Detection Kit K1476 100 Rxns Coronavirus
    [Show full text]
  • Production of Succinic Acid by E.Coli from Mixtures of Glucose
    2005:230 CIV MASTER’S THESIS Production of Succinic Acid by E. coli from Mixtures of Glucose and Fructose ANDREAS LENNARTSSON MASTER OF SCIENCE PROGRAMME Chemical Engineering Luleå University of Technology Department of Chemical Engineering and Geosciences Division of Biochemical and Chemical Engineering 2005:230 CIV • ISSN: 1402 - 1617 • ISRN: LTU - EX - - 05/230 - - SE Abstract Succinic acid, derived from fermentation of renewable feedstocks, has the possibility of replacing petrochemicals as a building block chemical. Another interesting advantage with biobased succinic acid is that the production does not contribute to the accumulation of CO2 to the environment. The produced succinic acid can therefore be considered as a “green” chemical. The bacterium used in this project is a strain of Escherichia coli called AFP184 that has been metabolically engineered to produce succinic acid in large quantities from glucose during anaerobic conditions. The objective with this thesis work was to evaluate whether AFP184 can utilise fructose, both alone and in mixtures with glucose, as a carbon source for the production of succinic acid. Hydrolysis of sucrose yields a mixture of fructose and glucose in equal ratio. Sucrose is a common sugar and the hydrolysate is therefore an interesting feedstock for the production of succinic acid. Fermentations with an initial sugar concentration of 100 g/L were conducted. The sugar ratios used were 100 % fructose, 100 % glucose and a mixture with 50 % fructose and glucose, respectively. The fermentation media used was a lean, low- cost media based on corn steep liquor and a minimal addition of inorganic salts. Fermentations were performed with a 12 L bioreactor and the acid and sugar concentrations were analysed with an HPLC system.
    [Show full text]
  • The Comparative Enzymology and Cell Origin of Rat Hepatomas II
    The Comparative Enzymology and Cell Origin of Rat Hepatomas II. Glutamate Dehydrogenase, Choline Oxidase, and Glucose-6-phosphatase* HENRY C. PITOT~ (McArdle Memorial Laboratory, The Medical School, University of Wisconsin, Madison, Wis.) SUMMARY The activities of glucose-6-phosphatase, glutamate dehydrogcnase, and choline ox[- dase were determined in some or all of ten rat hepatomas, including the Novikoff, Dunning L-C18, McCoy MDAB, and the Morris 3683, 39524A, and 51~3 hepatomas, together with primary hepatomas produced by feeding ethionine or 3%nethyl-4- dimethylaminoazobenzene, and transplanted hepatomas derived from the primary tumors induced with ethionine. Of these neoplasms, only the Morris hepatoma 51~3, the primary and transplanted ethionine-induced hepatomas, and one of the 3'-methyl-4-dimethylaminoazobenzene- induced tumors possessed significant glucose-6-phosphatase activity. These same tu- mors in addition to the Dunning L-C18 hepatoma had demonstrable glutamate dehydro- genase activity, whereas the other neoplasms tested failed to show significant activity of this enzyme. With the exception of the primary dye-induced neoplasm, which was not tested, only those neoplasms having significant glucose-6-phosphatase activities showed any choline oxidase activity. Of those neoplasms tested for tryptophan peroxidase activity only the Morris hepa- toma 51~3, the primary ethionine-induced hepatoma, and some of the Dunning L-C18 hepatomas had any demonstrable activity of this enzyme. In contrast to most of the enzymatic activities reported here, the threonine dehydrase activity of the Morris hepatoma 51r was of the order of 40 times the level of this enzyme in the livers of animals bearing this tumor.
    [Show full text]
  • BIO-BASED SUCCINIC ACID by Sudeep Vaswani (December 2010)
    PEP Review 2010-14 BIO-BASED SUCCINIC ACID By Sudeep Vaswani (December 2010) ABSTRACT In a U.S. Department of Energy report published in 2004, succinic acid was identified as one of the top twelve building-block chemicals that could be produced from renewable feedstocks. Currently, succinic acid uses a petroleum-derived maleic anhydride route for its production, which is both costly and environmentally unfriendly. As a result, there is a growing interest towards discovering a more economical and environmentally cleaner way for its production. One methodology that has been receiving increased attention is the use of bacterial microorganisms. This technology takes advantage of the fermentative capabilities of various microorganisms and utilizes a renewable substrate as a carbon source for acid formation. Succinic acid production from microbial organisms has tremendous potential as a building block for commodity chemicals with applications in several industries. Some of the succinic acid derivatives include: tetrahydrofuran (THF), 1,4-butanediol (BDO), succindiamide, succinonitrile, dimethylsuccinate, N-methyl-pyrrolidone, 2-pyrrolidone, and 1,4-diaminobutane. This PEP Review discusses and provides a detailed techno-economic analysis for bio-based succinic acid production with a capacity of 82.7 million lb/year (37,500 mt/yr). Additionally, it covers information regarding genetic engineering mechanisms, regulation of specific enzymes, and purification of succinic acid to provide a cost-competitive alternative to fossil fuels. © SRI Consulting PEP Review 2010-14 A private report by the Process Economics Program Review No. 2010-14 BIO-BASED SUCCINIC ACID by Sudeep Vaswani December 2010 Menlo Park, California 94025 SRIC agrees to assign professionally qualified personnel to the preparation of the Process Economics Program’s reports and will perform the work in conformance with generally accepted professional standards.
    [Show full text]
  • Western Blot Sandwich ELISA Immunohistochemistry
    $$ 250 - 150 - 100 - 75 - 50 - 37 - Western Blot 25 - 20 - 15 - 10 - 1.4 1.2 1 0.8 0.6 OD 450 0.4 Sandwich ELISA 0.2 0 0.01 0.1 1 10 100 1000 Recombinant Protein Concentration(mg/ml) Immunohistochemistry Immunofluorescence 1 2 3 250 - 150 - 100 - 75 - 50 - Immunoprecipitation 37 - 25 - 20 - 15 - 100 80 60 % of Max 40 Flow Cytometry 20 0 3 4 5 0 102 10 10 10 www.abnova.com June 2013 (Fourth Edition) 37 38 53 Cat. Num. Product Name Cat. Num. Product Name MAB5411 A1/A2 monoclonal antibody, clone Z2A MAB3882 Adenovirus type 6 monoclonal antibody, clone 143 MAB0794 A1BG monoclonal antibody, clone 54B12 H00000126-D01 ADH1C MaxPab rabbit polyclonal antibody (D01) H00000002-D01 A2M MaxPab rabbit polyclonal antibody (D01) H00000127-D01 ADH4 MaxPab rabbit polyclonal antibody (D01) MAB0759 A2M monoclonal antibody, clone 3D1 H00000131-D01 ADH7 MaxPab rabbit polyclonal antibody (D01) MAB0758 A2M monoclonal antibody, clone 9A3 PAB0005 ADIPOQ polyclonal antibody H00051166-D01 AADAT MaxPab rabbit polyclonal antibody (D01) PAB0006 Adipoq polyclonal antibody H00000016-D01 AARS MaxPab rabbit polyclonal antibody (D01) PAB5030 ADIPOQ polyclonal antibody MAB8772 ABCA1 monoclonal antibody, clone AB.H10 PAB5031 ADIPOQ polyclonal antibody MAB8291 ABCA1 monoclonal antibody, clone AB1.G6 PAB5069 Adipoq polyclonal antibody MAB3345 ABCB1 monoclonal antibody, clone MRK16 PAB5070 Adipoq polyclonal antibody MAB3389 ABCC1 monoclonal antibody, clone QCRL-2 PAB5124 Adipoq polyclonal antibody MAB5157 ABCC1 monoclonal antibody, clone QCRL-3 PAB9125 ADIPOQ polyclonal antibody
    [Show full text]
  • Production of Malonic Acid Through the Fermentation of Glucose
    University of Pennsylvania ScholarlyCommons Department of Chemical & Biomolecular Senior Design Reports (CBE) Engineering 4-20-2018 Production of Malonic Acid through the Fermentation of Glucose Emily P. Peters University of Pennsylvania, [email protected] Gabrielle J. Schlakman University of Pennsylvania, [email protected] Elise N. Yang University of Pennsylvania, [email protected] Follow this and additional works at: https://repository.upenn.edu/cbe_sdr Part of the Biochemical and Biomolecular Engineering Commons Peters, Emily P.; Schlakman, Gabrielle J.; and Yang, Elise N., "Production of Malonic Acid through the Fermentation of Glucose" (2018). Senior Design Reports (CBE). 107. https://repository.upenn.edu/cbe_sdr/107 This paper is posted at ScholarlyCommons. https://repository.upenn.edu/cbe_sdr/107 For more information, please contact [email protected]. Production of Malonic Acid through the Fermentation of Glucose Abstract The overall process to produce malonic acid has not drastically changed in the past 50 years. The current process is damaging to the environment and costly, requiring high market prices. Lygos, Inc., a lab in Berkeley, California, has published a patent describing a way to produce malonic acid through the biological fermentation of genetically modified easty cells. This proposed technology is appealing as it is both better for the environment and economically friendly. For the process discussed in this report, genetically modified Pichia Kudriavzevii yeast cells will be purchased from the Lygos lab along with the negotiation of exclusive licensing rights to the technology. The cells will be grown in fermentation vessels, while being constantly fed oxygen, glucose and fermentation media. The cells will excrete malonic acid in the 101 hour fermentation process.
    [Show full text]
  • Interpretive Guide
    INTERPRETIVE GUIDE Contents INTRODUCTION .........................................................................1 NUTREVAL BIOMARKERS ...........................................................5 Metabolic Analysis Markers ....................................................5 Malabsorption and Dysbiosis Markers .....................................5 Cellular Energy & Mitochondrial Metabolites ..........................6 Neurotransmitter Metabolites ...............................................8 Vitamin Markers ....................................................................9 Toxin & Detoxification Markers ..............................................9 Amino Acids ..........................................................................10 Essential and Metabolic Fatty Acids .........................................13 Cardiovascular Risk ................................................................15 Oxidative Stress Markers ........................................................16 Elemental Markers ................................................................17 Toxic Elements .......................................................................18 INTERPRETATION-AT-A-GLANCE .................................................19 REFERENCES .............................................................................23 INTRODUCTION A shortage of any nutrient can lead to biochemical NutrEval profile evaluates several important biochemical disturbances that affect healthy cellular and tissue pathways to help determine nutrient
    [Show full text]
  • Inactivation of Choline Oxidase by Irreversible Inhibitors Or Storage Conditions
    Georgia State University ScholarWorks @ Georgia State University Chemistry Theses Department of Chemistry 8-3-2006 Inactivation of Choline Oxidase by Irreversible Inhibitors or Storage Conditions Jane Vu Hoang [email protected] Follow this and additional works at: https://scholarworks.gsu.edu/chemistry_theses Recommended Citation Hoang, Jane Vu, "Inactivation of Choline Oxidase by Irreversible Inhibitors or Storage Conditions." Thesis, Georgia State University, 2006. https://scholarworks.gsu.edu/chemistry_theses/4 This Thesis is brought to you for free and open access by the Department of Chemistry at ScholarWorks @ Georgia State University. It has been accepted for inclusion in Chemistry Theses by an authorized administrator of ScholarWorks @ Georgia State University. For more information, please contact [email protected]. INACTIVATION OF CHOLINE OXIDASE BY IRREVERSIBLE INHIBITORS OR STORAGE CONDITIONS by JANE V. HOANG Under the Direction of Giovanni Gadda ABSTRACT Choline oxidase from Arthrobacter globiformis is a flavin-dependent enzyme that catalyzes the oxidation of choline to betaine aldehyde through two sequential hydride-transfer steps. The study of this enzyme is of importance to the understanding of glycine betaine biosynthesis found in pathogenic bacterial or economic relevant crop plants as a response to temperature and salt stress in adverse environment. In this study, chemical modification of choline oxidase using two irreversible inhibitors, tetranitromethane and phenylhydrazine, was performed in order to gain insights into the active site structure of the enzyme. Choline oxidase can also be inactivated irreversibly by freezing in 20 mM sodium phosphate and 20 mM sodium pyrophosphate at pH 6 and -20 oC. The results showed that enzyme inactivation was due to a localized conformational change associated with the ionization of a group in close proximity to the flavin cofactor and led to a complete lost of catalytic activity.
    [Show full text]
  • Choline Oxidase from Alcaligenes Sp
    Choline Oxidase from Alcaligenes sp. Catalog Number C5896 Storage Temperature –20 C CAS RN 9028-67-5 Preparation Instructions EC 1.1.3.17 Solutions of choline oxidase may be prepared in 10 mM Synonym: Choline:oxygen 1-oxidoreductase Trizma-HCl, pH 8.0, with 2.0 mM EDTA and 134 mM KCl. One publication cites preparation of 2 mg/mL Product Description stock solutions of choline oxidase in carbonate buffer.5 Choline oxidase is a flavoprotein, and is a member of the GMC-oxidoreductase family. Choline oxidase Storage/Stability catalyzes the four-electron-oxidation of choline to Solution stability was measured as a plot of activity glycine betaine via the intermediate betaine aldehyde,2 versus time for an enzyme concentration of 1.0 mg/mL in two sequential FAD-dependent reaction steps. in 0.1 M potassium phosphate buffer, pH 7.5, at 37 C. Choline oxidase can be used for the enzymatic Approximately 75% of the enzymatic activity remained determination of phospholipids by coupling with after 16 hours. In the presence of 10 mM EDTA or phospholipase D and for cholinesterase activity 0.5 mg/mL BSA, approximately 90% enzymatic activity 3.4 assays. remains. Addition of both EDTA and BSA resulted in nearly 100% enzymatic activity remaining after Inhibitors of choline oxidase include p-chloromercuri- 16 hours. benzoate, and various metal ions such as Cu, Co, Hg, and Ag. References 1. Ohta-Fukuyama, M. et al., J. Biochem., 88(1), 197- pH optimum: 8.0–8.5 203 (1980). One publication indicates that choline oxidase from 2.
    [Show full text]