Isotopic Evidence for Phytoplankton As Amajor Food Source for Macrobenthos on an Intertidal Sandflat in Ariake Sound, Japan
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Taxonomic Research of the Gobioid Fishes (Perciformes: Gobioidei) in China
KOREAN JOURNAL OF ICHTHYOLOGY, Vol. 21 Supplement, 63-72, July 2009 Received : April 17, 2009 ISSN: 1225-8598 Revised : June 15, 2009 Accepted : July 13, 2009 Taxonomic Research of the Gobioid Fishes (Perciformes: Gobioidei) in China By Han-Lin Wu, Jun-Sheng Zhong1,* and I-Shiung Chen2 Ichthyological Laboratory, Shanghai Ocean University, 999 Hucheng Ring Rd., 201306 Shanghai, China 1Ichthyological Laboratory, Shanghai Ocean University, 999 Hucheng Ring Rd., 201306 Shanghai, China 2Institute of Marine Biology, National Taiwan Ocean University, Keelung 202, Taiwan ABSTRACT The taxonomic research based on extensive investigations and specimen collections throughout all varieties of freshwater and marine habitats of Chinese waters, including mainland China, Hong Kong and Taiwan, which involved accounting the vast number of collected specimens, data and literature (both within and outside China) were carried out over the last 40 years. There are totally 361 recorded species of gobioid fishes belonging to 113 genera, 5 subfamilies, and 9 families. This gobioid fauna of China comprises 16.2% of 2211 known living gobioid species of the world. This report repre- sents a summary of previous researches on the suborder Gobioidei. A recently diagnosed subfamily, Polyspondylogobiinae, were assigned from the type genus and type species: Polyspondylogobius sinen- sis Kimura & Wu, 1994 which collected around the Pearl River Delta with high extremity of vertebral count up to 52-54. The undated comprehensive checklist of gobioid fishes in China will be provided in this paper. Key words : Gobioid fish, fish taxonomy, species checklist, China, Hong Kong, Taiwan INTRODUCTION benthic perciforms: gobioid fishes to evolve and active- ly radiate. The fishes of suborder Gobioidei belong to the largest The gobioid fishes in China have long received little group of those in present living Perciformes. -
Training Manual Series No.15/2018
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by CMFRI Digital Repository DBTR-H D Indian Council of Agricultural Research Ministry of Science and Technology Central Marine Fisheries Research Institute Department of Biotechnology CMFRI Training Manual Series No.15/2018 Training Manual In the frame work of the project: DBT sponsored Three Months National Training in Molecular Biology and Biotechnology for Fisheries Professionals 2015-18 Training Manual In the frame work of the project: DBT sponsored Three Months National Training in Molecular Biology and Biotechnology for Fisheries Professionals 2015-18 Training Manual This is a limited edition of the CMFRI Training Manual provided to participants of the “DBT sponsored Three Months National Training in Molecular Biology and Biotechnology for Fisheries Professionals” organized by the Marine Biotechnology Division of Central Marine Fisheries Research Institute (CMFRI), from 2nd February 2015 - 31st March 2018. Principal Investigator Dr. P. Vijayagopal Compiled & Edited by Dr. P. Vijayagopal Dr. Reynold Peter Assisted by Aditya Prabhakar Swetha Dhamodharan P V ISBN 978-93-82263-24-1 CMFRI Training Manual Series No.15/2018 Published by Dr A Gopalakrishnan Director, Central Marine Fisheries Research Institute (ICAR-CMFRI) Central Marine Fisheries Research Institute PB.No:1603, Ernakulam North P.O, Kochi-682018, India. 2 Foreword Central Marine Fisheries Research Institute (CMFRI), Kochi along with CIFE, Mumbai and CIFA, Bhubaneswar within the Indian Council of Agricultural Research (ICAR) and Department of Biotechnology of Government of India organized a series of training programs entitled “DBT sponsored Three Months National Training in Molecular Biology and Biotechnology for Fisheries Professionals”. -
Complete Sequence of the Mitochondrial Genome of Odontamblyopus Rubicundus (Perciformes: Gobiidae): Genome Characterization and Phylogenetic Analysis
c Indian Academy of Sciences RESEARCH ARTICLE Complete sequence of the mitochondrial genome of Odontamblyopus rubicundus (Perciformes: Gobiidae): genome characterization and phylogenetic analysis TIANXING LIU, XIAOXIAO JIN, RIXIN WANG∗ and TIANJUN XU∗ Laboratory for Marine Living Resources and Molecular Engineering, College of Marine Science, Zhejiang Ocean University, Zhoushan 316000, People’s Republic of China Abstract Odontamblyopus rubicundus is a species of gobiid fishes, inhabits muddy-bottomed coastal waters. In this paper, the first complete mitochondrial genome sequence of O. rubicundus is reported. The complete mitochondrial genome sequence is 17119 bp in length and contains 13 protein-coding genes, two rRNA genes, 22 tRNA genes, a control region and an L-strand origin as in other teleosts. Most mitochondrial genes are encoded on H-strand except for ND6 and seven tRNA genes. Some overlaps occur in protein-coding genes and tRNAs ranging from 1 to 7 bp. The possibly nonfunctional L-strand origin folded into a typical stem-loop secondary structure and a conserved motif (5-GCCGG-3) was found at the base of the stem within the tRNACys gene. The TAS, CSB-2 and CSB-3 could be detected in the control region. However, in contrast to most of other fishes, the central conserved sequence block domain and the CSB-1 could not be recognized in O. rubicundus,whichis consistent with Acanthogobius hasta (Gobiidae). In addition, phylogenetic analyses based on different sequences of species of Gobiidae and different methods showed that the classification of O. rubicundus into Odontamblyopus due to morphology is debatable. [Liu T., Jin X., Wang R. and Xu T. -
Mating Behavior of the Dioecious Snail Cerithidea Rhizophorarum A.Adams,1855 ( Gastropoda; Potamididae) in the Tidal Flat of a Mangrove Forest
Biogeography 18. 1–10. Sep. 20, 2016 Mating behavior of the dioecious snail Cerithidea rhizophorarum A.Adams,1855 ( Gastropoda; Potamididae) in the tidal flat of a mangrove forest Harumi Ohtaki, Kiyonori Tomiyama, Eiko Maki, Maya Takeuchi, Tatsujiro Suzuka & Saki Fukudome Department of Earth and Environmental Sciences, Graduate School of Science and Engineering, Kagoshima University, Korimoto, Kagoshima, 890-0065, Japan Abstract. The mating behavior of the dioecious snail Cerithidea rhizophorarum was observed in the field. Copulation was observed from mid May to mid September, with a peak from late June to late July. Continu- ation of copulation was confirmed by flag mark, pair was discovered on rounds every 15 minutes. The time pair parted from one another was considered the copulation termination time; both initial and termination times were recorded. Initial times in the daytime had one peak period about two and a half hours before low tide, while nighttime pairs starting copulation were especially frequent over three hours, with low tide oc- curring in the middle of that period. Copulation frequency in the daytime and nighttime was much the same, but the duration of copulation in the nighttime (mean 51.1minutes) was significantly longer than that in the daytime (26.7minutes). Because there was no significant correlation between shell width between pairs, the mating of C. rhizophorarum was assumed to be random with respect to shell width. Courtship acceptor snails were significantly bigger than initiator snails. By dissection of copulation pairs, 5.45% of the pairs were found to be between individuals having male reproductive organs. The difference in sex ratio between the population on the tidal flat area and on the trees in the summer was significant: the ratio of females in the population on the trees was higher than that on the tidal flat area. -
Distribution and Status of the Introduced Red-Eared Slider (Trachemys Scripta Elegans) in Taiwan 187 T.-H
Assessment and Control of Biological Invasion Risks Compiled and Edited by Fumito Koike, Mick N. Clout, Mieko Kawamichi, Maj De Poorter and Kunio Iwatsuki With the assistance of Keiji Iwasaki, Nobuo Ishii, Nobuo Morimoto, Koichi Goka, Mitsuhiko Takahashi as reviewing committee, and Takeo Kawamichi and Carola Warner in editorial works. The papers published in this book are the outcome of the International Conference on Assessment and Control of Biological Invasion Risks held at the Yokohama National University, 26 to 29 August 2004. The designation of geographical entities in this book, and the presentation of the material, do not imply the expression of any opinion whatsoever on the part of IUCN concerning the legal status of any country, territory, or area, or of its authorities, or concerning the delimitation of its frontiers or boundaries. The views expressed in this publication do not necessarily reflect those of IUCN. Publication of this book was aided by grants from the 21st century COE program of Japan Society for Promotion of Science, Keidanren Nature Conservation Fund, the Japan Fund for Global Environment of the Environmental Restoration and Conservation Agency, Expo’90 Foundation and the Fund in the Memory of Mr. Tomoyuki Kouhara. Published by: SHOUKADOH Book Sellers, Japan and the World Conservation Union (IUCN), Switzerland Copyright: ©2006 Biodiversity Network Japan Reproduction of this publication for educational or other non-commercial purposes is authorised without prior written permission from the copyright holder provided the source is fully acknowledged and the copyright holder receives a copy of the reproduced material. Reproduction of this publication for resale or other commercial purposes is prohibited without prior written permission of the copyright holder. -
National Report on the Fish Stocks and Habitats of Regional, Global
United Nations UNEP/GEF South China Sea Global Environment Environment Programme Project Facility NATIONAL REPORT on The Fish Stocks and Habitats of Regional, Global, and Transboundary Significance in the South China Sea THAILAND Mr. Pirochana Saikliang Focal Point for Fisheries Chumphon Marine Fisheries Research and Development Center 408 Moo 8, Paknum Sub-District, Muang District, Chumphon 86120, Thailand NATIONAL REPORT ON FISHERIES – THAILAND Table of Contents 1. MARINE FISHERIES DEVELOPMENT........................................................................................2 / 1.1 OVERVIEW OF THE FISHERIES SECTOR ...................................................................................2 1.1.1 Total catch by fishing area, port of landing or province (by species/species group).7 1.1.2 Fishing effort by gear (no. of fishing days, or no. of boats) .......................................7 1.1.2.1 Trawl ...........................................................................................................10 1.1.2.2 Purse seine/ring net....................................................................................10 1.1.2.3 Gill net.........................................................................................................12 1.1.2.4 Other gears.................................................................................................12 1.1.3 Economic value of catch..........................................................................................14 1.1.4 Importance of the fisheries sector -
Complete Mitochondrial Genomes of Two Toxin-Accumulated Nassariids (Neogastropoda: Nassariidae: Nassarius) and Their Implication for Phylogeny
International Journal of Molecular Sciences Article Complete Mitochondrial Genomes of Two Toxin-Accumulated Nassariids (Neogastropoda: Nassariidae: Nassarius) and Their Implication for Phylogeny Yi Yang 1, Hongyue Liu 1, Lu Qi 1, Lingfeng Kong 1 and Qi Li 1,2,* 1 Key Laboratory of Mariculture, Ministry of Education, Ocean University of China, Qingdao 266003, China; [email protected] (Y.Y.); [email protected] (H.L.); [email protected] (L.Q.); [email protected] (L.K.) 2 Laboratory for Marine Fisheries Science and Food Production Processes, Qingdao National Laboratory for Marine Science and Technology, 1 Wenhai Road, Aoshanwei Town, Qingdao 266237, China * Correspondence: [email protected]; Tel.: +86-532-8203-2773 Received: 30 March 2020; Accepted: 12 May 2020; Published: 17 May 2020 Abstract: The Indo-Pacific nassariids (genus Nassarius) possesses the highest diversity within the family Nassariidae. However, the previous shell or radula-based classification of Nassarius is quite confusing due to the homoplasy of certain morphological characteristics. The toxin accumulators Nassarius glans and Nassarius siquijorensis are widely distributed in the subtidal regions of the Indo-Pacific Ocean. In spite of their biological significance, the phylogenetic positions of N. glans and N. siquijorensis are still undetermined. In the present study, the complete mitochondrial genomes of N. glans and N. siquijorensis were sequenced. The present mitochondrial genomes were 15,296 and 15,337 bp in length, respectively, showing negative AT skews and positive GC skews as well as a bias of AT rich on the heavy strand. They contained 13 protein coding genes, 22 transfer RNA genes, two ribosomal RNA genes, and several noncoding regions, and their gene order was identical to most caenogastropods. -
The Use of Molluscan Fauna As Model Taxon for the Ecological Classification of River Estuaries
water Article The Use of Molluscan Fauna as Model Taxon for the Ecological Classification of River Estuaries Rei Itsukushima 1,*, Kai Morita 2 and Yukihiro Shimatani 2 1 Department of Decision Science for a Sustainable Society, Kyushu University, 744, Motooka, Nishi-ku, Fukuoka 819-0395, Japan 2 Department of Urban and Environmental Engineering, Kyushu University, 744 Motooka, Nishi-ku, Fukuoka 819-0395, Japan; [email protected] (K.M.); [email protected] (Y.S.) * Correspondence: [email protected]; Tel.: +81-92-802-3419; Fax: +81-92-802-3438 Academic Editor: Luc Lambs Received: 21 March 2017; Accepted: 9 May 2017; Published: 18 May 2017 Abstract: River estuaries are important aquatic environments characterized by large environmental gradients in their water quality, riverbed material, and microtopography in the longitudinal and transverse directions. The geography or habitats in river estuaries differ depending on the energy from the tide, waves, and river; therefore, the biota inhabiting river estuaries vary depending on the river estuary type. In view of this, for effective conservation in river estuaries, there is a need for information about potential habitats and biota based on objective data about the river estuary type. The objective of this study thus was to classify river estuaries by their molluscan fauna and physical indicators to reveal the relationship between molluscan fauna and the physical environment. The classification results using physical indicators indicated three types of river estuaries (wave energy-dominated group, tide energy-dominated group, and low tide and wave energy group). This classification result was similar to the classification of molluscan fauna. -
Journal of Threatened Taxa
PLATINUM The Journal of Threatened Taxa (JoTT) is dedicated to building evidence for conservaton globally by publishing peer-reviewed artcles OPEN ACCESS online every month at a reasonably rapid rate at www.threatenedtaxa.org. All artcles published in JoTT are registered under Creatve Commons Atributon 4.0 Internatonal License unless otherwise mentoned. JoTT allows unrestricted use, reproducton, and distributon of artcles in any medium by providing adequate credit to the author(s) and the source of publicaton. Journal of Threatened Taxa Building evidence for conservaton globally www.threatenedtaxa.org ISSN 0974-7907 (Online) | ISSN 0974-7893 (Print) Communication An overview of fishes of the Sundarbans, Bangladesh and their present conservation status Kazi Ahsan Habib, Amit Kumer Neogi, Najmun Nahar, Jina Oh, Youn-Ho Lee & Choong-Gon Kim 26 January 2020 | Vol. 12 | No. 1 | Pages: 15154–15172 DOI: 10.11609/jot.4893.12.1.15154-15172 For Focus, Scope, Aims, Policies, and Guidelines visit htps://threatenedtaxa.org/index.php/JoTT/about/editorialPolicies#custom-0 For Artcle Submission Guidelines, visit htps://threatenedtaxa.org/index.php/JoTT/about/submissions#onlineSubmissions For Policies against Scientfc Misconduct, visit htps://threatenedtaxa.org/index.php/JoTT/about/editorialPolicies#custom-2 For reprints, contact <[email protected]> The opinions expressed by the authors do not refect the views of the Journal of Threatened Taxa, Wildlife Informaton Liaison Development Society, Zoo Outreach Organizaton, or any of the partners. The -
Burrow Structure and Utilization of Periophthalmodon Schlosseri (Pallas, 1770) from Tran De Coastal Area, Soc Trang, Vietnam
Egyptian Journal of Aquatic Biology & Fisheries Zoology Department, Faculty of Science, Ain Shams University, Cairo, Egypt. ISSN 1110 – 6131 Vol. 24(3): 45 – 52 (2020) www.ejabf.journals.ekb.eg Burrow structure and utilization of Periophthalmodon schlosseri (Pallas, 1770) from Tran De coastal area, Soc Trang, Vietnam Lam T. Tran1, Y T. N. Nguyen2, Tien T. K. Nguyen3, Quang M. Dinh2* 1. Department of Basic Science, Faculty of Education, Bac Lieu University, 8 ward, Bac Lieu city, Bac Lieu 910000, Vietnam 2. Department of Biology, School of Education, Can Tho University, Xuan Khanh ward, Ninh Kieu district, Can Tho 900000, Vietnam 3. An Khanh High School, An Khanh ward, Ninh Kieu district, Can Tho 900000, Vietnam *Corresponding Author: [email protected] ARTICLE INFO ABSTRACT Article History: This study was conducted from October 2017 to March 2018 in Mo O Received: April 16, 2020 territorial waters, Tran De district, Soc Trang province to contribute data of burrow Accepted: May 5, 2020 morphology and utilization of the species Periophthalmodon schlosseri that was one Online: May 7, 2020 of the important economical fish species in the Mekong Delta. The burrow _______________ morphology and dimensions were obtained by analyzing 30 casting burrows molded by polyester resin. The burrow utilization was determined by analyzing casting Keywords: burrows and observing activities of fish in its habitats. The analysis result showed Burrow, that burrows of this fish were various in shapes such as U, I, and J. The burrow had 1- Mekong Delta, 2 opening with large mound made from mud pellets, and 0-1 bulbous chamber. -
Building a DNA Barcode Library for the Freshwater Fishes of Bangladesh
www.nature.com/scientificreports Corrected: Publisher Correction OPEN Building a DNA barcode library for the freshwater fshes of Bangladesh Md. Mizanur Rahman1, Michael Norén2, Abdur Rob Mollah1 & Sven O. Kullander 2 We sequenced the standard DNA barcode gene fragment in 694 newly collected specimens, Received: 21 November 2018 representing 243 species level Operational Barcode Units (OBUs) of freshwater fshes from Bangladesh. Accepted: 3 June 2019 We produced coi sequences for 149 out of the 237 species already recorded from Bangladesh. Another Published online: 28 June 2019 83 species sequenced were not previously recorded for the country, and include about 30 undescribed or potentially undescribed species. Several of the taxa that we could not sample represent erroneous records for the country, or sporadic occurrences. Species identifcations were classifed at confdence levels 1(best) to 3 (worst). We propose the new term Operational Barcode Unit (OBU) to simplify references to would-be DNA barcode sequences and sequence clusters. We found one case where there were two mitochondrial lineages present in the same species, several cases of cryptic species, one case of introgression, one species yielding a pseudogene to standard barcoding primers, and several cases of taxonomic uncertainty and need for taxonomic revision. Large scale national level DNA barcode prospecting in high diversity regions may sufer from lack of taxonomic expertise that cripples the result. Consequently, DNA barcoding should be performed in the context of taxonomic revision, and have a defned, competent end-user. Fish and fsheries play an important role in Bangladesh’s economy, nutrition and culture. With 47 609 km2 of inland water bodies, it is the third inland fsh producing country in the world afer China and India1. -
An Annotated Checklist of Fishes of Amami-Oshima Island, the Ryukyu Islands, Japan
国立科博専報,(52), pp. 205–361 , 2018 年 3 月 28 日 Mem. Natl. Mus. Nat. Sci., Tokyo, (52), pp. 205–361, March 28, 2018 An Annotated Checklist of Fishes of Amami-oshima Island, the Ryukyu Islands, Japan Masanori Nakae1*, Hiroyuki Motomura2, Kiyoshi Hagiwara3, Hiroshi Senou4, Keita Koeda5, Tomohiro Yoshida67, Satokuni Tashiro6, Byeol Jeong6, Harutaka Hata6, Yoshino Fukui6, Kyoji Fujiwara8, Takeshi Yama kawa9, Masahiro Aizawa10, Gento Shino hara1 and Keiichi Matsuura1 1 Department of Zoology, National Museum of Nature and Science, 4–1–1 Amakubo Tsukuba, Ibaraki 305–0005, Japan *E-mail: [email protected] 2 The Kagoshima University Museum, 1–21–30 Korimoto, Kagoshima 890–0065, Japan 3 Yokosuka City Museum, 95 Fukada-dai, Yokosuka, Kanagawa 238–0016, Japan 4 Kanagawa Prefectural Museum of Natural History, 499 Iryuda, Odawara, Kanagawa 250–0031, Japan 5 National Museum of Marine Biology & Aquarium, 2 Houwan Road, Checheng, Pingtung, 94450, Taiwan 6 The United Graduate School of Agricultural Sciences, Kagoshima University, 1–21–24 Korimoto, Kagoshima 890–0065, Japan 7Seikai National Fisheries Research Institute, 1551–8 Taira-machi, Nagasaki 851–2213, Japan 8 Graduate School of Fisheries, Kagoshima University, 4–50–20 Shimoarata, Kagoshima 890–0056, Japan 9 955–7 Fukui, Kochi 780–0965, Japan 10 Imperial Household Agency, 1–1 Chiyoda, Chiyoda-ku, Tokyo 100–8111, Japan Abstract. A comprehensive list of fishes from Amami-oshima Island, the Ryukyu Islands, Japan, is reported for the first time on the basis of collected specimens and literature surveys. A total of 1615 species (618 genera, 175 families and 35 orders) are recorded with specimen registration numbers (if present), localities and literature references.