Vol. I October-December 1974 No. 2 Chzorosplenium and Its Segregates
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Preliminary Classification of Leotiomycetes
Mycosphere 10(1): 310–489 (2019) www.mycosphere.org ISSN 2077 7019 Article Doi 10.5943/mycosphere/10/1/7 Preliminary classification of Leotiomycetes Ekanayaka AH1,2, Hyde KD1,2, Gentekaki E2,3, McKenzie EHC4, Zhao Q1,*, Bulgakov TS5, Camporesi E6,7 1Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming 650201, Yunnan, China 2Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100, Thailand 3School of Science, Mae Fah Luang University, Chiang Rai, 57100, Thailand 4Landcare Research Manaaki Whenua, Private Bag 92170, Auckland, New Zealand 5Russian Research Institute of Floriculture and Subtropical Crops, 2/28 Yana Fabritsiusa Street, Sochi 354002, Krasnodar region, Russia 6A.M.B. Gruppo Micologico Forlivese “Antonio Cicognani”, Via Roma 18, Forlì, Italy. 7A.M.B. Circolo Micologico “Giovanni Carini”, C.P. 314 Brescia, Italy. Ekanayaka AH, Hyde KD, Gentekaki E, McKenzie EHC, Zhao Q, Bulgakov TS, Camporesi E 2019 – Preliminary classification of Leotiomycetes. Mycosphere 10(1), 310–489, Doi 10.5943/mycosphere/10/1/7 Abstract Leotiomycetes is regarded as the inoperculate class of discomycetes within the phylum Ascomycota. Taxa are mainly characterized by asci with a simple pore blueing in Melzer’s reagent, although some taxa have lost this character. The monophyly of this class has been verified in several recent molecular studies. However, circumscription of the orders, families and generic level delimitation are still unsettled. This paper provides a modified backbone tree for the class Leotiomycetes based on phylogenetic analysis of combined ITS, LSU, SSU, TEF, and RPB2 loci. In the phylogenetic analysis, Leotiomycetes separates into 19 clades, which can be recognized as orders and order-level clades. -
9B Taxonomy to Genus
Fungus and Lichen Genera in the NEMF Database Taxonomic hierarchy: phyllum > class (-etes) > order (-ales) > family (-ceae) > genus. Total number of genera in the database: 526 Anamorphic fungi (see p. 4), which are disseminated by propagules not formed from cells where meiosis has occurred, are presently not grouped by class, order, etc. Most propagules can be referred to as "conidia," but some are derived from unspecialized vegetative mycelium. A significant number are correlated with fungal states that produce spores derived from cells where meiosis has, or is assumed to have, occurred. These are, where known, members of the ascomycetes or basidiomycetes. However, in many cases, they are still undescribed, unrecognized or poorly known. (Explanation paraphrased from "Dictionary of the Fungi, 9th Edition.") Principal authority for this taxonomy is the Dictionary of the Fungi and its online database, www.indexfungorum.org. For lichens, see Lecanoromycetes on p. 3. Basidiomycota Aegerita Poria Macrolepiota Grandinia Poronidulus Melanophyllum Agaricomycetes Hyphoderma Postia Amanitaceae Cantharellales Meripilaceae Pycnoporellus Amanita Cantharellaceae Abortiporus Skeletocutis Bolbitiaceae Cantharellus Antrodia Trichaptum Agrocybe Craterellus Grifola Tyromyces Bolbitius Clavulinaceae Meripilus Sistotremataceae Conocybe Clavulina Physisporinus Trechispora Hebeloma Hydnaceae Meruliaceae Sparassidaceae Panaeolina Hydnum Climacodon Sparassis Clavariaceae Polyporales Gloeoporus Steccherinaceae Clavaria Albatrellaceae Hyphodermopsis Antrodiella -
MMA MASTERLIST - Sorted by Taxonomy
MMA MASTERLIST - Sorted by Taxonomy Sunday, December 10, 2017 Page 1 of 86 Amoebozoa Mycetomycota Protosteliomycetes Protosteliales Ceratiomyxaceae Ceratiomyxa fruticulosa Ceratiomyxa fruticulosa var. fruticulosa Ceratiomyxa fruticulosa var. poroides Ceratiomyxa sp. Mycetozoa Myxogastrea Incertae Sedis in Myxogastrea Liceaceae Licea minima Stemonitidaceae Brefeldia maxima Comatricha pulchella Comatricha sp. Comatricha typhoides Stemonitis axifera Stemonitis fusca Stemonitis sp. Stemonitis splendens Chromista Oomycota Incertae Sedis in Oomycota Peronosporales Peronosporaceae Plasmopara viticola Pythiaceae Pythium deBaryanum Oomycetes Saprolegniales Saprolegniaceae Saprolegnia sp. Peronosporea Albuginales Albuginaceae Albugo candida Fungus Ascomycota Ascomycetes Boliniales Boliniaceae Camarops petersii Capnodiales Capnodiaceae Scorias spongiosa Diaporthales Gnomoniaceae Cryptodiaporthe corni Sydowiellaceae Stegophora ulmea Valsaceae Cryphonectria parasitica Valsella nigroannulata Elaphomycetales Elaphomycetaceae Elaphomyces granulatus Elaphomyces sp. Erysiphales Erysiphaceae Erysiphe aggregata Erysiphe cichoracearum Erysiphe polygoni Microsphaera extensa Phyllactinia guttata Podosphaera clandestina Uncinula adunca Uncinula necator Hysteriales Hysteriaceae Glonium stellatum Leotiales Bulgariaceae Crinula caliciiformis Crinula sp. Mycocaliciales Mycocaliciaceae Phaeocalicium polyporaeum Peltigerales Collemataceae Leptogium cyanescens Lobariaceae Sticta fimbriata Nephromataceae Nephroma helveticum Peltigeraceae Peltigera evansiana Peltigera -
Prilozi Contributions
ISSN 1857–9027 e-ISSN 1857–9949 MAKEDONSKA AKADEMIJA NA NAUKITE I UMETNOSTITE ODDELENIE ZA PRIRODNO-MATEMATI^KI I BIOTEHNI^KI NAUKI MACEDONIAN ACADEMY OF SCIENCES AND ARTS SECTION OF NATURAL, MATHEMATICAL AND BIOTECHNICAL SCIENCES PRILOZI CONTRIBUTIONS 40 (2) СКОПЈЕ – SKOPJE 2019 Publisher: Macedonian Academy of Sciences and Arts Editor-in-Chief Gligor Jovanovski, Macedonia Guest editors Kiril Sotirovski, Macedonia Viktor Gjamovski, Macedonia Co-editor-in-Chief Dončo Dimovski, Macedonia E d i t o r i a l B o a r d: Sjur Baardsen, Norway Lars Lonnstedt, Sweden Ivan Blinkov, Macedonia Vlado Matevski, Macedonia Blažo Boev, Macedonia Dubravka Matković-Čalogović, Croatia Stevo Božinovski, USA Nenad Novkovski, Macedonia Mitrofan Cioban, Moldova Nikola Panov, Macedonia Andraž Čarni, Slovenia Shushma Patel, England Ludwik Dobrzynski, France Dejan Prelević, Germany Gjorgji Filipovski, Macedonia Kiril Sotirovski, Macedonia Viktor Gjamovski, Macedonia Hari M. Srivastava, Canada Marjan Gušev, Macedonia Ivo Šlaus, Croatia Gordan Karaman, Montenegro Bogdan Šolaja, Serbia Borislav Kobiljski, Serbia Franci Štampar, Slovenia Dénes Loczy, Hungary Petar Zhelev, Bulgaria * Editorial assistant: Sonja Malinovska * Macedonian language adviser: Sofija Cholakovska-Popovska * Technical editor: Sonja Malinovska * Printed by: MAR-SAZ – Skopje * Number of copies: 300 * 2019 Published twice a year The Contributions, Sec. Nat. Math. Biotech. Sci. is indexed in: Chemical Abstracts, Mathematical Reviews, Google Scholar, EBSCO and DOAJ http://manu.edu.mk/contributions/NMBSci/ Прилози, Одд. прир. мат. биотех. науки, МАНУ Том Бр. стр. Скопје 40 2 145–276 2019 Contributions, Sec. Nat. Math. Biotech. Sci., MASA Vol. No. pp. Skopje T ABL E O F CONTENTS Marjan Andreevski, Duško Mukaetov CONTENT OF EXCHANGEABLE CATIONS IN ALBIC LUVISOLS IN THE REPUBLIC OF MACEDONIA ........................................................................................................ -
Phylogeny of Cyttaria Inferred from Nuclear and Mitochondrial Sequence and Morphological Data
Phylogeny of Cyttaria inferred from nuclear and mitochondrial sequence and morphological data The Harvard community has made this article openly available. Please share how this access benefits you. Your story matters Citation Peterson, K. R., and D. H. Pfister. 2010. Phylogeny of Cyttaria Inferred from Nuclear and Mitochondrial Sequence and Morphological Data. Mycologia 102, no. 6: 1398–1416. doi:10.3852/10-046. Published Version doi:10.3852/10-046 Citable link http://nrs.harvard.edu/urn-3:HUL.InstRepos:30168159 Terms of Use This article was downloaded from Harvard University’s DASH repository, and is made available under the terms and conditions applicable to Other Posted Material, as set forth at http:// nrs.harvard.edu/urn-3:HUL.InstRepos:dash.current.terms-of- use#LAA Mycologia, 102(6), 2010, pp. 1398–1416. DOI: 10.3852/10-046 # 2010 by The Mycological Society of America, Lawrence, KS 66044-8897 Phylogeny of Cyttaria inferred from nuclear and mitochondrial sequence and morphological data Kristin R. Peterson1 sort into clades according to their associations with Donald H. Pfister subgenera Lophozonia and Nothofagus. Department of Organismic and Evolutionary Biology, Key words: Encoelioideae, Leotiomycetes, Notho- Harvard University, 22 Divinity Avenue, Cambridge, fagus, southern hemisphere Massachusetts 02138 INTRODUCTION Abstract: Cyttaria species (Leotiomycetes, Cyttar- Species belonging to Cyttaria (Leotiomycetes, Cyttar- iales) are obligate, biotrophic associates of Nothofagus iales) have interested evolutionary biologists since (Hamamelididae, Nothofagaceae), the southern Darwin (1839), who collected on his Beagle voyage beech. As such Cyttaria species are restricted to the their spherical, honeycombed fruit bodies in south- southern hemisphere, inhabiting southern South ern South America (FIG. -
M U S H R O O
M U S Jack O’lantern H 7311 Highway 100 R Nashville, TN 37221 615-862-8555 [email protected] www.wpnc.nashville.gov O List compiled by Deb Beazley, 1986,1993,2003,2006,2009, 2018 Photographs by Deb Beazley O M Green Spored Lepiota S Of Warner Parks Common Split Gill MUSHROOMS OF THE WARNER PARKS 200) Arched Earthstar Geastrum fornicatum 201) Rounded Earthstar Geastrum saccatum ** Remember: The Park is a delicate natural area. All plants, animals, and fungi are strictly protected. Collecting of anything is prohibited. Stalked Puffballs: Order Tulostomatales 202) Buried-stalk Puffball Tulostoma simulans Kingdom: Fungus Phylum: Ascomycota - Spores formed inside sac-like cells called asci; (also contains yeasts, False Truffles: Order Hymenogastrales bread molds, and powdery mildews) 203) Yellow Blob False Truffle Alpova luteus (trappei) Class: Discomycetes - Asci line the exposed surface of the fruiting body Bird’s Nest Fungi: Order Nidulariales Cup Fungi: Order Pizizales 204) White-egg Bird’s Nest Crucibulum laeve 1) Scarlet Cup Sarcoscypha coccinea 205) Splash Cups Cyathus stercoreus 2) Stalked Scarlet Cup Sarcoscypa occidentalis 206) Striated Splash Cups Cyathus striatus 3) Burn Site Shield Cup Ascoblus carbonazius Rounded Earthstar 4) Crustlike Cup Rhizina undalata Stinkhorns: Order Phallales 5) Devil’s Urn Urnula craterium 207) Pitted White Stinkhorn Phallus impudicus 6) Eyelash Cup Scutellinia scutellata 208) Elegant Stinkhorn Mutinus elegans 7) Ribbed-stalked Cup Helvella acetabulum 209) Lantern Stinkhorn Lysurus mokusin 8) Yellow Morel Morchella esculenta 9) Hairy Rubber Cup Bulgaria rufa Smuts, Rusts, Blights, and Wilts 210) Cedar Apple Rust Gymnosporangium juniperi-virginianae Earth Tongues: Order Helotiales 211) Corn Smut Ustilago maydis 10) Velvety Earth Tongue Trichoglossum hirsutum 11) Purple Jelly Drops Ascocoryne sarcoides Class: Myxomycetes 12) Yellow Fairy Cups Bisporella citrina Yellow Morel 13) Fairy Fan Spathularia sp. -
A Multigene Phylogeny Toward a New Phylogenetic Classification of Leotiomycetes Peter R
Johnston et al. IMA Fungus (2019) 10:1 https://doi.org/10.1186/s43008-019-0002-x IMA Fungus RESEARCH Open Access A multigene phylogeny toward a new phylogenetic classification of Leotiomycetes Peter R. Johnston1* , Luis Quijada2, Christopher A. Smith1, Hans-Otto Baral3, Tsuyoshi Hosoya4, Christiane Baschien5, Kadri Pärtel6, Wen-Ying Zhuang7, Danny Haelewaters2,8, Duckchul Park1, Steffen Carl5, Francesc López-Giráldez9, Zheng Wang10 and Jeffrey P. Townsend10 Abstract Fungi in the class Leotiomycetes are ecologically diverse, including mycorrhizas, endophytes of roots and leaves, plant pathogens, aquatic and aero-aquatic hyphomycetes, mammalian pathogens, and saprobes. These fungi are commonly detected in cultures from diseased tissue and from environmental DNA extracts. The identification of specimens from such character-poor samples increasingly relies on DNA sequencing. However, the current classification of Leotiomycetes is still largely based on morphologically defined taxa, especially at higher taxonomic levels. Consequently, the formal Leotiomycetes classification is frequently poorly congruent with the relationships suggested by DNA sequencing studies. Previous class-wide phylogenies of Leotiomycetes have been based on ribosomal DNA markers, with most of the published multi-gene studies being focussed on particular genera or families. In this paper we collate data available from specimens representing both sexual and asexual morphs from across the genetic breadth of the class, with a focus on generic type species, to present a phylogeny based on up to 15 concatenated genes across 279 specimens. Included in the dataset are genes that were extracted from 72 of the genomes available for the class, including 10 new genomes released with this study. To test the statistical support for the deepest branches in the phylogeny, an additional phylogeny based on 3156 genes from 51 selected genomes is also presented. -
Complete References List
Aanen, D. K. & T. W. Kuyper (1999). Intercompatibility tests in the Hebeloma crustuliniforme complex in northwestern Europe. Mycologia 91: 783-795. Aanen, D. K., T. W. Kuyper, T. Boekhout & R. F. Hoekstra (2000). Phylogenetic relationships in the genus Hebeloma based on ITS1 and 2 sequences, with special emphasis on the Hebeloma crustuliniforme complex. Mycologia 92: 269-281. Aanen, D. K. & T. W. Kuyper (2004). A comparison of the application of a biological and phenetic species concept in the Hebeloma crustuliniforme complex within a phylogenetic framework. Persoonia 18: 285-316. Abbott, S. O. & Currah, R. S. (1997). The Helvellaceae: Systematic revision and occurrence in northern and northwestern North America. Mycotaxon 62: 1-125. Abesha, E., G. Caetano-Anollés & K. Høiland (2003). Population genetics and spatial structure of the fairy ring fungus Marasmius oreades in a Norwegian sand dune ecosystem. Mycologia 95: 1021-1031. Abraham, S. P. & A. R. Loeblich III (1995). Gymnopilus palmicola a lignicolous Basidiomycete, growing on the adventitious roots of the palm sabal palmetto in Texas. Principes 39: 84-88. Abrar, S., S. Swapna & M. Krishnappa (2012). Development and morphology of Lysurus cruciatus--an addition to the Indian mycobiota. Mycotaxon 122: 217-282. Accioly, T., R. H. S. F. Cruz, N. M. Assis, N. K. Ishikawa, K. Hosaka, M. P. Martín & I. G. Baseia (2018). Amazonian bird's nest fungi (Basidiomycota): Current knowledge and novelties on Cyathus species. Mycoscience 59: 331-342. Acharya, K., P. Pradhan, N. Chakraborty, A. K. Dutta, S. Saha, S. Sarkar & S. Giri (2010). Two species of Lysurus Fr.: addition to the macrofungi of West Bengal. -
AGARICA Mykologisk Tidsskrift Utgitt Av Norges Sopp- Og Nyttevekstforbund / a Mycological Journal Published by Agariplantus Norvegicus
AGARICA Mykologisk tidsskrift utgitt av Norges sopp- og nyttevekstforbund / A mycological journal published by Agariplantus norvegicus. Tidsskriftet AGARICA publiserer originalartikler med hovedfokus på mykofloristikk og taksonomi og tar dessuten sikte på å formidle god populærviten skap. Ulike typer manuskript mottas, herunder regu lære artikler , mindre kommentarer (notes), over siktsartikler (reviews) eller populariserte utgaver av mer omfattende forskningsartikler. AGARICA pub liserer norsk-, svensk-, dansk, og engelskspråklige bidrag. Tidsskriftet har fagfellevurdering og artik lenes endelige utforming gjøres i samarbeid mellom forfatter og redaksjonen. I utgangspunktet utkommer et årlig nummer av AGARICA (men ved større tilstrømming av artikler utkommer to). Redaksjonskomiteen består av: Anders K. Wollan, (redaktør) [email protected] Gro Gulden, [email protected] Klaus Høiland, [email protected] Even W. Hansen, [email protected] Gry Alfredsen, [email protected] Håvard Kauserud, [email protected] Jon-Otto Aarnæs, (redaksjonssekretær) [email protected] Ønsker du å abonnere på AGARICA gå til hjem mesiden til Norges sopp- og nyttevekstforbund eller direkte til http//www.Agarica.no. Norges sopp- og nyttvekstforbund Fredrik A. Dahls vei 20, 1432 Ås www.soppognyttevekster.no E-post: [email protected] Forsidebilde: Bjerkandera fumosa. Foto: Tom Hellik Hofton. I venstre kollone denne siden fra toppen: Trolljordtunge (Geoglossum simile). Foto: Per Fadnes. Junghuhnia collabens. Foto: Tom H. Hofton.. Lilla jordbærslørsopp Cortinarius suaveolens. Foto: K.H. Brandrud. Galerina carbonicola. Foto: Gro Gulden AGARICA 2011 vol 30 Kjære leser! Dear Reader! Tilfanget av bidrag til Agarica har økt markert. Agarica has experienced a marked increase Tilfeldig? Neppe; Agarica har kommet inn i in submitted articles. -
The Genera Phillipsia, Chlorociboria and Cookeina (Ascomycota) in Brazil and Keys to the Known Species
Brazilian Journal of Development 1790 ISSN: 2525-8761 The genera Phillipsia, Chlorociboria and Cookeina (Ascomycota) in Brazil and keys to the known species Os gêneros Phillipsia, Chlorociboria e Cookeina (Ascomycota) no Brasil e chave para identificação das espécies conhecidas DOI:10.34117/bjdv7n1-123 Recebimento dos originais: 08/12/2020 Aceitação para publicação: 08/01/2021 Lilian Pedroso Maggio PhD student, PPG Ciências Biológicas, Universidade Federal do Pampa - UNIPAMPA Campus São Gabriel, Brazil Av. Antonio Trilha, 1847 - Centro, São Gabriel - RS, CEP: 97300-162 E-mail: [email protected] Fernando Augusto Bertazzo da Silva PhD student, PPG Ciências Biológicas, Universidade Federal do Pampa - UNIPAMPA Campus São Gabriel, Brazil Av. Antonio Trilha, 1847 - Centro, São Gabriel - RS, CEP: 97300-162 E-mail: [email protected] Marines de Avila Heberle PhD student, PPG Ciências Biológicas, Universidade Federal do Pampa - UNIPAMPA Campus São Gabriel, Brazil Av. Antonio Trilha, 1847 - Centro, São Gabriel - RS, CEP: 97300-162 E-mail: [email protected] Ana Luiza Klotz PhD student, PPG Ciências Biológicas, Universidade Federal do Pampa – UNIPAMPA - Campus São Gabriel, Brazil Av. Antonio Trilha, 1847 - Centro, São Gabriel - RS, CEP: 97300-162 E-mail: [email protected] Marisa Terezinha Lopes Putzke Professor, Universidade de Santa Cruz do Sul – UNISC Av. Independência, 2293, CP 188, Santa Cruz do Sul, RS CEP: 96815-900 E-mail: [email protected] Jair Putzke Professor Titular, Universidade Federal do Pampa – UNIPAMPA. Av. Antonio Trilha, 1847 - Centro, São Gabriel - RS, CEP: 97300-162 E-mail: [email protected] ABSTRACT Ascomycota represent the largest and most diverse group of fungi in the world and can be found in many different habitats. -
An Inventory of Fungal Diversity in Ohio Research Thesis Presented In
An Inventory of Fungal Diversity in Ohio Research Thesis Presented in partial fulfillment of the requirements for graduation with research distinction in the undergraduate colleges of The Ohio State University by Django Grootmyers The Ohio State University April 2021 1 ABSTRACT Fungi are a large and diverse group of eukaryotic organisms that play important roles in nutrient cycling in ecosystems worldwide. Fungi are poorly documented compared to plants in Ohio despite 197 years of collecting activity, and an attempt to compile all the species of fungi known from Ohio has not been completed since 1894. This paper compiles the species of fungi currently known from Ohio based on vouchered fungal collections available in digitized form at the Mycology Collections Portal (MyCoPortal) and other online collections databases and new collections by the author. All groups of fungi are treated, including lichens and microfungi. 69,795 total records of Ohio fungi were processed, resulting in a list of 4,865 total species-level taxa. 250 of these taxa are newly reported from Ohio in this work. 229 of the taxa known from Ohio are species that were originally described from Ohio. A number of potentially novel fungal species were discovered over the course of this study and will be described in future publications. The insights gained from this work will be useful in facilitating future research on Ohio fungi, developing more comprehensive and modern guides to Ohio fungi, and beginning to investigate the possibility of fungal conservation in Ohio. INTRODUCTION Fungi are a large and very diverse group of organisms that play a variety of vital roles in natural and agricultural ecosystems: as decomposers (Lindahl, Taylor and Finlay 2002), mycorrhizal partners of plant species (Van Der Heijden et al. -
Pioneering a Fungal Inventory at Cusuco National Park, Honduras
Journal of Mesoamerican Biology Special Issue: Biodiversity of the Cordillera del Merendón Volume 1 (1), June, 2021 Pioneering a fungal inventory at Cusuco National Park, Honduras DANNY HAELEWATERS1,2,3,*, NATHAN SCHOUttETEN3, PAMELA MEDINA-VAN BERKUM1,4, THOMAS E. MARTIN1, ANNEMIEKE VERBEKEN3 AND M. CATHERINE AIME2 1 Operation Wallacea Ltd, Wallace House, Old Boling- broke, Lincolnshire, PE23 4EX, UK. Abstract 2 Department of Botany and Plant Pathology, Purdue University, 915 W. State Street, West Lafayette, Indi- Neotropical cloud forests are biologically and eco- ana 47907, USA. logically unique and represent a largely untapped 3 Research Group Mycology, Department of Biolo- reservoir of species new to science, particularly for gy, Ghent University, 35 K.L. Ledeganckstraat, 9000 understudied groups like those within the King- Ghent, Belgium. dom Fungi. We conducted a three-week fungal 4 Max Planck Institute for Chemical Ecology, Hans- survey within Cusuco National Park, Honduras Knöll-Straße 8, 07745 Jena, Germany. and made 116 collections of fungi in forest habi- tats at 1287–2050 m a.s.l. Undescribed species are *Corresponding author. Email: likely to be present in those collections, includ- [email protected] ing members of the genera Calostoma (Boletales), Chlorociboria, Chlorosplenium, Ionomidotis (Hel- otiales), Amparoina, Cyathus, Gymnopus, Pterula (Agaricales), Lactifluus (Russulales), Mycocitrus (Hypocreales), Trechispora (Trechisporales), and Article info Xylaria (Xylariales). In this paper, we discuss the contributions and impacts of mycological surveys Keywords: in the Neotropics and propose the establishment of Central America, Cloud Forest, Fungal Diversity, a long-term mycological inventory at Cusuco Na- Honduras, Tropical Fungi tional Park—the first of its kind in northern Central America.