Three New Species of Dicephalospora from China As Revealed by Morphological and Molecular Evidences
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Development and Evaluation of Rrna Targeted in Situ Probes and Phylogenetic Relationships of Freshwater Fungi
Development and evaluation of rRNA targeted in situ probes and phylogenetic relationships of freshwater fungi vorgelegt von Diplom-Biologin Christiane Baschien aus Berlin Von der Fakultät III - Prozesswissenschaften der Technischen Universität Berlin zur Erlangung des akademischen Grades Doktorin der Naturwissenschaften - Dr. rer. nat. - genehmigte Dissertation Promotionsausschuss: Vorsitzender: Prof. Dr. sc. techn. Lutz-Günter Fleischer Berichter: Prof. Dr. rer. nat. Ulrich Szewzyk Berichter: Prof. Dr. rer. nat. Felix Bärlocher Berichter: Dr. habil. Werner Manz Tag der wissenschaftlichen Aussprache: 19.05.2003 Berlin 2003 D83 Table of contents INTRODUCTION ..................................................................................................................................... 1 MATERIAL AND METHODS .................................................................................................................. 8 1. Used organisms ............................................................................................................................. 8 2. Media, culture conditions, maintenance of cultures and harvest procedure.................................. 9 2.1. Culture media........................................................................................................................... 9 2.2. Culture conditions .................................................................................................................. 10 2.3. Maintenance of cultures.........................................................................................................10 -
Psychrophilic Fungi from the World's Roof
Persoonia 34, 2015: 100–112 www.ingentaconnect.com/content/nhn/pimj RESEARCH ARTICLE http://dx.doi.org/10.3767/003158515X685878 Psychrophilic fungi from the world’s roof M. Wang1,2, X. Jiang3, W. Wu3, Y. Hao1, Y. Su1, L. Cai1, M. Xiang1, X. Liu1 Key words Abstract During a survey of cold-adapted fungi in alpine glaciers on the Qinghai-Tibet Plateau, 1 428 fungal isolates were obtained of which 150 species were preliminary identified. Phoma sclerotioides and Pseudogymnoascus pan- glaciers norum were the most dominant species. Psychrotolerant species in Helotiales (Leotiomycetes, Ascomycota) were Phoma sclerotioides studied in more detail as they represented the most commonly encountered group during this investigation. Two Pseudogymnoascus pannorum phylogenetic trees were constructed based on the partial large subunit nrDNA (LSU) to infer the taxonomic place- Psychrophila ments of these strains. Our strains nested in two well-supported major clades, which represented Tetracladium and psychrotolerant a previously unknown lineage. The unknown lineage is distant to any other currently known genera in Helotiales. Tetracladium Psychrophila gen. nov. was therefore established to accommodate these strains which are characterised by globose or subglobose conidia formed from phialides on short or reduced conidiophores. Our analysis also showed that an LSU-based phylogeny is insufficient in differentiating strains at species level. Additional analyses using combined sequences of ITS+TEF1+TUB regions were employed to further investigate the phylogenetic relationships of these strains. Together with the recognisable morphological distinctions, six new species (i.e. P. antarctica, P. lutea, P. oli- vacea, T. ellipsoideum, T. globosum and T. psychrophilum) were described. Our preliminary investigation indicates a high diversity of cold-adapted species in nature, and many of them may represent unknown species. -
The Phylogenetic Relationships of Torrendiella and Hymenotorrendiella Gen
Phytotaxa 177 (1): 001–025 ISSN 1179-3155 (print edition) www.mapress.com/phytotaxa/ PHYTOTAXA Copyright © 2014 Magnolia Press Article ISSN 1179-3163 (online edition) http://dx.doi.org/10.11646/phytotaxa.177.1.1 The phylogenetic relationships of Torrendiella and Hymenotorrendiella gen. nov. within the Leotiomycetes PETER R. JOHNSTON1, DUCKCHUL PARK1, HANS-OTTO BARAL2, RICARDO GALÁN3, GONZALO PLATAS4 & RAÚL TENA5 1Landcare Research, Private Bag 92170, Auckland, New Zealand. 2Blaihofstraße 42, D-72074 Tübingen, Germany. 3Dpto. de Ciencias de la Vida, Facultad de Biología, Universidad de Alcalá, P.O.B. 20, 28805 Alcalá de Henares, Madrid, Spain. 4Fundación MEDINA, Microbiología, Parque Tecnológico de Ciencias de la Salud, 18016 Armilla, Granada, Spain. 5C/– Arreñales del Portillo B, 21, 1º D, 44003, Teruel, Spain. Corresponding author: [email protected] Abstract Morphological and phylogenetic data are used to revise the genus Torrendiella. The type species, described from Europe, is retained within the Rutstroemiaceae. However, Torrendiella species reported from Australasia, southern South America and China were found to be phylogenetically distinct and have been recombined in the newly proposed genus Hymenotorrendiel- la. The Hymenotorrendiella species are distinguished morphologically from Rutstroemia in having a Hymenoscyphus-type rather than Sclerotinia-type ascus apex. Zoellneria, linked taxonomically to Torrendiella in the past, is genetically distinct and a synonym of Chaetomella. Keywords: ascus apex, phylogeny, taxonomy, Hymenoscyphus, Rutstroemiaceae, Sclerotiniaceae, Zoellneria, Chaetomella Introduction Torrendiella was described by Boudier and Torrend (1911), based on T. ciliata Boudier in Boudier and Torrend (1911: 133), a species reported from leaves, and more rarely twigs, of Rubus, Quercus and Laurus from Spain, Portugal and the United Kingdom (Graddon 1979; Spooner 1987; Galán et al. -
How Many Fungi Make Sclerotia?
fungal ecology xxx (2014) 1e10 available at www.sciencedirect.com ScienceDirect journal homepage: www.elsevier.com/locate/funeco Short Communication How many fungi make sclerotia? Matthew E. SMITHa,*, Terry W. HENKELb, Jeffrey A. ROLLINSa aUniversity of Florida, Department of Plant Pathology, Gainesville, FL 32611-0680, USA bHumboldt State University of Florida, Department of Biological Sciences, Arcata, CA 95521, USA article info abstract Article history: Most fungi produce some type of durable microscopic structure such as a spore that is Received 25 April 2014 important for dispersal and/or survival under adverse conditions, but many species also Revision received 23 July 2014 produce dense aggregations of tissue called sclerotia. These structures help fungi to survive Accepted 28 July 2014 challenging conditions such as freezing, desiccation, microbial attack, or the absence of a Available online - host. During studies of hypogeous fungi we encountered morphologically distinct sclerotia Corresponding editor: in nature that were not linked with a known fungus. These observations suggested that Dr. Jean Lodge many unrelated fungi with diverse trophic modes may form sclerotia, but that these structures have been overlooked. To identify the phylogenetic affiliations and trophic Keywords: modes of sclerotium-forming fungi, we conducted a literature review and sequenced DNA Chemical defense from fresh sclerotium collections. We found that sclerotium-forming fungi are ecologically Ectomycorrhizal diverse and phylogenetically dispersed among 85 genera in 20 orders of Dikarya, suggesting Plant pathogens that the ability to form sclerotia probably evolved 14 different times in fungi. Saprotrophic ª 2014 Elsevier Ltd and The British Mycological Society. All rights reserved. Sclerotium Fungi are among the most diverse lineages of eukaryotes with features such as a hyphal thallus, non-flagellated cells, and an estimated 5.1 million species (Blackwell, 2011). -
First Records of Two Ascomycete Fungi (Ascomycota) for Slovenia
NATURA SLOVENIAE 21(2): 5-11 Prejeto / Received: 5. 6. 2019 SHORT COMMUNICATION Sprejeto / Accepted: 30. 12. 2019 First records of two ascomycete fungi (Ascomycota) for Slovenia Luka ŠPARL1, Eva ZUPAN2 1Služba Krajinski park Tivoli, Rožnik in Šišenski hrib, Javno podjetje VOKA Snaga d. o. o., Vodovodna cesta 90, SI-1001 Ljubljana; E-mail: [email protected] 2Eva ZUPAN, Vrhovci c XII/24a, SI-1000 Ljubljana; E-mail: [email protected] Abstract. In April and May 2019, two ascomycetous species – Vibrissea filisporia (Bonord.) Korf & A. Sánchez 1967 and Cudoniella tenuispora (Cooke & Massee) Dennis 1974 were observed in Tivoli, Rožnik and Šiška hill Landscape Park in central Slovenia. This is the first evidence of their presence in the country. Despite specific growth condition requirements, there is a reasonable probability that these two species grow also elsewhere in Slovenia, but have simply been overlooked. We recommend further studies of suitable habitats for the species, to complete the knowledge on their distribution within the country. Key words: fungi, Ascomycota, first records, Vibrissea filisporia, Cudoniella tenuispora, Mali Rožnik, Ljubljana, Slovenia Izvleček. Prvi podatki o dveh vrstah gliv zaprtotrosnic (Ascomycota) za Slovenijo – V aprilu in maju 2019 sta bili na območju zavarovanega območja Krajinskega parka Tivoli, Rožnik in Šišenski hrib v osrednji Sloveniji najdeni dve glivi zaprtotrosnici, Vibrissea filisporia (Bonord.) Korf & A. Sánchez 1967 in Cudoniella tenuispora (Cooke & Massee) Dennis 1974. Kljub specifičnim rastiščnim zahtevam je zelo verjetno, da ti dve vrsti uspevata tudi drugod po državi, a sta bili spregledani. Prihodnje študije primernih habitatov bodo lahko dopolnile poznavanje razširjenosti teh vrst v državi. -
The Ascomycota
Papers and Proceedings of the Royal Society of Tasmania, Volume 139, 2005 49 A PRELIMINARY CENSUS OF THE MACROFUNGI OF MT WELLINGTON, TASMANIA – THE ASCOMYCOTA by Genevieve M. Gates and David A. Ratkowsky (with one appendix) Gates, G. M. & Ratkowsky, D. A. 2005 (16:xii): A preliminary census of the macrofungi of Mt Wellington, Tasmania – the Ascomycota. Papers and Proceedings of the Royal Society of Tasmania 139: 49–52. ISSN 0080-4703. School of Plant Science, University of Tasmania, Private Bag 55, Hobart, Tasmania 7001, Australia (GMG*); School of Agricultural Science, University of Tasmania, Private Bag 54, Hobart, Tasmania 7001, Australia (DAR). *Author for correspondence. This work continues the process of documenting the macrofungi of Mt Wellington. Two earlier publications were concerned with the gilled and non-gilled Basidiomycota, respectively, excluding the sequestrate species. The present work deals with the non-sequestrate Ascomycota, of which 42 species were found on Mt Wellington. Key Words: Macrofungi, Mt Wellington (Tasmania), Ascomycota, cup fungi, disc fungi. INTRODUCTION For the purposes of this survey, all Ascomycota having a conspicuous fruiting body were considered, excluding Two earlier papers in the preliminary documentation of the endophytes. Material collected during forays was described macrofungi of Mt Wellington, Tasmania, were confined macroscopically shortly after collection, and examined to the ‘agarics’ (gilled fungi) and the non-gilled species, microscopically to obtain details such as the size of the -
Preliminary Classification of Leotiomycetes
Mycosphere 10(1): 310–489 (2019) www.mycosphere.org ISSN 2077 7019 Article Doi 10.5943/mycosphere/10/1/7 Preliminary classification of Leotiomycetes Ekanayaka AH1,2, Hyde KD1,2, Gentekaki E2,3, McKenzie EHC4, Zhao Q1,*, Bulgakov TS5, Camporesi E6,7 1Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming 650201, Yunnan, China 2Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100, Thailand 3School of Science, Mae Fah Luang University, Chiang Rai, 57100, Thailand 4Landcare Research Manaaki Whenua, Private Bag 92170, Auckland, New Zealand 5Russian Research Institute of Floriculture and Subtropical Crops, 2/28 Yana Fabritsiusa Street, Sochi 354002, Krasnodar region, Russia 6A.M.B. Gruppo Micologico Forlivese “Antonio Cicognani”, Via Roma 18, Forlì, Italy. 7A.M.B. Circolo Micologico “Giovanni Carini”, C.P. 314 Brescia, Italy. Ekanayaka AH, Hyde KD, Gentekaki E, McKenzie EHC, Zhao Q, Bulgakov TS, Camporesi E 2019 – Preliminary classification of Leotiomycetes. Mycosphere 10(1), 310–489, Doi 10.5943/mycosphere/10/1/7 Abstract Leotiomycetes is regarded as the inoperculate class of discomycetes within the phylum Ascomycota. Taxa are mainly characterized by asci with a simple pore blueing in Melzer’s reagent, although some taxa have lost this character. The monophyly of this class has been verified in several recent molecular studies. However, circumscription of the orders, families and generic level delimitation are still unsettled. This paper provides a modified backbone tree for the class Leotiomycetes based on phylogenetic analysis of combined ITS, LSU, SSU, TEF, and RPB2 loci. In the phylogenetic analysis, Leotiomycetes separates into 19 clades, which can be recognized as orders and order-level clades. -
Characterization of Incompatible and Compatible Camellia-Ciborinia Camelliae Plant-Pathogen Interactions
Copyright is owned by the Author of the thesis. Permission is given for a copy to be downloaded by an individual for the purpose of research and private study only. The thesis may not be reproduced elsewhere without the permission of the Author. Characterization of incompatible and compatible Camellia-Ciborinia camelliae plant-pathogen interactions A thesis presented in partial fulfilment of the requirements for the degree of Doctor of Philosophy in Plant Biology at Massey University, Palmerston North, New Zealand Matthew Denton-Giles 2014 Abstract Many Camellia species and cultivars are susceptible to infection by the host-specific fungal phytopathogen Ciborinia camelliae L. M. Kohn (Sclerotiniaceae). This necrotrophic pathogen specifically infects floral tissue resulting in rapid development of host-cell death and premature flower fall. C. camelliae is considered to be the causal agent of ‘Camellia flower blight’ and is an economically significant pest of both the Camellia floriculture and Camellia oil seed industries. This study sought to identify molecular components that contribute to incompatible and compatible interactions between C. camelliae and Camellia petal tissue. Microscopic analyses of incompatible C. camelliae-Camellia lutchuensis interactions revealed several hallmarks of induced plant resistance, including papillae formation, H2O2 accumulation, and localized cell death. Extension of resistance analyses to an additional 39 Camellia spp. identified variable levels of resistance within the Camellia genus, with Camellia lutchuensis, Camellia transnokoensis and Camellia yuhsienensis exhibiting the strongest resistance phenotypes. Collectively, Camellia species of section Theopsis showed the highest levels of incompatibility. Based on this observation, a total of 18 Camellia interspecific hybrids with section Theopsis species in their parentage were tested for resistance to C. -
Vol. I October-December 1974 No. 2 Chzorosplenium and Its Segregates
AN INTERNATIONAL JOURNAL DESIGNED TO EXPEDITE PUBLICATION OF RESEARCH ON TAXONOMY & NOMENCLATURE OF FUNGI & LICHENS Vol. I October-December 1974 No. 2 ChZorosplenium and its segregates. I. lntroduction and the genus Chlo~osplenium •. ..... JOHN R. DIXON 65 Notes on species of Pa:rmotl'ema (Lichencs: Parmeli- aceae) containing yellow pigments. ~1r\SO~ B. HALE, JR. 105 New Hyphomycetes from Guadeloupe, F.W.T. A 'l.boaym:ama fi Zico Za~ T3tl'acl'ium musicoZa, and Tho~eteZZopsis caLicioides . ...... MARTHA SHERKOOD 117 Capnobot:rys dingZeyae n.sp .. ......... S. J. HUGHES 121 J\ new Phane1•ocizaete with a Chl'ysospo1•ium imperfect state.. ...... H. H. BURDSALL, JR. AND W. E. ESLYN 123 Pezi;:a fLaV01Jirens, an older name for Vib1•issea pe=iaoides . ................ ..... RICHARD P. KORF 134 PoZyporuc squamoaus in Utah. \\'ILLIMt R. BURK AND RICHARD E. REX 135 Some comments on PuLchromyces :im'coZa from the Americas as noted by ~- H. Weston. DONALD H. PFISTER, GLENDA J. WINN AND GENNARO J. CACAVIO 137 ! . M.A . Nomenclature Notice. ....... ..... ......... 142 New records and distributions for several lichens in the southeastern United States ... JONATHAN P. DEY 143 On the typification of ScZerotir.ia. RICHARD P. KORF 146 [NYCOTAXON for July-September 1974 (l: l-64) was issued September 16, 1974] ISSN 0093-4666 HYXNAE 1(2) 65-148 (1974) Published quarterly by MYCOTAXON, P.O. Box 264, Ithaca, NY 14850 Subscription pr~ces per volume: $15 us & Canada, $16 other foreign; re duced rate for individuals only, $6 US & Canada, $7 other foreign Application to mail at second class postage rates pending at Ithaca, NY MYCOTAXON Vol. -
9B Taxonomy to Genus
Fungus and Lichen Genera in the NEMF Database Taxonomic hierarchy: phyllum > class (-etes) > order (-ales) > family (-ceae) > genus. Total number of genera in the database: 526 Anamorphic fungi (see p. 4), which are disseminated by propagules not formed from cells where meiosis has occurred, are presently not grouped by class, order, etc. Most propagules can be referred to as "conidia," but some are derived from unspecialized vegetative mycelium. A significant number are correlated with fungal states that produce spores derived from cells where meiosis has, or is assumed to have, occurred. These are, where known, members of the ascomycetes or basidiomycetes. However, in many cases, they are still undescribed, unrecognized or poorly known. (Explanation paraphrased from "Dictionary of the Fungi, 9th Edition.") Principal authority for this taxonomy is the Dictionary of the Fungi and its online database, www.indexfungorum.org. For lichens, see Lecanoromycetes on p. 3. Basidiomycota Aegerita Poria Macrolepiota Grandinia Poronidulus Melanophyllum Agaricomycetes Hyphoderma Postia Amanitaceae Cantharellales Meripilaceae Pycnoporellus Amanita Cantharellaceae Abortiporus Skeletocutis Bolbitiaceae Cantharellus Antrodia Trichaptum Agrocybe Craterellus Grifola Tyromyces Bolbitius Clavulinaceae Meripilus Sistotremataceae Conocybe Clavulina Physisporinus Trechispora Hebeloma Hydnaceae Meruliaceae Sparassidaceae Panaeolina Hydnum Climacodon Sparassis Clavariaceae Polyporales Gloeoporus Steccherinaceae Clavaria Albatrellaceae Hyphodermopsis Antrodiella -
Taxonomic Study of Lambertella (Rutstroemiaceae, Helotiales) and Allied Substratal Stroma Forming Fungi from Japan
Taxonomic Study of Lambertella (Rutstroemiaceae, Helotiales) and Allied Substratal Stroma Forming Fungi from Japan A Dissertation Submitted to the Graduate School of Life and Environmental Sciences, the University of Tsukuba in Partial Fulfillment of the Requirements for the Degree of Doctor of Philosophy in Agricultural Science (Doctoral Program in Biosphere Resource Science and Technology) Yan-Jie ZHAO Contents Chapter 1 Introduction ............................................................................................................... 1 1–1 The genus Lambertella in Rutstroemiaceae .................................................................... 1 1–2 Taxonomic problems of Lambertella .............................................................................. 5 1–3 Allied genera of Lambertella ........................................................................................... 7 1–4 Objectives of the present research ................................................................................. 12 Chapter 2 Materials and Methods ............................................................................................ 17 2–1 Collection and isolation ................................................................................................. 17 2–2 Morphological examination .......................................................................................... 17 2–3 Observation of cultural characteristics .......................................................................... 18 2–4 DNA extraction -
MMA MASTERLIST - Sorted by Taxonomy
MMA MASTERLIST - Sorted by Taxonomy Sunday, December 10, 2017 Page 1 of 86 Amoebozoa Mycetomycota Protosteliomycetes Protosteliales Ceratiomyxaceae Ceratiomyxa fruticulosa Ceratiomyxa fruticulosa var. fruticulosa Ceratiomyxa fruticulosa var. poroides Ceratiomyxa sp. Mycetozoa Myxogastrea Incertae Sedis in Myxogastrea Liceaceae Licea minima Stemonitidaceae Brefeldia maxima Comatricha pulchella Comatricha sp. Comatricha typhoides Stemonitis axifera Stemonitis fusca Stemonitis sp. Stemonitis splendens Chromista Oomycota Incertae Sedis in Oomycota Peronosporales Peronosporaceae Plasmopara viticola Pythiaceae Pythium deBaryanum Oomycetes Saprolegniales Saprolegniaceae Saprolegnia sp. Peronosporea Albuginales Albuginaceae Albugo candida Fungus Ascomycota Ascomycetes Boliniales Boliniaceae Camarops petersii Capnodiales Capnodiaceae Scorias spongiosa Diaporthales Gnomoniaceae Cryptodiaporthe corni Sydowiellaceae Stegophora ulmea Valsaceae Cryphonectria parasitica Valsella nigroannulata Elaphomycetales Elaphomycetaceae Elaphomyces granulatus Elaphomyces sp. Erysiphales Erysiphaceae Erysiphe aggregata Erysiphe cichoracearum Erysiphe polygoni Microsphaera extensa Phyllactinia guttata Podosphaera clandestina Uncinula adunca Uncinula necator Hysteriales Hysteriaceae Glonium stellatum Leotiales Bulgariaceae Crinula caliciiformis Crinula sp. Mycocaliciales Mycocaliciaceae Phaeocalicium polyporaeum Peltigerales Collemataceae Leptogium cyanescens Lobariaceae Sticta fimbriata Nephromataceae Nephroma helveticum Peltigeraceae Peltigera evansiana Peltigera