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Supplementary Material for Nelson, P. R., B. Mccune & D. K. Swanson
Supplementary material for Nelson, P. R., B. McCune & D. K. Swanson. 2015. Lichen traits and species as indicators of vegetation and environment. The Bryologist 118(3): XX–XX. Supplementary Table S2. Trait matrix (alphabetical by species). “1” indicates a species possesses that trait. cladoniiform Filamentous Squamulose Cyano Erect Appressed 3D s branched Tripartite Fruticose Terricole Epiphyte Lignicole Saxicole p soredia lobules Foliose Simple foliose Green rawlin isida foliose Lichen Species Subspecies richly Only g Alectoria ochroleuca 1 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 0 Allantoparmelia almquistii 1 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 Allantoparmelia alpicola 1 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 Allocetraria madreporiformis 1 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 0 Anaptychia bryorum 1 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 0 0 Arctoparmelia centrifuga 1 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 Arctoparmelia incurva 1 0 0 1 0 0 0 1 0 0 0 0 1 0 0 1 0 0 Arctoparmelia separata 1 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 Arctoparmelia subcentrifuga 1 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 Asahinea chrysantha 1 0 0 1 0 0 0 1 0 0 0 0 0 0 1 0 0 0 Baeomyces carneus 1 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 0 Baeomyces placophyllus 1 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 0 Baeomyces rufus 1 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 0 Blennothallia crispa 0 1 0 0 1 0 0 1 0 0 0 0 0 0 1 0 1 0 Brodoa oroarctica 1 0 0 1 0 0 0 1 0 0 0 0 0 0 1 0 0 0 Bryocaulon divergens 1 0 0 0 1 0 0 0 1 0 0 0 0 1 0 0 0 0 Bryoria capillaris 1 0 0 0 0 1 0 0 1 0 0 0 0 1 0 0 0 0 Bryoria chalybeiformis 1 0 0 0 0 1 0 0 1 0 0 0 0 -
Pleopsidiumdiscurrens, Comb. Nova, Newly Discovered in Southern Tibet
Ann. Bot. Fennici 33: 231–236 ISSN 0003-3847 Helsinki 30 October 1996 © Finnish Zoological and Botanical Publishing Board 1996 Pleopsidium discurrens, comb. nova, newly discovered in southern Tibet (Lichenological results of the Sino-German Joint Expedition to southeastern and eastern Tibet 1994. II.) Walter Obermayer Obermayer, W., Institut für Botanik, Karl-Franzens-Universität Graz, Holteigasse 6, A-8010 Graz, Austria Reveived 30 April 1996, accepted 10 June 1996 Pleopsidium discurrens (Zahlbr.) Obermayer comb. nova, hitherto known only from the type and paratype localities in NW Yunnan and SW Sichuan, has been discovered in SE Tibet. Morphological characters which separate it from other taxa of Pleopsidium Koerber emend. Hafellner, TLC data and ecological notes are provided. A lectotype of Acarospora discurrens Zahlbr. is selected. Key words: Acarospora discurrens, flora of Tibet, lichenized Ascomycotina, Pleopsidium, taxonomy, TLC data INTRODUCTION the genus Acarospora A. Massal. has only cited the taxon in an enumeration of previously described In 1930, the famous Viennese lichenologist Alex- species (Magnusson 1933: 47) and in a key, treating ander Zahlbruckner published a thorough study of taxa described after 1929 (Magnusson 1956: 4). lichens collected mainly by Heinrich Handel-Maz- During a three month expedition to southeast- zetti during an expedition of the Akademie der Wissen- ern and eastern Tibet in the summer of 1994, the schaften in Wien to southwestern China (Zahlbruckner author had the opportunity to make a further collec- 1930). From 850 lichen specimens, Zahlbruckner tion of the mentioned species with its very conspicu- described 256 new taxa, including 219 species and ous growth form (see Figs. -
Untangling Quantitative Lichen Diversity in and Around Badrinath Holy Pilgrimage of Western Himalaya, India
Journal of Graphic Era University Vol. 6, Issue 1, 36-46, 2018 ISSN: 0975-1416 (Print), 2456-4281 (Online) Untangling Quantitative Lichen Diversity in and Around Badrinath Holy Pilgrimage of Western Himalaya, India Sugam Gupta1, Omesh Bajpai2*, Himanshu Rai3,4, Dalip Kumar Upreti3, Pradeep Kumar Sharma1, Rajan Kumar Gupta4 1Department of Environmental Science Graphic Era (Deemed to be University), Dehradun, India 2Division of Plant Sciences Plant and Environmental Research Institute (PERI), Kanpur, Uttar Pradesh, India 3Lichenology laboratory, Plant Diversity, Systematics and Herbarium Division, CSIR-National Botanical Research Institute, Lucknow, Uttar Pradesh, India 4Department of Botany Pt. Lalit Mohan, Government P.G. College, Rishikesh, Dehradun, India *Corresponding Author: [email protected] (Received August 16, 2017; Accepted, December 6, 2017) Abstract The present study was conducted in the Badrinath holy pilgrimage in Western Himalaya. Lichen collected from seven localities (Badrinath, enroute Bhimpul to Vasudhara, Mana, enroute Vasudhara to Mana, Bhimpul, Vasudhara Glacier and enroute Vasudhara to Bhagirathi Glacier). The highest overall IVI (6.64) was recorded for Rhizoplaca chrysoleuca. The maximum number of lichens have been documented in Badrinath locality (139 spp.) while minimum (6) in enroute Vasudhara to Bhagirathi Glacier. The Badrinath has also express maximum 71 site specific species, while the Vasudhara Glacier has only 2 species. The dominance has been computed maximum (0.17) for enroute Vasudhara to Bhagirathi Glacier while, minimum for the Badrinath (0.01). The lowest Simpson Index value (0.83) has been recorded in enroute Vasudhara to Bhagirathi Glacier while the highest (0.99) in Badrinath. The lowest value of Berger-Parker diversity index (0.03), as well as the highest values of Brillouin, Shannon, Menhinick, Margalef and Fisher alpha diversity indices (7.20, 4.78, 8.03, 24.2 and 100.6 respectively) from the Badrinath locality, designates it as a site of highest species diversity. -
Opuscula Philolichenum, 6: 1-XXXX
Opuscula Philolichenum, 15: 56-81. 2016. *pdf effectively published online 25July2016 via (http://sweetgum.nybg.org/philolichenum/) Lichens, lichenicolous fungi, and allied fungi of Pipestone National Monument, Minnesota, U.S.A., revisited M.K. ADVAITA, CALEB A. MORSE1,2 AND DOUGLAS LADD3 ABSTRACT. – A total of 154 lichens, four lichenicolous fungi, and one allied fungus were collected by the authors from 2004 to 2015 from Pipestone National Monument (PNM), in Pipestone County, on the Prairie Coteau of southwestern Minnesota. Twelve additional species collected by previous researchers, but not found by the authors, bring the total number of taxa known for PNM to 171. This represents a substantial increase over previous reports for PNM, likely due to increased intensity of field work, and also to the marked expansion of corticolous and anthropogenic substrates since the site was first surveyed in 1899. Reexamination of 116 vouchers deposited in MIN and the PNM herbarium led to the exclusion of 48 species previously reported from the site. Crustose lichens are the most common growth form, comprising 65% of the lichen diversity. Sioux Quartzite provided substrate for 43% of the lichen taxa collected. Saxicolous lichen communities were characterized by sampling four transects on cliff faces and low outcrops. An annotated checklist of the lichens of the site is provided, as well as a list of excluded taxa. We report 24 species (including 22 lichens and two lichenicolous fungi) new for Minnesota: Acarospora boulderensis, A. contigua, A. erythrophora, A. strigata, Agonimia opuntiella, Arthonia clemens, A. muscigena, Aspicilia americana, Bacidina delicata, Buellia tyrolensis, Caloplaca flavocitrina, C. lobulata, C. -
1307 Fungi Representing 1139 Infrageneric Taxa, 317 Genera and 66 Families ⇑ Jolanta Miadlikowska A, , Frank Kauff B,1, Filip Högnabba C, Jeffrey C
Molecular Phylogenetics and Evolution 79 (2014) 132–168 Contents lists available at ScienceDirect Molecular Phylogenetics and Evolution journal homepage: www.elsevier.com/locate/ympev A multigene phylogenetic synthesis for the class Lecanoromycetes (Ascomycota): 1307 fungi representing 1139 infrageneric taxa, 317 genera and 66 families ⇑ Jolanta Miadlikowska a, , Frank Kauff b,1, Filip Högnabba c, Jeffrey C. Oliver d,2, Katalin Molnár a,3, Emily Fraker a,4, Ester Gaya a,5, Josef Hafellner e, Valérie Hofstetter a,6, Cécile Gueidan a,7, Mónica A.G. Otálora a,8, Brendan Hodkinson a,9, Martin Kukwa f, Robert Lücking g, Curtis Björk h, Harrie J.M. Sipman i, Ana Rosa Burgaz j, Arne Thell k, Alfredo Passo l, Leena Myllys c, Trevor Goward h, Samantha Fernández-Brime m, Geir Hestmark n, James Lendemer o, H. Thorsten Lumbsch g, Michaela Schmull p, Conrad L. Schoch q, Emmanuël Sérusiaux r, David R. Maddison s, A. Elizabeth Arnold t, François Lutzoni a,10, Soili Stenroos c,10 a Department of Biology, Duke University, Durham, NC 27708-0338, USA b FB Biologie, Molecular Phylogenetics, 13/276, TU Kaiserslautern, Postfach 3049, 67653 Kaiserslautern, Germany c Botanical Museum, Finnish Museum of Natural History, FI-00014 University of Helsinki, Finland d Department of Ecology and Evolutionary Biology, Yale University, 358 ESC, 21 Sachem Street, New Haven, CT 06511, USA e Institut für Botanik, Karl-Franzens-Universität, Holteigasse 6, A-8010 Graz, Austria f Department of Plant Taxonomy and Nature Conservation, University of Gdan´sk, ul. Wita Stwosza 59, 80-308 Gdan´sk, Poland g Science and Education, The Field Museum, 1400 S. -
Lichen Functional Trait Variation Along an East-West Climatic Gradient in Oregon and Among Habitats in Katmai National Park, Alaska
AN ABSTRACT OF THE THESIS OF Kaleigh Spickerman for the degree of Master of Science in Botany and Plant Pathology presented on June 11, 2015 Title: Lichen Functional Trait Variation Along an East-West Climatic Gradient in Oregon and Among Habitats in Katmai National Park, Alaska Abstract approved: ______________________________________________________ Bruce McCune Functional traits of vascular plants have been an important component of ecological studies for a number of years; however, in more recent times vascular plant ecologists have begun to formalize a set of key traits and universal system of trait measurement. Many recent studies hypothesize global generality of trait patterns, which would allow for comparison among ecosystems and biomes and provide a foundation for general rules and theories, the so-called “Holy Grail” of ecology. However, the majority of these studies focus on functional trait patterns of vascular plants, with a minority examining the patterns of cryptograms such as lichens. Lichens are an important component of many ecosystems due to their contributions to biodiversity and their key ecosystem services, such as contributions to mineral and hydrological cycles and ecosystem food webs. Lichens are also of special interest because of their reliance on atmospheric deposition for nutrients and water, which makes them particularly sensitive to air pollution. Therefore, they are often used as bioindicators of air pollution, climate change, and general ecosystem health. This thesis examines the functional trait patterns of lichens in two contrasting regions with fundamentally different kinds of data. To better understand the patterns of lichen functional traits, we examined reproductive, morphological, and chemical trait variation along precipitation and temperature gradients in Oregon. -
Lichens of Alaska's South Coast
United States Department of Agriculture Lichens of Alaska’s South Coast Forest Service R10-RG-190 Alaska Region Reprint April 2014 WHAT IS A LICHEN? Lichens are specialized fungi that “farm” algae as a food source. Unlike molds, mildews, and mushrooms that parasitize or scavenge food from other organisms, the fungus of a lichen cultivates tiny algae and / or blue-green bacteria (called cyanobacteria) within the fabric of interwoven fungal threads that form the body of the lichen (or thallus). The algae and cyanobacteria produce food for themselves and for the fungus by converting carbon dioxide and water into sugars using the sun’s energy (photosynthesis). Thus, a lichen is a combination of two or sometimes three organisms living together. Perhaps the most important contribution of the fungus is to provide a protective habitat for the algae or cyanobacteria. The green or blue-green photosynthetic layer is often visible between two white fungal layers if a piece of lichen thallus is torn off. Most lichen-forming fungi cannot exist without the photosynthetic partner because they have become dependent on them for survival. But in all cases, a fungus looks quite different in the lichenized form compared to its free-living form. HOW DO LICHENS REPRODUCE? Lichens sexually reproduce with fruiting bodies of various shapes and colors that can often look like miniature mushrooms. These are called apothecia (Fig. 1) and contain spores that germinate and Figure 1. Apothecia, fruiting grow into the fungus. Each bodies fungus must find the right photosynthetic partner in order to become a lichen. Lichens reproduce asexually in several ways. -
Lichens and Associated Fungi from Glacier Bay National Park, Alaska
The Lichenologist (2020), 52,61–181 doi:10.1017/S0024282920000079 Standard Paper Lichens and associated fungi from Glacier Bay National Park, Alaska Toby Spribille1,2,3 , Alan M. Fryday4 , Sergio Pérez-Ortega5 , Måns Svensson6, Tor Tønsberg7, Stefan Ekman6 , Håkon Holien8,9, Philipp Resl10 , Kevin Schneider11, Edith Stabentheiner2, Holger Thüs12,13 , Jan Vondrák14,15 and Lewis Sharman16 1Department of Biological Sciences, CW405, University of Alberta, Edmonton, Alberta T6G 2R3, Canada; 2Department of Plant Sciences, Institute of Biology, University of Graz, NAWI Graz, Holteigasse 6, 8010 Graz, Austria; 3Division of Biological Sciences, University of Montana, 32 Campus Drive, Missoula, Montana 59812, USA; 4Herbarium, Department of Plant Biology, Michigan State University, East Lansing, Michigan 48824, USA; 5Real Jardín Botánico (CSIC), Departamento de Micología, Calle Claudio Moyano 1, E-28014 Madrid, Spain; 6Museum of Evolution, Uppsala University, Norbyvägen 16, SE-75236 Uppsala, Sweden; 7Department of Natural History, University Museum of Bergen Allégt. 41, P.O. Box 7800, N-5020 Bergen, Norway; 8Faculty of Bioscience and Aquaculture, Nord University, Box 2501, NO-7729 Steinkjer, Norway; 9NTNU University Museum, Norwegian University of Science and Technology, NO-7491 Trondheim, Norway; 10Faculty of Biology, Department I, Systematic Botany and Mycology, University of Munich (LMU), Menzinger Straße 67, 80638 München, Germany; 11Institute of Biodiversity, Animal Health and Comparative Medicine, College of Medical, Veterinary and Life Sciences, University of Glasgow, Glasgow G12 8QQ, UK; 12Botany Department, State Museum of Natural History Stuttgart, Rosenstein 1, 70191 Stuttgart, Germany; 13Natural History Museum, Cromwell Road, London SW7 5BD, UK; 14Institute of Botany of the Czech Academy of Sciences, Zámek 1, 252 43 Průhonice, Czech Republic; 15Department of Botany, Faculty of Science, University of South Bohemia, Branišovská 1760, CZ-370 05 České Budějovice, Czech Republic and 16Glacier Bay National Park & Preserve, P.O. -
Taxonomy of Bryoria Section Implexae (Parmeliaceae, Lecanoromycetes) in North America and Europe, Based on Chemical, Morphological and Molecular Data
Ann. Bot. Fennici 51: 345–371 ISSN 0003-3847 (print) ISSN 1797-2442 (online) Helsinki 22 September 2014 © Finnish Zoological and Botanical Publishing Board 2014 Taxonomy of Bryoria section Implexae (Parmeliaceae, Lecanoromycetes) in North America and Europe, based on chemical, morphological and molecular data Saara Velmala1,*, Leena Myllys1, Trevor Goward2, Håkon Holien3 & Pekka Halonen4 1) Botanical Museum, Finnish Museum of Natural History, P.O. Box 7, FI-00014 University of Helsinki, Finland (*corresponding author’s e-mail: [email protected]) 2) UBC Herbarium, Beaty Museum, University of British Columbia, Vancouver, BC V6T 1Z4, Canada (mailing address: Enlichened Consulting Ltd., 5369 Clearwater Valley Road, Upper Clearwater, BC V0E 1N1, Canada) 3) Nord-Trøndelag University College, Serviceboks 2501, N-7729 Steinkjer, Norway 4) Botanical Museum, Department of Biology, P.O. Box 3000, FI-90014 University of Oulu, Finland Received 31 Jan. 2014, final version received 13 June 2014, accepted 18 June 2014 Velmala, S., Myllys, L., Goward, T., Holien, H. & Halonen, P. 2014: Taxonomy of Bryoria section Implexae (Parmeliaceae, Lecanoromycetes) in North America and Europe, based on chemical, morphological and molecular data. — Ann. Bot. Fennici 51: 345–371. Ninety-seven ingroup specimens of Bryoria section Implexae (Parmeliaceae, Leca- noromycetes) were studied using molecular, chemical, morphological and geographic characters. The molecular data included nuclear ribosomal markers (ITS, IGS) and the partial glyceraldehyde-3-phosphate dehydrogenase (GAPDH) gene. In addition to par- simony analyses, a haplotype network was constructed. Phylogenetic analyses strongly supported the monophyly of the section Implexae. The specimens were grouped into two monophyletic clades. Clade 1 encompassed all esorediate material from North America, whereas Clade 2 included both sorediate North American material and all European material. -
Opuscula Philolichenum, 6: 87-120. 2009
Opuscula Philolichenum, 6: 87–120. 2009. Lichenicolous fungi and some lichens from the Holarctic 1 MIKHAIL P. ZHURBENKO ABSTRACT. – 102 species of lichenicolous fungi and 23 lichens are reported, mainly from the Russian Arctic. Four new taxa are described: Clypeococcum bisporum (on Cetraria and Flavocetraria), Echinodiscus kozhevnikovii (on Cetraria), Stigmidium hafellneri (on Flavocetraria) and Gypsoplaca macrophylla f. blastidiata. The following lichenicolous fungi are reported for the first time from North America: Monodictys fuliginosa, Stigmidium microcarpum and Trichosphaeria lichenum. The following lichenicolous fungi and lichens are reported as new to Asia: Arthonia almquistii, Arthophacopsis parmeliarum, Cercidospora lobothalliae, Clypeococcum placopsiphilum, Dactylospora cf. aeruginosa, D. frigida, Epicladonia sandstedei, Everniicola flexispora, Hypogymnia fistulosa, Lecanora luteovernalis, Lecanographa rinodinae, Lichenochora mediterraneae, Lichenopeltella peltigericola, Lichenopuccinia poeltii, Lichenosticta alcicornaria, Phoma cytospora, Polycoccum ventosicola, Roselliniopsis gelidaria, R. ventosa, Sclerococcum gelidarum, Scoliciosporum intrusum, Stigmidium croceae, S. mycobilimbiae, S. stygnospilum, S. superpositum, Taeniolella diederichiana, Thelocarpon impressellum and Zwackhiomyces macrosporus. Twenty-eight species are new to Russia, 15 new to the Arctic, five new to Mongolia and nine new to Alaska. Twenty lichen genera and 31 species are new hosts for various species of lichenicolous fungi. INTRODUCTION This paper deals -
Winter 2009 the California Lichen Society Seeks to Promote the Appreciation, Conservation and Study of Lichens
Bulletin of the California Lichen Society Volume 16 No. 2 Winter 2009 The California Lichen Society seeks to promote the appreciation, conservation and study of lichens. The interests of the Society include the entire western part of the continent, although the focus is on California. Dues categories (in $US per year): Student and fixed income - $10, Regular - $20 ($25 for foreign members), Family - $25, Sponsor and Libraries - $35, Donor - $50, Benefactor - $100 and Life Membership - $500 (one time) payable to the California Lichen Society, PO Box 7775 #21135 , San Francisco, California 94120-7775. Members receive the Bulletin and notices of meetings, field trips, lectures and workshops. Board Members of the California Lichen Society: President: Erin Martin, shastalichens gmail.com Vice President: Michelle Caisse Secretary: Patti Patterson Treasurer: Cheryl Beyer Editor: Tom Carlberg Committees of the California Lichen Society: Data Base: Bill Hill, chairperson Conservation: Eric Peterson, chairperson Education/Outreach: Erin Martin, chairperson Poster/Mini Guides: Janet Doell, chairperson Events/field trips/workshops: Judy Robertson, chairperson The Bulletin of the California Lichen Society (ISSN 1093-9148) is edited by Tom Carlberg, tcarlberg7 yahoo.com. The Bulletin has a review committee including Larry St. Clair, Shirley Tucker, William Sanders, and Richard Moe, and is produced by Eric Peterson. The Bulletin welcomes manuscripts on technical topics in lichenology relating to western North America and on conservation of the lichens, as well as news of lichenologists and their activities. The best way to submit manuscripts is by e-mail attachments or on a CD in the format of a major word processor (DOC or RTF preferred). -
Studies in Lichens and Lichenicolous Fungi: 7
ISSN (print) 0093-4666 © 2011. Mycotaxon, Ltd. ISSN (online) 2154-8889 MYCOTAXON Volume 115, pp. 45–52 January–March 2011 doi: 10.5248/115.45 Studies in lichens and lichenicolous fungi: 7. More notes on taxa from North America James C. Lendemer*1 & Kerry Knudsen2 1Cryptogamic Herbarium, Institute of Systematic Botany, The New York Botanical Garden, Bronx, NY 10458-5126, USA 2The Herbarium, Dept. of Botany & Plant Sciences, University of California, Riverside, CA 92521-0124, USA Correspondence to *: [email protected] & [email protected] Abstract— Acarospora complanata, Fellhaneropsis myrtillicola, and Lecanora stramineoalbida are reported new for North America north of Mexico. Acarospora superfusa is confirmed as occurring in North America. Biatorella rappii is placed in synonymy with Ramonia microspora. Key words— Appalachian Mountains, Magnusson, Sonoran Desert, SE coastal plain. 1. Acarospora complanata H. Magn., Svensk. Bot. Tidskr. 18: 332. 1924. Type: France. Provence-Alpes-Côte D’azur: Var Dist., Massif volcanique de la Courtine, pres Ollisules, 1923, de Crozals (hb. B. de Lesd.[n.v.-presumed destroyed], holotype; UPS! isotype). Acarospora complanata was described from France (Magnusson 1924) and Magnusson recognized it as occurring in Africa and Mexico (Magnusson 1929, 1956). The species forms a brown areolate orbicular thallus with inconspicuous immersed apothecia and an effigurate margin with narrow lobes, a hymenium 80–90 μm high, paraphyses at mid-height mostly 2–2.5 μm in diameter, and a cortex that contains gyrophoric and lecanoric acids (KC+ pink). For a fuller description see Magnusson (1929). Morphologically, the species does not appear related to A. molybdina (Wahlenb.) Trevis, A. macrocyclos Vain., or A.