Loricrin: Past, Present, and Future
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Critical Evaluation of Gene Expression Changes in Human Tissues In
Supplementary Material ‘Critical Evaluation of Gene Expression Changes in Human Tissues in Response to Supplementation with Dietary Bioactive Compounds: Moving Towards Better-Quality Studies’ by Biljana Pokimica and María-Teresa García-Conesa Table S1. Characteristics of the human trials included in this review: study design, type of participants, control and intervention description, dose and duration of treatment, analyses and related bioavailability studies. Study Experimental Characteristics Reference Clinical trial Participants C (Control T (Treatment with Total daily dose, Bioavailability studies: type of sample, design (RCT, (health status, description) bioactive compounds, duration (d or h)1 compounds and (or) metabolites analysed, crossover, gender) products or diet) main results2 parallel) Mix meals and diets Persson I et al., Single arm Healthy, C: not included T: mix Veg T: 250 g, NR 2000 [1] men 21 d Møller P et al., RCT, Healthy, C1: placebo tablet + T: mix FruVeg T: 600 g, Plasma: (NS↑) β-car, T, C2 (post- vs pre-) 2003 [2] parallel, mix energy drink (same 24 d (NC) VitC, T, C2 (post- vs pre-) double blinded amount of sugars as T) (NS↓, 69%) VitC, β-car, C1 (post- vs pre-) (regarding C1 C2: tablet with and C2) antioxidants + minerals (same amount as T) + energy drink (same amount of sugars as T) Almendingen K Randomized, Healthy, C: no proper control T1,2: mix FruVeg T1: 300 g, Plasma: ↑α-car, β-car, T2 vs T1 (post-) et al., 2005 [3] crossover, mix included (comparison T2: 750 g, (NS↑) Lyc, Lut, T2 vs T1 (post-) [4] single -
Keratinization of the Oral Epithelium
Annals of the Royal College of Surgeons of England (I976) vol 58 Keratinization of the oral epithelium David Adams BSC MDS PhD Department of Oral Biology, Welsh National School of Medicine Dental School, Cardiff Summary compare it with the non-keratinizing mucosa The morphology of the keratinizing epi- and the epidermis. I also wish to examine thelia in the mouth is reviewed in the light of some of the mechanisms which control and recent knowledge. There appears to be a spec- regulate keratinization and discuss briefly the trum of degrees of keratinization rather than clinical implications of these. distinct types, and the degree of keratinization Orthokeratinization, in which the surface is reflected in the degree of packing and orien- undergoes cornification as cells lose their stain- tation of tonofilaments. The role of keratohya- ing characteristics and their nuclei, is found on line and other granules in the process is dis- the hard palate and on gingiva, especially cussed and it is suggested that modification where this is firmly bound down to of the cell membrane is an important part of underlyinlg bone (Fig. i). The epithelium keratinization. Although the potential of the lies on a basement membrane which separates various areas in the mucosa is genetically de- it from the connective tissue. Above this there termined and appears early in fetal life, the is a series of more or less well-defined layers. connective tissue exerts an influence on the First comes the germinal layer, one or two extent of keratinization of the surface in a cells thick, then the stratum spinosum, with manner which is not understood. -
Perspectives on Morphologic Approaches to the Study of the Granular Layer Keratinocyte Karen A
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Elsevier - Publisher Connector Biologic Structure and Function: Perspectives on Morphologic Approaches to the Study of the Granular Layer Keratinocyte Karen A. Holbrook, Ph.D. Stephen Rothman [1] wrote: ‘‘Modern dermatology has been built on the of morphologic approaches to understand skin biology, selecting as solid pillars of precise macro- and microscopic observation, accurate an illustration the progress that has been made in understanding recording and meaningful interpretation of the findings. No natural the structure, composition and function of one cell, the granular layer science can exist without direct observation of natural phenomena, and keratinocyte. This approach avoids describing the advances in metho- dermatology has become a great discipline because we have had so dology, and, instead, demonstrates how morphology has promoted the many good observers.’’ He went on to state further that ‘‘y whereas the conceptual development of the topic (Tables I–III). immense knowledge acquired by the classical descriptive methods is still rapidly increasing, the application of experimental methods to derma- WHAT DO MORPHOLOGIC METHODS OFFER? tologic problems is a relatively young and undeveloped approach.’’ AN OVERVIEW These statements acknowledge the importance of observation and The development of morphologic approaches for skin research has description (usually thought of as features of morphology) in clinical involved the development of instrumentation (to a large extent, dermatology and in descriptive dermatologic research, but were made microscopy) methods to prepare tissue for morphologic examination before he could recognize the value of morphology to experimental (e.g., biopsy, separated epidermis and dermis, isolated cells, cell studies as well. -
Microarray Analysis of Novel Genes Involved in HSV- 2 Infection
Microarray analysis of novel genes involved in HSV- 2 infection Hao Zhang Nanjing University of Chinese Medicine Tao Liu ( [email protected] ) Nanjing University of Chinese Medicine https://orcid.org/0000-0002-7654-2995 Research Article Keywords: HSV-2 infection,Microarray analysis,Histospecic gene expression Posted Date: May 12th, 2021 DOI: https://doi.org/10.21203/rs.3.rs-517057/v1 License: This work is licensed under a Creative Commons Attribution 4.0 International License. Read Full License Page 1/19 Abstract Background: Herpes simplex virus type 2 infects the body and becomes an incurable and recurring disease. The pathogenesis of HSV-2 infection is not completely clear. Methods: We analyze the GSE18527 dataset in the GEO database in this paper to obtain distinctively displayed genes(DDGs)in the total sequential RNA of the biopsies of normal and lesioned skin groups, healed skin and lesioned skin groups of genital herpes patients, respectively.The related data of 3 cases of normal skin group, 4 cases of lesioned group and 6 cases of healed group were analyzed.The histospecic gene analysis , functional enrichment and protein interaction network analysis of the differential genes were also performed, and the critical components were selected. Results: 40 up-regulated genes and 43 down-regulated genes were isolated by differential performance assay. Histospecic gene analysis of DDGs suggested that the most abundant system for gene expression was the skin, immune system and the nervous system.Through the construction of core gene combinations, protein interaction network analysis and selection of histospecic distribution genes, 17 associated genes were selected CXCL10,MX1,ISG15,IFIT1,IFIT3,IFIT2,OASL,ISG20,RSAD2,GBP1,IFI44L,DDX58,USP18,CXCL11,GBP5,GBP4 and CXCL9.The above genes are mainly located in the skin, immune system, nervous system and reproductive system. -
Keratinization and Its Disorders
Oman Medical Journal (2012) Vol. 27, No. 5: 348-357 DOI 10. 5001/omj.2012.90 Review Article Keratinization and its Disorders Shibani Shetty, Gokul S. Received: 03 May 2012 / Accepted: 08 July 2012 © OMSB, 2012 Abstract Keratins are a diverse group of structural proteins that form the epithelium (buccal mucosa, labial mucosa) and specialized intermediate filament network responsible for maintaining the mucosa (dorsal surface of the tongue).2 An important aspect structural integrity of keratinocytes. In humans, there are around of stratified squamous epithelia is that the cells undergo a 30 keratin families divided into two groups, namely, acidic and terminal differentiation program that results in the formation basic keratins, which are arranged in pairs. They are expressed in of a mechanically resistant and toughened surface composed of a highly specific pattern related to the epithelial type and stage of cornified cells that are filled with keratin filaments and lack nuclei cellular differentiation. A total of 54 functional genes exist which and cytoplasmic organelles. In these squames, the cell membrane codes for these keratin families. The expression of specific keratin is replaced by a proteinaceous cornified envelope that is covalently genes is regulated by the differentiation of epithelial cells within cross linked to the keratin filaments, providing a highly insoluble the stratifying squamous epithelium. Mutations in most of these yet flexible structure that protects the underlying epithelial cells.1 genes are now associated with specific tissue fragility disorders Keratinization, also termed as cornification, is a process which may manifest both in skin and mucosa depending on the of cytodifferentiation which the keratinocytes undergo when expression pattern. -
Differentially Expressed Late Constituents of the Epidermal Cornified Envelope
Differentially expressed late constituents of the epidermal cornified envelope D. Marshall, M. J. Hardman, K. M. Nield, and C. Byrne* School of Biological Sciences, University of Manchester, 3.239 Stopford Building, Oxford Road, Manchester M13 9PT, United Kingdom Communicated by Elaine Fuchs, University of Chicago, Chicago, IL, September 17, 2001 (received for review June 23, 2001) Barrier activity of skin and internal barrier-forming epithelial There have been persistent reports of additional genes͞ linings are conferred by a lipid-corneocyte structure (stratum proteins with structures homologous to cornified envelope pro- corneum in skin).The integrity of the corneocytes depends on the teins. These include XP5, XP31, XP32 (12), the newly identified outer cornified envelope and is essential for maintenance of barrier component of the EDC (NICE-1; ref. 13), protein products of a function. During epidermal development and differentiation, pro- range of annotated expressed sequence tags (ESTs; ref. 14), and teins are sequentially incorporated into the envelope via action of Eig3 protein (15). We show that at least some of these proteins epidermal transglutaminases in a well documented process. How- are encoded by a previously undetected gene cluster in the ever, recent knockouts of major cornified envelope constituents human epidermal differentiation complex (EDC) at 1q21 (16), have failed to disrupt barrier function significantly, suggesting that with homologues detected in mouse (12, 14, 16). We show that additional unidentified components are involved. We report a new these genes encode proteins, which are new cornified envelope gene cluster in the epidermal differentiation complex at human constituents distinct from SPRRs. Like SPRRs, the genes are 1q21 encoding a family of 18 proteins that are substrates for differentially expressed in different types of barrier epithelia. -
University of California, San Diego
UC San Diego UC San Diego Electronic Theses and Dissertations Title The post-terminal differentiation fate of RNAs revealed by next-generation sequencing Permalink https://escholarship.org/uc/item/7324r1rj Author Lefkowitz, Gloria Kuo Publication Date 2012 Peer reviewed|Thesis/dissertation eScholarship.org Powered by the California Digital Library University of California UNIVERSITY OF CALIFORNIA, SAN DIEGO The post-terminal differentiation fate of RNAs revealed by next-generation sequencing A dissertation submitted in partial satisfaction of the requirements for the degree Doctor of Philosophy in Biomedical Sciences by Gloria Kuo Lefkowitz Committee in Charge: Professor Benjamin D. Yu, Chair Professor Richard Gallo Professor Bruce A. Hamilton Professor Miles F. Wilkinson Professor Eugene Yeo 2012 Copyright Gloria Kuo Lefkowitz, 2012 All rights reserved. The Dissertation of Gloria Kuo Lefkowitz is approved, and it is acceptable in quality and form for publication on microfilm and electronically: __________________________________________________________________ __________________________________________________________________ __________________________________________________________________ __________________________________________________________________ __________________________________________________________________ Chair University of California, San Diego 2012 iii DEDICATION Ma and Ba, for your early indulgence and support. Matt and James, for choosing more practical callings. Roy, my love, for patiently sharing the ups and downs -
Evaluation on Reprogramed Biological Processes in Transgenic Maize
www.nature.com/scientificreports OPEN Evaluation on reprogramed biological processes in transgenic maize varieties using transcriptomics and metabolomics Wei Fu1, Pengyu Zhu1, Mingnan Qu2, Wang Zhi1, Yongjiang Zhang1, Feiwu Li3* & Shuifang Zhu1* Genetic engineering (GM) has great potential to improve maize productivity, but rises some concerns on unintended efects, and equivalent as their comparators. There are some limitations through targeted analysis to detect the UE in genetically modifed organisms in many previous studies. We here reported a case-study on the efects of introducing herbicides and insect resistance (HIR) gene cassette on molecular profling (transcripts and metabolites) in a popular maize variety Zhengdan958 (ZD958) in China. We found that introducing HIR gene cassette bring a limited numbers of diferential abundant genes (DAGs) or diferential abundant metabolites (DAMs) between transgenic events and non-transgenic control. In contrast, averaged 10 times more DAGs and DAMs were observed when performed comparison under diferent growing environments in three diferent ecological regions of China than the numbers induced by gene efects. Major biological pathways relating to stress response or signaling transduction could explain somehow the efects of growing environments. We further compared two transgenic events mediated ZD958 (GM-ZD958) with either transgenic parent GM-Z58, and other genetic background nonGM-Z58, nonGM-ZD958, and Chang7-2. We found that the numbers of DAGs and DAMs between GM-ZD958 and its one parent maize variety, Z58 or GM-Z58 is equivalent, but not Chang7-2. These fndings suggest that greater efects due to diferent genetic background on altered molecular profling than gene modifcation itself. This study provides a case evidence indicating marginal efects of gene pleiotropic efects, and environmental efects should be emphasized. -
Abnormal Epidermal Keratinization in the Repeated Epilation Mutant Mouse
Abnormal Epidermal Keratinization in the Repeated Epilation Mutant Mouse KAREN A. HOLBROOK, BEVERLY A . DALE, and KENNETH S . BROWN Departments of Biological Structure, Medicine (Dermatology), and Periodontics, University of Washington, Seattle, Washington 98195, and the Laboratory of Developmental Biology and Anomalies, National Institute of Dental Research, National Institutes of Health, Bethesda, Maryland 20205 ABSTRACT Repeated epilation (Er) is a radiation-induced, autosomal, incomplete dominant mutation in mice which is expressed in heterozygotes but is lethal in the homozygous condition . Many effects of the mutation occur in skin : the epidermis in Er/Er mice is adhesive (oral and nasal orifices fuse, limbs adhere to the body wall), hyperplastic, and fails to undergo terminal differentiation . Skin from fetal +/+, Er/+ and Er/Er mice at ages pre- and postkeratin- ization examined by light, scanning, and transmission electron microscopy showed marked abnormalities in tissue architecture, differentiation, and cell structure ; light and dark basal epidermal cells were separated by wide intercellular spaces, joined by few desmosomes, and contained phagolysosomes . The numbers of spinous, granular, and superficial layers were highly variable within any given region and among various regions of the body. In some areas, 2-8 layers of granular cells, containing large or diminutive keratohyalin granules, extended to the epidermal surface; in others, the granular layers were covered by several layers of partially keratinized or nonkeratinized cells . In rare instances, a single or small group of cornified cells was present among the granular layers but was not associated with the epidermal surface . Both the granular and non keratinized/partially keratinized upper epidermal layers in Er/Er skin gave positive immunofluorescence with antiserum to the histidine-rich, basic protein, filaggrin . -
Cystatin-B Negatively Regulates the Malignant Characteristics of Oral Squamous Cell Carcinoma Possibly Via the Epithelium Proliferation/ Differentiation Program
ORIGINAL RESEARCH published: 24 August 2021 doi: 10.3389/fonc.2021.707066 Cystatin-B Negatively Regulates the Malignant Characteristics of Oral Squamous Cell Carcinoma Possibly Via the Epithelium Proliferation/ Differentiation Program Tian-Tian Xu 1, Xiao-Wen Zeng 1, Xin-Hong Wang 2, Lu-Xi Yang 1, Gang Luo 1* and Ting Yu 1* 1 Department of Periodontics, Affiliated Stomatology Hospital of Guangzhou Medical University, Guangzhou Key Laboratory of Basic and Applied Research of Oral Regenerative Medicine, Guangzhou, China, 2 Department of Oral Pathology and Medicine, Affiliated Stomatology Hospital of Guangzhou Medical University, Guangzhou Key Laboratory of Basic and Applied Research of Oral Regenerative Medicine, Guangzhou, China Disturbance in the proteolytic process is one of the malignant signs of tumors. Proteolysis Edited by: Eva Csosz, is highly orchestrated by cysteine cathepsin and its inhibitors. Cystatin-B (CSTB) is a University of Debrecen, Hungary general cysteine cathepsin inhibitor that prevents cysteine cathepsin from leaking from Reviewed by: lysosomes and causing inappropriate proteolysis. Our study found that CSTB was Csongor Kiss, downregulated in both oral squamous cell carcinoma (OSCC) tissues and cells University of Debrecen, Hungary Gergely Nagy, compared with normal controls. Immunohistochemical analysis showed that CSTB was University of Debrecen, Hungary mainly distributed in the epithelial structure of OSCC tissues, and its expression intensity *Correspondence: was related to the grade classification. A correlation analysis between CSTB and clinical Gang Luo [email protected] prognosis was performed using gene expression data and clinical information acquired Ting Yu from The Cancer Genome Atlas (TCGA) database. Patients with lower expression levels of [email protected] CSTB had shorter disease-free survival times and poorer clinicopathological features Specialty section: (e.g., lymph node metastases, perineural invasion, low degree of differentiation, and This article was submitted to advanced tumor stage). -
Analysis of the Ultraviolet B Response in Primary Human Keratinocytes Using Oligonucleotide Microarrays
Analysis of the ultraviolet B response in primary human keratinocytes using oligonucleotide microarrays Angela Sesto*, Manuel Navarro*†, Frank Burslem‡, and Jose´L. Jorcano* *Department of Molecular and Cell Biology, Centro de Investigaciones Energe´ticas, Medioambientales y Tecnolo´gicas (CIEMAT), Avenida Complutense 22, 28040 Madrid, Spain; and ‡Pfizer Global Research and Development, Sandwich, Kent CT13 9NJ, United Kingdom Communicated by A. Garcia-Bellido, Autonomous University of Madrid, Madrid, Spain, December 17, 2001 (received for review October 19, 2001) UV radiation is the most important environmental skin aggressor, To understand the mechanisms of UV response, we sought to causing cancer and other problems. This paper reports the use of obtain the transcriptional profile of primary keratinocytes after oligonucleotide microarray technology to determine changes in UVB irradiation. Cultured human epidermal keratinocytes were gene expression in human keratinocytes after UVB treatment. treated with three UV doses, and samples were collected at Examination of the effects of different doses at different times different intervals. Oligonucleotide microarrays containing over after irradiation gave a global picture of the keratinocyte response 6,000 genes (HuGeneFL, Affymetrix, Santa Clara, CA) were to this type of insult. Five hundred thirty-nine regulated transcripts used to quantitatively assess changes in gene expression. The were found and organized into nine different clusters depending subset of regulated transcripts was classified into self-organizing on behavior patterns. Classification of these genes into 23 func- maps according to their different behaviors. Biological functions tional categories revealed that several biological processes are were assigned to these genes, which were then correlated with globally affected by UVB. -
Augmentation of Keratinocyte Differentiation by the Epidermal Mitogen, 8-Promo-CAMP
Experimental Cell Research 149 (1983) 215-226 Augmentation of Keratinocyte Differentiation by the Epidermal Mitogen, 8-Promo-CAMP PHILIP S. L. TONG and CYNTHIA L. MARCELO* Department ,of Dermatology, University of Michigan Medical School, Ann Arbor, MI 48109, USA The effect of the epidermal mitogen, 8bromo-CAMP, on keratinocyte differentiation was studied. A 3X10d4 M dose of I-bromo-CAMP was added to primary neonatal mouse epidermal keratinocyte cultures that slowly proliferate, stratify and differentiate over 2-3 weeks time. [3H]Thymidine autoradiography coupled with an NH4Cl plus reducing agent technic which separates basal and differentiating keratinocytes was used to determine the target cell for the I-bromo-CAMP mitogenic effect. A histologic stain and a four buffer protein extraction protocol, in conjunction with PAGE and fluorographic technics, were used to assess the differentiation of the cultures. The data indicated that 8-bromo-CAMP primarily stimulated the proliferation of the basal cell monolayer. Simultaneous with the mitogenic effect was an increase in the production of keratohyalin granule, keratin and cell envelope proteins, which are specific markers of epidermal differentiation. The results indicate that keratinocytes stimulated by the epidermal mitogen I-bromo-CAMP simulta- neously express differentiation-related processes. The effect of CAMP on proliferation appears to be cell-specific and concentra- tion-dependent. Numerous studies report that large increases in intracellular CAMP inhibit proliferation [ 1, 21, an event often accompanied by stimulation of a number of cell functions and of differentiation [3-8]. Almost as numerous are investigations demonstrating the hyperproliferative effect of CAMP on a number of cell types [9-141.