(October 2013) CURRICULUM VITAE

NAME Jelle Atema e-mail: [email protected]

ADDRESS Boston University Telephone 617-358-4392 (office) Biology Department 617-353-2432 (dept) Marine Program 617-358-4588 (lab) 5, Cummington Street Boston MA 02215

EDUCATION

Candidate University of Utrecht, Netherlands 1962 Biology Doctorandus University of Utrecht, Netherlands 1966 Sensory Biology and Physics Ph.D. University of Michigan 1969 Sensory Biology

ACADEMIC AND RESEARCH EXPERIENCE

1984- Professor, Biology Department and Marine Science Program, Boston University.

2007- Adjunct Scientist, Biology Dept., Woods Hole Oceanographic Institution.

2006- 2010 Adjunct Senior Scientist, Marine Biological Laboratory, Woods Hole

1994-2010 Research Fellow, Department of Cognitive and Neural Systems, Boston University.

1990-2004 Director, Boston University Marine Program, Woods Hole.

1974-1984 Associate Professor, Marine Program, Biology Department, Boston University.

1970-1974 Assistant Scientist, Woods Hole Oceanographic Institution, Chemistry Department.

1966-1970 Research Associate, University of Michigan, School of Natural Resources and Medical School.

1960-1966 Research and Teaching Assistant, University of Utrecht.

AWARDS AND HONORS

Fellow, Alexander Von Humboldt Foundation (Senior Research Prize), 1996 Fellow, John Simon Guggenheim Foundation, 1987 Fellow, American Association for the Advancement of Science, 1976 Manheimer Lecture, Monell Chemical Senses Center, Philadelphia, 1986 Friday Evening Lecture, Marine Biological Laboratory, Woods Hole, 1982 First Annual Distinguished Lecture in Marine Neurosciences, University of Miami, FL, 2000

OTHER PROFESSIONAL EXPERIENCE

1998 Faculty, Workshop on Aquatic Chemical Ecology, Lund, Sweden. 1997 Guest Professor, University of Konstanz, Germany. 1996 Guest Professor, University of New South Wales, Sydney, Australia. 1990 Co-Director, Short Course in Chemical Signals, Marine Biological Laboratory, Woods Hole. 1984 Faculty Instructor, Shanghai, China. UNESCO International Training Course, Chemoreception in Aquatic Organisms. 1982 Faculty Instructor, Kotor, Yugoslavia. UNESCO International Training Course, Chemoreception in Aquatic Organisms. 1979-1980 Guest Professor, University of Regensburg, West Germany. Chemoreception and behavior of crayfish. 1976-1977 Research Associate, University of Hawaii. Chemoreception and behavior of tuna. 1974-1983 Instructor-in-Chief, Behavior Course, Marine Biological Laboratory, Woods Hole.

PROFESSIONAL SOCIETIES

American Association for the Advancement of Science Society for Neuroscience International Society for Chemical Ecology International Society for Neuroethology Society for Integrative and Comparative Biology (American Society of Zoologists) Behavior Society (Co-Chairman, N.E. Regional Meeting) Association for Chemoreception Sciences (Freeman Award Committee 1982, 1985; Program Chair 1986; Awards Committee 2006) Crustacean Society (1980-1985) European Chemoreception Research Organization Marine Biological Laboratory, Member of the Corporation (1974- )

OTHER PROFESSIONAL ACTIVITIES Current: Editorial Board, Primary Sensory Neuron, 1996- Editorial Board, Marine and Freshwater Behavior and Physiology, 1995- MIT Sea Grant, Advisory Board, 1996-

Past: Editorial Board, Journal of Experimental Marine Biology & Ecology, 1988-1992 Editorial Board, Physiological Zoology, 1988-1992 Editorial Board, Sensory Processes, 1980-1982 Editorial Board, Behavioral Processes, 1978-1984 Guest Editor, OCEANUS Magazine, "Senses of the Sea", Fall 1980 Co-Editor, Sensory Biology of Aquatic , Springer Verlag, 1987-1988 Co-Editor, Proceedings International Symposium on Olfaction and Taste IX, 1987 Editor, Abstracts Chemical Senses, 1986 Co-Organizer, Northeast Animal Behavior Society Meetings, Woods Hole, 1979 Organizer, Symposium "Search Image", October 1979 Co-Organizer, Symposium on "Sensory Biology of Aquatic Animals", Sarasota, June 1985 Co-Organizer, International Symposium on Olfaction and Taste, Snowmass,Colorado, July 1986 Organizer, Winter Animal Behavior Conference, January 1990 Organizer, Mini-symposium on Temporal Processing of Chemical Signals, AChemS 1994 National Science Foundation, Review Panel, Animal Sensation and Movement, 2006 National Science Foundation, Review Panel, Psychobiology Program, 1983-1985 National Science Foundation, Review Panel, Experimental Program to Stimulate Competitive Research, 1983 National Science Foundation, Task Group on Invertebrate Zoology Teaching, 1992 National Research Council, Committee on Improved Models for Toxicity Testing for Human Health Hazard Assessment, 1983 International Union of Physiologists, Glossary Committee, Chemical Senses, 1977-1980 Sea Education Association (SEA), Academic Advisory Council Doreen Grace Brain Center, Scientific Advisory Board, 1989-2006 Northeast Marine Environmental Institution, Board of Directors Masschusetts Bay Community College, Biotechnology Advisory Board

Boston University:

Marine Program Director, 1990-2004 Neurobiology Search Committee, 1990 (Chair) 2 Ecology Search Committee, 1990 (Chair) Marine Biology Search Committee, 1993 (Chair) Marine Program Director Search Committee, 1986

Biology Department Curriculum committee 1987-1990; 2010- Chairman’s Advisory Committee, 1989-2003, 2006-2007 Graduate Committee, 1983-1987, 1990 –1996, 2000-2003 Promotion and Tenure Committee, 1986-1987, 1998-2003, 2012 Merit Review Committee, 1988-1998 Neurobiology Search Committee, 1979 (Chair), 1986 Ad-hoc Performance Review Committee, 1986-1988

College of Liberal Arts IACUC committee 2012- Ad-hoc Tenure Committee, 1979 Neuroscience Director Search Committee, 1993

Marine Biological Laboratory:

BUMP Director 1990-2004 Science Council, 1999-2004 (elected for two consecutive terms) Interim Science Council, 1993 Trustee, 1985-1993 (elected for two 4-year terms) Trustees Nominating Committee, 1990, Chair 1991 Trustees Facilities & Capital Equipment Committee, 1993-1996 Year Round Scientists Council (Co-Chair), 1988-1990 (elected) Education Task Force 2001-2002 Research Services Committee, 1980-1984 Housing, Day Care and Food Services Committee (Chair), 1983-1989 Day Care Committee 1996-2000 Ad-Hoc Trustees Housing Committee, 1984-1985 Centennial Committee, Subcommittee on Cultural Events (Chair), 1986-88 Advisor, Futures-in-Science Program for High School Students, 1986 Pre-college Science Education, 1993 Computer Advisory Committee, 1993-1998 Seminar Committee (Chair), 1988-1989

COMMUNITY ACTIVITIES Performer: MBL Centennial Concert with J.-P. Rampal and Colorado Quartet, 1988 Cape & Islands Music Festival, 1988 Soundfest (Colorado Quartet), 1991 Cape Cod Symphony Orchestra, First Prize Music Competition, 1974, Flute Soloist with Orchestra, 1974, 1988 BUMP-MBL Concert with Samuel Baron and Colorado Quartet, 1996 BUMP-MBL Concert with the Miro String Quartet, 1998 BUMP-MBL Concert and CD recording, 2001 Woods Hole Library Chamber Music Society: Annual concerts 1980-2002 MBL Annual Summer Concerts 1970-2005 Falmouth Chamber Orchestra, Conductor 1980-1985 Committee for Performing Arts Center, Falmouth, Chairman, 1982-1984 Massachusetts Council on Arts and Humanities, Panel Review, Judge Falmouth Music Association, President, 1972-1973, 1982-1984 Falmouth Academy, Commencement speaker 1983 Falmouth Academy, Science Fair Judge, 1990- Mullen-Hall Elementary School, Falmouth, guest lecturer and performer 1997-8 Winsor School, Boston, guest lecturer 1990 Cambridge School, Weston, guest lecturer 1993, panelist 2007 Beaver Country Day School, Chestnut Hill, guest lecturer 2005 3 (list not continued)

OTHER RESEARCH

The roots of human culture: Reconstruction of the world's oldest musical instruments: a 53,000-year-old Neanderthal flute from Slovenia made from a cave bear femur, a 30,000-year-old deer bone flute from the Les Eyzies region and a 4,000-year-old vulture bone flute from the Ardeche region, both in France. Recordings on paleo- and neolithic flute reconstructions are in permanent exhibits at the American Museum of Natural History, New York and the Archaeological Museum of Florac, France. A lecture and press conference at the AAAS-2000 meetings in Washington, DC and a paper in SCIENCE magazine (Jan 5, 2001) resulted in world-wide press coverage in all the media. A book and museum exhibit on the subject are underway.

BioMusic: The sounds of Nature and the Nature of Sound. A national initiative to explore the roots of music in Nature's Sounds and to bring the information into the Middle School Curriculum. Wild Music: A 2007-2008 exhibit at the Minnesota Science Museum in which the flute reconstructions play an important role. The exhibit is in the Boston Science Museum 2009-2010.

MAJOR RESEARCH GRANTS AWARDED (since 1984)

(from 1970-1983 uninterrupted research funding of about $100,000 annually from U.S. Government Agencies and Private Foundations)

1982-85 Whitehall Foundation Resolving power of narrowly tuned chemoreceptor $123,000 cells: signal detection in a noisy environment

1985-87 Whitehall Foundation Resolving power of narrowly tuned chemoreceptor $84,400 cells: signal detection in a noisy environment

1984-86 NSF BNS 84-13661 Sex pheromones and courtship in lobsters $36,760

1984-86 NSF BNS 84-11969 Chemical signal detection: physiological and behavioral $90,000 functions of chemoreceptors in a noisy environment

1985-88 NSF BNS 85-12585 Chemical signal detection: functions of $274,000 chemoreceptors in a noisy environment

1985-87 EPA Acid stress on chemically mediated behavior in crayfish $111,165

1987-88 Guggenheim Foundation Chemical signals $23,000

1988-92 NSF BNS 88-12952 Chemical signal detection: filter properties of $453,909 chemoreceptor organs

1992-1995 NSF IBN-9212650 Olfactory Sampling and Orientation in Turbulent $253,245 Odor Plumes

1991-1996 NIH 2P01NS25915-04A1 Chemical signals regulating social behavior $767,942

1993-1996 NSF IBN-9222774 Filter properties of chemoreceptor cells $325,824

1994-1997 NSF OCE-9315083 Characterization of aquatic odor signals used for $46,000 chemosensory orientation by marine crustaceans

1994-1997 NSF BES-9315791 Search strategies for locating underwater odor $290,944 sources: Robots and lobster.

1996 NOAA/MIT Sea Grant Robotic investigations of lobster chemoreception algorithms $9,999

1996-1997 NSF IBN-9642059 Filter properties of chemoreceptor cells $80,000 4

1996-1997 NSF IBN-9642059 REU: Filter properties of chemoreceptor cells $5,000

1996-1997 NSF BES-9641567 REU: Search strategies for locating underwater $10,000 odor sources: robots and lobsters

1997-1999 NSF IBN-9723542 Bimodel chemical and mechanical signal detection: filter properties of chemo and mechanoreceptor cells $200,001

1998 NSF IBN-9723542 REU of filter grant $5,000

1996-1999 NSF IBN-9631665 Computational investigations of temporal odor $239,986 processing mechanisms to serve chemotactic orientation: Olfactory guided orientation of the American lobster Homarus americanus

1998-1999 NSF IBN-9631665 REU: Computational investigations of temporal odor $4,600 processing mechanisms to serve chemotactic orientation: Olfactory guided orientation of the American lobster Homarus americanus 1998-2000 ONR Odor Plume Tracing: Lobster-inspired algorithms $499,999

2000-2001 ONR Expanded scope of Odor Plume Tracing: Robot $118,794 testing in flumes at Cornell and Georgia Tech $124,000

2001-2005 NSF (IBN) Chemo-hydrodynamic signal detection $322,000

2003-2004 DARPA TRACKING AND STEERING $599,990

2005-2008 NSF OCE-0452988 COLLABORATIVE RESEARCH: CONNECTIVITY OF REEF $247,049 FISH POPULATIONS; MECHANISMS AND CONSEQUENCES

2007-2009 NOAA, SEA GRANT The spread of lobster shell disease: genetic and social barriers $ 132,000

2009 NOAA, SEA GRANT The spread of lobster shell disease: genetic and social barriers $ 16,715

2009-2012 NOAA S-K Connectivity between Offshore and Inshore Lobster Populations in Southern New England: Genetics and Morphology $ 243,493

2009-2010 NSF IOS-0843440 REU supplement $ 4,000

2011-2012 NSF IOS-0843440 REU supplement $ 4,000

CURRENT RESEARCH GRANTS

2009-2013 NSF IOS-0843440 Collaborative Research: Multisensory guidance of marine animal navigation and prey capture $ 295,939

2013-2014 ATLANTIC LOBSTER SUSTAINABILITY FOUNDATION Population structure $ 25,000

CURRENT COURSES 2013- CC106: Core Curriculum Natural Science: 50 freshman students, lectures, discussions 1984-current BI 563 (was 463/663) Sensory Biology: one-month intensive lab/research course for advanced undergraduate and graduate students; lectures, labs, research projects; behavior, neurobiology, fluid dynamics. PREVIOUS COURSES: 1990-1994; 2007-2011 BI 260 Marine Biology: general introduction, 100 students; lectures, discussions. 1984-2006 BI 478/678 Experimental Biology: one-month internship in experimental design and research for 12 advanced undergraduate and graduate students, including data collecting, analysis and presentation. 5 1984-2002 BI 582 Graduate Seminars: current literature 1975-1990 BI 520 Sensory Biology of Aquatic Animals: graduate & advanced undergraduate course; 24 students; lecture, discussions, essays.

GRADUATE STUDENTS (year of Degree award) Ph.D. M.A. Stewart Jacobson 1978** Daniel Stenzler 1975 Charles Derby 1981** Mark Winston 1975** William Langbauer 1982** Eric Garnick 1975+** Bruce Bryant 1984** Linda Ashkenas 1979 John Heinen 1984** Leonor Botero 1980+** Bruce Johnson 1985** Theodore Dourdeville 1981+** Jacqueline Webb 1987** Dana Devine 1981+** Paola Borroni Ferme 1987** Linda Handrich 1986 Diana Barshaw 1987** Sara Ellis 1987+* Thomas Trott 1989** Frank Corotto 1989+** Susan Wood 1989* Chong Chen 1989+ Paul Moore 1990** Nathaniel Scholz 1991+** Kari Lavalli 1991** Anna Weinstein 1991 Carl Merrill 1991** Dan Lindstrom 1991+** Diane Cowan 1992** Ilana Strubel 1991+ Charles Mazel 1993** Boris Bohachevsky 1992+ Simon Mosiach 1994** Kate Lindner 1993+ George Gomez 1994** Kim Wittenberg 1996 Gires Usup 1994** Claire Balint 1996+* Christa Karavanich 1995** Ruth Herrold 1997+** Paul Bushmann 1995** David Martel 2002 Lynda Farley 1997** Tracy Pugh 2002+ Jonathon Dale 2000 Erin Summers 2002 Vanessa Miller-Sims 2007* James Estrada 2002+ Nathan Rycroft 2014 Karen Morschauser 2003 John Majoris 2014 Molly Steinbach 2005 Jayne Gardiner 2006+ Kristin Radcliffe 2011 Ashley Jennings 2013

+ continued in Ph.D. program elsewhere * continued in postdoctoral position elsewhere ** professor/scientist elsewhere

RESEARCH FACULTY: Rainer Voigt (1993-1997, 1999-2001) Frank Grasso (2000-2001)

POSTDOCTORAL FELLOWS

Rainer Voigt, Ph.D. University of Gottingen (1984-1993) Ann Jane Tierney, Ph.D. University of Toronto (1985-1987) Hortense Gerardo, M.D. University of Santo Thomas, (1989-90) Thomas Breithaupt, Ph.D. University of Konstanz (1992-1994) Jennifer Basil, Ph.D. University of Massachusetts Amherst (1992-1999) Thomas Trott, Ph.D. Boston University (1994-1998) Frank Grasso, Ph.D. University of Massachusetts Amherst (1994-2000) Rod O’Connor, PhD. (2010-2012)

DISTINCTION STUDENTS (Undergraduate Honors Thesis)

Jennifer Casterline 1990 Keith Bayha 1994 6 Nathaniel Scholz 1990 Heidi Wennemer 1994 Adele Pile 1991 Ann Leonard 1994 Kirsten Poling 1991 Liat Kaplan (Harvard U.) 1994 Matt Harris 1992 Sheila Patek (Harvard U.) 1994 Robert Ziemba 1992 Daphne Carlson 1995 Eric Annis 1992 Carla Guenther (WPI) 1996 Barbara Herr 1993 Heather Miller (WPI) 1996 Kara Yopak 2002 Margaret Johnson 2003 Debra Giglia 2005 Daniel Hashimoto 2008 Erin McDougal 2009 Hillary Braverman 2010 Reena Clements 2013

HIGH SCHOOL INTERNS Senior Thesis: Stacy Burns, Boston University Academy 2011-13 Oliver Newman, Falmouth Highschool 2009-2013 Catherine Biancchi, Falmouth Academy-2008-2012

Hope Allison, Falmouth Academy 2012- Sami Robideau, Falmouth Academy 2012-

PUBLICATIONS

Primary Research Papers, Review Papers, and Book Chapters

1. Todd, J.H., J. Atema and J.E. Bardach. 1967. Chemical communication in social behavior of a fish, the yellow bullhead (Ictalurus natalis). Science 158:672-673.

2. Von Baumgarten, R.J., J. Atema, T. Hukuhara, M. Rocker. 1969. Behavioral responses to short periods of lowered gravitational force in blind goldfish. Space Life Sciences 1:554-564.

3. Atema, J. 1969. Chemical senses in feeding and social behavior of the catfish, Ictalurus natalis. Ph.D. Thesis, Univ. of Michigan, 147 pp.

4. Atema, J., J.H. Todd and J.E. Bardach. 1969. Olfaction and behavioral sophistication in fish. In: Third International Symposium on Olfaction and Taste, C. Pfaffman, ed. Rockefeller University Press, New York, pp. 241-251.

5. Bardach, J.E. and J. Atema. 1971. The sense of taste in . In: Handbook of Sensory Physiology, Volume IV, 2 "Chemical Senses: Taste", L.M. Beidler, ed. Springer-Verlag, Berlin-Heidelberg-New York, pp. 293-336.

6. Atema, J. 1971. Structures and functions of the sense of taste in the catfish (Ictalurus natalis). Brain, Behav. Evol. 4:273-294.

7. Von Baumgarten, R.J., G. Baldrighi, J. Atema and G.L. Shillinger. 1971. Behavioral responses to linear acceleration in blind goldfish. Space Life Sciences 3:25-33.

8. Atema, J. and D.G. Engstrom. 1971. Sex pheromone in the lobster, Homarus americanus. Nature 232:261-263.

9. Todd, J.H., J. Atema and D.B. Boylan. 1972. Chemical communication in the sea. Marine Technol. Soc. J. 6:54-56.

10. Atema, J. 1973. Microtubule theory of sensory transduction. J. Theor. Biol. 38:l8l-190.

11. Atema, J., D.B. Boylan, S. Jacobson and J.H. Todd. 1973. The importance of chemical signals in stimulating behavior of marine organisms: Effects of altered environmental chemistry on animal communication. In: Bioassay Techniques and Environmental Chemistry, G.E. Glass, ed. Ann Arbor Sci. Publ., Ann Arbor, Michigan, pp. 177- 197. 7

12. Atema, J. and R.B. Gagosian. 1973. Behavioral responses of male lobsters to ecdysones. Mar. Behav. Physiol. 2:15-20.

13. Gagosian, R.B. and J. Atema. 1973. Behavioral responses of male lobsters to ecdysone metabolites. Mar. Behav. Physiol. 2:115-120.

14. Atema, J. and L.S. Stein. 1974. Effects of crude oil on the feeding behaviour of the lobster Homarus americanus. Environ. Pollut. 6:77-86.

15. Olla, B.L., J. Atema, et al. 1974. Behavioral bioassays. In: Marine Biooassays, Proceedings of Workshop on Marine Bioassays, April 1974. Marine Technology Society, Washington, D.C., 31 pp.

16. Atema, J. and G.D. Burd. 1975. A field study of chemotactic responses of the marine mud snail, Nassarius obsoletus. J. Chem. Ecol. 1:243-251.

17. Atema, J. 1975. Stimulus transmission along microtubules in sensory cells: an hypothesis. In: Microtubules and Microtubule Inhibitors, M. Borgers and M. de Brabander, eds. North-Holland Publishing Company, Amsterdam, pp. 247-257.

18. Atema, J. 1976. Sublethal effects of petroleum fractions on the behavior of the lobster, Homarus americanus, and the mud snail, Nassarius obsoletus. In: Estuarine Processes, Vol. I: Uses, Stresses, and Adaptation to the Estuary, M. Wiley, ed. Academic Press, New York, pp. 302-312.

19. Stenzler, D. and J. Atema. 1977. Alarm response of the marine mud snail, Nassarius obsoletus: specificity and behavioral priority . J. Chem. Ecol. 3:159-171.

20. Atema, J. and D. Stenzler, 1977. Alarm substance of the marine mud snail, Nassarius obsoletus: biological characterization and possible evolution. J. Chem. Ecol. 3:173-187.

21. Atema, J. 1977. The effects of oil on lobsters. Oceanus 20:67-73.

22. Atema, J. 1977. Functional separation of smell and taste in fish and crustacea. In: Olfaction and Taste VI, J. Le Magnen and P. MacLeod, eds. Information Retrieval Ltd., London, pp. 165-174.

23. Atema, J., E. B. Karnofsky and S. Oleszko-Szuts. 1979. Lobster behavior and chemoreception: Sublethal effects of number 2 fuel oil. In: Advances in Marine Environmental Research, F.S. Jacoff (ed.) Environmental Research Laboratory, Office of Research and Development, U.S. Environmental Protection Agency, Narragansett, Rhode Island, pp. 122-134.

24. Atema, J., S. Jacobson, E. Karnofsky, S. Oleszko-Szuts and L. Stein. 1979. Pair formation in the lobster, Homarus americanus: behavioral development, pheromones and mating. Mar. Behav. Physiol. 6:277-296.

25. Atema, J. 1980. Chemical senses, chemical signals and feeding behavior in fishes. In: Fish behavior and its use in the capture and culture of fishes. J.E. Bardach, J.J. Magnuson, R.B. May and J.M. Reinhart, eds. ICLARM Conference Proceedings 5, International Center for Living Aquatic Resources Management, Manila, Philippines, pp. 57-101.

26. Derby, C.D. and J. Atema. 1980. Induced host odor attraction in the pea crab Pinnotheres maculatus. Biol. Bull. 158:26-33.

27. Atema, J., K. Holland and W. Ikehara. 1980. Olfactory responses of yellowfin tuna (Thunnus albacares) to prey odors: Chemical search image. J. Chem. Ecol. 6:457-465.

28. Atema, J. and J. S. Cobb. 1980. Social behavior. In: The Biology and Management of Lobsters. Vol. I, J.S. Cobb and B.F. Phillips, eds. Academic Press, New York, pp. 409-450.

29. Atema, J. 1980. Smelling and tasting underwater. Oceanus 23,3:4-18.

8 30. Olla, B.L., J. Atema, R. Forward, J. Kittredge, R. J. Livingston, D. W. McLeese, D. C. Miller, W. B. Vernberg, P. G. Wells, and K. Wilson. 1980. The role of behavior in marine pollution monitoring. Rapp. P.-v. Reun. Cons. int. Explor. Mer 179:174-181.

31. Derby, C. D. and J. Atema. 1981. Ecological interactions. In: Yearbook of Science and Technology, S.P. Parker, ed. McGraw-Hill Book Co., New York, pp. 160-161.

32. Atema, J. and C. Derby. 1981. Ethological evidence for search images in predatory behavior. In: Adv. Physiol. Sci., Vol. 16, Sensory Functions, E. Grastyan and P. Molnar, eds. Pergamon Press Ltd., Oxford, pp. 395-400.

33. Derby, C. D. and J. Atema. 1981. Influence of drilling muds on the primary chemosensory neurons in walking legs of the lobster Homarus americanus. Can. J. Fish. Aquat. Sci. 38:268-274.

34. Derby, C.D. and J. Atema. 1981. Selective improvement in responses to prey odors by the lobster Homarus americanus, following feeding experience. J. Chem. Ecol. 7:1073-1080.

35. Atema, J., D. F. Leavitt, D. E. Barshaw, and M. C. Cuomo. 1982. Effects of drilling muds on behavior of the American lobster, Homarus americanus, in water column and substrate exposures. Can. J. Fish. Aquat. Sci. 39:675-690.

36. Botero, L. and J. Atema. 1982. Behavior and substrate selection during larval settling in the lobster Homarus americanus. J. Crust. Biol. 2:59-69.

37. Derby, C. D. and J. Atema. 1982. Chemosensitivity of walking legs of the lobster, Homarus americanus: response spectrum and thresholds. J. Exp. Biol. 98:303-315.

38. Derby, C. D. and J. Atema. 1982. Function of chemo- and mechanoreceptors in lobster (Homarus americanus) feeding behaviour. J. Exp. Biol. 98:317-327.

39. Derby, C. D. and J. Atema. 1982. Narrow-spectrum chemoreceptor cells in the walking legs of the lobster Homarus americanus: taste specialists. J. Comp. Physiol. 146:181-189.

40. Devine, D. V. and J. Atema. 1982. Function of chemoreceptor organs in spatial orientation of the lobster, Homarus americanus: differences and overlap. Biol. Bull. 163:144-153.

41. Johnson, B. R. and J. Atema. 1983. Narrow-spectrum chemoreceptor cells in the antennules of the American lobster, Homarus americanus. Neuroscience Letters 41:145-150.

42. Derby, C. D., P. M. Reilly, and J. Atema. 1984. Chemosensitivity of the lobster Homarus americanus to secondary plant compounds: unused receptor capabilities. J. Chem. Ecol. 10:879-892.

43. Johnson, B. R., R. Voigt, P.F. Borroni, and J. Atema (1984) Response properties of lobster chemoreceptors: Tuning of primary taste neurons in walking legs. J. Comp. Physiol. A. 155:593-604.

44. Johnson, B. R., P. F. Borroni and J. Atema. 1985. Mixture effects in primary olfactory and gustatory receptor cells from the lobster. Chem. Senses 10:367-373.

45. Atema, J. 1985. Chemoreception in the sea: adaptations of chemoreceptors and behavior to aquatic stimulus conditions. Soc. Exp. Biol. Symp. 39:387-423.

46. Borroni, P. F., L. S. Handrich and J. Atema. 1986. The role of narrowly tuned taste cell populations in lobster (Homarus americanus) feeding behavior. Behav. Neurosci. 100:206-212.

47. Atema, J. and D. F. Cowan. 1986. Sex identifying urine and molt signals in the lobster Homarus americanus. J. Chem. Ecol. 12:2065-2080.

48. Johnson, B. R. and J. Atema. 1986. Chemical stimulants for a component of feeding behavior in the common Gulf weed shrimp, Leander tenuicornis (Say). Biol. Bull. 170:1-10.

9 49. Atema, J. 1986. Review of sexual selection and chemical communication in the lobster, Homarus americanus. Can. J. Fish. Aquat. Sci. 43:2283-2290.

50. Tierney, A. J. and J. Atema. 1986. Effects of acidification on the behavioral response of crayfishes (Orconectes virilis and Procambarus acutus) to chemical stimuli. Aquat. Toxicol. 9:1-11.

51. Bryant, B. P. and J. Atema. 1987. Diet manipulation affects social behavior of catfish: importance of body odor. J. Chem. Ecol. 13:1645-1661.

52. Borroni, P. F. and J. Atema. 1987. Self- and cross-adaptation of single chemoreceptor cells in the taste organs of the lobster, Homarus americanus. Olfaction and Taste IX, S. Roper and J. Atema, eds. N.Y. Acad. Sci. 510:184- 186.

53. Voigt, R. and J. Atema. 1987. Signal-to-noise ratios and cumulative self-adaptation of chemoreceptor cells. Olfaction and Taste IX, S. Roper and J. Atema, eds. N.Y. Acad. Sci. 510:692-694.

54. Johnson, B. R., C. L. Merrill, R. C. Ogle and J. Atema. 1987. Tuning of olfactory neurons sensitive to hydroxy-L- proline in the American lobster. Olfaction and Taste IX , S. Roper and J. Atema, eds. N.Y. Acad. Sci. 510:388- 390.

55. Handrich, L. S. and J. Atema. 1987. Effects of chemical noise on the detection of chemical stimuli. Olfaction and Taste IX, S. Roper and J. Atema, eds. N.Y. Acad. Sci. 510:342-344.

56. Tierney, A. J. and J. Atema. 1987. Effects of short-term exposure to lowered pH on the behavioral response of crayfish (Procambarus acutus and Orconectes virilis) to chemical stimuli. Olfaction and Taste IX, S. Roper and J. Atema, eds. N.Y. Acad. Sci. 510:655-657.

57. Atema, J. 1987. Aquatic and terrestrial chemoreceptor organs: morphological and physiologial designs for interfacing with chemical stimuli. In: P. Dejours, L. Bolis, C.R. Taylor, E.R. Weibel, eds., Terrestrial Versus Aquatic Life: Contrasts in Design and Function. Fidia Res. Ser., Liviana Press, Padova: pp. 303-316.

58. Derby, C. D. and J. Atema. 1988. Chemoreceptor cells in aquatic invertebrates: peripheral mechanisms of chemical signal processing in decapod crustacea. In: J. Atema, A.N. Popper, R.R. Fay and W.N. Tavolga, eds., Sensory Biology of Aquatic Animals. Springer-Verlag, NY, pp. 365-385.

59. Atema, J. 1988. Distribution of chemical stimuli. In: J. Atema, A.N. Popper, R.R. Fay and W.N. Tavolga, eds., Sensory Biology of Aquatic Animals. Springer-Verlag, NY, pp. 29-56.

60. Tierney, A. J. and J. Atema. 1988. Behavioral responses of crayfish (Orconectes virilis and Orconectes rusticus) to chemical feeding stimulants. J. Chem. Ecol. 14:123-133.

61. Tierney, A. J. and J. Atema. 1988. Amino acid chemoreception: Effects of pH on receptors and stimuli. J. Chem. Ecol. 14:135-141.

62. Johnson, B. R., C. L. Merrill, R. C. Ogle and J. Atema. 1988. Response properties of lobster chemoreceptors: tuning of olfactory neurons sensitive to hydroxy-proline. J. Comp. Physiol. A 162: 201-211.

63. Moore, P. and J. Atema. 1988. A model of a temporal filter in chemoreception to extract directional information from a turbulent odor plume. Biol. Bull. 174:355-363.

64. Tierney, A. J., R. Voigt and J. Atema. 1988. Response properties of chemoreceptors from the medial antennule of the lobster Homarus americanus. Biol. Bull. 174:364-372.

65. Borroni, P. and J. Atema. 1988. Adaptation in chemoreceptor cells: I. Self-adapting backgrounds determine threshold and cause parallel shift of response function. J. Comp. Physiol. A 164:67-74.

66. Borroni, P. and J. Atema. 1989. Adaptation in chemoreceptor cells: II. the effects of cross-adapting backgrounds depend on spectral tuning. J. Comp. Physiol. A. 165:669-677.

10 67. Atema, J., P. Borroni, B. R. Johnson, R. Voigt and L. S. Handrich. 1989. Adaptation and mixture interactions in chemoreceptor cells: mechanisms for diversity and contrast enhancement. In: D.L. Laing, W. Cain, R. McBride, B.W. Ache, eds., Perception of Complex Smells and Tastes. Acad. Press, Sydney, NSW. pp. 83-100.

68. Johnson, B. R., R. Voigt and J. Atema. 1989. Response properties of lobster chemoreceptor cells: response modulation by stimulus mixtures. Physiol. Zool. 62:559-579.

69. Karnofsky, E. B., J. Atema and R. H. Elgin. 1989. Field observations of social behavior, shelter use and foraging in the lobster, Homarus americanus. Biol. Bull. 176:239-246

70. Karnofsky, E. B., J. Atema and R.H. Elgin. 1989. Natural dynamics of population structure and habitat use of the lobster, Homarus americanus, in a shallow cove. Biol. Bull. 176:247-256

71. Moore, P. A., G. A. Gerhardt and J. Atema. 1989. High resolution spatio-temporal analysis of aquatic chemical signals using microelectrochemical electrodes. Chemical Senses 14:829-840.

72. Voigt, R. and J. Atema. 1990. Adaptation in chemoreceptor cells: III. Effects of cumulative adaptation. J. Comp. Physiol. A. 166:865-874.

73. Cowan, D. F. and J. Atema. 1990. Moult staggering and serial monogamy in American lobsters, Homarus americanus. Anim. Behav. 39:1199-1206.

74 Cowan, D. F., J. Atema and A. R. Solow. 1991. Moult staggering in the American lobster: a statistical analysis. Anim. Behav. 42:863-864.

75. Johnson, B. R., R. Voigt, C. L. Merrill, and J. Atema. 1991. Across-fiber patterns may contain a sensory code for stimulus intensity. Brain Res. Bull. 26(3):327-331.

76. Moore, P. A., N. Scholz and J. Atema. 1991. Chemical orientation of lobsters, Homarus americanus, in turbulent odor plumes. J. Chem. Ecol. 17:1293-1307.

77. Atema, J., P. A. Moore, L. P. Madin and G. A. Gerhardt. 1991. Subnose-1: electrochemical tracking of odor plumes at 900 m beneath the ocean surface. Mar. Ecol. Prog. Ser. 74:303-306.

78. Karavanich, C. and J. Atema. 1991. Role of olfaction in recognition of dominance in the American lobster, Homarus americanus. Biol. Bull. 181:359-360.

79. Moore, P. A. and J. Atema. 1991. Spatial information contained in three-dimensional fine structure of an aquatic odor plume. Biol. Bull. 181:408-418.

80. Moore, P. A., J. Atema and G. A. Gerhardt. 1991. Fluid dynamics and microscale odor movement in the chemosensory appendages of the lobster, Homarus americanus. Chem. Senses 16:663-674.

81. Moore, P. A., J. Atema and G. A. Gerhardt. 1991. The structure of environmental, odor signals: from turbulent dispersion to movement through boundary layers and mucous. In: Chemical Signals in Vertebrates VI (R.L. Doty and D. Muller-Schwartze, eds.).

82. Voigt, R. and J. Atema. 1992. Tuning of chemoreceptor cells of the second antenna of the American lobster (Homarus americanus) with a comparison of four of its other chemoreceptor organs. J. Comp. Physiol. A 171: 673-683.

83. Berg, K., R. Voigt and J. Atema. 1992. Flicking in the lobster Homarus americanus: Recordings from electrodes implanted in antennular segments. Biol. Bull. 183:377-378.

84. Gomez, G., R. Voigt and J. Atema. 1992. High resolution measurement and control of chemical stimuli in the lateral antennule of the lobster Homarus americanus. Biol. Bull. 183:353-354.

85. Corotto, F., R. Voigt and J. Atema. 1993. Spectral tuning of chemoreceptor cells on the third maxilliped of the lobster, Homarus americanus. Biol. Bull. 183:456-462. 11

86. Kotrschal, K., R. Peters and J. Atema. 1993. Sampling and behavioral evidence for mucus detection in a unique chemosensory organ: the anterior dorsal fin in rocklings (Ciliata mustela: Gadidae: Teleostei). Zool Jb. Physiol. 97:47-67.

87. Bayha, K. M., R. Voigt and J. Atema. 1993. A comparison of the tuning properties of chemoreceptor cells in the first and fourth walking legs of female American lobsters. Biol. Bull. 185:316-317.

88. Breithaupt, T. and J. Atema. 1993. Evidence for the use of urine signals in agonistic interactions of the American lobster. Biol. Bull. 185:318-319.

89. Bushmann, P. and J. Atema. 1993. A novel tegumental gland in the nephropore of the lobster, Homarus americanus: a site for the production of chemical signals? Biol. Bull. 185:319-320.

90. Kaplan, L. J., C. Lowrance, J. Basil and J. Atema. 1993. The role of chemical and visual cues in agonistic interactions of the American lobster. Biol. Bull. 185:320-321.

91. Karavanich, C. and J. Atema. 1993. Agonistic encounters in the American lobster, Homarus americanus: Do they remember their opponents?. Biol. Bull. 185:321-322.

92. Merrill, C. M., R. Voigt and J. Atema. 1994. Reliability of chemoreceptor cell response. Intensity coding by pattern and response magnitude with a comparision of analytical methods. J. Comp. Physiol. A 175:95-105.

93. Gomez, G., R. Voigt and J. Atema 1994. Frequency filter properties of lobster chemoreceptor cells determined with high-resolution stimulus measurement. J. Comp. Physiol. A 174:803-811.

94. Consi, T. R., J. Atema, C. A. Goudey, J. Cho and C. Chryssostomidis. 1994. AUV guidance with chemical signals, Proc. IEEE Symp. on Autonomous Underwater Vehicle Technology, Cambridge, MA, 19-20 July 1994, pp. 450- 455.

95. Gomez, G., R. Voigt and J. Atema. 1994. Tuning properties of chemoreceptor cells of the American lobster: Temporal filters. In: K. Kurihara, N. Suzuki and H. Ogawa (eds.) Olfaction and Taste XI, Springer Verlag, Tokyo, pp. 788-789.

96. Voigt, R. and J. Atema. 1994. Comparison of tuning properties of five chemoreceptor organs of the American lobster. In: K. Kurihara, N. Suzuki and H. Ogawa (eds.) Olfaction and Taste XI, Springer Verlag, Tokyo, pp.787.

97. Atema, J. 1994. Turbulent odor dispersal, receptor cell filters, and chemotactic behavior. In: K. Kurihara, N. Suzuki and H. Ogawa (eds.) Olfaction and Taste XI, Springer Verlag, Tokyo, pp. 778-782.

98. Gomez, G. and J. Atema. 1994. Time course of recovery from adaptation by hydroxyproline-sensitive lobster olfactory receptor neurons. Biol. Bull. 187:259-260.

99. Basil, J. and J. Atema. 1994. Lobster orientation in turbulent odor plumes: simultaneous measurement of tracking behavior and temporal odor patterns. Biol. Bull. 187:272-273.

100. Leonard, Ann E., R. Voigt and J. Atema. 1994. Lobster orientation in turbulent odor plumes: electrical recording of bilateral olfactory sampling (antennular "flicking"). Biol. Bull. 187:273.

101. Bushman,P. and J. Atema. 1994. Aggression reducing courtship signals in the lobster, Homarus americanus. Biol. Bull. 187:275-276.

102. Atema, J. 1995. Chemical signals in the marine environment: dispersal, detection, and temporal signal analysis. PNAS 92:62-66.

103. Atema, J. and R. Voigt. 1995. Behavior and Sensory Biology. Chapter 13. In: J. Factor, ed. The Biology of the Lobster, Homarus americanus, Acad. Press, N.Y.: pp. 313-348.

12 104. Consi, T. R., F. Grasso, D. Mountain and J. Atema. 1995. Explorations of turbulent odor plumes with an autonomous underwater robot. Biol. Bull. 189:231-232.

105. Dittmer, K., F. Grasso and J. Atema. 1995. Effects of varying plume turbulence on temporal concentration signals available to orienting lobsters. Biol. Bull 189:232-233.

106. Gomez, G. and J. Atema. 1996. Temporal resolution in olfaction: Stimulus integration time of lobster chemoreceptor cells. J. Exp. Biol. 199:1771-1779.

107. Gomez, G. and J. Atema. 1996. Temporal resolution in olfaction II: Time course of recovery from adaptation in lobster chemoreceptor cells. J. Neurophys. 76: 1340-1343.

108. Bushmann, P. J. and J. Atema. 1996. The nephropore rosette glands of the lobster, Homarus americanus: Possible sources of urine pheromones. J. Crust. Biol. 16:221-231.

109. Atema, J. 1996. Eddy Chemotaxis and Odor Landscapes: Exploration of Nature with Animal Sensors. Biol. Bull. 191:129-138.

110. Grasso, F., T. Consi, D. Mountain and J. Atema. 1996. Locating Odor Sources in Turbulence with a Lobster Inspired Robot. In: Maes et al., Eds. From Animals to Animats 4: Proceedings of the 4th International Conference on Simulation of Adaptive Behavior. MIT Press, Cambridge MA: 104-112.

111. Voigt, R., H. Wennemer and J. Atema. 1996. Spectral Tuning Properties of Chemoreceptor Cells in the Front Walking Legs of the Common Spider Crab Libinia emarginata. Mar. Fresh. Behav. Physiol. 27:261-267.

112. Guenther, C., H. Miller, J. Basil and J. Atema. 1996. Orientation Behavior of the Lobster: Responses to Directional Chemical and Hydrodynamic Stimulation of the Antennules. Bio. Bull. 191:310-311.

113. Grasso, F. W., J. H. Dale, T. R. Consi, D. C. Mountain and J. Atema. 1996. Behavior of Purely Chemotactic Robot Lobster Reveals Different Odor Dispersal Patterns in the Jet Region and the Patch Field of a Turbulent Plume. Bio. Bull. 191:312-313.

114. Dittmer, K., F. W. Grasso and J. Atema. 1996. Obstacles to Flow Produce Distinctive Patterns of Odor Dispersal on a Scale That Could Be Detected by Marine Animals. Bio. Bull. 191:313-314.

115. Oliver, S. J., F. W. Grasso and J. Atema. 1996. Filament Tracking and Casting in American Elvers Anguilla rostrata. Bio. Bull. 191:314-315.

116. Atema, J. and R. Voigt. 1996. Orientation of Marine Invertebrates to Odor Sources In: Glase J.C., ed. Tested studies for Laboratory Teaching. Proc. 18th Workshop/Conference of the Association for Biology Laboratory Education. pp. 211-230

117. Bushmann, P. J. and J. Atema. 1997. Shelter sharing and chemical courtship signals in the lobster, Homarus americanus. Can. J. Fish. Aquat. Sci. 54: 647-654.

118. Voigt, R., A. M. Weinstein and J. Atema. 1997. Spectral tuning of chemoreceptor cells in the lateral antennules of the American lobster, Homarus americanus. Mar. Fresh. Behav. Physiol. 30: 19-27.

119. Beglane, P., F. Grasso, J. Basil and J. Atema. 1997. Far Field Chemo-orientation in the American Lobster, Homarus Americanus: Effects of Unilateral Ablation and Lesioning of the Lateral Antennule. Biol. Bull. 193: 214- 215.

120. Grasso, F. W., T. R. Consi, D. C. Mountain, J. H. Dale and J. Atema. 1997. Effectiveness of continuous bilateral sampling for robot chemotaxis in a turbulent odor plume: implications for lobster chemotaxis. Biol. Bull. 193: 215- 216.

121. Trott, T. J., R. Voigt and J. Atema. 1997. Chemoreception by the red-jointed fiddler crab, Uca minax (LeConte): Spectral tuning properties of the walking legs. Mar. Fresh. Behav. Physiol. 30: 239-249.

13 122. Karavanich, C. and J. Atema. 1998. Olfactory recognition of urine signals in dominance fights between male lobster, Homarus americanus. Behaviour. 135: 719-730.

123. Karavanich, C. and J. Atema. 1998. Individual recognition and memory in lobster (Homarus americanus) dominance. Anim. Behaviour 56: 1553-1560.

124. Grasso, F.W., J.A. Basil and J. Atema. 1998. Toward the Convergence: Robot and Lobster Perspectives of Tracking Odors to their Source in the Turbulent Marine Environment. Proc. IEEE (ISIC/CIRA/ISAS Joint Conference, Gaithersburg, MD) pp: 259-264.

125. Atema, J. 1998. Tracking turbulence: Processing the bimodal signals that define an odor plume. Biol. Bull. 195:179-180.

126. Weaver, M. and J. Atema. 1998. Hydrodynamic coupling of lobster antennule motion to oscillatory water flow. Biol. Bull. 195:180-182.

127. Guenther, C. M. and J. Atema. 1998. Distribution of setae on the Homarus americanus lateral antennular flagellum. Biol. Bull. 195:182-183.

128. Quinn, E., K. Paradise and J. Atema. 1998. Juvenile Limulus polyphemus generate two water currents that contact one proven and one putative chemoreceptor organ. Biol. Bull. 195:185-187.

129. Breithaupt, T., D. P. Lindstrom and J. Atema. 1999. Urine release in freely moving catherized lobsters (Homarus americanus) with references to feeding and social activities. J. Exp. Biol. 202:837-844.

130. Atema, J. 1999. Marine chemical signals: dispersal, eddy chemotaxis, urine pheromones, and the development of a chemotactic robot. In: Tastes & Aromas. The Chemical senses in Science and Industry. G. A. Bell and A. J. Watson, eds. UNSW Press, Sydney (220 pp.), 172-179.

131. Gomez. G., R.Voigt and J.Atema. 1999. Temporal resolution in olfaction III: Flicker fusion and concentration- dependent synchronization with stimulus pulse trains of antennular chemoreceptor cells in the American lobster. J. Comp. Physiol. A.185: 427-436.

132. Berkey, C. and J.Atema. 1999. Individual recognition and memory in Homarus americanus male-female interactions. Biol. Bull. 197: 253-254.

133. McLaughlin, L., J.Walters, J.Atema and N.Wainwright. 1999. Urinary protein concentration in connection with agonistic interactions in Homarus americanus. Biol. Bull. 197: 254-255.

134. Mijos, K., F.Grasso and J.Atema. 1999. Antennule use by the American lobster, Homarus americanus, during chemo-orientation in three turbulent odor plumes. Biol. Bull. 197: 249-250.

135. Hanna, J.P., F.Grasso and J.Atema. 1999. Temporal correlation between sensor pairs in different plume positions: a study of concentration information available to the American lobster, Homarus americanus, during chemotaxis. Biol. Bull. 197: 250-251.

136. Zettler, E. and J.Atema. 1999. Chemoreceptor cells as concentration slope detectors: preliminary evidence from the lobster nose. Biol. Bull. 197: 252-253.

137. Grasso, F., T.Consi, D.Mountain and J.Atema (1999). Biomimetic robot lobster performs chemo-orientation in turbulence using a pair of spatially separated sensors: progress and challenges. Robotics and Autonomous Systems 807: 1-17.

138. Bushmann, P. and J.Atema. 2000. Chemically-mediated mate location and evaluation in the lobster, Homarus americanus. J. Chem. Ecol. 26: 883-899.

139. Basil, J.A., R.T.Hanlon, S.I.Sheikh and J.Atema, 2000. Three-dimensional odor tracking by Nautilus pompilius. J. Exp. Biol. 203: 1409-1414.

140. Breithaupt, T. and J.Atema, 2000. The timing of chemical signalling with urine in dominance fights of male lobsters (Homarus americanus). Behav Ecol Sociobiol 49: 67-78. 14

141. Kozlowski, C., K.Yopak, R.Voigt and J.Atema. 2001. An initial study on the effects of signal intermittency on the odor plume tracking behavior of the American Lobster, Homarus americanus. Biol. Bull. 201: 274-276.

142. Gray, P.M., B.Krause, J.Atema, R.Payne, C.Krumhansl and L.Baptista (2001) BioMusic: The Music of Nature and the Nature of Music. Science 291: 52-54.

143. Atema, J., M.K.Kingsford, and G. Gerlach, 2002. Larval reef fish could use odour for detection, retention and orientation to reefs. Marine Ecology Progres Series 204: 151-160.

144. Grasso, F.W. and J.Atema. 2002. Integration of flow and chemical sensing for guidance of autonomous marine robots in turbulent flows. Environmental Fluid Mechanics 2: 95-114.

145. Rohrkasse, S.M. and J.Atema. 2002. Tracking behavior of Busiconinae whelks. Biol. Bull. 203: 235-236.

146. Mann, K., E. Turnell, J. Atema, and G. Gerlach (2003) Kin recognition in juvenile zebrafish (Danio rerio) based on olfactory cues. Biol. Bull. 205: 224-225.

147. Savage, A. and J. Atema (2003) Neurochemical Modulation of Behavioral Response to Chemical Stimuli in Homarus americanus. Biol. Bull. 205: 222-223.

148. Pohlmann, K., J. Atema, and T. Breithaupt.(2004) The importance of the lateral line in nocturnal predation of piscivorous catfish. J. Exp. Biol.207:2971-2978

149. Miller-Sims, V., J. Atema, M.J. Kingsford and G. Gerlach (2004) Characterization and isolation of DNA microsatellite primers in the cardinalfish (Apogon doederleini) Molecular Ecology Notes 4: 336-338.

150. Atema, J. (2004) Old bone flutes. “Pan” Journal of the British Flute Society, 23 (4):18-23.

151. Tricarico, E., J. Atema and F. Gherardi (2004) Efficiency of aggregations for shell recruitment by hermit crabs. Redia 87: 235-237.

151. Gherardi, F and J. Atema (2005) Memory of social partners in hermit crab dominance. Ethology 111: 271-285.

152. Miller-Sims, V., M. Delaney, J. Atema, M.J. Kingsford and G. Gerlach (2005). DNA microsatellites in the neon damselfish (Pomacentrus coelestis). Molecular Ecology Notes 5: 424-426.

153. Gherardi, F and J. Atema (2005) Effects of chemical context on shell investigation behavior in hermit crabs. Journal of Experimental Marine Biology and Ecology 320: 1-7.

154. M. Johnson and J. Atema (2005). The olfactory pathway for individual recognition in the American Lobster, Homarus americanus. J. Exp. Biol. 208: 2865-2872.

155. Miller-Sims, V., M. Delaney, J. Atema, M.J. Kingsford and G. Gerlach (2005). DNA microsatellites in Acanthochromis polyacanthus. Molecular Ecology Notes 5: 841-843.

156. Gherardi, F., E. Tricarico and J. Atema (2005) Unraveling the nature of individual recognition by odor in hermit crabs. J. Chem Ecol. 31: 2877-2896.

157. Hodgins-Davis, A, S. Roberts, D.F. Cowan, J. Atema, M. Bennie, C. Avolio, J. DeFaveri, and G. Gerlach (2007) Characterization of SSRs from the American lobster, Homarus americanus. Molecular Ecology Notes 7:330-332.

158. Atema, J. and M.A. Steinbach (2007) Chemical communication and social behavior of the lobster, Homarus americanus, and other Decapod Crustacea. Pp. 115-144. In: Duffy, J. E. and Thiel,,M.(eds) “Evolutionary Ecology of social and Sexual Systems: Crustaceans as Model Organisms”. Oxford University Press, New York NY, USA.

159. Gerlach G, J. Atema, MJ. Kingsford, KP. Black, V Miller-Sims (2007) Smelling home can prevent dispersal of reef fish larvae. PNAS 104: 858-863.

160. Gardiner J. M. and J. Atema (2007) Sharks need the lateral line to locate odor sources: rheotaxis and eddy chemotaxis. J. Exp. Biol. 210:1925-1934. 15

161. Miller-Sims V, Gerlach G, Kingsford MJ and Atema J (2008) Dispersal in the spiny damselfish, Acanthochromis polyacanthus, a coral reef fish species without a larval pelagic stage. Molecular Ecology 17: 5036-5048.

162. Gardiner J and Atema J (2010) The Function of Bilateral Odor Arrival Time Differences in Olfactory Orientation of Sharks. Current Biology 20:1187-1191. 163. Miller-Sims VC, Atema J, Gerlach G and Kingsford MJ (2011) Coral reef fish larvae sustain an olfactory preference for their chosen settlement reef. How stable are the reef odor preferences of settling reef fish larvae? Marine and Freshwater Behavior and Physiology 44:133-141. 164. Orlosk, JL, Walker, JM, Morrison AL, Atema, J. (2011) Conditioning Carcinus maenas against instinctive light avoidance. Marine and Freshwater Behavior and Physiology 44: 375-381.

165. Atema J (2012) Aquatic odor dispersal fields: opportunities and limits of detection, communication and navigation. Chapter 1, in: Bronmark C and Hansson L-A (eds.) Chemical Ecology in Aquatic Systems. Oxford University Press: pp.1-18.

166. Gerlach G and Atema J (2012) The use of chemical cues in habitat recognition and settlement. Chapter 5 in: Bronmark C and Hansson L-A (eds.) Chemical Ecology in Aquatic Systems. Oxford University Press: pp. 72-81.

167. Rycroft N, K Radcliffe, E McDougal, J Halverson, G Gerlach, J Deppermann and J Atema (2012). No Olfactory Recognition of Shell Disease in American Lobsters, Homarus americanus. Journal of Shellfish Research 31:527-532.

168. Mouritsen, H., Atema, J., Kingsford, M. & Gerlach, G. (2013) Sun Compass Orientation Helps Coral Reef Fish Larvae Return to their Natal Reef. PLOS-ONE 8(6): e66039. doi:10.1371/journal.pone.0066039.

169. Paris C Atema J Irisson J-O Kingsford MK Gerlach G Guigand C (2013). Reef Odor: A wake up call for navigation in reef fish larvae. PLOS-ONE (August 28, 2013).

In Press

Gardiner JM Atema J (2013) Flow Sensing in Sharks: Lateral Line Contributions to Navigation and Prey Capture. In: Flow Sensing in Air and Water: Behavioural, Neural, and Engineering Principles of Operation (eds H. Bleckmann, J. Mogdans, & S.L. Coombs) (Springer-Verlag, In Press).

Rycroft N. Radcliffe K. Atema J. (2013) A photographic method for lobster morphometry aimed at site discrimination. Canadian Journal of Fisheries and Aquatic Sciences, Special Issue (in press).

Kingsford MK, Finn MD, O’Callaghan MD, Atema J, Gerlach G (2013) Planktonic Larval Duration, Age and Growth of doederleini (Pisces: ) on the Southern Great Barrier Reef, Australia (Marine Biology, in press)

Books (Edited)

Roper, S. and J. Atema, eds. (1987) Olfaction and Taste IX, N.Y. Acad. Sci. 510 (747 pp).

Atema, J., R.R. Fay, A.N. Popper and W.N. Tavolga, eds. (1988) Sensory Biology of Aquatic Animals. Springer- Verlag, NY. 923 pp.

Updated October 2013

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