The Mycophile 58:3 May/June 2018
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Appendix K. Survey and Manage Species Persistence Evaluation
Appendix K. Survey and Manage Species Persistence Evaluation Establishment of the 95-foot wide construction corridor and TEWAs would likely remove individuals of H. caeruleus and modify microclimate conditions around individuals that are not removed. The removal of forests and host trees and disturbance to soil could negatively affect H. caeruleus in adjacent areas by removing its habitat, disturbing the roots of host trees, and affecting its mycorrhizal association with the trees, potentially affecting site persistence. Restored portions of the corridor and TEWAs would be dominated by early seral vegetation for approximately 30 years, which would result in long-term changes to habitat conditions. A 30-foot wide portion of the corridor would be maintained in low-growing vegetation for pipeline maintenance and would not provide habitat for the species during the life of the project. Hygrophorus caeruleus is not likely to persist at one of the sites in the project area because of the extent of impacts and the proximity of the recorded observation to the corridor. Hygrophorus caeruleus is likely to persist at the remaining three sites in the project area (MP 168.8 and MP 172.4 (north), and MP 172.5-172.7) because the majority of observations within the sites are more than 90 feet from the corridor, where direct effects are not anticipated and indirect effects are unlikely. The site at MP 168.8 is in a forested area on an east-facing slope, and a paved road occurs through the southeast part of the site. Four out of five observations are more than 90 feet southwest of the corridor and are not likely to be directly or indirectly affected by the PCGP Project based on the distance from the corridor, extent of forests surrounding the observations, and proximity to an existing open corridor (the road), indicating the species is likely resilient to edge- related effects at the site. -
Major Clades of Agaricales: a Multilocus Phylogenetic Overview
Mycologia, 98(6), 2006, pp. 982–995. # 2006 by The Mycological Society of America, Lawrence, KS 66044-8897 Major clades of Agaricales: a multilocus phylogenetic overview P. Brandon Matheny1 Duur K. Aanen Judd M. Curtis Laboratory of Genetics, Arboretumlaan 4, 6703 BD, Biology Department, Clark University, 950 Main Street, Wageningen, The Netherlands Worcester, Massachusetts, 01610 Matthew DeNitis Vale´rie Hofstetter 127 Harrington Way, Worcester, Massachusetts 01604 Department of Biology, Box 90338, Duke University, Durham, North Carolina 27708 Graciela M. Daniele Instituto Multidisciplinario de Biologı´a Vegetal, M. Catherine Aime CONICET-Universidad Nacional de Co´rdoba, Casilla USDA-ARS, Systematic Botany and Mycology de Correo 495, 5000 Co´rdoba, Argentina Laboratory, Room 304, Building 011A, 10300 Baltimore Avenue, Beltsville, Maryland 20705-2350 Dennis E. Desjardin Department of Biology, San Francisco State University, Jean-Marc Moncalvo San Francisco, California 94132 Centre for Biodiversity and Conservation Biology, Royal Ontario Museum and Department of Botany, University Bradley R. Kropp of Toronto, Toronto, Ontario, M5S 2C6 Canada Department of Biology, Utah State University, Logan, Utah 84322 Zai-Wei Ge Zhu-Liang Yang Lorelei L. Norvell Kunming Institute of Botany, Chinese Academy of Pacific Northwest Mycology Service, 6720 NW Skyline Sciences, Kunming 650204, P.R. China Boulevard, Portland, Oregon 97229-1309 Jason C. Slot Andrew Parker Biology Department, Clark University, 950 Main Street, 127 Raven Way, Metaline Falls, Washington 99153- Worcester, Massachusetts, 01609 9720 Joseph F. Ammirati Else C. Vellinga University of Washington, Biology Department, Box Department of Plant and Microbial Biology, 111 355325, Seattle, Washington 98195 Koshland Hall, University of California, Berkeley, California 94720-3102 Timothy J. -
Megacollybia (Agaricales)
Rep. Tottori Mycol. Inst. 45 : 1–57, 2007. Megacollybia (Agaricales) KAREN W. HUGHES1, RONALD H. PETERSEN1, JUAN LUIS MATA2, NADEZHDA V. PSURTSEVA3, ALEXANDER E. KOVALENKO3, OLGA V. MOROZOVA3, EDGAR B. LICKEY 4, JOAQUIN CIFUENTES BLANCO5, DAVID P. LEWIS6, EIJI NAGASAWA7, ROY E. HALLING8, SEIJI TAKEHASHI9, M. CATHERINE AIME10, TOLGOR BAU11, TERRY HENKEL12 Abstract The genus Megacollybia, originally proposed for M. (Collybia) platyphylla, has traditional- ly been treated as monotaxic. A phylogenetic reconstruction based on ITS rDNA sequences indicates that several species are involved, with strong phylogeographic signal. Although morphological characters are largely qualitative, examination of basidiomata suggests that specimens included in discrete clades can be distinguished at the species level. On these bases (phylogenetic, morphological), several new taxa are proposed: M. clitocyboidea, M. texensis, M. fusca, M. subfurfuracea, M. rodmani (with f. murina) and M. marginata. Tricholomopsis fallax is transferred to Megacollybia; M. platyphylla remains the type species of the genus but appears to be restricted to Europe, Scandinavia and western and central Russia. Key words: Taxonomy, systematics, biogeography, phylogeny, phylogeography 1 Ecology and Evolutionary Biology, University of Tennessee, Knoxville, TN 37996-1100 USA. 2 Department of Biology, University of South Alabama, Mobile, AL 36688 USA 3 Komarov Botanical Institute, 2 Prof. Popov Street, St Petersburg, 197376 Russia 4 Department of Biology, Bridgewater College, Bridgewater, -
MMA MASTERLIST - Sorted Alphabetically
MMA MASTERLIST - Sorted Alphabetically Sunday, December 10, 20Taxa Count: 2115 Page 1 of 26 Agaricus abruptibulbus Amanita amerimuscaria Agaricus arvensis Amanita amerirubescens nom. prov. Agaricus campestris Amanita atkinsoniana Agaricus haemorrhoidarius Amanita aureosolea nom. prov. Agaricus micromegethus Amanita battarrae Agaricus pattersonae Amanita bisporigera Agaricus placomyces Amanita brunnescens Agaricus semotus Amanita ceciliae Agaricus silvaticus Amanita cinereoconia Agaricus silvicola Amanita citrina Agaricus sp. Amanita citrina f. lavendula Agaricus subrutilescens Amanita cokeri Agaricus xanthrodermus Amanita cothurnata Agrocybe acericola Amanita crenulata Agrocybe aegerita Amanita crocea Agrocybe dura Amanita elongata Agrocybe erebia Amanita excelsa var. spissa Agrocybe firma Amanita farinosa Agrocybe pediades Amanita flavoconia Agrocybe praecox Amanita flavorubens Agrocybe sp. Amanita flavorubescens Agrocybe tabacina Amanita frostiana Albatrellus caeruleoporus Amanita fulva var. alba Albatrellus confluens Amanita fulva var. crassivolvata Albatrellus ovinus Amanita gemmata Albatrellus sp. Amanita jacksonii Alboleptonia sericella Amanita longipes Albugo candida Amanita murrilliana Aleuria aurantia Amanita onusta Aleuria rhenana Amanita pantherina, cf. Aleurodiscus amorphus Amanita phalloides Aleurodiscus oakesii Amanita porphyria Amanita abrupta Amanita praecox nom. prov. Amanita aestivalis Amanita pseudovolvata nom. prov. Amanita albocreata Amanita RET T01 Amanita amerifulva nom. prov. Amanita ristichii Amanita rubescens -
The Biosynthesis of Plant and Fungal Sesquiterpenoids in Ustilago Maydis and Discovery of a Bioactive Compound from Fistulina Hepatica
The biosynthesis of plant and fungal sesquiterpenoids in Ustilago maydis and discovery of a bioactive compound from Fistulina hepatica Inaugural-Dissertation Zur Erlangung des Doktorgrades der Mathematisch-Naturwissenschaftlichen Fakultät der Heinrich-Heine-Universität Düsseldorf vorgelegt von Jungho Lee aus Daegu Düsseldorf, September 2020 aus dem Institut für Mikrobiologie der Heinrich-Heine-Universität Düsseldorf Gedruckt mit der Genehmigung der Mathematisch-Naturwissenschaftlichen Fakultät der Heinrich-Heine-Universität Düsseldorf Referent: Prof. Dr. Michael Feldbrügge Korreferent : Prof. Dr. Julia Frunzke Tag der mündlichen Prüfung: 26. Oktober 2020 Eidesstattliche Erklärung Ich versichere an Eides Statt, dass die Dissertation von mir selbständig und ohne unzulässige fremde Hilfe unter Beachtung der „Grundsätze zur Sicherung guter wissenschaftlicher Praxis an der Heinrich-Heine-Universität Düsseldorf“ erstellt worden ist. Die Dissertation wurde in ihrer jetzigen oder einer ähnlichen Form noch bei keiner anderen Hochschule eingereicht. Ich habe zuvor keine erfolglosen Promotionsversuche unternommen. Ort, Datum Unterschrift Die Untersuchungen zur vorliegenden Arbeit wurden von Oktober 2016 bis September 2020 in Düsseldorf an der Heinrich-Heine-Universität in dem Institut für Mikrobiologie unter der Betreuung von Herrn Prof. Dr. Michael Feldbrügge durchgeführt. Teile dieser Arbeit wurden veröffentlicht in: Lee, J., Hilgers, F., Loeschke, A., Jaeger, K. E., Feldbrügge, M., 2020, Ustilago maydis serves as a novel production host for the synthesis of plant and fungal sesquiterpenoids. Frontiers in Microbiology 11, 1655. Lee, J., Shi, Y., Grün, P., Gube, M., Feldbrügge, M., Bode, H. B., Hennicke, F., 2020, Identification of feldin, an antifungal polyine from the beefsteak fungus Fistulina hepatica. Biomolecules 10, 1502. Summary Summary Sesquiterpenoids are important secondary metabolites with various pharma- and nutraceutical properties. -
New Species and New Records of Clavariaceae (Agaricales) from Brazil
Phytotaxa 253 (1): 001–026 ISSN 1179-3155 (print edition) http://www.mapress.com/j/pt/ PHYTOTAXA Copyright © 2016 Magnolia Press Article ISSN 1179-3163 (online edition) http://dx.doi.org/10.11646/phytotaxa.253.1.1 New species and new records of Clavariaceae (Agaricales) from Brazil ARIADNE N. M. FURTADO1*, PABLO P. DANIËLS2 & MARIA ALICE NEVES1 1Laboratório de Micologia−MICOLAB, PPG-FAP, Departamento de Botânica, Universidade Federal de Santa Catarina, Florianópolis, Brazil. 2Department of Botany, Ecology and Plant Physiology, Ed. Celestino Mutis, 3a pta. Campus Rabanales, University of Córdoba. 14071 Córdoba, Spain. *Corresponding author: Email: [email protected] Phone: +55 83 996110326 ABSTRACT Fourteen species in three genera of Clavariaceae from the Atlantic Forest of Brazil are described (six Clavaria, seven Cla- vulinopsis and one Ramariopsis). Clavaria diverticulata, Clavulinopsis dimorphica and Clavulinopsis imperata are new species, and Clavaria gibbsiae, Clavaria fumosa and Clavulinopsis helvola are reported for the first time for the country. Illustrations of the basidiomata and the microstructures are provided for all taxa, as well as SEM images of ornamented basidiospores which occur in Clavulinopsis helvola and Ramariopsis kunzei. A key to the Clavariaceae of Brazil is also included. Key words: clavarioid; morphology; taxonomy Introduction Clavariaceae Chevall. (Agaricales) comprises species with various types of basidiomata, including clavate, coralloid, resupinate, pendant-hydnoid and hygrophoroid forms (Hibbett & Thorn 2001, Birkebak et al. 2013). The family was first proposed to accommodate mostly saprophytic club and coral-like fungi that were previously placed in Clavaria Vaill. ex. L., including species that are now in other genera and families, such as Clavulina J.Schröt. -
CZECH MYCOLOGY Publication of the Czech Scientific Society for Mycology
CZECH MYCOLOGY Publication of the Czech Scientific Society for Mycology Volume 57 August 2005 Number 1-2 Central European genera of the Boletaceae and Suillaceae, with notes on their anatomical characters Jo s e f Š u t a r a Prosetická 239, 415 01 Tbplice, Czech Republic Šutara J. (2005): Central European genera of the Boletaceae and Suillaceae, with notes on their anatomical characters. - Czech Mycol. 57: 1-50. A taxonomic survey of Central European genera of the families Boletaceae and Suillaceae with tubular hymenophores, including the lamellate Phylloporus, is presented. Questions concerning the delimitation of the bolete genera are discussed. Descriptions and keys to the families and genera are based predominantly on anatomical characters of the carpophores. Attention is also paid to peripheral layers of stipe tissue, whose anatomical structure has not been sufficiently studied. The study of these layers, above all of the caulohymenium and the lateral stipe stratum, can provide information important for a better understanding of relationships between taxonomic groups in these families. The presence (or absence) of the caulohymenium with spore-bearing caulobasidia on the stipe surface is here considered as a significant ge neric character of boletes. A new combination, Pseudoboletus astraeicola (Imazeki) Šutara, is proposed. Key words: Boletaceae, Suillaceae, generic taxonomy, anatomical characters. Šutara J. (2005): Středoevropské rody čeledí Boletaceae a Suillaceae, s poznámka mi k jejich anatomickým znakům. - Czech Mycol. 57: 1-50. Je předložen taxonomický přehled středoevropských rodů čeledí Boletaceae a. SuiUaceae s rourko- vitým hymenoforem, včetně rodu Phylloporus s lupeny. Jsou diskutovány otázky týkající se vymezení hřibovitých rodů. Popisy a klíče k čeledím a rodům jsou založeny převážně na anatomických znacích plodnic. -
Clavaria Miniata) Flame Fungus
A LITTLE BOOK OF CORALS Pat and Ed Grey Reiner Richter Ramariopsis pulchella Revision 3 (2018) Ramaria flaccida De’ana Williams 2 Introduction This booklet illustrates some of the Coral Fungi found either on FNCV Fungi Forays or recorded for Victoria. Coral fungi are noted for their exquisite colouring – every shade of white, cream, grey, blue, purple, orange and red - found across the range of species. Each description page consists of a photo (usually taken by a group member) and brief notes to aid identification. The corals are listed alphabetically by genus and species and a common name has been included. In this revision five species have been added: Clavicorona taxophila, Clavulina tasmanica, Ramaria pyrispora, R. watlingii and R. samuelsii. A field description sheet is available as a separate PDF. Coral Fungi are so-called because the fruit-bodies resemble marine corals. Some have intricate branching, while others are bushier with ‘florets’ like a cauliflower or broccolini. They also include those species that have simple, club-shaped fruit-bodies. Unlike fungi such as Agarics that have gills and Boletes that have pores, the fertile surface bearing the spores of coral fungi is the external surface of the upper branches. All species of Artomyces, Clavaria, Clavulina, Clavulinopsis, Multiclavula, Ramariopsis and Tremellodendropsis have a white spore print while Ramaria species have a yellow to yellow-brown spore print, which is sometimes seen when the mature spores dust the branches. Most species grow on the ground except for two Peppery Corals Artomyces species and Ramaria ochracea that grow on fallen wood. Ramaria filicicola grows on woody litter and Tree-fern stems. -
Diversity of Ectomycorrhizal Fungi in Minnesota's Ancient and Younger Stands of Red Pine and Northern Hardwood-Conifer Forests
DIVERSITY OF ECTOMYCORRHIZAL FUNGI IN MINNESOTA'S ANCIENT AND YOUNGER STANDS OF RED PINE AND NORTHERN HARDWOOD-CONIFER FORESTS A THESIS SUBMITTED TO THE FACULTY OF THE GRADUATE SCHOOL OF THE UNIVERSITY OF MINNESOTA BY PATRICK ROBERT LEACOCK IN PARTIAL FULFILLMENT OF THE REQUIREMENTS FOR THE DEGREE OF DOCTOR OF PHILOSOPHY DAVID J. MCLAUGHLIN, ADVISER OCTOBER 1997 DIVERSITY OF ECTOMYCORRHIZAL FUNGI IN MINNESOTA'S ANCIENT AND YOUNGER STANDS OF RED PINE AND NORTHERN HARDWOOD-CONIFER FORESTS COPYRIGHT Patrick Robert Leacock 1997 Saint Paul, Minnesota ACKNOWLEDGEMENTS I am indebted to Dr. David J. McLaughlin for being an admirable adviser, teacher, and editor. I thank Dave for his guidance and insight on this research and for assistance with identifications. I am grateful for the friendship and support of many graduate students, especially Beth Frieders, Becky Knowles, and Bev Weddle, who assisted with research. I thank undergraduate student assistants Dustine Robin and Tom Shay and school teacher participants Dan Bale, Geri Nelson, and Judith Olson. I also thank the faculty and staff of the Department of Plant Biology, University of Minnesota, for their assistance and support. I extend my most sincere thanks and gratitude to Judy Kenney and Adele Mehta for their dedication in the field during four years of mushroom counting and tree measuring. I thank Anna Gerenday for her support and help with identifications. I thank Joe Ammirati, Tim Baroni, Greg Mueller, and Clark Ovrebo, for their kind aid with identifications. I am indebted to Rich Baker and Kurt Rusterholz of the Natural Heritage Program, Minnesota Department of Natural Resources, for providing the opportunity for this research. -
(Boletaceae, Basidiomycota) – a New Monotypic Sequestrate Genus and Species from Brazilian Atlantic Forest
A peer-reviewed open-access journal MycoKeys 62: 53–73 (2020) Longistriata flava a new sequestrate genus and species 53 doi: 10.3897/mycokeys.62.39699 RESEARCH ARTICLE MycoKeys http://mycokeys.pensoft.net Launched to accelerate biodiversity research Longistriata flava (Boletaceae, Basidiomycota) – a new monotypic sequestrate genus and species from Brazilian Atlantic Forest Marcelo A. Sulzbacher1, Takamichi Orihara2, Tine Grebenc3, Felipe Wartchow4, Matthew E. Smith5, María P. Martín6, Admir J. Giachini7, Iuri G. Baseia8 1 Departamento de Micologia, Programa de Pós-Graduação em Biologia de Fungos, Universidade Federal de Pernambuco, Av. Nelson Chaves s/n, CEP: 50760-420, Recife, PE, Brazil 2 Kanagawa Prefectural Museum of Natural History, 499 Iryuda, Odawara-shi, Kanagawa 250-0031, Japan 3 Slovenian Forestry Institute, Večna pot 2, SI-1000 Ljubljana, Slovenia 4 Departamento de Sistemática e Ecologia/CCEN, Universidade Federal da Paraíba, CEP: 58051-970, João Pessoa, PB, Brazil 5 Department of Plant Pathology, University of Flori- da, Gainesville, Florida 32611, USA 6 Departamento de Micologia, Real Jardín Botánico, RJB-CSIC, Plaza Murillo 2, Madrid 28014, Spain 7 Universidade Federal de Santa Catarina, Departamento de Microbiologia, Imunologia e Parasitologia, Centro de Ciências Biológicas, Campus Trindade – Setor F, CEP 88040-900, Flo- rianópolis, SC, Brazil 8 Departamento de Botânica e Zoologia, Universidade Federal do Rio Grande do Norte, Campus Universitário, CEP: 59072-970, Natal, RN, Brazil Corresponding author: Tine Grebenc ([email protected]) Academic editor: A.Vizzini | Received 4 September 2019 | Accepted 8 November 2019 | Published 3 February 2020 Citation: Sulzbacher MA, Orihara T, Grebenc T, Wartchow F, Smith ME, Martín MP, Giachini AJ, Baseia IG (2020) Longistriata flava (Boletaceae, Basidiomycota) – a new monotypic sequestrate genus and species from Brazilian Atlantic Forest. -
Phd. Thesis Sana Jabeen.Pdf
ECTOMYCORRHIZAL FUNGAL COMMUNITIES ASSOCIATED WITH HIMALAYAN CEDAR FROM PAKISTAN A dissertation submitted to the University of the Punjab in partial fulfillment of the requirements for the degree of DOCTOR OF PHILOSOPHY in BOTANY by SANA JABEEN DEPARTMENT OF BOTANY UNIVERSITY OF THE PUNJAB LAHORE, PAKISTAN JUNE 2016 TABLE OF CONTENTS CONTENTS PAGE NO. Summary i Dedication iii Acknowledgements iv CHAPTER 1 Introduction 1 CHAPTER 2 Literature review 5 Aims and objectives 11 CHAPTER 3 Materials and methods 12 3.1. Sampling site description 12 3.2. Sampling strategy 14 3.3. Sampling of sporocarps 14 3.4. Sampling and preservation of fruit bodies 14 3.5. Morphological studies of fruit bodies 14 3.6. Sampling of morphotypes 15 3.7. Soil sampling and analysis 15 3.8. Cleaning, morphotyping and storage of ectomycorrhizae 15 3.9. Morphological studies of ectomycorrhizae 16 3.10. Molecular studies 16 3.10.1. DNA extraction 16 3.10.2. Polymerase chain reaction (PCR) 17 3.10.3. Sequence assembly and data mining 18 3.10.4. Multiple alignments and phylogenetic analysis 18 3.11. Climatic data collection 19 3.12. Statistical analysis 19 CHAPTER 4 Results 22 4.1. Characterization of above ground ectomycorrhizal fungi 22 4.2. Identification of ectomycorrhizal host 184 4.3. Characterization of non ectomycorrhizal fruit bodies 186 4.4. Characterization of saprobic fungi found from fruit bodies 188 4.5. Characterization of below ground ectomycorrhizal fungi 189 4.6. Characterization of below ground non ectomycorrhizal fungi 193 4.7. Identification of host taxa from ectomycorrhizal morphotypes 195 4.8. -
AR TICLE New Sequestrate Fungi from Guyana: Jimtrappea Guyanensis
IMA FUNGUS · 6(2): 297–317 (2015) doi:10.5598/imafungus.2015.06.02.03 New sequestrate fungi from Guyana: Jimtrappea guyanensis gen. sp. nov., ARTICLE Castellanea pakaraimophila gen. sp. nov., and Costatisporus cyanescens gen. sp. nov. (Boletaceae, Boletales) Matthew E. Smith1, Kevin R. Amses2, Todd F. Elliott3, Keisuke Obase1, M. Catherine Aime4, and Terry W. Henkel2 1Department of Plant Pathology, University of Florida, Gainesville, FL 32611, USA 2Department of Biological Sciences, Humboldt State University, Arcata, CA 95521, USA; corresponding author email: Terry.Henkel@humboldt. edu 3Department of Integrative Studies, Warren Wilson College, Asheville, NC 28815, USA 4Department of Botany & Plant Pathology, Purdue University, West Lafayette, IN 47907, USA Abstract: Jimtrappea guyanensis gen. sp. nov., Castellanea pakaraimophila gen. sp. nov., and Costatisporus Key words: cyanescens gen. sp. nov. are described as new to science. These sequestrate, hypogeous fungi were collected Boletineae in Guyana under closed canopy tropical forests in association with ectomycorrhizal (ECM) host tree genera Caesalpinioideae Dicymbe (Fabaceae subfam. Caesalpinioideae), Aldina (Fabaceae subfam. Papilionoideae), and Pakaraimaea Dipterocarpaceae (Dipterocarpaceae). Molecular data place these fungi in Boletaceae (Boletales, Agaricomycetes, Basidiomycota) ectomycorrhizal fungi and inform their relationships to other known epigeous and sequestrate taxa within that family. Macro- and gasteroid fungi micromorphological characters, habitat, and multi-locus DNA sequence data are provided for each new taxon. Guiana Shield Unique morphological features and a molecular phylogenetic analysis of 185 taxa across the order Boletales justify the recognition of the three new genera. Article info: Submitted: 31 May 2015; Accepted: 19 September 2015; Published: 2 October 2015. INTRODUCTION 2010, Gube & Dorfelt 2012, Lebel & Syme 2012, Ge & Smith 2013).