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J. Biochem. 111, 157-161 (1992) Primary Structures of Sardaines Z1 and Z2, Protamines Isolated from St riped Bonito (Sarda orientalis) Yoshiko Okamoto, * Katsutoshi Kuno , * * Terushige Motohiro, * * Norio Nishi, * * * Eiko Muta, * and Shoshi Ota* *Department of Biochemist **Laboratory of F ry, Daiichi College of Pharmaceutical Sciences, Minami-ku, Fukuoka, Fukuoka 815; K ood Quality Control and Analysis, Faculty of Fisheries , Kagoshima University, Kagoshima, H agoshima 890; and -Department of Polymer Science, Faculty of Science, Hokkaido University, Kita-ku, Sapporo, okkaido 060 Received for publication, October 8, 1991 Striped bonito protamine, sardaine, was isolated from the sperm of striped bonito (Sarda orientalis) by extraction with sulfuric acid followed by ion-exchange chromatography. The preparation gave a single band upon polyacrylamide gel electrophoresis. Sardaine consists of 34 amino acid residues, and its sequence is: Pro-Arg-Arg-Arg-Arg-Arg Ser(Ala)-Ser-Arg-Pro-Val-Arg-Arg-Arg-Arg-Arg-Tyr-Arg-Arg-Ser-Thr-Ala-Ala .-Arg-Arg-Arg-Arg Arg-Val-Val-Arg-Arg-Arg-Arg. At position 7, serine (sardaine Z1) is partially replaced by alanine (sardaine Z2). The ion spray mass spectrum shows that sardaines Z1 and Z2 have molecular masses of 4,612.49 and 4,596.09 Da, respectively. The sequence of sardaine Z1 is 100% identical with that of thynnine Z2 from tuna fish (both fish belong to Scombridae, Perciformes). Protamines are low-molecular-weight, highly basic pro boxypeptidase A (CPA) [EC 3.4.12.1], and DFP-treated teins which are found in the spermatic cells of fish (1-3), carboxypeptidase B (CPB) [EC 3.4.12.3] were obtained birds (4-6), and mammals (7-19).
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