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Edna Assay Development
Environmental DNA assays available for species detection via qPCR analysis at the U.S.D.A Forest Service National Genomics Center for Wildlife and Fish Conservation (NGC). Asterisks indicate the assay was designed at the NGC. This list was last updated in June 2021 and is subject to change. Please contact [email protected] with questions. Family Species Common name Ready for use? Mustelidae Martes americana, Martes caurina American and Pacific marten* Y Castoridae Castor canadensis American beaver Y Ranidae Lithobates catesbeianus American bullfrog Y Cinclidae Cinclus mexicanus American dipper* N Anguillidae Anguilla rostrata American eel Y Soricidae Sorex palustris American water shrew* N Salmonidae Oncorhynchus clarkii ssp Any cutthroat trout* N Petromyzontidae Lampetra spp. Any Lampetra* Y Salmonidae Salmonidae Any salmonid* Y Cottidae Cottidae Any sculpin* Y Salmonidae Thymallus arcticus Arctic grayling* Y Cyrenidae Corbicula fluminea Asian clam* N Salmonidae Salmo salar Atlantic Salmon Y Lymnaeidae Radix auricularia Big-eared radix* N Cyprinidae Mylopharyngodon piceus Black carp N Ictaluridae Ameiurus melas Black Bullhead* N Catostomidae Cycleptus elongatus Blue Sucker* N Cichlidae Oreochromis aureus Blue tilapia* N Catostomidae Catostomus discobolus Bluehead sucker* N Catostomidae Catostomus virescens Bluehead sucker* Y Felidae Lynx rufus Bobcat* Y Hylidae Pseudocris maculata Boreal chorus frog N Hydrocharitaceae Egeria densa Brazilian elodea N Salmonidae Salvelinus fontinalis Brook trout* Y Colubridae Boiga irregularis Brown tree snake* -
Tennessee Fish Species
The Angler’s Guide To TennesseeIncluding Aquatic Nuisance SpeciesFish Published by the Tennessee Wildlife Resources Agency Cover photograph Paul Shaw Graphics Designer Raleigh Holtam Thanks to the TWRA Fisheries Staff for their review and contributions to this publication. Special thanks to those that provided pictures for use in this publication. Partial funding of this publication was provided by a grant from the United States Fish & Wildlife Service through the Aquatic Nuisance Species Task Force. Tennessee Wildlife Resources Agency Authorization No. 328898, 58,500 copies, January, 2012. This public document was promulgated at a cost of $.42 per copy. Equal opportunity to participate in and benefit from programs of the Tennessee Wildlife Resources Agency is available to all persons without regard to their race, color, national origin, sex, age, dis- ability, or military service. TWRA is also an equal opportunity/equal access employer. Questions should be directed to TWRA, Human Resources Office, P.O. Box 40747, Nashville, TN 37204, (615) 781-6594 (TDD 781-6691), or to the U.S. Fish and Wildlife Service, Office for Human Resources, 4401 N. Fairfax Dr., Arlington, VA 22203. Contents Introduction ...............................................................................1 About Fish ..................................................................................2 Black Bass ...................................................................................3 Crappie ........................................................................................7 -
First Records of the Sicklefin Lemon Shark, Negaprion Acutidens, at Palmyra Atoll, Central Pacific
Marine Biodiversity Records, page 1 of 3. # Marine Biological Association of the United Kingdom, 2014 doi:10.1017/S175526721400116X; Vol. 7; e114; 2014 Published online First records of the sicklefin lemon shark, Negaprion acutidens, at Palmyra Atoll, central Pacific: a recent colonization event? yannis p. papastamatiou1, chelsea l. wood2, darcy bradley3, douglas j. mccauley4, amanda l. pollock5 and jennifer e. caselle6 1School of Biology, Scottish Oceans Institute, University of St Andrews, St Andrews, KY16 8LB, UK, 2Department of Ecology and Evolutionary Biology, University of Michigan, Michigan 48109, USA, 3Bren School of Environmental Science and Management, University of California Santa Barbara, CA 93106, USA, 4Department of Ecology, Evolution and Marine Biology, University of California Santa Barbara, CA 93106, USA, 5US Fish and Wildlife Service, Hawaii, 96850, USA, 6Marine Science Institute, University of California Santa Barbara, CA 93106, USA The range of the sicklefin lemon shark (Negaprion acutidens) is expanded to include Palmyra Atoll, in the Northern Line Islands, central Pacific. Despite the fact that researchers have been studying reef and lagoon flat habitats of the Atoll since 2003, lemon sharks were first observed in 2010, suggesting a recent colonization event. To date, only juveniles and sub-adult sharks have been observed. Keywords: competition, Line Islands, range expansion, sharks Submitted 15 August 2014; accepted 23 September 2014 INTRODUCTION MATERIALS AND METHODS Shark reproduction does not involve a larval stage, so dispersal Study site can occur only through swimming of neonate, juvenile, or adult individuals from one location to another (Heupel Observations were made at Palmyra Atoll (5854′N 162805′W), et al., 2010; Lope˙z-Garro et al., 2012; Whitney et al., 2012). -
IATTC-94-01 the Tuna Fishery, Stocks, and Ecosystem in the Eastern
INTER-AMERICAN TROPICAL TUNA COMMISSION 94TH MEETING Bilbao, Spain 22-26 July 2019 DOCUMENT IATTC-94-01 REPORT ON THE TUNA FISHERY, STOCKS, AND ECOSYSTEM IN THE EASTERN PACIFIC OCEAN IN 2018 A. The fishery for tunas and billfishes in the eastern Pacific Ocean ....................................................... 3 B. Yellowfin tuna ................................................................................................................................... 50 C. Skipjack tuna ..................................................................................................................................... 58 D. Bigeye tuna ........................................................................................................................................ 64 E. Pacific bluefin tuna ............................................................................................................................ 72 F. Albacore tuna .................................................................................................................................... 76 G. Swordfish ........................................................................................................................................... 82 H. Blue marlin ........................................................................................................................................ 85 I. Striped marlin .................................................................................................................................... 86 J. Sailfish -
Huchen (Hucho Hucho) ERSS
Huchen (Hucho hucho) Ecological Risk Screening Summary U.S. Fish & Wildlife Service, April 2011 Revised, January 2019, February 2019 Web Version, 4/30/2019 Photo: Liquid Art. Licensed under CC-SA 4.0 International. Available: https://commons.wikimedia.org/wiki/File:Danube_Salmon_-_Huchen_(Hucho_hucho).jpg. (January 2019). 1 Native Range and Status in the United States Native Range From Froese and Pauly (2019): “Europe: Danube drainage [Austria, Bosnia and Herzegovina, Bulgaria, Croatia, Germany, Hungary, Italy, Romania, Serbia, Slovakia, Slovenia, Switzerland, and Ukraine].” “Population has declined [in Slovenia] due to pollution and river regulation. Conservation measures include artificial propagation and stocking [Povz 1996]. Status of threat: Regionally extinct [Bianco and Ketmaier 2016].” 1 “Considered locally extinct (extirpated) in 1990 [in Switzerland] [Vilcinskas 1993].” “Extinct in the wild in 2000 [in Czech Republic] [Lusk and Hanel 2000]. This species is a native species in the basin of the Black Sea (the rivers Morava and Dyje). At present, its local and time- limited occurrence depends on the stocking material from artificial culture. Conditions that will facilitate the formation of a permanent population under natural conditions are not available [Lusk et al. 2004]. […] Status of threat: extinct in the wild [Lusk et al. 2011].” From Freyhof and Kottelat (2008): “The species is severely fragmented within the Danube drainage, where most populations exclusively depend on stocking and natural reproduction is very limited due to habitat alterations and flow regime changes.” From Grabowska et al. (2010): “The exceptional case is huchen (or Danubian salmon), Hucho hucho. The huchen’s native range in Poland was restricted to two small rivers (Czarna Orawa and Czadeczka) of the Danube River basin, […]” Status in the United States Froese and Pauly (2019) report an introduction to the United States between 1870 and 1874 that did not result in an established population. -
Dicentrarchus Labrax)
SCIENTIA MARINA 78(4) December 2014, 493-503, Barcelona (Spain) ISSN-L: 0214-8358 doi: http://dx.doi.org/10.3989/scimar.03992.02C Fitness difference between cryptic salinity-related phenotypes of sea bass (Dicentrarchus labrax) Bruno Guinand 1,2, Nolwenn Quéré 1,2, Frédérique Cerqueira 1,3, Erick Desmarais 1,3, François Bonhomme 1,2 1 Institut des Sciences de l’Evolution de Montpellier, CNRS-UMR 5554 (Université Montpellier 2), cc65, 34095 Montpellier cedex 5, France. E-mail: [email protected] 2 Station Méditerranéenne de l’Environnement Littoral, 2 Avenue des Chantiers, 34200 Sète, France. 3 LabEx CeMEB (Centre Méditerranéen Environnement Biodiversité), Université Montpellier II, place E. Bataillon, cc63, 34095 Montpellier Cedex 5, France. Summary: The existence of cryptic salinity-related phenotypes has been hypothesized in the “euryhaline” sea bass (Dicen- trarchus labrax). How differential osmoregulation costs between freshwater and saltwater environments affect fitness and phenotypic variation is misunderstood in this species. During an experiment lasting around five months, we investigated changes in the whole body mass and in the expression of growth-related genes (insulin-like growth factor 1 [IGF-1]; growth hormone receptor [GHR]) in the intestine and the liver of sea bass thriving in sea water (SSW), successfully acclimated to freshwater (SFW), and unsuccessfully acclimated to freshwater (UFW). Albeit non-significant, a trend toward change in body mass was demonstrated among SSW, UFW and SFW fish, suggesting that SSW fish were a mixture of the other phe- notypes. Several mortality peaks were observed during the experiment, with batches of UFW fish showing higher expression in the osmoregulatory intestine due to down-regulation of genes in the liver and significant up-regulation of GHR in the intestine compared with SFW fish. -
Review of Analysis of Fish Remains at Chumash Sites
A Review of the Analysis of Fish Remains in Chumash Sites Noel Van Slyke Abstract The paper begins with a review of techniques that can be used to analyze fish remains in archaeological sites. The remains can be used to identify the fish species and to estimate such details as fish size and weight, minimum number of individuals represented, and season of capture, and to make judgments about fishing techniques and subsistence patterns. The review of analysis techniques is followed by a discussion of the analysis that has been reported for fish remains from Chumash sites. The paper concludes with comments on the analysis of fish remains from Chumash sites. The inspiration of this paper came from a Christmas present. The present was the book Early Hunter-Gatherers of the California Coast, by Jon M. Erlandson (1994). I was impressed by the level of analysis of fish remains and faunal remains in general. I had previously read earlier reports where the level of analysis was more basic. The topic for this paper then evolved as an attempt to review the change in analysis of fish remains over the years and to look at where further analysis of earlier data might be promising. The Analysis of Fish Remains The basis of all analysis of fish remains is species identification. Once the species have been identified other areas of analysis such as quantification, estimates of size, seasonality consid- erations, exploitation, and subsistence evaluation can be investigated. Identification Identification is the primary step in fish remains analysis. Identification of the species allows other analyses to proceed such as quantification, size estimation, seasonality, and exploitation. -
D4.3 3 Newsletter 3 Aquatt AQUAEXCEL 2020 Deliverable D4.3 3
D4.3_3 Newsletter 3 AquaTT AQUAEXCEL 2020 Deliverable D4.3_3 Executive Summary Objectives The objective of the newsletter is to facilitate communication and dissemination of the AQUAEXCEL 2020 project ensuring a widespread awareness to all stakeholders. This third newsletter aims to communicate newest AQUAEXCEL 2020 research advances as well as its Transnational Access (TNA) and training course programme, and to introduce another one of the studied species in AQUAEXCEL 2020 and other information of interest. Rationale: AquaTT designed the newsletter following the brand identity of the project (logo, characterising project colours, etc). Content has been based on activities carried out in the project so far like events and research findings, the TNA programme, one of the aquaculture species and general information of interest. The draft newsletter was sent to all AQUAEXCEL 2020 partners to validate the content of the third newsletter. The final newsletter has been sent out to the project partners, stakeholder database contacts and any other interested individuals. The AQUAEXCEL 2020 project website and the collaborative platform will store the newsletter archive. Main Results: The third AQUAEXCEL 2020 newsletter is 8 pages long and features ‘AQUAEXCEL2020 News and Highlights’ like a success story from the TNA programme of AQUAEXCEL 2020 , new publications and feature promotional articles, as well as past events like the Industry & Research Advisory Panel (IRAP) meeting and upcoming events. Emphasis is on the major components of AQUAEXCEL 2020 , the ‘TNA programme’ including the featured success story, the next Calls for Access and a feature of a partner’s TNA facility, as well as an announcement of the ‘Training Courses’. -
Summary Report of Freshwater Nonindigenous Aquatic Species in U.S
Summary Report of Freshwater Nonindigenous Aquatic Species in U.S. Fish and Wildlife Service Region 4—An Update April 2013 Prepared by: Pam L. Fuller, Amy J. Benson, and Matthew J. Cannister U.S. Geological Survey Southeast Ecological Science Center Gainesville, Florida Prepared for: U.S. Fish and Wildlife Service Southeast Region Atlanta, Georgia Cover Photos: Silver Carp, Hypophthalmichthys molitrix – Auburn University Giant Applesnail, Pomacea maculata – David Knott Straightedge Crayfish, Procambarus hayi – U.S. Forest Service i Table of Contents Table of Contents ...................................................................................................................................... ii List of Figures ............................................................................................................................................ v List of Tables ............................................................................................................................................ vi INTRODUCTION ............................................................................................................................................. 1 Overview of Region 4 Introductions Since 2000 ....................................................................................... 1 Format of Species Accounts ...................................................................................................................... 2 Explanation of Maps ................................................................................................................................ -
Diet of Larval Albacore Thunnus Alalunga (Bonnaterre, 1788) Off Mallorca Island (NW Mediterranean)
SCIENTIA MARINA 71(2) June 2007, 347-354, Barcelona (Spain) ISSN: 0214-8358 Diet of larval albacore Thunnus alalunga (Bonnaterre, 1788) off Mallorca Island (NW Mediterranean) IGNACIO ALBERTO CATALÁN1, FRANCISCO ALEMANY1, ANA MORILLAS1 and BEATRIZ MORALES-NIN2 1IEO-Centre Oceanogràfic de Balears, Moll de Ponent s/n, CP 07015, Palma de Mallorca, Illes Balears, Spain. E-mail: [email protected] 2 Grupo de Oceanografía Interdisciplinar, Institut Mediterrani d’Estudis Avançats, UIB/CSIC, 21 Miguel Marques, CP 07190, Esporles, Illes Balears, Spain SUMMARY: These are the first data on the feeding of larval albacore (Thunnus alalunga Bonnaterre, 1788) in the Mediterranean. Specimens were gathered from day-time bongo-hauls conducted over the SW Mallorcan (Balearic Islands) shelf-slope. Ninety eight percent of 101 individuals ranging from 2.65 to 9.4 mm standard length (SL) contained 1 to 15 prey items per gut. Mean number of prey/gut was 3.55 ± 2.19 (SD). A positive correlation was found between larval SL and the number of prey/gut. The analysis of frequency of occurrence (F), numerical frequency (N), weight frequency (W) and the Index of Relative Importance (IRI) showed a dominance of copepodites and nauplii in the smallest size-class. As larvae grew, cladocerans and Calanoida copepodites dominated the diet, and cladocerans and copepodites were important in F, N and W. Piscivory was observed after notochord flexion and was important in terms of W. A positive correlation between mean prey size and both SL and lower jaw length (LJL) was observed. The niche breadth (S) did not vary with LJL, but the raw prey size range did. -
Imagine the Silver Beauty and the Fighting Spirit of Atlantic Salmon; The
Sakhalin Silver Text and Photos: Clemens Ratschan Imagine the silver beauty and the fighting spirit of Atlantic salmon; the complex, unpredictable life- history of sea trout and combine with the ferocious take and body mass of a predatory taimen. This will give you a glimpse of what fishing for Sakhalin taimen, the silver of the Russian Far East, is about. AM PLEASED TO introduce Siberian taimen, Hucho taimen. No this fish to the readers of wonder, scientists also erroneously Chasing Silver, because in related this far-eastern species to many respects it forms a the large-sized, non-anadromous missing link between the predators of the genus Hucho, which Ifishery for anadromous salmon and is a branch of the salmonoid tree for huchen, a big predatory non- that occurs exclusively in Eurasia. anadromous salmonoid in my home In Central Europe, Hucho hucho is country of Austria (‘Danube salmon’ restricted to the Danube System, in English. See article “Taimen” by where self-sustaining stocks are Wolfgang Hauer, issue 3/2010). presently only found in a handful of Sakhalin taimen is one of the rivers in Germany, Austria, Slovakia least-known salmonid species among and former Yugoslavia. Huchen is non-Russian fishermen; even many very closely related to the already- Russians tend to confuse it with the mentioned Siberian taimen. The latter | 62 | Chasing Silver Fly Fishing Magazine April’s Fav Five www.chasingsilvermagazine.com | 63 | Sakhalin Silver inhabits a distant, vast range from a habits. But one ecological feature expeditions to Japan. Later, the fish few places in European Russia to the is unique – all members of the true was assigned to the genus Parahucho, Lena and Amur rivers in the very far huchen live exclusively in fresh water, with regard to some obvious east of northern Asia. -
The Biology and Ecology of the Common Cuttlefish (Sepia Officinalis)
Supporting Sustainable Sepia Stocks Report 1: The biology and ecology of the common cuttlefish (Sepia officinalis) Daniel Davies Kathryn Nelson Sussex IFCA 2018 Contents Summary ................................................................................................................................................. 2 Acknowledgements ................................................................................................................................. 2 Introduction ............................................................................................................................................ 3 Biology ..................................................................................................................................................... 3 Physical description ............................................................................................................................ 3 Locomotion and respiration ................................................................................................................ 4 Vision ................................................................................................................................................... 4 Chromatophores ................................................................................................................................. 5 Colour patterns ................................................................................................................................... 5 Ink sac and funnel organ