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Major Clades of Agaricales: a Multilocus Phylogenetic Overview
Mycologia, 98(6), 2006, pp. 982–995. # 2006 by The Mycological Society of America, Lawrence, KS 66044-8897 Major clades of Agaricales: a multilocus phylogenetic overview P. Brandon Matheny1 Duur K. Aanen Judd M. Curtis Laboratory of Genetics, Arboretumlaan 4, 6703 BD, Biology Department, Clark University, 950 Main Street, Wageningen, The Netherlands Worcester, Massachusetts, 01610 Matthew DeNitis Vale´rie Hofstetter 127 Harrington Way, Worcester, Massachusetts 01604 Department of Biology, Box 90338, Duke University, Durham, North Carolina 27708 Graciela M. Daniele Instituto Multidisciplinario de Biologı´a Vegetal, M. Catherine Aime CONICET-Universidad Nacional de Co´rdoba, Casilla USDA-ARS, Systematic Botany and Mycology de Correo 495, 5000 Co´rdoba, Argentina Laboratory, Room 304, Building 011A, 10300 Baltimore Avenue, Beltsville, Maryland 20705-2350 Dennis E. Desjardin Department of Biology, San Francisco State University, Jean-Marc Moncalvo San Francisco, California 94132 Centre for Biodiversity and Conservation Biology, Royal Ontario Museum and Department of Botany, University Bradley R. Kropp of Toronto, Toronto, Ontario, M5S 2C6 Canada Department of Biology, Utah State University, Logan, Utah 84322 Zai-Wei Ge Zhu-Liang Yang Lorelei L. Norvell Kunming Institute of Botany, Chinese Academy of Pacific Northwest Mycology Service, 6720 NW Skyline Sciences, Kunming 650204, P.R. China Boulevard, Portland, Oregon 97229-1309 Jason C. Slot Andrew Parker Biology Department, Clark University, 950 Main Street, 127 Raven Way, Metaline Falls, Washington 99153- Worcester, Massachusetts, 01609 9720 Joseph F. Ammirati Else C. Vellinga University of Washington, Biology Department, Box Department of Plant and Microbial Biology, 111 355325, Seattle, Washington 98195 Koshland Hall, University of California, Berkeley, California 94720-3102 Timothy J. -
<I>Clitopilus Byssisedoides</I>
MYCOTAXON Volume 112, pp. 225–229 April–June 2010 Clitopilus byssisedoides, a new species from a hothouse in Germany Machiel Noordeloos1, Delia Co-David1 & Andreas Gminder2 [email protected] Netherlands Centre for Biodiversity Naturalis (section NHN) P.O. Box 9514, 2300 RA Leiden, The Netherlands 2Dorfstrasse 27, D-07751 Jena, Germany Abstract — Clitopilus byssisedoides is described as a new species found in a hothouse in Botanischer Garten Jena, in Jena, Germany, of unknown, possibly tropical origin. In this study, it is described, illustrated and distinguished from other pleurotoid Clitopilus species with rhodocyboid spores, particularly from other members of (Rhodocybe) sect. Claudopodes Key words — Entolomataceae, phylogeny, taxonomy Introduction Gminder (2005) described a remarkable pleurotoid species with rhodocyboid spores from a hothouse in the botanical garden in Jena, Germany. It was provisionally called “Rhodocybe byssisedoides” because of its resemblance to Entoloma byssisedum (Pers.) Donk. In a recent molecular phylogenetic study of the Entolomataceae (where this new species was included as “Rhodocybe sp.”), it has been shown that Clitopilus is nested within Rhodocybe. As a result, both genera were merged into Clitopilus sensu lato (Co-David et al. 2009). In this study, we formally describe the new species, Clitopilus byssisedoides and compare it to the other pleurotoid taxa. Material and methods The morphology was studied on dried material with standard methods, using sections mounted in either ammonia 5% or Congo red and a Leica DM1000 microscope. Microscopic structures were drawn with help of a drawing tube. 226 ... Noordeloos, Co-David & Gminder Taxonomic description Clitopilus byssisedoides Gminder, Noordel. & Co-David, sp. nov. MycoBank # 515443 Fig. -
Cuivre Bryophytes
Trip Report for: Cuivre River State Park Species Count: 335 Date: Multiple Visits Lincoln County Agency: MODNR Location: Lincoln Hills - Bryophytes Participants: Bryophytes from Natural Resource Inventory Database Bryophyte List from NRIDS and Bruce Schuette Species Name (Synonym) Common Name Family COFC COFW Acarospora unknown Identified only to Genus Acarosporaceae Lichen Acrocordia megalospora a lichen Monoblastiaceae Lichen Amandinea dakotensis a button lichen (crustose) Physiaceae Lichen Amandinea polyspora a button lichen (crustose) Physiaceae Lichen Amandinea punctata a lichen Physiaceae Lichen Amanita citrina Citron Amanita Amanitaceae Fungi Amanita fulva Tawny Gresette Amanitaceae Fungi Amanita vaginata Grisette Amanitaceae Fungi Amblystegium varium common willow moss Amblystegiaceae Moss Anisomeridium biforme a lichen Monoblastiaceae Lichen Anisomeridium polypori a crustose lichen Monoblastiaceae Lichen Anomodon attenuatus common tree apron moss Anomodontaceae Moss Anomodon minor tree apron moss Anomodontaceae Moss Anomodon rostratus velvet tree apron moss Anomodontaceae Moss Armillaria tabescens Ringless Honey Mushroom Tricholomataceae Fungi Arthonia caesia a lichen Arthoniaceae Lichen Arthonia punctiformis a lichen Arthoniaceae Lichen Arthonia rubella a lichen Arthoniaceae Lichen Arthothelium spectabile a lichen Uncertain Lichen Arthothelium taediosum a lichen Uncertain Lichen Aspicilia caesiocinerea a lichen Hymeneliaceae Lichen Aspicilia cinerea a lichen Hymeneliaceae Lichen Aspicilia contorta a lichen Hymeneliaceae Lichen -
Matsis and Wannabees: a Primer on Pine Mushrooms
Britt A. Bunyard [email protected] Figure 1. Three matsutakes? Look again. These three Tricholoma species were collected by John Sparks in New Mexico and growing within 100 feet of one another. From left to right, Tricholoma focale, T. caligatum, and T. magnivelare. Identifications were confirmed with DNA analysis by Dr. Clark Ovrebo. Photo courtesy of J. Sparks. described (Arora, 1979). And what of rumors that we have the “true” matsutake of Asia in parts of North America? Whether you call it pine mushroom or matsutake (or simply the more affectionate nickname “matsi”), there can be no question that this mushroom is one of the most highly prized in the world. It can be an acquired taste to Westerners (I personally love them!); among Japanese this mushroom is king, with prices for top specimens fetching kings’ ransoms. Annually, Japanese matsutake mavens will spend US$50-100 for a single top quality specimen and prices many times this are regularly reported. Because the demand far f you reside in Canada you likely call exceeds the supply in Japan (97% of them pine mushrooms; in the USA, matsutake mushrooms consumed in most refer to them by their Japanese Japan, annually, are imported, according Iname, matsutake. Is it Tricholoma to the Japanese Tariff Association magnivelare or T. matsutake? And what [Ota et al., 2012]), commercial about those other matsi lookalikes? pickers descend upon North America Some smell remarkably similar to the (especially in the Pacific Northwest) Figure 2. Catathelasma imperiale “provocative compromise between every autumn with hopes of striking red hots and dirty socks” that Arora from Vancouver Island, British gold. -
A Nomenclatural Study of Armillaria and Armillariella Species
A Nomenclatural Study of Armillaria and Armillariella species (Basidiomycotina, Tricholomataceae) by Thomas J. Volk & Harold H. Burdsall, Jr. Synopsis Fungorum 8 Fungiflora - Oslo - Norway A Nomenclatural Study of Armillaria and Armillariella species (Basidiomycotina, Tricholomataceae) by Thomas J. Volk & Harold H. Burdsall, Jr. Printed in Eko-trykk A/S, Førde, Norway Printing date: 1. August 1995 ISBN 82-90724-14-4 ISSN 0802-4966 A Nomenclatural Study of Armillaria and Armillariella species (Basidiomycotina, Tricholomataceae) by Thomas J. Volk & Harold H. Burdsall, Jr. Synopsis Fungorum 8 Fungiflora - Oslo - Norway 6 Authors address: Center for Forest Mycology Research Forest Products Laboratory United States Department of Agriculture Forest Service One Gifford Pinchot Dr. Madison, WI 53705 USA ABSTRACT Once a taxonomic refugium for nearly any white-spored agaric with an annulus and attached gills, the concept of the genus Armillaria has been clarified with the neotypification of Armillaria mellea (Vahl:Fr.) Kummer and its acceptance as type species of Armillaria (Fr.:Fr.) Staude. Due to recognition of different type species over the years and an extremely variable generic concept, at least 274 species and varieties have been placed in Armillaria (or in Armillariella Karst., its obligate synonym). Only about forty species belong in the genus Armillaria sensu stricto, while the rest can be placed in forty-three other modem genera. This study is based on original descriptions in the literature, as well as studies of type specimens and generic and species concepts by other authors. This publication consists of an alphabetical listing of all epithets used in Armillaria or Armillariella, with their basionyms, currently accepted names, and other obligate and facultative synonyms. -
Plant Life MagillS Encyclopedia of Science
MAGILLS ENCYCLOPEDIA OF SCIENCE PLANT LIFE MAGILLS ENCYCLOPEDIA OF SCIENCE PLANT LIFE Volume 4 Sustainable Forestry–Zygomycetes Indexes Editor Bryan D. Ness, Ph.D. Pacific Union College, Department of Biology Project Editor Christina J. Moose Salem Press, Inc. Pasadena, California Hackensack, New Jersey Editor in Chief: Dawn P. Dawson Managing Editor: Christina J. Moose Photograph Editor: Philip Bader Manuscript Editor: Elizabeth Ferry Slocum Production Editor: Joyce I. Buchea Assistant Editor: Andrea E. Miller Page Design and Graphics: James Hutson Research Supervisor: Jeffry Jensen Layout: William Zimmerman Acquisitions Editor: Mark Rehn Illustrator: Kimberly L. Dawson Kurnizki Copyright © 2003, by Salem Press, Inc. All rights in this book are reserved. No part of this work may be used or reproduced in any manner what- soever or transmitted in any form or by any means, electronic or mechanical, including photocopy,recording, or any information storage and retrieval system, without written permission from the copyright owner except in the case of brief quotations embodied in critical articles and reviews. For information address the publisher, Salem Press, Inc., P.O. Box 50062, Pasadena, California 91115. Some of the updated and revised essays in this work originally appeared in Magill’s Survey of Science: Life Science (1991), Magill’s Survey of Science: Life Science, Supplement (1998), Natural Resources (1998), Encyclopedia of Genetics (1999), Encyclopedia of Environmental Issues (2000), World Geography (2001), and Earth Science (2001). ∞ The paper used in these volumes conforms to the American National Standard for Permanence of Paper for Printed Library Materials, Z39.48-1992 (R1997). Library of Congress Cataloging-in-Publication Data Magill’s encyclopedia of science : plant life / edited by Bryan D. -
Pipestem Foray Overview
Volume 49:1 January ⁄ February 2008 www.namyco.org Pipestem Foray Overview An East-Coaster’s Perspective A West-Coaster’s Perspective by Dave Wasilewski by Debbie Viess For about 25 years now I have As Steve Trudell rightly pointed out hunted and studied wild mush- to me, don’t gloat about your mush- rooms, but I’ve never been active in rooms until they are safely in your a club. The NAMA Orson K. Miller basket! The continuing “Curse of Memorial Foray held in Pipestem, NAMA” (some call it global warm- WV, this past August was the first ing) slipped in the back door, behind such event that I have ever at- the earlier and heartening West tended. Virginia thunderstorms. Extreme I must admit that, as I drove heat and lack of rain for the previ- south on Interstate 81 through two ous couple of weeks made condi- solid hours of Pennsylvania rainfall tions on the ground challenging for on an eight-hour trip to a place hopeful finders of fungi. Chlorosplenium aeruginascens, one of where little or no rain had fallen for Luckily, my Southern Belle the many delights found at Pipestem. over a week, for the purpose of hostess with the mostest, Coleman hunting wild mushrooms, I felt a bit McCleneghan, took me on a few names like Gyroporus and Pulvero- conflicted. My mind wandered pre-NAMA forays in Virginia, where boletus, tucked among the through conifer groves in the conditions were much improved. My many shades of forest green and Poconos where imaginary boletes very first walk ever along the brown. -
Molecular Phylogeny and Spore Evolution of Entolomataceae
Persoonia 23, 2009: 147–176 www.persoonia.org RESEARCH ARTICLE doi:10.3767/003158509X480944 Molecular phylogeny and spore evolution of Entolomataceae D. Co-David1, D. Langeveld1, M.E. Noordeloos1 Key words Abstract The phylogeny of the Entolomataceae was reconstructed using three loci (RPB2, LSU and mtSSU) and, in conjunction with spore morphology (using SEM and TEM), was used to address four main systematic issues: 1) the Clitopilus monophyly of the Entolomataceae; 2) inter-generic relationships within the Entolomataceae; 3) genus delimitation Entoloma of Entolomataceae; and 4) spore evolution in the Entolomataceae. Results confirm that the Entolomataceae (Ento Entolomataceae loma, Rhodocybe, Clitopilus, Richoniella and Rhodogaster) is monophyletic and that the combination of pinkish Rhodocybe spore prints and spores having bumps and/or ridges formed by an epicorium is a synapomorphy for the family. Rhodogaster The Entolomataceae is made up of two sister clades: one with Clitopilus nested within Rhodocybe and another Richoniella with Richoniella and Rhodogaster nested within Entoloma. Entoloma is best retained as one genus. The smaller spore evolution genera within Entoloma s.l. are either polyphyletic or make other genera paraphyletic. Spores of the clitopiloid type are derived from rhodocyboid spores. The ancestral spore type of the Entolomataceae was either rhodocyboid or entolomatoid. Taxonomic and nomenclatural changes are made including merging Rhodocybe into Clitopilus and transferring relevant species into Clitopilus and Entoloma. Article info Received: 21 April 2009; Accepted: 14 October 2009; Published: 19 November 2009. INTRODUCTION Monophyly of the Entolomataceae and intergeneric relationships The euagaric family Entolomataceae Kotl. & Pouzar is very The members of Entolomataceae have been classified together species-rich. -
A Preliminary Checklist of Arizona Macrofungi
A PRELIMINARY CHECKLIST OF ARIZONA MACROFUNGI Scott T. Bates School of Life Sciences Arizona State University PO Box 874601 Tempe, AZ 85287-4601 ABSTRACT A checklist of 1290 species of nonlichenized ascomycetaceous, basidiomycetaceous, and zygomycetaceous macrofungi is presented for the state of Arizona. The checklist was compiled from records of Arizona fungi in scientific publications or herbarium databases. Additional records were obtained from a physical search of herbarium specimens in the University of Arizona’s Robert L. Gilbertson Mycological Herbarium and of the author’s personal herbarium. This publication represents the first comprehensive checklist of macrofungi for Arizona. In all probability, the checklist is far from complete as new species await discovery and some of the species listed are in need of taxonomic revision. The data presented here serve as a baseline for future studies related to fungal biodiversity in Arizona and can contribute to state or national inventories of biota. INTRODUCTION Arizona is a state noted for the diversity of its biotic communities (Brown 1994). Boreal forests found at high altitudes, the ‘Sky Islands’ prevalent in the southern parts of the state, and ponderosa pine (Pinus ponderosa P.& C. Lawson) forests that are widespread in Arizona, all provide rich habitats that sustain numerous species of macrofungi. Even xeric biomes, such as desertscrub and semidesert- grasslands, support a unique mycota, which include rare species such as Itajahya galericulata A. Møller (Long & Stouffer 1943b, Fig. 2c). Although checklists for some groups of fungi present in the state have been published previously (e.g., Gilbertson & Budington 1970, Gilbertson et al. 1974, Gilbertson & Bigelow 1998, Fogel & States 2002), this checklist represents the first comprehensive listing of all macrofungi in the kingdom Eumycota (Fungi) that are known from Arizona. -
A Re-Evaluation of Gasteroid and Cyphelloid Species of Entolomataceae from Eastern North America
A RE-EvALUATiON Of gASTEROiD AND CyPHELLOiD SPECiES Of Entolomataceae fROM EASTERN North AMERiCA TimoThy J. Baroni1 and P. Brandon maTheny2 Abstract. The gasteroid genus Richoniella and the cyphelloid genus Rhodocybella (Entolomataceae) are poorly known fungal genera that have yet to be evaluated in depth in a molecular phylogenetic context. Here, we report a recent find, including detailed descriptions and photographs, of the rarely collected gasteroid species Richo- niella asterospora from southeast North America. Phylogenetic placement of this species within a multi-gene treatment of the Entolomataceae supports the polyphyly of Richoniella. Richoniella asterospora shares an alli- ance with agaricoid and secotioid species within the diverse, heteromorphic genus Entoloma. Also rarely encoun- tered is the cyphelloid genus Rhodocybella, known only from southeast North America. Molecular annotation and phylogenetic analysis of the holotype suggest an affiliation with two lignicolous European pileate-stipitate species of Entoloma, E. pluteisimilis and E. zuccherellii. Results from molecular annotation of three additional species of Entolomataceae are also reported. in addition, we propose recognition of the following robust mono- phyletic groups: the Pouzarella clade within the genus Entoloma; and the genera Rhodocybe and Clitopilopsis and the Rhodophana clade, apart from the genus Clitopilus, within which they have been recently subsumed. Both Richoniella asterospora and Rhodocybella rhododendri are transferred to the genus Entoloma to maintain its monophyly. Keywords: Agaricales, rare fungi, Rhodocybella, Richoniella, systematics, type specimens. Phylogenetic placement of species of Entolomataceae. Rhodogaster is not known Entolomataceae, a highly diverse family of from North America and only one species of Agaricales with ca. 1100 described species Richoniella, R. -
PERSOONIAL R Eflections
Persoonia 23, 2009: 177–208 www.persoonia.org doi:10.3767/003158509X482951 PERSOONIAL R eflections Editorial: Celebrating 50 years of Fungal Biodiversity Research The year 2009 represents the 50th anniversary of Persoonia as the message that without fungi as basal link in the food chain, an international journal of mycology. Since 2008, Persoonia is there will be no biodiversity at all. a full-colour, Open Access journal, and from 2009 onwards, will May the Fungi be with you! also appear in PubMed, which we believe will give our authors even more exposure than that presently achieved via the two Editors-in-Chief: independent online websites, www.IngentaConnect.com, and Prof. dr PW Crous www.persoonia.org. The enclosed free poster depicts the 50 CBS Fungal Biodiversity Centre, Uppsalalaan 8, 3584 CT most beautiful fungi published throughout the year. We hope Utrecht, The Netherlands. that the poster acts as further encouragement for students and mycologists to describe and help protect our planet’s fungal Dr ME Noordeloos biodiversity. As 2010 is the international year of biodiversity, we National Herbarium of the Netherlands, Leiden University urge you to prominently display this poster, and help distribute branch, P.O. Box 9514, 2300 RA Leiden, The Netherlands. Book Reviews Mu«enko W, Majewski T, Ruszkiewicz- The Cryphonectriaceae include some Michalska M (eds). 2008. A preliminary of the most important tree pathogens checklist of micromycetes in Poland. in the world. Over the years I have Biodiversity of Poland, Vol. 9. Pp. personally helped collect populations 752; soft cover. Price 74 €. W. Szafer of some species in Africa and South Institute of Botany, Polish Academy America, and have witnessed the of Sciences, Lubicz, Kraków, Poland. -
Clitopilus Austroprunulus Fungal Planet Description Sheets 199
198 Persoonia – Volume 29, 2012 Clitopilus austroprunulus Fungal Planet description sheets 199 Fungal Planet 153 – 20 December 2012 Clitopilus austroprunulus Morgado, G.M. Gates & Noordel., sp. nov. Etymology. austro (L) = southern, being a southern counterpart of Clito lated species, C. cystidiatus and C. chrischonensis are phy- pilus prunulus. logenetically distinct and differ from C. austroprunulus in mor- Macroscopic description — Pileus 40–90 mm diam, con- phology by the abundant presence of cheilocystidia. Although vex when young, expanding to concave or infundibuliform, judging from the phylogeny presented here, the occurrence of with involute margin, becoming irregularly shaped with age cheilocystidia may well be of limited value in the systematics with undulating marginal zone. Not hygrophanous, not trans- of this group. Clitopilus amygdaliformis described from China lucently striate, uniformly pale grey, sometimes with a slight (Yang 2007) is also closely related, but differs in spore and brown tinge at the centre (10YR 7/3–4), adpressed-tomen- stipe morphology. Unfortunately, sequences for this species tose all over. Lamellae arcuate-decurrent, grey-pink with en- are not available in public databases and therefore it was not tire, concolorous or more or less hyaline edge, crowded. Stipe included in the phylogenetic analysis. 30–60 × 10–15 mm (apex), usually central, rarely eccentric, A multi-gene maximum-likelihood phylogeny based on four tapering towards base, white or with a greyish brown tinge independent genetic markers (data not shown) yielded the like pileus, tomentose. Context white, firm and rather thick in same conclusions as the ITS phylogeny presented here. pileus. Odour very strongly farinaceous-rancid. Taste farina- Therefore C.