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Generic and Subtribal Relationships in Neotropical Cymbidieae (Orchidaceae) Based on Matk/Ycf1 Plastid Data
LANKESTERIANA 13(3): 375—392. 2014. I N V I T E D P A P E R* GENERIC AND SUBTRIBAL RELATIONSHIPS IN NEOTROPICAL CYMBIDIEAE (ORCHIDACEAE) BASED ON MATK/YCF1 PLASTID DATA W. MARK WHITTEN1,2, KURT M. NEUBIG1 & N. H. WILLIAMS1 1Florida Museum of Natural History, University of Florida Gainesville, FL 32611-7800 USA 2Corresponding author: [email protected] ABSTRACT. Relationships among all subtribes of Neotropical Cymbidieae (Orchidaceae) were estimated using combined matK/ycf1 plastid sequence data for 289 taxa. The matrix was analyzed using RAxML. Bootstrap (BS) analyses yield 100% BS support for all subtribes except Stanhopeinae (87%). Generic relationships within subtribes are highly resolved and are generally congruent with those presented in previous studies and as summarized in Genera Orchidacearum. Relationships among subtribes are largely unresolved. The Szlachetko generic classification of Maxillariinae is not supported. A new combination is made for Maxillaria cacaoensis J.T.Atwood in Camaridium. KEY WORDS: Orchidaceae, Cymbidieae, Maxillariinae, matK, ycf1, phylogenetics, Camaridium, Maxillaria cacaoensis, Vargasiella Cymbidieae include many of the showiest align nrITS sequences across the entire tribe was Neotropical epiphytic orchids and an unparalleled unrealistic due to high levels of sequence divergence, diversity in floral rewards and pollination systems. and instead to concentrate our efforts on assembling Many researchers have posed questions such as a larger plastid data set based on two regions (matK “How many times and when has male euglossine and ycf1) that are among the most variable plastid bee pollination evolved?”(Ramírez et al. 2011), or exon regions and can be aligned with minimal “How many times have oil-reward flowers evolved?” ambiguity across broad taxonomic spans. -
Contents Contents
Traveler’s Guide WILDLIFE WATCHINGTraveler’s IN PERU Guide WILDLIFE WATCHING IN PERU CONTENTS CONTENTS PERU, THE NATURAL DESTINATION BIRDS Northern Region Lambayeque, Piura and Tumbes Amazonas and Cajamarca Cordillera Blanca Mountain Range Central Region Lima and surrounding areas Paracas Huánuco and Junín Southern Region Nazca and Abancay Cusco and Machu Picchu Puerto Maldonado and Madre de Dios Arequipa and the Colca Valley Puno and Lake Titicaca PRIMATES Small primates Tamarin Marmosets Night monkeys Dusky titi monkeys Common squirrel monkeys Medium-sized primates Capuchin monkeys Saki monkeys Large primates Howler monkeys Woolly monkeys Spider monkeys MARINE MAMMALS Main species BUTTERFLIES Areas of interest WILD FLOWERS The forests of Tumbes The dry forest The Andes The Hills The cloud forests The tropical jungle www.peru.org.pe [email protected] 1 Traveler’s Guide WILDLIFE WATCHINGTraveler’s IN PERU Guide WILDLIFE WATCHING IN PERU ORCHIDS Tumbes and Piura Amazonas and San Martín Huánuco and Tingo María Cordillera Blanca Chanchamayo Valley Machu Picchu Manu and Tambopata RECOMMENDATIONS LOCATION AND CLIMATE www.peru.org.pe [email protected] 2 Traveler’s Guide WILDLIFE WATCHINGTraveler’s IN PERU Guide WILDLIFE WATCHING IN PERU Peru, The Natural Destination Peru is, undoubtedly, one of the world’s top desti- For Peru, nature-tourism and eco-tourism repre- nations for nature-lovers. Blessed with the richest sent an opportunity to share its many surprises ocean in the world, largely unexplored Amazon for- and charm with the rest of the world. This guide ests and the highest tropical mountain range on provides descriptions of the main groups of species Pthe planet, the possibilities for the development of the country offers nature-lovers; trip recommen- bio-diversity in its territory are virtually unlim- dations; information on destinations; services and ited. -
Contributions to a Reassessment of Costa Rican Zygopetalinae (Orchidaceae)
ZOBODAT - www.zobodat.at Zoologisch-Botanische Datenbank/Zoological-Botanical Database Digitale Literatur/Digital Literature Zeitschrift/Journal: Annalen des Naturhistorischen Museums in Wien Jahr/Year: 2001 Band/Volume: 103B Autor(en)/Author(s): Pupulin Franco Artikel/Article: Contributions to a reassessment of Costa Rican Zygopetalinae (Orchidaceae). The genus Kefersteinia RCHB.f.. 525-555 ©Naturhistorisches Museum Wien, download unter www.biologiezentrum.at Ann. Naturhist. Mus. Wien 103 B 525 - 555 Wien, Dezember 2001 Contributions to a reassessment of Costa Rican Zygopetalinae (Orchidaceae). The genus Kefersteinia RcHB.f. Franco Pupulin* Abstract A revision of the Costa Rican species pertaining to the genus Kefersteinia RcHB.f. is presented. Phylo- genetic relationships of the genus are discussed. Ten species are accepted for Costa Rica and a key to the species is provided, together with references to the types and synonyms, a detailed description, etymology, general distribution and examined specimens in the study area, ecological notes, taxonomic discussion and a composite illustration for each taxon. A new species, Kefersteinia endresii PUPULIN, is described and illu- strated. Lectotypes are selected for Zygopetalum lacteum RcHB.f., Kefersteinia alba SCHLTR., K. micro- charis SCHLTR. and K. parvilabris SCHLTR. Key words: Orchidaceae, Zygopetalinae, Kefersteinia, Kefersteinia endresii, Costa Rica, systematics, taxonomy Introduction Although the Zygopetalinae appear to be a natural group of the Orchidaceae, its divisi- on into several formal subgroups has proven to be difficult. Within the subtribe, delimi- tation of genera is particularly critical in the Chondrorhyncha alliance. Despite the pre- sence in all the genera of the complex of a common variant in the seed type with res- pect to the Maxillaria type (DRESSLER 1981), vegetative and floral characters do not seem to correlate consistently enough to permit the definition of clear generic bounda- ries. -
Redalyc.GENERIC RELATIONSHIPS of ZYGOPETALINAE (ORCHIDACEAE: CYMBIDIEAE): COMBINED MOLECULAR EVIDENCE
Lankesteriana International Journal on Orchidology ISSN: 1409-3871 [email protected] Universidad de Costa Rica Costa Rica WHITTEN, W. MARK; WILLIAMS, NORRIS H.; DRESSLER, ROBERT L.; GERLACH, GÜNTER; PUPULIN, FRANCO GENERIC RELATIONSHIPS OF ZYGOPETALINAE (ORCHIDACEAE: CYMBIDIEAE): COMBINED MOLECULAR EVIDENCE Lankesteriana International Journal on Orchidology, vol. 5, núm. 2, agosto, 2005, pp. 87- 107 Universidad de Costa Rica Cartago, Costa Rica Available in: http://www.redalyc.org/articulo.oa?id=44339808001 How to cite Complete issue Scientific Information System More information about this article Network of Scientific Journals from Latin America, the Caribbean, Spain and Portugal Journal's homepage in redalyc.org Non-profit academic project, developed under the open access initiative LANKESTERIANA 5(2):87-107. 2005. GENERIC RELATIONSHIPS OF ZYGOPETALINAE (ORCHIDACEAE: CYMBIDIEAE): COMBINED MOLECULAR EVIDENCE W. MARK WHITTEN Florida Museum of Natural History, University of Florida, Gainesville, FL 32611-7800, USA NORRIS H. WILLIAMS1 Florida Museum of Natural History, University of Florida, Gainesville, FL 32611-7800, USA ROBERT L. DRESSLER2 Florida Museum of Natural History, University of Florida, Gainesville, FL 32611-7800, USA GÜNTER GERLACH Botanischer Garten München Nymphenburg, Menzinger Str. 65. 80638 München, Germany FRANCO PUPULIN Jardín Botánico Lankester, Universidad de Costa Rica, P.O. Box 1031-7050 Cartago, Costa Rica 1Author for correspondence: orchid@flmnh.ufl.edu 2Missouri Botanical Garden, P.O. Box 299, St. Louis, Missouri 63166-0299, U.S.A. Mailing address: 21305 NW 86th Ave., Micanopy, Florida 32667. ABSTRACT. The phylogenetic relationships of the orchid subtribe Zygopetalinae were evaluated using parsimony analyses of combined DNA sequence data of nuclear ITS 1 and 2 (including the 5.8s region and portions of the flanking 18s and 26s regions) and of the plastid trnL intron plus the trnL-F intergenic spacer and the plastid matK. -
The Orchid Flora of the Colombian Department of Valle Del Cauca Revista Mexicana De Biodiversidad, Vol
Revista Mexicana de Biodiversidad ISSN: 1870-3453 [email protected] Universidad Nacional Autónoma de México México Kolanowska, Marta The orchid flora of the Colombian Department of Valle del Cauca Revista Mexicana de Biodiversidad, vol. 85, núm. 2, 2014, pp. 445-462 Universidad Nacional Autónoma de México Distrito Federal, México Available in: http://www.redalyc.org/articulo.oa?id=42531364003 How to cite Complete issue Scientific Information System More information about this article Network of Scientific Journals from Latin America, the Caribbean, Spain and Portugal Journal's homepage in redalyc.org Non-profit academic project, developed under the open access initiative Revista Mexicana de Biodiversidad 85: 445-462, 2014 Revista Mexicana de Biodiversidad 85: 445-462, 2014 DOI: 10.7550/rmb.32511 DOI: 10.7550/rmb.32511445 The orchid flora of the Colombian Department of Valle del Cauca La orquideoflora del departamento colombiano de Valle del Cauca Marta Kolanowska Department of Plant Taxonomy and Nature Conservation, University of Gdańsk. Wita Stwosza 59, 80-308 Gdańsk, Poland. [email protected] Abstract. The floristic, geographical and ecological analysis of the orchid flora of the department of Valle del Cauca are presented. The study area is located in the southwestern Colombia and it covers about 22 140 km2 of land across 4 physiographic units. All analysis are based on the fieldwork and on the revision of the herbarium material. A list of 572 orchid species occurring in the department of Valle del Cauca is presented. Two species, Arundina graminifolia and Vanilla planifolia, are non-native elements of the studied orchid flora. The greatest species diversity is observed in the montane regions of the study area, especially in wet montane forest. -
Epilist 1.0: a Global Checklist of Vascular Epiphytes
Zurich Open Repository and Archive University of Zurich Main Library Strickhofstrasse 39 CH-8057 Zurich www.zora.uzh.ch Year: 2021 EpiList 1.0: a global checklist of vascular epiphytes Zotz, Gerhard ; Weigelt, Patrick ; Kessler, Michael ; Kreft, Holger ; Taylor, Amanda Abstract: Epiphytes make up roughly 10% of all vascular plant species globally and play important functional roles, especially in tropical forests. However, to date, there is no comprehensive list of vas- cular epiphyte species. Here, we present EpiList 1.0, the first global list of vascular epiphytes based on standardized definitions and taxonomy. We include obligate epiphytes, facultative epiphytes, and hemiepiphytes, as the latter share the vulnerable epiphytic stage as juveniles. Based on 978 references, the checklist includes >31,000 species of 79 plant families. Species names were standardized against World Flora Online for seed plants and against the World Ferns database for lycophytes and ferns. In cases of species missing from these databases, we used other databases (mostly World Checklist of Selected Plant Families). For all species, author names and IDs for World Flora Online entries are provided to facilitate the alignment with other plant databases, and to avoid ambiguities. EpiList 1.0 will be a rich source for synthetic studies in ecology, biogeography, and evolutionary biology as it offers, for the first time, a species‐level overview over all currently known vascular epiphytes. At the same time, the list represents work in progress: species descriptions of epiphytic taxa are ongoing and published life form information in floristic inventories and trait and distribution databases is often incomplete and sometimes evenwrong. -
E29695d2fc942b3642b5dc68ca
ISSN 1409-3871 VOL. 9, No. 1—2 AUGUST 2009 Orchids and orchidology in Central America: 500 years of history CARLOS OSSENBACH INTERNATIONAL JOURNAL ON ORCHIDOLOGY LANKESTERIANA INTERNATIONAL JOURNAL ON ORCHIDOLOGY Copyright © 2009 Lankester Botanical Garden, University of Costa Rica Effective publication date: August 30, 2009 Layout: Jardín Botánico Lankester. Cover: Chichiltic tepetlauxochitl (Laelia speciosa), from Francisco Hernández, Rerum Medicarum Novae Hispaniae Thesaurus, Rome, Jacobus Mascardus, 1628. Printer: Litografía Ediciones Sanabria S.A. Printed copies: 500 Printed in Costa Rica / Impreso en Costa Rica R Lankesteriana / International Journal on Orchidology No. 1 (2001)-- . -- San José, Costa Rica: Editorial Universidad de Costa Rica, 2001-- v. ISSN-1409-3871 1. Botánica - Publicaciones periódicas, 2. Publicaciones periódicas costarricenses LANKESTERIANA i TABLE OF CONTENTS Introduction 1 Geographical and historical scope of this study 1 Political history of Central America 3 Central America: biodiversity and phytogeography 7 Orchids in the prehispanic period 10 The area of influence of the Chibcha culture 10 The northern region of Central America before the Spanish conquest 11 Orchids in the cultures of Mayas and Aztecs 15 The history of Vanilla 16 From the Codex Badianus to Carl von Linné 26 The Codex Badianus 26 The expedition of Francisco Hernández to New Spain (1570-1577) 26 A new dark age 28 The “English American” — the journey through Mexico and Central America of Thomas Gage (1625-1637) 31 The renaissance of science -
Generic Relationships of Zygopetalinae (Orchidaceae: Cymbidieae): Combined Molecular Evidence
LANKESTERIANA 5(2):87-107. 2005. GENERIC RELATIONSHIPS OF ZYGOPETALINAE (ORCHIDACEAE: CYMBIDIEAE): COMBINED MOLECULAR EVIDENCE W. MARK WHITTEN Florida Museum of Natural History, University of Florida, Gainesville, FL 32611-7800, USA NORRIS H. WILLIAMS1 Florida Museum of Natural History, University of Florida, Gainesville, FL 32611-7800, USA ROBERT L. DRESSLER2 Florida Museum of Natural History, University of Florida, Gainesville, FL 32611-7800, USA GÜNTER GERLACH Botanischer Garten München Nymphenburg, Menzinger Str. 65. 80638 München, Germany FRANCO PUPULIN Jardín Botánico Lankester, Universidad de Costa Rica, P.O. Box 1031-7050 Cartago, Costa Rica 1Author for correspondence: orchid@flmnh.ufl.edu 2Missouri Botanical Garden, P.O. Box 299, St. Louis, Missouri 63166-0299, U.S.A. Mailing address: 21305 NW 86th Ave., Micanopy, Florida 32667. ABSTRACT. The phylogenetic relationships of the orchid subtribe Zygopetalinae were evaluated using parsimony analyses of combined DNA sequence data of nuclear ITS 1 and 2 (including the 5.8s region and portions of the flanking 18s and 26s regions) and of the plastid trnL intron plus the trnL-F intergenic spacer and the plastid matK. Analyses of the three separate data sets produced highly congruent and moderately supported patterns, so these were combined in a single analysis. Combined analysis of 104 ingroup and two outgroup taxa produced highly resolved cladograms. Zygopetalinae comprises a Zygopetalum grade or clade (pseudobulbs prominent; leaves usually plicate, revolute); a Huntleya grade (pseudobulbs reduced or lacking; leaves conduplicate), including Dichaea, Huntleya, Chaubardia, and the Chondrorhyncha complex, plus Cryptarrhena that is weakly supported as sister to the Huntleya clade; and a Warrea grade. Chondrorhyncha s.l. -
Lepidoptera: Pyraloidea: Crambidae) Inferred from DNA and Morphology 141-204 77 (1): 141 – 204 2019
ZOBODAT - www.zobodat.at Zoologisch-Botanische Datenbank/Zoological-Botanical Database Digitale Literatur/Digital Literature Zeitschrift/Journal: Arthropod Systematics and Phylogeny Jahr/Year: 2019 Band/Volume: 77 Autor(en)/Author(s): Mally Richard, Hayden James E., Neinhuis Christoph, Jordal Bjarte H., Nuss Matthias Artikel/Article: The phylogenetic systematics of Spilomelinae and Pyraustinae (Lepidoptera: Pyraloidea: Crambidae) inferred from DNA and morphology 141-204 77 (1): 141 – 204 2019 © Senckenberg Gesellschaft für Naturforschung, 2019. The phylogenetic systematics of Spilomelinae and Pyraustinae (Lepidoptera: Pyraloidea: Crambidae) inferred from DNA and morphology Richard Mally *, 1, James E. Hayden 2, Christoph Neinhuis 3, Bjarte H. Jordal 1 & Matthias Nuss 4 1 University Museum of Bergen, Natural History Collections, Realfagbygget, Allégaten 41, 5007 Bergen, Norway; Richard Mally [richard. [email protected], [email protected]], Bjarte H. Jordal [[email protected]] — 2 Florida Department of Agriculture and Consumer Ser- vices, Division of Plant Industry, 1911 SW 34th Street, Gainesville, FL 32608 USA; James E. Hayden [[email protected]] — 3 Technische Universität Dresden, Institut für Botanik, 01062 Dresden, Germany; Christoph Neinhuis [[email protected]] — 4 Senckenberg Naturhistorische Sammlungen Dresden, Museum für Tierkunde, Königsbrücker Landstraße 159, 01109 Dresden, Germany; Matthias Nuss [[email protected]] — * Corresponding author Accepted on March 14, 2019. Published online at www.senckenberg.de/arthropod-systematics on May 17, 2019. Published in print on June 03, 2019. Editors in charge: Brian Wiegmann & Klaus-Dieter Klass. Abstract. Spilomelinae and Pyraustinae form a species-rich monophylum of Crambidae (snout moths). Morphological distinction of the two groups has been diffcult in the past, and the morphologically heterogenous Spilomelinae has not been broadly accepted as a natural group due to the lack of convincing apomorphies. -
Smithsonian Plant Collections, Guyana 1995–2004, H
Smithsonian Institution Scholarly Press smithsonian contributions to botany • number 97 Smithsonian Institution Scholarly Press ASmithsonian Chronology Plant of MiddleCollections, Missouri Guyana Plain s 1995–2004,Village H. David Sites Clarke By Craig M. Johnson Carol L. Kelloff, Sara N. Alexander, V. A. Funk,with contributions and H. David by Clarke Stanley A. Ahler, Herbert Haas, and Georges Bonani SERIES PUBLICATIONS OF THE SMITHSONIAN INSTITUTION Emphasis upon publication as a means of “diffusing knowledge” was expressed by the first Secretary of the Smithsonian. In his formal plan for the Institution, Joseph Henry outlined a program that included the following statement: “It is proposed to publish a series of reports, giving an account of the new discoveries in science, and of the changes made from year to year in all branches of knowledge.” This theme of basic research has been adhered to through the years by thousands of titles issued in series publications under the Smithsonian imprint, com- mencing with Smithsonian Contributions to Knowledge in 1848 and continuing with the following active series: Smithsonian Contributions to Anthropology Smithsonian Contributions to Botany Smithsonian Contributions to History and Technology Smithsonian Contributions to the Marine Sciences Smithsonian Contributions to Museum Conservation Smithsonian Contributions to Paleobiology Smithsonian Contributions to Zoology In these series, the Institution publishes small papers and full-scale monographs that report on the research and collections of its various museums and bureaus. The Smithsonian Contributions Series are distributed via mailing lists to libraries, universities, and similar institu- tions throughout the world. Manuscripts submitted for series publication are received by the Smithsonian Institution Scholarly Press from authors with direct affilia- tion with the various Smithsonian museums or bureaus and are subject to peer review and review for compliance with manuscript preparation guidelines. -
Network Scan Data
Selbyana 29(1): 69-86. 2008. THE ORCHID POLLINARIA COLLECTION AT LANKESTER BOTANICAL GARDEN, UNIVERSITY OF COSTA RICA FRANCO PUPULIN* Lankester Botanical Garden, University of Costa Rica. P.O. Box 1031-7050 Cartago, Costa Rica, CA Angel Andreetta Research Center on Andean Orchids, University Alfredo Perez Guerrero, Extension Gualaceo, Ecuador Harvard University Herbaria, Cambridge, MA, USA The Marie Selby Botanical Gardens, Sarasota, FL, USA Email: [email protected] ADAM KARREMANS Lankester Botanical Garden, University of Costa Rica. P.O. Box 1031-7050 Cartago, Costa Rica, CA Angel Andreetta Research Center on Andean Orchids, University Alfredo Perez Guerrero, Extension Gualaceo, Ecuador ABSTRACT. The relevance of pollinaria study in orchid systematics and reproductive biology is summa rized. The Orchid Pollinaria Collection and the associate database of Lankester Botanical Garden, University of Costa Rica, are presented. The collection includes 496 pollinaria, belonging to 312 species in 94 genera, with particular emphasis on Neotropical taxa of the tribe Cymbidieae (Epidendroideae). The associated database includes digital images of the pollinaria and is progressively made available to the general public through EPIDENDRA, the online taxonomic and nomenclatural database of Lankester Botanical Garden. Examples are given of the use of the pollinaria collection by researchers of the Center in a broad range of systematic applications. Key words: Orchid pollinaria, systematic botany, pollination biology, orchid pollinaria collection, -
VOL. 15, No. 2 AUGUST, 2015
ISSN 1409-3871 VOL. 15, No. 2 AUGUST, 2015 Vol 15, No. 2 — August 2015 INTERNATIONAL JOURNAL ON ORCHIDOLOGY INTERNATIONAL JOURNAL ON ORCHIDOLOGY LANKESTERIANA, the Scientific Journal of Jardín Botánico Lankester - Universidad de Costa Rica, is devoted to the publi- LANKESTERIANA cation of original contributions on orchidology, including orchid systematics, ecology, evolution, anatomy, physiology, INTERNATIONAL JOURNAL ON ORCHIDOLOGY history, etc., as well as reviews of books and conferences on these topics. Short communications and commentaries are also accepted, and should be titled as such. The official language ofthe journal is the English (papers are published with a Spanish summary), and works submitted in Spanish will be considerd case by case. Manuscripts are evaluated critically Editor-in-Chief (Director) by two or more external referees. FRANCO PUPULIN LANKESTERIANA is indexed by Thomson Reuters’ Biosis, Scielo, Scopus, Latindex, Scirus, and WZB, it is included in the Universidad de Costa Rica, Costa Rica databases of E-journals, Ebookbrowse, FAO Online Catalogues, CiteBank, Mendeley, WorldCat, Core Electronic Journals [email protected] Library, and Biodiveristy Heritage Library, and in the electronic resources of the Columbia University, the University of Managing Editor Florida, the University of Hamburg, and the Smithsonian Institution, among others. ADAM P. KARREMANS LANKESTERIANA is published periodically in volumes, three times a year - in April, August and December - by the Jardín Universidad de Costa Rica, Costa Rica Botánico Lankester, Universidad de Costa Rica. POSTMASTER: Jardín Botánico Lankester, Universidad de Costa Rica, P.O. [email protected] Box 302-7050 Cartago, Costa Rica, C.A. EDITORIAL OffICE: Jardín Botánico Lankester, Universidad de Costa Rica, P.O.