Quentin H. Gibson 1918–2011
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2009 Riboclub Program
2019 RiboClub Program RNA: 20 Years of Discoveries In Association with the Gairdner Foundation September 22-27 - Hotel Chéribourg, Orford, Québec, Canada Organizing Committee: Allan Jacobson, Robert Singer, Adrian Krainer, Françoise Stutz, Yukihide Tomari, Sandra Wolin, Nehalkumar Thakor (ARRTI co-organizer for western Canada) and the RiboClub. Sunday, September 22, 2019 (Day1) 15:00 – 20:00 Registration / Coffee and cake 17:00 – 17:10 Welcome notes and Announcements Sherif Abou Elela RiboClub organizer and co-founder, Member of the Université de Sherbrooke RNA Group 17:15 – 17:45 Opening Lecture I: RNA Biology: Origins and Reflections Joan Steitz Sterling Professor of Molecular Biophysics and Biochemistry, Yale University First speakers of the RiboClub 1998 17:45 – 18:15 Opening Lecture II: RNA Biology: History of Discoveries Witold Filipowicz Professor of Biochemistry, Friedrich Miescher Institute for Biomedical Research 18:15 – 18:45 Special presentation by the recipient of the RiboClub 2009 life achievement award: Initiating the study of Initiation: Initiating translation initiation: a short history and perspective Nahum Sonenberg, Member of the RiboClub, Gilman Cheney Chair in Biochemistry, McGill University 18:45 – 19:45 Cocktail and social time 19:45 – 19:50 Introduction of members of the community and dignitaries Raymund Wellinger Master of ceremonies, Co-founder of the Université de Sherbrooke RNA group, 19:50 – 19:50 Welcome note Pierre Cossette President, Université de Sherbrooke 19:50 – 20:45 Networking Dinner 20:45 – 20:55 -
Acidic Phospholipids,47, 58 Acidification Steps, 23 Adsorbent, 53
Index acidic phospholipids,47, 58 ATPase, 22, 107 acidification steps, 23 auto-oxidation, 48,49 adsorbent, 53 aequorin, 95 aggregated mitochondria, 23 bacterial cells, 10 alcohols, 49 bacteriorhodopsin (BR), 218,232 alkaline hydrolysis, I bee venom, 121 alkyl esters, 57, 59 binders,53 amide bond, 129 silica gel, 53, 65, 176 amide linkage, 14 silica gel H, 176 amino alcohol, II bioactive phospholipids, 144 amino-group labelling reagents, 121 blanching, 50 aminopeptidase, 17 buoyant density, 16 aminophospholipid, 113, 118 butyl hydroxy toluene (BHT), 49,212 aminophospholipid pump, 119, 140 aminophospholipid translocase, 11 3 amphotericin B (AmB), 107 Cal+ -ATPases, 28, 107 N-(1-deoxyD-fructos-1-yl) AmB, 107 Cal+ -uptake, 27 anchored lipids, 38 campesterol, 104 angular amplitude, 89 calciferol, 78 anilino-8-naphthalene sulfonate (ANS), Candida albicans, 59, 60, 61, 76, 78, 102, 94, 103 104, 108 animal cells, 10 caproic acid, 129, 130 animal tissues, 9 carotenoids, 37 anion transporter, 135 cell debris, 33 anisotropy, 81 , 89, 95, 96, 97, 102, 104, cell disintegrator, 19 105 ceramide, 14, 129, 194 antagonists, 178 ceramide monohexosides ( CMH), 60 antioxidant, 49, 50 cerebroside, 14 apolar lipids, 56, 57, 69 chemical probes,112 arachidonic acid (AA), 144,153, 161 chloroplast, 32, 33 artificial membrane, 83 isolation, 32, 33 ascending chromatography, 54 purification, 33 asymmetric topology, 128 cholesterol, 14, 15,212 asymmetry, 112, 113,119 choline, 7, 9 atebrin, 95 chromatograms, 55 Index 249 chromatographic analyses, 52 ELISA, 146, 148 -
Bioluminescent Properties of Semi-Synthetic Obelin and Aequorin Activated by Coelenterazine Analogues with Modifications of C-2, C-6, and C-8 Substituents
International Journal of Molecular Sciences Article Bioluminescent Properties of Semi-Synthetic Obelin and Aequorin Activated by Coelenterazine Analogues with Modifications of C-2, C-6, and C-8 Substituents 1, 2,3, 1 2, Elena V. Eremeeva y , Tianyu Jiang y , Natalia P. Malikova , Minyong Li * and Eugene S. Vysotski 1,* 1 Photobiology Laboratory, Institute of Biophysics SB RAS, Federal Research Center “Krasnoyarsk Science Center SB RAS”, Krasnoyarsk 660036, Russia; [email protected] (E.V.E.); [email protected] (N.P.M.) 2 Key Laboratory of Chemical Biology (MOE), Department of Medicinal Chemistry, School of Pharmaceutical Sciences, Shandong University, Jinan 250012, China; [email protected] 3 State Key Laboratory of Microbial Technology, Shandong University–Helmholtz Institute of Biotechnology, Shandong University, Qingdao 266237, China * Correspondence: [email protected] (M.L.); [email protected] (E.S.V.); Tel.: +86-531-8838-2076 (M.L.); +7-(391)-249-44-30 (E.S.V.); Fax: +86-531-8838-2076 (M.L.); +7-(391)-290-54-90 (E.S.V.) These authors contributed equally to this work. y Received: 23 June 2020; Accepted: 27 July 2020; Published: 30 July 2020 Abstract: Ca2+-regulated photoproteins responsible for bioluminescence of a variety of marine organisms are single-chain globular proteins within the inner cavity of which the oxygenated coelenterazine, 2-hydroperoxycoelenterazine, is tightly bound. Alongside with native coelenterazine, photoproteins can also use its synthetic analogues as substrates to produce flash-type bioluminescence. However, information on the effect of modifications of various groups of coelenterazine and amino acid environment of the protein active site on the bioluminescent properties of the corresponding semi-synthetic photoproteins is fragmentary and often controversial. -
Bioluminescence Related Publications from JNC Corporation
Bioluminescence related publications since 1985 110) Inouye, S. and Hojo, H. (2018) Revalidation of recombinant aequorin as a light emission standard: Estimation of specific activity of Gaussia luciferase. Biochem. Biophys. Res. Commun. 507: 242-245. 109) Yokawa, S., Suzuki, T., Hayashi, A., Inouye, S., Inoh, Y. and Furuno, T. (2018) Video-rate bioluminescence imaging of degranulation of mast cells attached to the extracellular matrix. Front. Cell Dev. Biol. 6: 74. 108) Inouye, S., Tomabechi, Y., Hosoya, T., Sekine, S. and Shirouzu, M. (2018) Slow luminescence kinetics of semi-synthetic aequorin:expression, purification and structure determination of cf3-aequorin. J. Biochem. 164(3): 247–255. 107) Inouye, S. (2018) Single-step purification of recombinant Gaussia luciferase from serum-containing culture medium of mammalian cells. Protein Expr. Purif. 141: 32-38. 106) Inouye, S. and Sahara-Miura, Y. (2017) A fusion protein of the synthetic IgG-binding domain and aequorin: Expression and purification from E. coli cells and its application. Protein Expr. Purif. 137: 58-63. 105) Suzuki, T., Kanamori, T. and Inouye, S. (2017) Quantitative visualization of synchronized insulin secretion from 3D-cultured cells. Biochem. Biophys. Res. Commun. 486: 886-892. 104) Yokawa, S., Suzuki, T., Inouye, S., Inoh, Y., Suzuki, R., Kanamori, T., Furuno, T. and Hirashima, N. (2017) Visualization of glucagon secretion from pancreatic α cells by bioluminescence video microscopy: Identification of secretion sites in the intercellular contact regions. Biochem. Biophys. Res. Commun. 485: 725-730. 103) Inouye, S. and Suzuki, T. (2016) Protein expression of preferred human codon-optimized Gaussia luciferase genes with an artificial open-reading frame in mammalian and bacterial cells. -
BPS Complete Catalog
BPSCATALOG ENZYMES KITS CELL LINES SCREENING SERVICES INNOVATIVE PRODUCTS TO FUEL YOUR EXPERIMENTS Unique, expert portfolio 2017 OUR MISSION: To provide the highest quality life science products and services worldwide in a timely manner to assist in accelerating drug discovery research and development for the treatment of human diseases. INNOVATION WE CONTINUOUSLY STRIVE TO BE FIRST TO MARKET BY PROVIDING EXPERTISE IN EXPRESSING HIGHLY ACTIVE ENZYMES MULTIPLE ASSAY DETECTION FORMATS HUMAN, MURINE AND MONKEY VERSIONS OF RECOMBINANT PROTEINS BIOTINYLATED VERSIONS OF MANY IMMUNE CHECKPOINT RECEPTORS 1ST AND MOST EXTENSIVE PARP ISOZYME PORTFOLIO 1ST AND MOST EXTENSIVE PDE ISOZYME PORTFOLIO 1ST COMPLETE SUITE OF HDAC AND SIRT ENZYMES 1ST AVAILABLE PARP AND TANKYRASE PROFILING SERVICES 1ST COMMERCIALLY AVAILABLE HISTONE DEMETHYLASES LARGEST OFFERING OF METHYLTRANSFERASES LARGEST OFFERING OF DEMETHYLASES OVER 200 PRODUCTS AND SERVICES EXCLUSIVE TO BPS RELIABILITY BPS IS CITED IN PEER-REVIEWED JOURNALS AND PUBLICATIONS AROUND THE WORLD NATURE GENETICS THE JOURNAL OF BIOLOGICAL CHEMISTRY JOURNAL OF CELL SCIENCE ANALYTICAL BIOCHEMISTRY BBRC NATURE CHEMICAL BIOLOGY ACS MEDICINAL CHEMISTRY LETTERS JOURNAL OF NATURAL PRODUCTS CHEMMEDCHEM MOLECULAR CANCER THERAPEUTICS & MANY MORE TABLE OF CONTENTS ACETYLTRANSFERASE 4 APOPTOSIS 4-5 ANTIBODIES 6-9 BIOTINYLATION 10-11 BROMODOMAINS 12-14 CELL BASED ASSAY KITS 15 CELL LINES 16-17 CELL SURFACE RECEPTORS 18-20 CYTOKINE(S) 21-24 DEACETYLASE(S) 25-27 DEMETHYLASE(S) 28-29 HEAT SHOCK PROTEINS 30 IMMUNOTHERAPY -
Watching Dynamics and Assembly of Spliceosomal
WATCHING DYNAMICS AND ASSEMBLY OF SPLICEOSOMAL COMPLEXES AT SINGLE MOLECULE RESOLUTION A thesis submitted for the degree of DOCTOR OF PHILOSOPHY 2015 CHANDANI MANOJA WARNASOORIYA Section of Virology, Department of Medicine Imperial College London 1 Copyright Declaration The copyright of this thesis rests with the author and is made available under a Creative Commons Attribution Non-Commercial No Derivatives licence. Researchers are free to copy, distribute or transmit the thesis on the condition that they attribute it, that they do not use it for commercial purposes and that they do not alter, transform or build upon it. For any reuse or redistribution, researchers must make clear to others the licence terms of this work. 2 Declaration of Origin I hereby declare that this project was entirely my own work (except the gel images in figures 4.2-4.5 in the chapter 4) and that any additional sources of information have been properly cited. I hereby declare that any internet sources, published and unpublished works from which I have quoted or drawn reference have been referenced fully in the text and in the reference list. I understand that failure to do so will result in failure of this project due to plagiarism. Chapter 3 was in collaboration with Prof. Samuel Butcher and Prof. David Brow at University of Wisconsin-Madison, Wisconsin, USA. The Prp24 full length protein and the truncated protein (234C) were provided by them. Chapter 4 was in collaboration with Prof. Kiyoshi Nagai and his lab members Dr. John Hardin and Yasushi Kondo at LMB Cambridge University, Cambridge, UK. -
Structural and Functional Characterization of the N-Terminal Acetyltransferase Natc
Structural and functional characterization of the N-terminal acetyltransferase NatC Inaugural-Dissertation to obtain the academic degree Doctor rerum naturalium (Dr. rer. nat.) submitted to the Department of Biology, Chemistry, Pharmacy of Freie Universität Berlin by Stephan Grunwald Berlin October 01, 2019 Die vorliegende Arbeit wurde von April 2014 bis Oktober 2019 am Max-Delbrück-Centrum für Molekulare Medizin unter der Anleitung von PROF. DR. OLIVER DAUMKE angefertigt. Erster Gutachter: PROF. DR. OLIVER DAUMKE Zweite Gutachterin: PROF. DR. ANNETTE SCHÜRMANN Disputation am 26. November 2019 iii iv Erklärung Ich versichere, dass ich die von mir vorgelegte Dissertation selbstständig angefertigt, die benutzten Quellen und Hilfsmittel vollständig angegeben und die Stellen der Arbeit – einschließlich Tabellen, Karten und Abbildungen – die anderen Werken im Wortlaut oder dem Sinn nach entnommen sind, in jedem Einzelfall als Entlehnung kenntlich gemacht habe; und dass diese Dissertation keiner anderen Fakultät oder Universität zur Prüfung vorgelegen hat. Berlin, 9. November 2020 Stephan Grunwald v vi Acknowledgement I would like to thank Prof. Oliver Daumke for giving me the opportunity to do the research for this project in his laboratory and for the supervision of this thesis. I would also like to thank Prof. Dr. Annette Schürmann from the German Institute of Human Nutrition (DifE) in Potsdam-Rehbruecke for being my second supervisor. From the Daumke laboratory I would like to especially thank Dr. Manuel Hessenberger, Dr. Stephen Marino and Dr. Tobias Bock-Bierbaum, who gave me helpful advice. I also like to thank the rest of the lab members for helpful discussions. I deeply thank my wife Theresa Grunwald, who always had some helpful suggestions and kept me alive while writing this thesis. -
Platelet-Neutrophil Interaction
PLATELET-NEUTROPHIL INTERACTION: NEUTROPHILS MODULATE PLATELET FUNCTION Richard William FAINT 1992 A thesis submitted to the University of London for the degree of Ph.D The Department of Haematology University College and Middlesex School of Medicine University College London 98 Chenies Mews London WC1E 6HX ProQuest Number: U049250 All rights reserved INFORMATION TO ALL USERS The quality of this reproduction is dependent upon the quality of the copy submitted. In the unlikely event that the author did not send a com plete manuscript and there are missing pages, these will be noted. Also, if material had to be removed, a note will indicate the deletion. uest ProQuest U049250 Published by ProQuest LLC(2017). Copyright of the Dissertation is held by the Author. All rights reserved. This work is protected against unauthorized copying under Title 17, United States C ode Microform Edition © ProQuest LLC. ProQuest LLC. 789 East Eisenhower Parkway P.O. Box 1346 Ann Arbor, Ml 48106- 1346 2 ABSTRACT Platelets are vital for the arrest of bleeding following tissue injury. Neutrophils play an important role in host defence against bacterial infection. In the milieu of the acute inflammatory response both cellular and non-cellular elements may interact to modify behaviour. Evidence suggests that leukocytes may play an active role in the modulation of platelet function. This interaction may be abnormal in certain pathological states. This study examined the effect of purified neutrophils upon both washed platelets and platelet-rich plasma, as well as in whole blood in vitro. Neutrophils were found to alter platelet behaviour by several mechanisms. These included transcellular metabolism of eicosanoids. -
Antibody List
產品編號 產品名稱 PA569955 1110059E24Rik Polyclonal Antibody PA569956 1110059E24Rik Polyclonal Antibody PA570131 1190002N15Rik Polyclonal Antibody 01-1234-42 123count eBeads Counting Beads MA512242 14.3.3 Pan Monoclonal Antibody (CG15) LFMA0074 14-3-3 beta Monoclonal Antibody (60C10) LFPA0077 14-3-3 beta Polyclonal Antibody PA137002 14-3-3 beta Polyclonal Antibody PA14647 14-3-3 beta Polyclonal Antibody PA515477 14-3-3 beta Polyclonal Antibody PA517425 14-3-3 beta Polyclonal Antibody PA522264 14-3-3 beta Polyclonal Antibody PA529689 14-3-3 beta Polyclonal Antibody MA134561 14-3-3 beta/epsilon/zeta Monoclonal Antibody (3C8) MA125492 14-3-3 beta/zeta Monoclonal Antibody (22-IID8B) MA125665 14-3-3 beta/zeta Monoclonal Antibody (4E2) 702477 14-3-3 delta/zeta Antibody (1H9L19), ABfinity Rabbit Monoclonal 711507 14-3-3 delta/zeta Antibody (1HCLC), ABfinity Rabbit Oligoclonal 702241 14-3-3 epsilon Antibody (5H10L5), ABfinity Rabbit Monoclonal 711273 14-3-3 epsilon Antibody (5HCLC), ABfinity Rabbit Oligoclonal PA517104 14-3-3 epsilon Polyclonal Antibody PA528937 14-3-3 epsilon Polyclonal Antibody PA529773 14-3-3 epsilon Polyclonal Antibody PA575298 14-3-3 eta (Lys81) Polyclonal Antibody MA524792 14-3-3 eta Monoclonal Antibody PA528113 14-3-3 eta Polyclonal Antibody PA529774 14-3-3 eta Polyclonal Antibody PA546811 14-3-3 eta Polyclonal Antibody MA116588 14-3-3 gamma Monoclonal Antibody (HS23) MA116587 14-3-3 gamma Monoclonal Antibody (KC21) PA529690 14-3-3 gamma Polyclonal Antibody PA578233 14-3-3 gamma Polyclonal Antibody 510700 14-3-3 Pan Polyclonal -
Crystal Structures of Two Sm Protein Complexes and Their Implications for the Assembly of the Spliceosomal Snrnps
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Elsevier - Publisher Connector Cell, Vol. 96, 375±387, February 5, 1999, Copyright 1999 by Cell Press Crystal Structures of Two Sm Protein Complexes and Their Implications for the Assembly of the Spliceosomal snRNPs Christian Kambach,* Stefan Walke,* Robert Young,*§ RNA±RNA interactions to allow the trans-esterification Johanna M. Avis,*k Eric de la Fortelle,* reactions to occur (Moore et al., 1993; Nilsen, 1994). Veronica A. Raker,² Reinhard LuÈ hrmann,² The snRNPs are named after their RNA components: Jade Li,* and Kiyoshi Nagai*³ the U1, U2, U4/U6, and U5 snRNPs contain U1, U2, U4/ *MRC Laboratory of Molecular Biology U6, and U5 small nuclear RNAs (snRNAs), respectively. Hills Road Their protein components are classified into two groups: Cambridge CB2 2QH specific proteins such as U1A, U1 70K, U2B99, and U2A9, England present only in a particular snRNP, and the core proteins ² Institut fuÈ r Molekularbiologie und Tumorforschung common to U1, U2, U4/U6, and U5 snRNPs (LuÈ hrmann Philipps-UniversitaÈ t Marburg et al., 1990; Nagai and Mattaj, 1994). In the spliceosomal Emil-Mannkopff Strabe2 snRNPs from HeLa cell nuclear extract, seven core pro- D-35037 Marburg teins, referred to as the B/B9,D1,D2,D3,E,F,andG Germany proteins, have been identified. The core proteins are also called the Sm proteins due to their reactivity with autoantibodies of the Sm serotype from patients with Summary systemic lupus erythematosus (Lerner and Steitz, 1979). The Sm proteins form a distinct family characterized The U1, U2, U4/U6, and U5 small nuclear ribonucleo- by a conserved Sm sequence motif in two segments, protein particles (snRNPs) involved in pre-mRNA splic- Sm1 and Sm2, separated by a linker of variable length ing contain seven Sm proteins (B/B9,D1,D2,D3,E,F, (Cooper et al., 1995; Hermann et al., 1995; Se raphin, and G) in common, which assemble around the Sm 1995) (Figure 1A). -
Site-Specific Mutagenesis of the Calcium-Binding Photoprotein
Proc. Natd. Acad. Sci. USA Vol. 83, pp. 8107-8111, November 1986 Biochemistry Site-specific mutagenesis of the calcium-binding photoprotein aequorin (bioluninescence/oxygenase/oligonudeotide-directed mutagenesis/protein modification) FREDERICK I. TsuJI*, SATOSHI INOUYEtt, TOSHIO GOTO§, AND YOSHIYUKI SAKAKIt *Marine Biology Research Division, Scripps Institution of Oceanography, University of California-San Diego, La Jolla, CA 92093, and V. A. Medical Center Brentwood, Los Angeles, CA 90073; tResearch Laboratory for Genetic Information, Kyushu University, Fukuoka 812, Japan; and §Department of Agricultural Chemistry, Faculty of Agriculture, Nagoya University, Nagoya 464, Japan Communicated by Martin D. Kamen, July 21, 1986 ABSTRACT The luminescent protein aequorin from the which amino acid substitutions were made at the three jellyfish Aequoria victoria emits light by an intramolecular Ca2l-binding sites, at the three cysteines, and at histidine in reaction in the presence of a trace amount of Ca2 . In order to the hydrophobic region. understand the mechanism of the reaction, a study of structure-function relationships was undertaken with respect MATERIALS AND METHODS to modifying certain of its amino acid residues. This was done by carrying out oligonudeotide-directed site-specific mutagen- Enzymes and Chemicals. All restriction endonucleases, esis of apoaequorin cDNA and expressing the mutagenized Escherichia coli T4 DNA ligase, Klenow enzyme of DNA cDNA in Escherichia cofi. Amino acid substitutions were made polymerase 1, and T4 polynucleotide kinase were purchased at the three Ca2+-binding sites, the three cysteines, and a from Takara Shuzo (Kyoto, Japan). Tris, 2-mercaptoethanol, histidine in one of the hydrophobic regions. Subsequent assay and isopropyl-,fD-thiogalactopyranoside were obtained from of the modified aequorin showed that the Ca2 -binding sites, Wako Pure Chemicals (Osaka, Japan). -
The Completion of John Bradfield Court and New Studentships: with Grateful Thanks to Darwinians Worldwide
WINTER 2019/20 DarwinianTHE The completion of John Bradfield Court and new studentships: with grateful thanks to Darwinians worldwide A New Portrait John Bradfield Court Nobel Laureate Eric Maskin is interviewed by Andrew Prentice NewS FOR THE DArwin COLLEGE COMMUNITY A Message from Mary Fowler Master Above: even wonderful years ago I followed someone who makes the world better. A wonderful The College’s new portrait Willy Brown as Master of Darwin. As you man, Willy is deeply missed not just here in Darwin, of Mary Fowler at its unveiling, with that of her may know, he died very unexpectedly in in Cambridge and in the UK, but around the world. predecessor Willy Brown August. Much-loved as Master, Willy was He gave his skills and knowledge freely. Fortunate behind. distinguished in labour economics and were those who worked with him, or were taught or industrial relations and a founder of the tutored by him, who experienced his generosity and Low Pay Commission. His work, which friendship. A full tribute to him is on page 10. was characterised by the use of statistics, and careful research, centred around the concept of Now I’m myself in my last year as Master (but S“fairness”. That reflected his own nature, modest, fair, certainly not my last year in Cambridge). September generous, kind, a man of integrity. He was a mediator, saw a ritual – the unveiling of my portrait. Darwin DarwinianTHE 2 members and friends gathered in the Dining Hall where the portrait was waiting, covered. Portraits “A wonderful man, Willy Brown is can be a controversial matter.