Discovery of Green Fluorescent Protein (GFP) (Nobel Lecture)** Osamu Shimomura*
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Acidic Phospholipids,47, 58 Acidification Steps, 23 Adsorbent, 53
Index acidic phospholipids,47, 58 ATPase, 22, 107 acidification steps, 23 auto-oxidation, 48,49 adsorbent, 53 aequorin, 95 aggregated mitochondria, 23 bacterial cells, 10 alcohols, 49 bacteriorhodopsin (BR), 218,232 alkaline hydrolysis, I bee venom, 121 alkyl esters, 57, 59 binders,53 amide bond, 129 silica gel, 53, 65, 176 amide linkage, 14 silica gel H, 176 amino alcohol, II bioactive phospholipids, 144 amino-group labelling reagents, 121 blanching, 50 aminopeptidase, 17 buoyant density, 16 aminophospholipid, 113, 118 butyl hydroxy toluene (BHT), 49,212 aminophospholipid pump, 119, 140 aminophospholipid translocase, 11 3 amphotericin B (AmB), 107 Cal+ -ATPases, 28, 107 N-(1-deoxyD-fructos-1-yl) AmB, 107 Cal+ -uptake, 27 anchored lipids, 38 campesterol, 104 angular amplitude, 89 calciferol, 78 anilino-8-naphthalene sulfonate (ANS), Candida albicans, 59, 60, 61, 76, 78, 102, 94, 103 104, 108 animal cells, 10 caproic acid, 129, 130 animal tissues, 9 carotenoids, 37 anion transporter, 135 cell debris, 33 anisotropy, 81 , 89, 95, 96, 97, 102, 104, cell disintegrator, 19 105 ceramide, 14, 129, 194 antagonists, 178 ceramide monohexosides ( CMH), 60 antioxidant, 49, 50 cerebroside, 14 apolar lipids, 56, 57, 69 chemical probes,112 arachidonic acid (AA), 144,153, 161 chloroplast, 32, 33 artificial membrane, 83 isolation, 32, 33 ascending chromatography, 54 purification, 33 asymmetric topology, 128 cholesterol, 14, 15,212 asymmetry, 112, 113,119 choline, 7, 9 atebrin, 95 chromatograms, 55 Index 249 chromatographic analyses, 52 ELISA, 146, 148 -
Section 2 Contribution of Science and Technology to Global Issues
Chapter 1 Progress in Science and Technology and Socioeconomic Changes Section 2 Contribution of Science and Technology to Global Issues From the end of the 19th century to the 20th century, science and technology has rapidly advanced. Chemical industry, electrical industry and heavy industry and so on emerged and we have advanced forward to ages of mass production and mass consumption, when goods could be transported in bulk to distant locations for a short period, as physical distribution, including railways, cars and airplanes, developed. This accompanied the mass disposal of goods and mass consumption of energy, highlighting the Chapter 1 risk of depletion of limited resources, global warming, the destruction of ecosystems and the crisis in the global environment. Science and technology that changed our lives were explained in Section 1 of this chapter, but as well as changing our lives in terms of key daily lifestyle elements, science and technology are also crucial to solve global issues such as climate change, natural resource depletion and energy. There are significant expectations as to how science and technology can contribute to solve global issues. This section addresses the social contribution of science and technology in Japan domestically and internationally. 1 Contribution to Global Warming Countermeasures ○ Global warming state Climate changes caused by global warming are Average global surface temperature (land + sea) anomaly one of the most urgent problems which the world faces. The Intergovernmental Panel on Climate Change (IPCC)1, awarded the Nobel Peace Prize Year in 2007, published the Synthesis Report of Fifth Changes in average global sea level Assessment Report in 2014. -
Bioluminescent Properties of Semi-Synthetic Obelin and Aequorin Activated by Coelenterazine Analogues with Modifications of C-2, C-6, and C-8 Substituents
International Journal of Molecular Sciences Article Bioluminescent Properties of Semi-Synthetic Obelin and Aequorin Activated by Coelenterazine Analogues with Modifications of C-2, C-6, and C-8 Substituents 1, 2,3, 1 2, Elena V. Eremeeva y , Tianyu Jiang y , Natalia P. Malikova , Minyong Li * and Eugene S. Vysotski 1,* 1 Photobiology Laboratory, Institute of Biophysics SB RAS, Federal Research Center “Krasnoyarsk Science Center SB RAS”, Krasnoyarsk 660036, Russia; [email protected] (E.V.E.); [email protected] (N.P.M.) 2 Key Laboratory of Chemical Biology (MOE), Department of Medicinal Chemistry, School of Pharmaceutical Sciences, Shandong University, Jinan 250012, China; [email protected] 3 State Key Laboratory of Microbial Technology, Shandong University–Helmholtz Institute of Biotechnology, Shandong University, Qingdao 266237, China * Correspondence: [email protected] (M.L.); [email protected] (E.S.V.); Tel.: +86-531-8838-2076 (M.L.); +7-(391)-249-44-30 (E.S.V.); Fax: +86-531-8838-2076 (M.L.); +7-(391)-290-54-90 (E.S.V.) These authors contributed equally to this work. y Received: 23 June 2020; Accepted: 27 July 2020; Published: 30 July 2020 Abstract: Ca2+-regulated photoproteins responsible for bioluminescence of a variety of marine organisms are single-chain globular proteins within the inner cavity of which the oxygenated coelenterazine, 2-hydroperoxycoelenterazine, is tightly bound. Alongside with native coelenterazine, photoproteins can also use its synthetic analogues as substrates to produce flash-type bioluminescence. However, information on the effect of modifications of various groups of coelenterazine and amino acid environment of the protein active site on the bioluminescent properties of the corresponding semi-synthetic photoproteins is fragmentary and often controversial. -
Passport to an International Career -True Globalism
Passport to an international career̶True globalism ● Maki KAWAI Professor at Graduate School of Frontier Sciences, The University of Tokyo; RIKEN The Nobel Prize in Chemistry 2010 was awarded jointly to United States, it is rare for one to earn one’s Ph.D. in the United Richard F. Heck, Akira Suzuki, and Ei-ichi Negishi for their con- States like Ei-ichi Negishi. Satoru Masamune left Japan to study tributions to the development of organic synthesis that is also at the University of California, Berkley in 1957 as a Fulbright important industrially. Since palladium-catalyzed cross coupling scholar, and later became professor at Massachusetts Institute of is an area in which Japan is strong and for which it had been Technology (MIT) nurturing many organic scientists. Hiroaki widely expected that someday someone would receive the award, Suga of the Department of Chemistry, School of Science, The I honor the three winners and at the same time appreciate having University of Tokyo, and Yukishige Ito of RIKEN, who is pres- the opportunity to learn of the achievements made by many ently working on glycotrilogy at Exploratory Research for researchers engaged in this area of study. It is well known that Advanced Technology (ERATO), have both studied at MIT’s many of the Nobel Prize winners pursue their research work in Masamune Laboratory. Kazuo Nakamoto (Professor Emeritus at the United States, and Japanese winners are no exception. Marquette University in the United States, deceased June 2011) Among the fifteen winners up to 2010, the five winners of Ei-ichi of infrared or Raman spectroscopies left for the United States in Negishi (Nobel Prize in Chemistry 2010), Osamu Shimomura 1958, and is famous for his editions of“ Infrared and Raman Spec- (Nobel Prize in Chemistry 2008), Yoichiro Nambu (Nobel Prize tra of Inorganic and Coordination Compounds,” with which I am in Physics 2008), Susumu Tonegawa (Nobel Prize in Physiology sure many of you are familiar. -
William Mcelroy
NATIONAL ACADEMY OF SCIENCES WILLIAM DAVID MC ELROY 1917–1999 A Biographical Memoir by J. WOODLAND HASTINGS Any opinions expressed in this memoir are those of the author and do not necessarily reflect the views of the National Academy of Sciences. Biographical Memoirs, VOLUME 85 PUBLISHED 2004 BY THE NATIONAL ACADEMIES PRESS WASHINGTON, D.C. Photo by Anthony di Gesu, La Jolla, California WILLIAM DAVID MC ELROY January 22, 1917–February 17, 1999 BY J. WOODLAND HASTINGS ILLIAM DAVID MCELROY, a biologist who made ground- Wbreaking discoveries in bioluminescence and was an administrator of great talent, died of respiratory failure at Scripps Memorial Hospital in San Diego, California, at the age of 82. He was an innovative and internationally promi- nent scientist and administrator, with a continuing agenda for experimental projects and research support for all areas of science, both basic and applied. At the time of his death McElroy was a professor emeritus at the University of California, San Diego, having served as its chancellor from 1972 to 1980. He was on the faculty at the Johns Hopkins University, where from 1946 until 1969 he was the founding director of the McCollum-Pratt Institute, and from 1956 to 1969 the chairman of the biology depart- ment. He was a member of many professional scientific societies and served as president of several, including three of the largest: the American Society of Biological Chemists, the American Institute of Biological Sciences, and the 116,000- member American Association for the Advancement of Science. He served on the President’s Science Advisory Committee under both Kennedy and Johnson (1962-1966), was elected to the National Academy of Sciences in 1963, was director of the National Science Foundation under Nixon 3 4 BIOGRAPHICAL MEMOIRS (1969-1972), and was a member of the President’s Committee on the National Medal of Science Award (1972). -
The Nakanishi Symposium on Natural Products & Bioorganic Chemistry
The Nakanishi Symposium on Natural Products & Bioorganic Chemistry March 19, 2021 Sponsored by The Chemical Society of Japan & The American Chemical Society ー1ー Yoshito Kishi Professor Emeritus, Harvard University ■EDUCATION Bachelor of Science, Nagoya University 1961 Doctor of Philosophy (Chemistry), Nagoya University (Professors Yoshimasa Hirata and Toshio Goto) 1966 Postdoctoral Research Fellow (Chemistry), Harvard University (Professor R. B. Woodward) 1966-1968 ■ACADEMIC APPOINTMENT Instructor of Chemistry, Nagoya University 1966-1970 Associate Professor of Agricultural Chemistry, Nagoya University 1970-1974 Visiting Professor of Chemistry, Harvard University 1972-1973 Professor of Chemistry, Harvard University 1974-1982 Morris Loeb Professor of Chemistry, Harvard University 1982-2002 Morris Loeb Professor of Chemistry, Emeritus, Harvard University 2002- ー2ー ■RESEARCH TOPICS (chronological order) 1. Chemical studies of bioluminescence: The luminescent substance named luciferin is an unstable compound, making its structural determination extremely difficult. Dr. Kishi, however, determined the structures of luciferins, such as those in Cypridina, Genji fireflies, krill, dinoflagellates, and the luminous shellfish of Latia (1960s–1980s). 2. Total synthesis of complex natural products: The pufferfish toxin tetrodotoxin, the structure of which was determined in 1964, is still known as one of the most difficult natural products to synthesize due to its highly functionalized structural complexity. Dr. Kishi achieved the world’s first total synthesis of this compound in 1972. Later, he achieved total synthesis of the paralytic shellfish toxin saxitoxin, the anticancer drug mitomycin C, the fungus toxin sporidesmin, and the β-lactam antibiotics (1970s–1980s). 3. Development of acyclic stereocontrol in total synthesis of natural products: Until the early 1970s, total synthesis of polyether antibiotics was almost impossible due to the presence of numerous asymmetric centers. -
Bioluminescence Is Produced by a Firefly-Like Luciferase but an Entirely
www.nature.com/scientificreports OPEN New Zealand glowworm (Arachnocampa luminosa) bioluminescence is produced by a Received: 8 November 2017 Accepted: 1 February 2018 frefy-like luciferase but an entirely Published: xx xx xxxx new luciferin Oliver C. Watkins1,2, Miriam L. Sharpe 1, Nigel B. Perry 2 & Kurt L. Krause 1 The New Zealand glowworm, Arachnocampa luminosa, is well-known for displays of blue-green bioluminescence, but details of its bioluminescent chemistry have been elusive. The glowworm is evolutionarily distant from other bioluminescent creatures studied in detail, including the frefy. We have isolated and characterised the molecular components of the glowworm luciferase-luciferin system using chromatography, mass spectrometry and 1H NMR spectroscopy. The purifed luciferase enzyme is in the same protein family as frefy luciferase (31% sequence identity). However, the luciferin substrate of this enzyme is produced from xanthurenic acid and tyrosine, and is entirely diferent to that of the frefy and known luciferins of other glowing creatures. A candidate luciferin structure is proposed, which needs to be confrmed by chemical synthesis and bioluminescence assays. These fndings show that luciferases can evolve independently from the same family of enzymes to produce light using structurally diferent luciferins. Glowworms are found in New Zealand and Australia, and are a major tourist attraction at sites located across both countries. In contrast to luminescent beetles such as the frefy (Coleoptera), whose bioluminescence has been well characterised (reviewed by ref.1), the molecular details of glowworm bioluminescence have remained elusive. Tese glowworms are the larvae of fungus gnats of the genus Arachnocampa, with eight species endemic to Australia and a single species found only in New Zealand2. -
Understanding Bioluminescence in Dinoflagellates—How Far Have We Come?
Microorganisms 2013, 1, 3-25; doi:10.3390/microorganisms1010003 OPEN ACCESS microorganisms ISSN 2076-2607 www.mdpi.com/journal/microorganisms Review Understanding Bioluminescence in Dinoflagellates—How Far Have We Come? Martha Valiadi 1,* and Debora Iglesias-Rodriguez 2 1 Department of Evolutionary Ecology, Max Planck Institute for Evolutionary Biology, August-Thienemann-Strasse, Plӧn 24306, Germany 2 Department of Ecology, Evolution and Marine Biology, University of California Santa Barbara, Santa Barbara, CA 93106, USA; E-Mail: [email protected] * Author to whom correspondence should be addressed; E-Mail: [email protected] or [email protected]; Tel.: +49-4522-763277; Fax: +49-4522-763310. Received: 3 May 2013; in revised form: 20 August 2013 / Accepted: 24 August 2013 / Published: 5 September 2013 Abstract: Some dinoflagellates possess the remarkable genetic, biochemical, and cellular machinery to produce bioluminescence. Bioluminescent species appear to be ubiquitous in surface waters globally and include numerous cosmopolitan and harmful taxa. Nevertheless, bioluminescence remains an enigmatic topic in biology, particularly with regard to the organisms’ lifestyle. In this paper, we review the literature on the cellular mechanisms, molecular evolution, diversity, and ecology of bioluminescence in dinoflagellates, highlighting significant discoveries of the last quarter of a century. We identify significant gaps in our knowledge and conflicting information and propose some important research questions -
Bioluminescence Related Publications from JNC Corporation
Bioluminescence related publications since 1985 110) Inouye, S. and Hojo, H. (2018) Revalidation of recombinant aequorin as a light emission standard: Estimation of specific activity of Gaussia luciferase. Biochem. Biophys. Res. Commun. 507: 242-245. 109) Yokawa, S., Suzuki, T., Hayashi, A., Inouye, S., Inoh, Y. and Furuno, T. (2018) Video-rate bioluminescence imaging of degranulation of mast cells attached to the extracellular matrix. Front. Cell Dev. Biol. 6: 74. 108) Inouye, S., Tomabechi, Y., Hosoya, T., Sekine, S. and Shirouzu, M. (2018) Slow luminescence kinetics of semi-synthetic aequorin:expression, purification and structure determination of cf3-aequorin. J. Biochem. 164(3): 247–255. 107) Inouye, S. (2018) Single-step purification of recombinant Gaussia luciferase from serum-containing culture medium of mammalian cells. Protein Expr. Purif. 141: 32-38. 106) Inouye, S. and Sahara-Miura, Y. (2017) A fusion protein of the synthetic IgG-binding domain and aequorin: Expression and purification from E. coli cells and its application. Protein Expr. Purif. 137: 58-63. 105) Suzuki, T., Kanamori, T. and Inouye, S. (2017) Quantitative visualization of synchronized insulin secretion from 3D-cultured cells. Biochem. Biophys. Res. Commun. 486: 886-892. 104) Yokawa, S., Suzuki, T., Inouye, S., Inoh, Y., Suzuki, R., Kanamori, T., Furuno, T. and Hirashima, N. (2017) Visualization of glucagon secretion from pancreatic α cells by bioluminescence video microscopy: Identification of secretion sites in the intercellular contact regions. Biochem. Biophys. Res. Commun. 485: 725-730. 103) Inouye, S. and Suzuki, T. (2016) Protein expression of preferred human codon-optimized Gaussia luciferase genes with an artificial open-reading frame in mammalian and bacterial cells. -
BPS Complete Catalog
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The 2009 Lindau Nobel Laureate Meeting: Roger Y. Tsien, Chemistry 2008
Journal of Visualized Experiments www.jove.com Video Article The 2009 Lindau Nobel Laureate Meeting: Roger Y. Tsien, Chemistry 2008 Roger Y. Tsien1 1 URL: https://www.jove.com/video/1575 DOI: doi:10.3791/1575 Keywords: Cellular Biology, Issue 35, GFP, Green Fluorescent Protein, IFPs, jellyfish, PKA, Calmodulin Date Published: 1/13/2010 Citation: Tsien, R.Y. The 2009 Lindau Nobel Laureate Meeting: Roger Y. Tsien, Chemistry 2008. J. Vis. Exp. (35), e1575, doi:10.3791/1575 (2010). Abstract American biochemist Roger Tsien shared the 2008 Nobel Prize in Chemistry with Martin Chalfie and Osamu Shimomura for their discovery and development of the Green Fluorescent Protein (GFP). Tsien, who was born in New York in 1952 and grew up in Livingston New Jersey, began to experiment in the basement of the family home at a young age. From growing silica gardens of colorful crystallized metal salts to attempting to synthesize aspirin, these early experiments fueled what would become Tsien's lifelong interest in chemistry and colors. Tsien's first official laboratory experience was an NSF-supported summer research program in which he used infrared spectroscopy to examine how metals bind to thiocyanate, for which he was awarded a $10,000 scholarship in the Westinghouse Science Talent Search. Following graduation from Harvard in 1972, Tsien attended Cambridge University in England under a Marshall Scholarship. There he learned organic chemistry --a subject he'd hated as an undergraduate-- and looked for a way to synthesize dyes for imaging neuronal activity, generating BAPTA based optical calcium indicator dyes. Following the completion of his postdoctoral training at Cambridge in 1982, Tsien accepted a faculty position at the University of California, Berkeley. -
Nagoya University PROFILE 2011-2012
Nagoya University Profile 2011–2012 Furo-cho, Chikusa-ku, Nagoya, 464-8601, Japan Phone: +81-52-789-2044 http://www.nagoya-u.ac.jp/en/ Profile 2011–2012 Table of Contents 02 Greeting from the President 03 The Hamaguchi Plan 04 Excellence in Research Fostered by a Free and Vibrant Academic Culture 19 Nurturing Future Global Leaders 30 International Cooperation 34 Nagoya University's Global Network 42 Nagoya University Outline Greeting from the President Dr. Michinari HAMAGUCHI President The Hamaguchi Plan As the President of Nagoya University, I offer you my most Nagoya University sincere greetings. I feel the magnitude of responsibility of this Education, Research, Transforming Nagoya University Administration and Finance office, which I assumed in April 2009. and Social Contribution to a World Class Institution Throughout its history, Nagoya University has done its utmost to Cultivation of Globally Effective Leaders Making Administrative and Support Functions 1. Cultivation of Globally Effective Leaders maintain a free and vibrant academic culture. As an educational • Improving the core curriculum : Strengthening More Efficient to Enable Effective Education the Institute of Liberal Arts and Sciences and Through our core curriculum, Global 30 Project, and Research institution, we aim to cultivate what we call “courageous improving learning support systems and the increase in international students to • Evaluating and reorganizing functions to ensure over 2,000 within 5 years intellectuals”: social contributors endowed with the powers of