Lycopodiella Inundata
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Untangling Phylogenetic Patterns and Taxonomic Confusion in Tribe Caryophylleae (Caryophyllaceae) with Special Focus on Generic
TAXON 67 (1) • February 2018: 83–112 Madhani & al. • Phylogeny and taxonomy of Caryophylleae (Caryophyllaceae) Untangling phylogenetic patterns and taxonomic confusion in tribe Caryophylleae (Caryophyllaceae) with special focus on generic boundaries Hossein Madhani,1 Richard Rabeler,2 Atefeh Pirani,3 Bengt Oxelman,4 Guenther Heubl5 & Shahin Zarre1 1 Department of Plant Science, Center of Excellence in Phylogeny of Living Organisms, School of Biology, College of Science, University of Tehran, P.O. Box 14155-6455, Tehran, Iran 2 University of Michigan Herbarium-EEB, 3600 Varsity Drive, Ann Arbor, Michigan 48108-2228, U.S.A. 3 Department of Biology, Faculty of Sciences, Ferdowsi University of Mashhad, P.O. Box 91775-1436, Mashhad, Iran 4 Department of Biological and Environmental Sciences, University of Gothenburg, Box 461, 40530 Göteborg, Sweden 5 Biodiversity Research – Systematic Botany, Department of Biology I, Ludwig-Maximilians-Universität München, Menzinger Str. 67, 80638 München, Germany; and GeoBio Center LMU Author for correspondence: Shahin Zarre, [email protected] DOI https://doi.org/10.12705/671.6 Abstract Assigning correct names to taxa is a challenging goal in the taxonomy of many groups within the Caryophyllaceae. This challenge is most serious in tribe Caryophylleae since the supposed genera seem to be highly artificial, and the available morphological evidence cannot effectively be used for delimitation and exact determination of taxa. The main goal of the present study was to re-assess the monophyly of the genera currently recognized in this tribe using molecular phylogenetic data. We used the sequences of nuclear ribosomal internal transcribed spacer (ITS) and the chloroplast gene rps16 for 135 and 94 accessions, respectively, representing all 16 genera currently recognized in the tribe Caryophylleae, with a rich sampling of Gypsophila as one of the most heterogeneous groups in the tribe. -
Miniaturized Mitogenome of the Parasitic Plant Viscum
Miniaturized mitogenome of the parasitic plant PNAS PLUS Viscum scurruloideum is extremely divergent and dynamic and has lost all nad genes Elizabeth Skippingtona, Todd J. Barkmanb, Danny W. Ricea, and Jeffrey D. Palmera,1 aDepartment of Biology, Indiana University, Bloomington, IN 47405; and bDepartment of Biological Sciences, Western Michigan University, Kalamazoo, MI 49008 Edited by David M. Hillis, The University of Texas at Austin, Austin, TX, and approved June 1, 2015 (received for review March 5, 2015) Despite the enormous diversity among parasitic angiosperms in revealed that host-to-parasite HGT has been frequent in Raf- form and structure, life-history strategies, and plastid genomes, flesiaceae mitogenomes, which otherwise are relatively unremark- little is known about the diversity of their mitogenomes. We able with respect to gene content and sequence divergence (8). report the sequence of the wonderfully bizarre mitogenome of Depending on the Rafflesiaceae species, 24–41% of protein genes the hemiparasitic aerial mistletoe Viscum scurruloideum. This ge- are inferred to have been acquired by HGT. The repetitive nature nome is only 66 kb in size, making it the smallest known angio- of Rafflesiaceae mtDNAs and the short reads used in these studies sperm mitogenome by a factor of more than three and the rendered assembly of complete genome sequences impractical, smallest land plant mitogenome. Accompanying this size reduc- but with a minimum size of 320 kb, the Rafflesia lagascae mito- tion is exceptional reduction of gene content. Much of this reduc- genome (4) falls within the known angiosperm size range (0.2– tion arises from the unexpected loss of respiratory complex I 11.3 Mb) (9, 10). -
Checklist of the Vascular Plants of Redwood National Park
Humboldt State University Digital Commons @ Humboldt State University Botanical Studies Open Educational Resources and Data 9-17-2018 Checklist of the Vascular Plants of Redwood National Park James P. Smith Jr Humboldt State University, [email protected] Follow this and additional works at: https://digitalcommons.humboldt.edu/botany_jps Part of the Botany Commons Recommended Citation Smith, James P. Jr, "Checklist of the Vascular Plants of Redwood National Park" (2018). Botanical Studies. 85. https://digitalcommons.humboldt.edu/botany_jps/85 This Flora of Northwest California-Checklists of Local Sites is brought to you for free and open access by the Open Educational Resources and Data at Digital Commons @ Humboldt State University. It has been accepted for inclusion in Botanical Studies by an authorized administrator of Digital Commons @ Humboldt State University. For more information, please contact [email protected]. A CHECKLIST OF THE VASCULAR PLANTS OF THE REDWOOD NATIONAL & STATE PARKS James P. Smith, Jr. Professor Emeritus of Botany Department of Biological Sciences Humboldt State Univerity Arcata, California 14 September 2018 The Redwood National and State Parks are located in Del Norte and Humboldt counties in coastal northwestern California. The national park was F E R N S established in 1968. In 1994, a cooperative agreement with the California Department of Parks and Recreation added Del Norte Coast, Prairie Creek, Athyriaceae – Lady Fern Family and Jedediah Smith Redwoods state parks to form a single administrative Athyrium filix-femina var. cyclosporum • northwestern lady fern unit. Together they comprise about 133,000 acres (540 km2), including 37 miles of coast line. Almost half of the remaining old growth redwood forests Blechnaceae – Deer Fern Family are protected in these four parks. -
Pinery Provincial Park Vascular Plant List Flowering Latin Name Common Name Community Date
Pinery Provincial Park Vascular Plant List Flowering Latin Name Common Name Community Date EQUISETACEAE HORSETAIL FAMILY Equisetum arvense L. Field Horsetail FF Equisetum fluviatile L. Water Horsetail LRB Equisetum hyemale L. ssp. affine (Engelm.) Stone Common Scouring-rush BS Equisetum laevigatum A. Braun Smooth Scouring-rush WM Equisetum variegatum Scheich. ex Fried. ssp. Small Horsetail LRB Variegatum DENNSTAEDIACEAE BRACKEN FAMILY Pteridium aquilinum (L.) Kuhn Bracken-Fern COF DRYOPTERIDACEAE TRUE FERN FAMILILY Athyrium filix-femina (L.) Roth ssp. angustum (Willd.) Northeastern Lady Fern FF Clausen Cystopteris bulbifera (L.) Bernh. Bulblet Fern FF Dryopteris carthusiana (Villars) H.P. Fuchs Spinulose Woodfern FF Matteuccia struthiopteris (L.) Tod. Ostrich Fern FF Onoclea sensibilis L. Sensitive Fern FF Polystichum acrostichoides (Michaux) Schott Christmas Fern FF ADDER’S-TONGUE- OPHIOGLOSSACEAE FERN FAMILY Botrychium virginianum (L.) Sw. Rattlesnake Fern FF FLOWERING FERN OSMUNDACEAE FAMILY Osmunda regalis L. Royal Fern WM POLYPODIACEAE POLYPODY FAMILY Polypodium virginianum L. Rock Polypody FF MAIDENHAIR FERN PTERIDACEAE FAMILY Adiantum pedatum L. ssp. pedatum Northern Maidenhair Fern FF THELYPTERIDACEAE MARSH FERN FAMILY Thelypteris palustris (Salisb.) Schott Marsh Fern WM LYCOPODIACEAE CLUB MOSS FAMILY Lycopodium lucidulum Michaux Shining Clubmoss OF Lycopodium tristachyum Pursh Ground-cedar COF SELAGINELLACEAE SPIKEMOSS FAMILY Selaginella apoda (L.) Fern. Spikemoss LRB CUPRESSACEAE CYPRESS FAMILY Juniperus communis L. Common Juniper Jun-E DS Juniperus virginiana L. Red Cedar Jun-E SD Thuja occidentalis L. White Cedar LRB PINACEAE PINE FAMILY Larix laricina (Duroi) K. Koch Tamarack Jun LRB Pinus banksiana Lambert Jack Pine COF Pinus resinosa Sol. ex Aiton Red Pine Jun-M CF Pinery Provincial Park Vascular Plant List 1 Pinery Provincial Park Vascular Plant List Flowering Latin Name Common Name Community Date Pinus strobus L. -
Long-Read Transcriptome and Other Genomic Resources for the Angiosperm Silene Noctiflora
bioRxiv preprint doi: https://doi.org/10.1101/2020.08.09.243378; this version posted August 10, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. Long-read transcriptome and other genomic resources for the angiosperm Silene noctiflora Alissa M. Williams,*,1 Michael W. Itgen,* Amanda K. Broz,* Olivia G. Carter,* Daniel B. Sloan* *Department of Biology, Colorado State University, Fort Collins, Colorado 80523 1Corresponding author: [email protected] bioRxiv preprint doi: https://doi.org/10.1101/2020.08.09.243378; this version posted August 10, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. 1 Abstract 2 3 The angiosperm genus Silene is a model system for several traits of ecological and evolutionary 4 significance in plants, including breeding system and sex chromosome evolution, host-pathogen 5 interactions, invasive species biology, heavy metal tolerance, and cytonuclear interactions. 6 Despite its importance, genomic resources for this large genus of approximately 850 species are 7 scarce, with only one published whole-genome sequence (from the dioecious species S. latifolia). 8 Here, we provide genomic and transcriptomic resources for a hermaphroditic representative of 9 this genus (S. noctiflora), including a PacBio Iso-Seq transcriptome, which uses long-read, 10 single-molecule sequencing technology to analyze full-length mRNA transcripts and identify 11 paralogous genes and alternatively spliced genes. -
Flowering Plants of South Norwood Country Park
Flowering Plants Of South Norwood Country Park Robert Spencer Introduction South Norwood Country Park relative to its size contains a wide range habitats and as a result a diverse range of plants can be found growing on site. Some of these plants are very conspicuous, growing in great abundance and filling the park with splashes of bright colour with a white period in early May largely as a result of the Cow Parsley, this is followed later in the year by a pink period consisting of mainly Willow herbs. Other plants to be observed are common easily recognisable flowers. However there are a great number of plants growing at South Norwood Country Park that are less well-known or harder to spot, and the casual observer would likely be surprised to learn that 363 species of flowering plants have so far been recorded growing in the park though this number includes invasive species and garden escapes. This report is an update of a report made in 2006, and though the site has changed in the intervening years the management and fundamental nature of the park remains the same. Some plants have diminished and some have flourished and the high level of diversity is still present. Many of these plants are important to other wildlife particularly in their relationship to invertebrate pollinators, and some of these important interactions are referenced in this report. With so many species on the plant list there is a restriction on how much information is given for each species, with some particularly rare or previously observed but now absent plants not included though they appear in the index at the back of the report including when they were last observed. -
Baja California, Mexico, and a Vegetation Map of Colonet Mesa Alan B
Aliso: A Journal of Systematic and Evolutionary Botany Volume 29 | Issue 1 Article 4 2011 Plants of the Colonet Region, Baja California, Mexico, and a Vegetation Map of Colonet Mesa Alan B. Harper Terra Peninsular, Coronado, California Sula Vanderplank Rancho Santa Ana Botanic Garden, Claremont, California Mark Dodero Recon Environmental Inc., San Diego, California Sergio Mata Terra Peninsular, Coronado, California Jorge Ochoa Long Beach City College, Long Beach, California Follow this and additional works at: http://scholarship.claremont.edu/aliso Part of the Biodiversity Commons, Botany Commons, and the Ecology and Evolutionary Biology Commons Recommended Citation Harper, Alan B.; Vanderplank, Sula; Dodero, Mark; Mata, Sergio; and Ochoa, Jorge (2011) "Plants of the Colonet Region, Baja California, Mexico, and a Vegetation Map of Colonet Mesa," Aliso: A Journal of Systematic and Evolutionary Botany: Vol. 29: Iss. 1, Article 4. Available at: http://scholarship.claremont.edu/aliso/vol29/iss1/4 Aliso, 29(1), pp. 25–42 ’ 2011, Rancho Santa Ana Botanic Garden PLANTS OF THE COLONET REGION, BAJA CALIFORNIA, MEXICO, AND A VEGETATION MAPOF COLONET MESA ALAN B. HARPER,1 SULA VANDERPLANK,2 MARK DODERO,3 SERGIO MATA,1 AND JORGE OCHOA4 1Terra Peninsular, A.C., PMB 189003, Suite 88, Coronado, California 92178, USA ([email protected]); 2Rancho Santa Ana Botanic Garden, 1500 North College Avenue, Claremont, California 91711, USA; 3Recon Environmental Inc., 1927 Fifth Avenue, San Diego, California 92101, USA; 4Long Beach City College, 1305 East Pacific Coast Highway, Long Beach, California 90806, USA ABSTRACT The Colonet region is located at the southern end of the California Floristic Province, in an area known to have the highest plant diversity in Baja California. -
BSBI News Back Panel of Referees and Specialists Catalogue with Google
CONTENTS Notes from the Receiving Editor............. 2 Vascular plant Red Data List: year 5 amendments Editorial..................................................... 3 ................ S.J. Leach & K.J. Walker 51 Marsh Botany Awards.............................. 4 New Flora of RHS Wisley and the Diary.......................................................... 4 host range of Lathraea clandestina Notes..................................................... 5-59 .........................................J. Armitage 57 Alopecurus aequalis at the Great Fen, Honorary membership..........T.G. Evans 59 Huntingdonshire. P. Stroh & M. Burton 5 Aliens.................................................. 60-78 Utricularia bremii in the New Forest Indian Balsam – triffid or treat? ...............................................M. Rand 8 .........................................J. Presland 60 Mire and wet heath restoration and Sedum kamtschaticum var. ellacombianum in management in Burnham Beeches. Johnston (v.c.45)..... S.D.S. Bosanquet 69 ....A.R. Westgarth-Smith, A. McVeigh Epilobium tournefortii...........M. Wilcox 70 .......................................& H.J. Read 10 Red Arum................................A. Galton 11 Focus on Apium leptophyllum Population structure and conservation of Genista .......................................E.J. Clement 76 anglica.....................................P.A. Vaughan 12 No future for Prunus mahaleb in Britain? Wild flower twitching.............C. Jacobs 17 .......................................E.J. Clement -
2019-Identification
Carrot Family (Apiaceae) Giant hogweed ● Heracleum mantegazzianum Invasiveness Rank: 81 points Species Code: HEMA17 General Information: Biennial or perennial 3-4.5 m tall Typically die after flowering Description: Stems Hollow Reddish spots Bristles Leaves Compound Inflorescence Umbels up to 75 cm in diameter Flowers small and white Fruits Flat, oval, dry Habitat: damp locations, along rivers and streams, disturbed areas including waste places and roadsides Distribution: Pacific maritime; only one population known in Kake, which appears to have been eradicated. Comparison to native H. maximum: Height Umbel Width Leaves H. mantegazzianum < 4.5 m < 75 cm Compound H. maximum < 1.8 m <30 cm Palmately lobed 115 Touch-me-not Family (Balsaminaceae) Ornamental jewelweed ● Impatiens glandulifera Invasiveness Rank: 82 points Species Code: IMGL General Information: 0.9-1.8 m tall Entire plant has purple or reddish tinge Description: Stems Hollow Leaves Mostly opposite or whorled Serrated margins Petioles with large glands Inflorescence White, pink, red or purple With a 4-5 mm long spur Fruits © 2015 AKNHP b- Dehisce explosively (ripe seeds shoot out when touched) Habitat: riparian areas, wetlands, beach meadows; escapes from gardens Distribution: few sites in the Pacific maritime and interior boreal regions; Kenai, Anchorage, Juneau, Skagway, Haines; in and near Fairbanks and Salcha Touch-me-not ● Impatiens noli-tangere General Information: 0.2-0.8 m tall Smaller than I. glandulifera Description: Stems Watery to fleshy Leaves Alternate Margins coarsely toothed Inflorescence Yellow-orange with brown spots With a 6-10 mm long spur Fruits Dehisce explosively Habitat: moist forests and stream banks Distribution: Pacific maritime and interior boreal regions 116 Other Families Key to select common, small, blue-flowered species: 1a. -
Ecological Assessment
ENNOR FARM ISLES OF SCILLY ECOLOGICAL ASSESSMENT January 2021 8128.002 Version 5.0 Document Title Ennor Farm Ecological Assessment Prepared for CampbellReith Prepared by TEP Ltd Document Ref 8128.002 Author Gemma Hassall Date October 2020 Checked Lee Greenhough Approved Lee Greenhough Amendment History Check / Modified Version Date Approved Reason(s) issue Status by by Minor update to reflect design freeze and Final for client 2.0 01/12/2020 RAR LG additional appendix approval Inclusion of CampbellReith Drainage 3.0 16/12/2020 LG RAR Strategy plan (ref 13394-CRH-XX-XX-DR-C- Final 5050-P2 Drainage Strategy) January CampbellReith update of proposed layout 4.0 - - For submission 2021 plan Amendment to reflect additional tree removal Final for 5.0 11/01/2021 RAR LG and replacement required to accommodate Planning Issue visibility splay; phase 1 map correction Ennor Farm St. Mary’s, Isles of Scilly Ecological Assessment Contents Page EXECUTIVE SUMMARY ....................................................................................................... 1 1.0 INTRODUCTION ..................................................................................................... 2 Site Description ....................................................................................................... 2 2.0 METHODS............................................................................................................... 4 Desktop Study ......................................................................................................... 4 Habitat -
An Illustrated Key to the Alberta Figworts & Allies
AN ILLUSTRATED KEY TO THE ALBERTA FIGWORTS & ALLIES OROBANCHACEAE PHRYMACEAE PLANTAGINACEAE SCROPHULARIACEAE Compiled and writen by Lorna Allen & Linda Kershaw April 2019 © Linda J. Kershaw & Lorna Allen Key to Figwort and Allies Families In the past few years, the families Orobanchaceae, Plantaginaceae and Scrophulariaceae have under- gone some major revision and reorganization. Most of the species in the Scrophulariaceae in the Flora of Alberta (1983) are now in the Orobanchaceae and Plantaginaceae. For this reason, we’ve grouped the Orobanchaceae, Plantaginaceae, Phrymaceae and Scrophulariaceae together in this fle. In addition, species previously placed in the Callitrichaceae and Hippuridaceae families are now included in the Plantaginaceae family. 01a Plants aquatic, with many or all leaves submersed and limp when taken from the 1a water; leaves paired or in rings (whorled) on the stem, all or mostly linear (foating leaves sometimes spatula- to egg-shaped); fowers tiny (1-2 mm), single or clustered in leaf axils; petals and sepals absent or sepals fused in a cylinder around the ovary; stamens 0-1 . Plantaginaceae (in part) . - Callitriche, Hippuris 01b Plants emergent wetland species (with upper stems and leaves held above water) or upland species with self-supporting stems and leaves; leaves not as above; fowers larger, single or in clusters; petals and sepals present; stamens 2-4 (Hippuris sometimes emergent, but leaves/ fowers distinctive) . .02 2a 02a Plants without green leaves . Orobanchaceae (in part) . - Aphyllon [Orobanche], Boschniakia 02b Plants with green leaves . 03 03a Leaves all basal (sometimes small, unstalked stem leaves present), undivided (simple), with edges ± smooth or blunt-toothed; fowers small (2-5 mm wide), corollas radially symmetrical, sometimes absent. -
Isles of Scilly 2018
Isles of Scilly, species list and trip report, 7 to 14 May 2018 WILDLIFE TRAVEL v Isles of Scilly 2018 Isles of Scilly, species list and trip report, 7 to 14 May 2018 # DATE LOCATIONS AND NOTES 1 7 May Arrival on the Isles of Scilly. 2 8 May St Agnes. 3 9 May Bryher. 4 10 May Tresco 5 11 May St Mary's 6 12 May St Mary's 7 13 May St Martin's 8 14 May Departure from the Isles of Scilly. Above - view from Mincarlo. Front cover - St Martin's Isles of Scilly, species list and trip report, 7 to 14 May 2018 Day One: 7 May. Arrival on the Isles of Scilly. Due to sea fog around the coast the flights to Scilly had been cancelled. Fortunately for the five people planning to fly to Scilly there was just time for them to be transferred by road to Penzance in time for RMS Scillonian’s second sailing of the day. The second sailing was unusual due to the huge number of people who had been on the Isles of Scilly for the Pilot Gig Weekend. Gig Weekends have become extraordinarily popular, with the 2018 season the biggest yet; 150 gig boats, their six rowers plus cox and many supporters were on Scilly to watch or participate in the races. Crews had come from south-west England, and as far away as Holland and United States, and most had brought their friends! Five clients were also booked on the ferry and some met up there with Rosemary.