Long-Read Transcriptome and Other Genomic Resources for the Angiosperm Silene Noctiflora
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Miniaturized Mitogenome of the Parasitic Plant Viscum
Miniaturized mitogenome of the parasitic plant PNAS PLUS Viscum scurruloideum is extremely divergent and dynamic and has lost all nad genes Elizabeth Skippingtona, Todd J. Barkmanb, Danny W. Ricea, and Jeffrey D. Palmera,1 aDepartment of Biology, Indiana University, Bloomington, IN 47405; and bDepartment of Biological Sciences, Western Michigan University, Kalamazoo, MI 49008 Edited by David M. Hillis, The University of Texas at Austin, Austin, TX, and approved June 1, 2015 (received for review March 5, 2015) Despite the enormous diversity among parasitic angiosperms in revealed that host-to-parasite HGT has been frequent in Raf- form and structure, life-history strategies, and plastid genomes, flesiaceae mitogenomes, which otherwise are relatively unremark- little is known about the diversity of their mitogenomes. We able with respect to gene content and sequence divergence (8). report the sequence of the wonderfully bizarre mitogenome of Depending on the Rafflesiaceae species, 24–41% of protein genes the hemiparasitic aerial mistletoe Viscum scurruloideum. This ge- are inferred to have been acquired by HGT. The repetitive nature nome is only 66 kb in size, making it the smallest known angio- of Rafflesiaceae mtDNAs and the short reads used in these studies sperm mitogenome by a factor of more than three and the rendered assembly of complete genome sequences impractical, smallest land plant mitogenome. Accompanying this size reduc- but with a minimum size of 320 kb, the Rafflesia lagascae mito- tion is exceptional reduction of gene content. Much of this reduc- genome (4) falls within the known angiosperm size range (0.2– tion arises from the unexpected loss of respiratory complex I 11.3 Mb) (9, 10). -
Pinery Provincial Park Vascular Plant List Flowering Latin Name Common Name Community Date
Pinery Provincial Park Vascular Plant List Flowering Latin Name Common Name Community Date EQUISETACEAE HORSETAIL FAMILY Equisetum arvense L. Field Horsetail FF Equisetum fluviatile L. Water Horsetail LRB Equisetum hyemale L. ssp. affine (Engelm.) Stone Common Scouring-rush BS Equisetum laevigatum A. Braun Smooth Scouring-rush WM Equisetum variegatum Scheich. ex Fried. ssp. Small Horsetail LRB Variegatum DENNSTAEDIACEAE BRACKEN FAMILY Pteridium aquilinum (L.) Kuhn Bracken-Fern COF DRYOPTERIDACEAE TRUE FERN FAMILILY Athyrium filix-femina (L.) Roth ssp. angustum (Willd.) Northeastern Lady Fern FF Clausen Cystopteris bulbifera (L.) Bernh. Bulblet Fern FF Dryopteris carthusiana (Villars) H.P. Fuchs Spinulose Woodfern FF Matteuccia struthiopteris (L.) Tod. Ostrich Fern FF Onoclea sensibilis L. Sensitive Fern FF Polystichum acrostichoides (Michaux) Schott Christmas Fern FF ADDER’S-TONGUE- OPHIOGLOSSACEAE FERN FAMILY Botrychium virginianum (L.) Sw. Rattlesnake Fern FF FLOWERING FERN OSMUNDACEAE FAMILY Osmunda regalis L. Royal Fern WM POLYPODIACEAE POLYPODY FAMILY Polypodium virginianum L. Rock Polypody FF MAIDENHAIR FERN PTERIDACEAE FAMILY Adiantum pedatum L. ssp. pedatum Northern Maidenhair Fern FF THELYPTERIDACEAE MARSH FERN FAMILY Thelypteris palustris (Salisb.) Schott Marsh Fern WM LYCOPODIACEAE CLUB MOSS FAMILY Lycopodium lucidulum Michaux Shining Clubmoss OF Lycopodium tristachyum Pursh Ground-cedar COF SELAGINELLACEAE SPIKEMOSS FAMILY Selaginella apoda (L.) Fern. Spikemoss LRB CUPRESSACEAE CYPRESS FAMILY Juniperus communis L. Common Juniper Jun-E DS Juniperus virginiana L. Red Cedar Jun-E SD Thuja occidentalis L. White Cedar LRB PINACEAE PINE FAMILY Larix laricina (Duroi) K. Koch Tamarack Jun LRB Pinus banksiana Lambert Jack Pine COF Pinus resinosa Sol. ex Aiton Red Pine Jun-M CF Pinery Provincial Park Vascular Plant List 1 Pinery Provincial Park Vascular Plant List Flowering Latin Name Common Name Community Date Pinus strobus L. -
Diversity of Sexual Systems Within Different Lineages of the Genus Silene
Research Article Diversity of sexual systems within different lineages of the genus Silene Ine´s Casimiro-Soriguer1,2*, Maria L. Buide1 and Eduardo Narbona1 1 A´ rea de Bota´nica, Departamento de Biologı´a Molecular e Ingenierı´a Bioquı´mica, Universidad Pablo de Olavide, Ctra. de Utrera, km 1, 41013 Sevilla, Spain 2 A´ rea de Bota´nica, Departamento de Biologı´a Vegetal y Ecologı´a, Universidad de Sevilla, Avenida Reina Mercedes s/n, 41012 Sevilla, Spain Received: 16 December 2014; Accepted: 26 March 2015; Published: 10 April 2015 Associate Editor: Diana Wolf Citation: Casimiro-Soriguer I, Buide ML, Narbona E. 2015. Diversity of sexual systems within different lineages of the genus Silene. AoB PLANTS 7: plv037; doi:10.1093/aobpla/plv037 Abstract. Species and populations can be categorized by their sexual systems, depending on the spatial distribu- tion of female and male reproductive structures within and among plants. Although a high diversity of sexual systems exists in Silene, their relative frequency at the genus and infrageneric level is unknown. Here, we carried out an exten- sive literature search for direct or indirect descriptions of sexual systems in Silene species. We found descriptions of sexual systems for 98 Silene species, where 63 and 35 correspond to the phylogenetically supported subgenera Silene and Behenantha, respectively. Hermaphroditism was the commonest sexual system (58.2 %), followed by dioecy (14.3 %), gynodioecy (13.3 %) and gynodioecy–gynomonoecy (i.e. hermaphroditic, female and gynomonoecious plants coexisting in the same population; 12.2 %). The presence of these sexual systems in both subgenera suggests their multiple origins. -
Flora Mediterranea 26
FLORA MEDITERRANEA 26 Published under the auspices of OPTIMA by the Herbarium Mediterraneum Panormitanum Palermo – 2016 FLORA MEDITERRANEA Edited on behalf of the International Foundation pro Herbario Mediterraneo by Francesco M. Raimondo, Werner Greuter & Gianniantonio Domina Editorial board G. Domina (Palermo), F. Garbari (Pisa), W. Greuter (Berlin), S. L. Jury (Reading), G. Kamari (Patras), P. Mazzola (Palermo), S. Pignatti (Roma), F. M. Raimondo (Palermo), C. Salmeri (Palermo), B. Valdés (Sevilla), G. Venturella (Palermo). Advisory Committee P. V. Arrigoni (Firenze) P. Küpfer (Neuchatel) H. M. Burdet (Genève) J. Mathez (Montpellier) A. Carapezza (Palermo) G. Moggi (Firenze) C. D. K. Cook (Zurich) E. Nardi (Firenze) R. Courtecuisse (Lille) P. L. Nimis (Trieste) V. Demoulin (Liège) D. Phitos (Patras) F. Ehrendorfer (Wien) L. Poldini (Trieste) M. Erben (Munchen) R. M. Ros Espín (Murcia) G. Giaccone (Catania) A. Strid (Copenhagen) V. H. Heywood (Reading) B. Zimmer (Berlin) Editorial Office Editorial assistance: A. M. Mannino Editorial secretariat: V. Spadaro & P. Campisi Layout & Tecnical editing: E. Di Gristina & F. La Sorte Design: V. Magro & L. C. Raimondo Redazione di "Flora Mediterranea" Herbarium Mediterraneum Panormitanum, Università di Palermo Via Lincoln, 2 I-90133 Palermo, Italy [email protected] Printed by Luxograph s.r.l., Piazza Bartolomeo da Messina, 2/E - Palermo Registration at Tribunale di Palermo, no. 27 of 12 July 1991 ISSN: 1120-4052 printed, 2240-4538 online DOI: 10.7320/FlMedit26.001 Copyright © by International Foundation pro Herbario Mediterraneo, Palermo Contents V. Hugonnot & L. Chavoutier: A modern record of one of the rarest European mosses, Ptychomitrium incurvum (Ptychomitriaceae), in Eastern Pyrenees, France . 5 P. Chène, M. -
Investigating Past Range Dynamics for a Weed of Cultivation, Silene Vulgaris Megan E
Investigating past range dynamics for a weed of cultivation, Silene vulgaris Megan E. Sebasky1, Stephen R. Keller2 & Douglas R. Taylor1 1Department of Biology, University of Virginia, Charlottesville, Virginia 2Department of Plant Biology, University of Vermont, Burlington, Vermont Keywords Abstract Glacial refugia, last glacial maximum, MaxEnt, phylogeography, postglacial Since the last glacial maximum (LGM), many plant and animal taxa have expansion, Silene vulgaris, species distribution expanded their ranges by migration from glacial refugia. Weeds of cultivation model. may have followed this trend or spread globally following the expansion of agri- culture or ruderal habitats associated with human-mediated disturbance. We Correspondence tested whether the range expansion of the weed Silene vulgaris across Europe fit Megan E. Sebasky and Douglas R. Taylor, the classical model of postglacial expansion from southern refugia, or followed Department of Biology, University of Virginia, 485 McCormick Road, PO Box 400328, known routes of the expansion of human agricultural practices. We used spe- Charlottesville, VA 22904. cies distribution modeling to predict spatial patterns of postglacial expansion Tel: 434-982-5217; and contrasted these with the patterns of human agricultural expansion. A pop- Fax: 434-982-5626; ulation genetic analysis using microsatellite loci was then used to test which E-mails: [email protected] and scenario was better supported by spatial patterns of genetic diversity and struc- [email protected] ture. Genetic diversity was highest in southern Europe and declined with increasing latitude. Locations of ancestral demes from genetic cluster analysis Funding Information were consistent with areas of predicted refugia. Species distribution models National Science Foundation (Grant/Award Number: ‘MCB1022128’). -
The Experience Elicited by Hallucinogens Presents the Highest Similarity to Dreaming Within a Large Database of Psychoactive Substance Reports
ORIGINAL RESEARCH published: 22 January 2018 doi: 10.3389/fnins.2018.00007 The Experience Elicited by Hallucinogens Presents the Highest Similarity to Dreaming within a Large Database of Psychoactive Substance Reports Camila Sanz 1, Federico Zamberlan 1, Earth Erowid 2, Fire Erowid 2 and Enzo Tagliazucchi 1,3* 1 Departamento de Física, Universidad de Buenos Aires, Buenos Aires, Argentina, 2 Erowid Center, Grass Valley, CA, United States, 3 Brain and Spine Institute, Paris, France Ever since the modern rediscovery of psychedelic substances by Western society, Edited by: several authors have independently proposed that their effects bear a high resemblance Rick Strassman, to the dreams and dreamlike experiences occurring naturally during the sleep-wake University of New Mexico School of cycle. Recent studies in humans have provided neurophysiological evidence supporting Medicine, United States this hypothesis. However, a rigorous comparative analysis of the phenomenology (“what Reviewed by: Matthias E. Liechti, it feels like” to experience these states) is currently lacking. We investigated the semantic University Hospital Basel, Switzerland similarity between a large number of subjective reports of psychoactive substances and Michael Kometer, University of Zurich, Switzerland reports of high/low lucidity dreams, and found that the highest-ranking substance in *Correspondence: terms of the similarity to high lucidity dreams was the serotonergic psychedelic lysergic Enzo Tagliazucchi acid diethylamide (LSD), whereas the highest-ranking in terms of the similarity to dreams [email protected] of low lucidity were plants of the Datura genus, rich in deliriant tropane alkaloids. Specialty section: Conversely, sedatives, stimulants, antipsychotics, and antidepressants comprised most This article was submitted to of the lowest-ranking substances. -
Saatgut Vom Natürlichen Standort/Seeds From
Index Seminum 2016 ANNO 2016 COLLECTORUM - DESIDERATA 2017 Botanischer Garten Universität Duisburg-Essen ** = Saatgut vom natürlichen Standort / seeds from natural habitat, all other seeds from open pollination (hybridization possible) Acanthaceae 1. Acanthus spinosus L. 2. Andrographis paniculata (Burm.f.) Nees 3. Schaueria flavicoma N.E.Br. 4. Thunbergia alata Bojer ex Sims Adoxaceae 5. Viburnum rhytidophyllum Hemsl. Amaranthaceae 6. Chenopodium bonus-henricus L. Amaryllidaceae 7. Agapanthus campanulatus 8. Allium cernuum Roth 9. Allium fistulosum L. 10. Allium obliquum L. 11. Allium sativum L. var. ophioscorodon 12. Allium schoenoprasum L. 13. Allium sphaerocephalon L. 14. Allium tuberosum Rottler ex Spreng. 15. Allium ursinum L. 16. Clivia miniata (Lindl.) Bosse 17. Tulbaghia simmleri Beauverd 18. Tulbaghia violacea Harv. Annonaceae 19. Annona muricata L. 20. Annona cherimola, Kulturform 21. Artabotrys hexapetalus (L.f.) Bhandari Apiaceae 22. Ammi majus L. 23. Angelica archangelica L. 24. Angelica sylvestris L. 25. Anthriscus cerefolium (L.) Hoffm. 26. Apium graveolens L. 27. Astrantia carniolica Wulfen 1 28. Astrantia major L. 29. Athamanta cretensis L. 30. Bupleurum rotundifolium L. 31. Carum carvi L. 32. Coriandrum sativum L. 33. Daucus carota L. 34. Eryngium campestre L. 35. Eryngium foetidum L. 36. Foeniculum vulgare Mill. 37. Foeniculum vulgare Mill. ‚Purpureum‘ 38. Levisticum officinale W.D.J.Koch 39. Ligusticum lucidum Mill 40. Ligusticum scoticum L. 41. Mutellina adonidifolia (J.Gay) Gutermann 42. Myrrhis odorata Scop. 43. Oenanthe lachenalii C.C.Gmel. 44. Oenanthe pimpinelloides L. 45. Pimpinella saxifraga L. 46. Sanicula europaea L. 47. Scandix pecten-veneris L. 48. Sium sisarum L. 49. Torilis japonica (Houtt.) DC Apocynaceae 50. Acokanthera oblongifolia (Hochst.) Benth. -
Ethnobotanical Review of Wild Edible Plants in Spain
Blackwell Publishing LtdOxford, UKBOJBotanical Journal of the Linnean Society0024-4074The Linnean Society of London, 2006? 2006 View metadata, citation and similar papers1521 at core.ac.uk brought to you by CORE 2771 Original Article provided by Digital.CSIC EDIBLE WILD PLANTS IN SPAIN J. TARDÍO ET AL Botanical Journal of the Linnean Society, 2006, 152, 27–71. With 2 figures Ethnobotanical review of wild edible plants in Spain JAVIER TARDÍO1*, MANUEL PARDO-DE-SANTAYANA2† and RAMÓN MORALES2 1Instituto Madrileño de Investigación y Desarrollo Rural, Agrario y Alimentario (IMIDRA), Finca El Encín, Apdo. 127, E-28800 Alcalá de Henares, Madrid, Spain 2Real Jardín Botánico, CSIC, Plaza de Murillo 2, E-28014 Madrid, Spain Received October 2005; accepted for publication March 2006 This paper compiles and evaluates the ethnobotanical data currently available on wild plants traditionally used for human consumption in Spain. Forty-six ethnobotanical and ethnographical sources from Spain were reviewed, together with some original unpublished field data from several Spanish provinces. A total of 419 plant species belonging to 67 families was recorded. A list of species, plant parts used, localization and method of consumption, and harvesting time is presented. Of the seven different food categories considered, green vegetables were the largest group, followed by plants used to prepare beverages, wild fruits, and plants used for seasoning, sweets, preservatives, and other uses. Important species according to the number of reports include: Foeniculum vulgare, Rorippa nasturtium-aquaticum, Origanum vulgare, Rubus ulmifolius, Silene vulgaris, Asparagus acutifolius, and Scolymus hispanicus. We studied data on the botanical families to which the plants in the different categories belonged, over- lapping between groups and distribution of uses of the different species. -
2019-Identification
Carrot Family (Apiaceae) Giant hogweed ● Heracleum mantegazzianum Invasiveness Rank: 81 points Species Code: HEMA17 General Information: Biennial or perennial 3-4.5 m tall Typically die after flowering Description: Stems Hollow Reddish spots Bristles Leaves Compound Inflorescence Umbels up to 75 cm in diameter Flowers small and white Fruits Flat, oval, dry Habitat: damp locations, along rivers and streams, disturbed areas including waste places and roadsides Distribution: Pacific maritime; only one population known in Kake, which appears to have been eradicated. Comparison to native H. maximum: Height Umbel Width Leaves H. mantegazzianum < 4.5 m < 75 cm Compound H. maximum < 1.8 m <30 cm Palmately lobed 115 Touch-me-not Family (Balsaminaceae) Ornamental jewelweed ● Impatiens glandulifera Invasiveness Rank: 82 points Species Code: IMGL General Information: 0.9-1.8 m tall Entire plant has purple or reddish tinge Description: Stems Hollow Leaves Mostly opposite or whorled Serrated margins Petioles with large glands Inflorescence White, pink, red or purple With a 4-5 mm long spur Fruits © 2015 AKNHP b- Dehisce explosively (ripe seeds shoot out when touched) Habitat: riparian areas, wetlands, beach meadows; escapes from gardens Distribution: few sites in the Pacific maritime and interior boreal regions; Kenai, Anchorage, Juneau, Skagway, Haines; in and near Fairbanks and Salcha Touch-me-not ● Impatiens noli-tangere General Information: 0.2-0.8 m tall Smaller than I. glandulifera Description: Stems Watery to fleshy Leaves Alternate Margins coarsely toothed Inflorescence Yellow-orange with brown spots With a 6-10 mm long spur Fruits Dehisce explosively Habitat: moist forests and stream banks Distribution: Pacific maritime and interior boreal regions 116 Other Families Key to select common, small, blue-flowered species: 1a. -
Colour Pages
COLOUR PAGES CHAPTER 1. L.J. Slikkerveer; Figures 1, 2, and 3 Figure 1. Two pages of Dioscorides’ most influential herbal Peri Hylès latrikès (De Materia Medica) of the first century A.D., describing more than 600 medicinal plants used in ancient Greek medicine Figure 2. Egyptian wooden cabinet from the 20th Dynasty (1126-1108 B.C.) used for safekeeping mostly plant-based cosmetics, found in a tomb near Thebes Figure 3. Evolution of the methods of botanical investigation, as represented from left to right by Leonard Fuchs’s sketch of the thorn apple (Datura stramonium) of 1543; Köhlers more detailed pharmacognostic illustration of this plant in his Medizinal-Pflanzenatlas Vol. I of 1887; a recent typical herbarium specimen of botanical identification of the plant; and a detailed image of the leaf surface provided by an electron-scanning microscope CHAPTER 3. K.F. Wiersum, A.P. Dold, M. Husselman and M. Cocks; Figure 2. Figure 2. Homegarden cultivation of medicinal plants (Silene undulata–unozitholana) Photo: A. Dold COLOUR PAGES CHAPTER 4. T. Flaster; Figure 1. Figure 1. Market visit image CHAPTER 5. A. Brown; Figures 1 and 2. Regional Markets markets outside the region Wholesale Markets Exporter Consumers Branded in the processors National Capital District Traders Small District Processors Town Consumers Centre Heads (Agents) Local Traders Local Consumers Village Level Processor Farmers, collectors, and farm level pre-processors (e.g sorting and drying) Figure 1. The MAP marketing system Regional Markets markets outside the region Wholesale Markets Exporter Consumers Branded in the processors National Capital District Traders Small District Processors Town Consumers Centre Heads (Agents) Local Traders Local Consumers Village Level Processor Farmers, collectors, and farm level pre-processors (e.g sorting and drying) Figure 2. -
Colour Pages
COLOUR PAGES CHAPTER 1. L.J. Slikkerveer; Figures 1, 2, and 3 Figure 1. Two pages of Dioscorides’ most influential herbal Peri Hylès Iatrikès (De Materia Medica) of the first century A.D., describing more than 600 medicinal plants used in ancient Greek medicine Figure 2. Egyptian wooden cabinet from the 20th Dynasty (1126-1108 B.C.) used for safekeeping mostly plant-based cosmetics, found in a tomb near Thebes Figure 3. Evolution of the methods of botanical investigation, as represented from left to right by Leonard Fuchs’s sketch of the thorn apple (Datura stramonium) of 1543; Köhlers more detailed pharmacognostic illustration of this plant in his Medizinal-Pflanzenatlas Vol. I of 1887; a recent typical herbarium specimen of botanical identification of the plant; and a detailed image of the leaf surface provided by an electron-scanning microscope CHAPTER 3. K.F. Wiersum, A.P. Dold, M. Husselman and M. Cocks; Figure 2. Figure 2. Homegarden cultivation of medicinal plants (Silene undulata–unozitholana) Photo: A. Dold COLOUR PAGES CHAPTER 4. T. Flaster; Figure 1. Figure 1. Market visit image CHAPTER 5. A. Brown; Figures 1 and 2. Regional Markets markets outside the region Wholesale Markets Exporter Consumers Branded in the processors National Capital District Traders Small District Processors Town Consumers Centre Heads (Agents) Local Traders Local Consumers Village Level Processor Farmers, collectors, and farm level pre-processors (e.g sorting and drying) Figure 1. The MAP marketing system Regional Markets markets outside the region Wholesale Markets Exporter Consumers Branded in the processors National Capital District Traders Small District Processors Town Consumers Centre Heads (Agents) Local Traders Local Consumers Village Level Processor Farmers, collectors, and farm level pre-processors (e.g sorting and drying) Figure 2. -
Washington Flora Checklist a Checklist of the Vascular Plants of Washington State Hosted by the University of Washington Herbarium
Washington Flora Checklist A checklist of the Vascular Plants of Washington State Hosted by the University of Washington Herbarium The Washington Flora Checklist aims to be a complete list of the native and naturalized vascular plants of Washington State, with current classifications, nomenclature and synonymy. The checklist currently contains 3,929 terminal taxa (species, subspecies, and varieties). Taxa included in the checklist: * Native taxa whether extant, extirpated, or extinct. * Exotic taxa that are naturalized, escaped from cultivation, or persisting wild. * Waifs (e.g., ballast plants, escaped crop plants) and other scarcely collected exotics. * Interspecific hybrids that are frequent or self-maintaining. * Some unnamed taxa in the process of being described. Family classifications follow APG IV for angiosperms, PPG I (J. Syst. Evol. 54:563?603. 2016.) for pteridophytes, and Christenhusz et al. (Phytotaxa 19:55?70. 2011.) for gymnosperms, with a few exceptions. Nomenclature and synonymy at the rank of genus and below follows the 2nd Edition of the Flora of the Pacific Northwest except where superceded by new information. Accepted names are indicated with blue font; synonyms with black font. Native species and infraspecies are marked with boldface font. Please note: This is a working checklist, continuously updated. Use it at your discretion. Created from the Washington Flora Checklist Database on September 17th, 2018 at 9:47pm PST. Available online at http://biology.burke.washington.edu/waflora/checklist.php Comments and questions should be addressed to the checklist administrators: David Giblin ([email protected]) Peter Zika ([email protected]) Suggested citation: Weinmann, F., P.F. Zika, D.E. Giblin, B.