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Vanillin Formation from Ferulic Acid in Vanilla Planifolia Is Catalysed by a Single Enzyme
Vanillin formation from ferulic acid in Vanilla planifolia is catalysed by a single enzyme Gallage, Nethaji Janeshawari; Hansen, Esben Halkjær; Kannangara, Rubini Maya; Olsen, Carl Erik; Motawie, Mohammed Saddik; Jørgensen, Kirsten; Holme, Inger; Hebelstrup, Kim; Grisoni, Michel ; Møller, Birger Lindberg Published in: Nature Communications DOI: 10.1038/ncomms5037 Publication date: 2014 Document version Publisher's PDF, also known as Version of record Citation for published version (APA): Gallage, N. J., Hansen, E. H., Kannangara, R. M., Olsen, C. E., Motawie, M. S., Jørgensen, K., Holme, I., Hebelstrup, K., Grisoni, M., & Møller, B. L. (2014). Vanillin formation from ferulic acid in Vanilla planifolia is catalysed by a single enzyme. Nature Communications, 5(6), [4037]. https://doi.org/10.1038/ncomms5037 Download date: 01. okt.. 2021 ARTICLE Received 19 Nov 2013 | Accepted 6 May 2014 | Published 19 Jun 2014 DOI: 10.1038/ncomms5037 OPEN Vanillin formation from ferulic acid in Vanilla planifolia is catalysed by a single enzyme Nethaji J. Gallage1,2,3, Esben H. Hansen4, Rubini Kannangara1,2,3, Carl Erik Olsen1,2, Mohammed Saddik Motawia1,2,3, Kirsten Jørgensen1,2,3, Inger Holme5, Kim Hebelstrup5, Michel Grisoni6 & Birger Lindberg Møller1,2,3,7 Vanillin is a popular and valuable flavour compound. It is the key constituent of the natural vanilla flavour obtained from cured vanilla pods. Here we show that a single hydratase/lyase type enzyme designated vanillin synthase (VpVAN) catalyses direct conversion of ferulic acid and its glucoside into vanillin and its glucoside, respectively. The enzyme shows high sequence similarity to cysteine proteinases and is specific to the substitution pattern at the aromatic ring and does not metabolize caffeic acid and p-coumaric acid as demonstrated by coupled transcription/translation assays. -
Pilot Scale Cultivation and Production of Vanilla Planifolia in the United Arab Emirates
1143 Bulgarian Journal of Agricultural Science, 25 (No 6) 2019, 1143–1150 Pilot scale cultivation and production of Vanilla planifolia in the United Arab Emirates Khalil Ur Rahman1*, Mohamed Khalifa Bin Thaleth1, George Mathew Kutty1, Ramachandran Subramanian2* 1Al Nakhli Management, Dubai Hatta Road, Dubai, United Arab Emirates 2Birla Institute of Technology and Science, Department of Biotechnology, Pilani, Dubai campus, PO Box 345055, Dubai, United Arab Emirates *Correspondence author: [email protected], [email protected] Abstract Rahman, K., Thaleth, M. K. B., Kutty, G. M. & Subramanian, R. (2019). Pilot scale cultivation and production of Vanilla planifolia in the United Arab Emirates. Bulgarian Journal of Agricultural Science, 25 (6), 1143–1150 Vanilla planifolia is cultivated in the tropical climate and primarily grown in Madagascar, Indonesia, China and Mexico. Pilot-scale cultivation of V. planifolia was trialed under greenhouse conditions in the United Arab Emirates. V. planifolia cut- tings were obtained from India and it was grown through vegetative propagation. The cuttings of 50 cm long were planted in the soil-compost substrate at 4:1 ratio and irrigated with freshwater (water salinity 263 μS/cm). Every three months plant-based compost was added at a rate of 4 kg m-2. The height of the vanilla plant was maintained at 1.5 m and vines were supported by galvanized pipes covered by ropes. The manual pollination method was carried out upon blooming. Pods were harvested man- ually when the tip turned light brown. Mature pods were graded, blanched, dried and packaged. 20 kg fresh pods obtained from the ten vanilla plants produced 4 kg processed and dried pods after curing by blanching and drying. -
Natural Endophytic Association Between Rhizobium Etli and Maize (Zea Mays L.)
Journal of Biotechnology 91 (2001) 117–126 www.elsevier.com/locate/jbiotec Natural endophytic association between Rhizobium etli and maize (Zea mays L.) M.L. Gutie´rrez-Zamora, E. Martı´nez-Romero * Centro de In6estigacio´n sobre Fijacio´n de Nitro´geno, UNAM. Ap.P. 565A, 62251 Cuerna6aca, Mexico Received 19 September 2000; received in revised form 16 January 2001; accepted 2 February 2001 Abstract Maize (Zea mays) and bean (Phaseolus 6ulgaris) have been traditionally grown in association for thousands of years in Mesoamerica. From surface sterilized maize roots, we have isolated over 60 Rhizobium strains that correspond to Rhizobium etli bv. phaseoli (the main symbiont of bean) on the basis of 16S rRNA gene restriction patterns, metabolic enzyme electropherotypes, organization of nif genes, and the ability to nodulate beans. The colonization capacity of some of the isolates was tested with an unimproved maize cultivar and with 30 maize land races. Increases in plant dry weight upon R. etli inoculation were recorded with some of the land races, and these increases may be related to plant growth promotion effects. Additionally, from within maize grown in monoculture we have also recovered R. etli isolates recognizable by their 16S rRNA gene types, which lack nif genes and are incapable of nodulating bean. These strains are presumed to correspond to the earlier described non-symbiotic R. etli obtained from bean rhizosphere. © 2001 Elsevier Science B.V. All rights reserved. Keywords: Rhizobium; Endophytes; Maize; Land races; Nitrogen fixation 1. Introduction 1998; James, 2000). In both sugar cane and rice, bacterial nitrogen fixation can contribute a sub- Cereals such as maize have high N fertilization stantial proportion of N to the plant (App et al., requirements for optimal yield. -
Rhizobium,, Agrobacterium Agrobacterium
Systems Microbiology Wednes Nov 1 - Brock Ch 17, 586-591 Ch 19, 656-66 Ch 31, 989-991 •• TheThe GlobalGlobal NitrogenNitrogen CycleCycle •• NN2 fixationfixation -- generalgeneral considerationsconsiderations •• PlantPlant microbialmicrobial symbiosessymbioses RhizobiumRhizobium,, AgrobacteriumAgrobacterium Table and diagram of the key processes and prokaryotes in the nitrogen cycle removed due to copyright restrictions. See Figure 19-28 in Madigan, Michael, and John Martinko. Brock Biology of Microorganisms. 11th ed. Upper Saddle River, NJ: Pearson PrenticeHall, 2006. ISBN: 0131443291. Nitrification Chemolithoautotrophs (aerobic) • Ammonia Oxidizers (Nitrosomonas, Nitrosococcus) • Nitrite Oxidizers (Nitrobacter, Nitrococcus) • Slow growing (less free energy available) • Enzyme ammonia monooxygenase - NO - NO - NH4 NO2 2 3 AO NO e- e- CO2 CH2O CO2 CH2O O2 H20 O2 H20 NH + Cation exchange capacity: 4 the ability of a soil to hold on to cations + NH + soil NH4 4 particle Microbial nitrification can effect + NH4 the retention of nitrogen in soil - NO3 - NO3 - NO3 - NO3 - NO - NO - NH4 NO2 2 3 AO NO e- e- CO2 CH2O CO2 CH2O O2 H20 O2 H20 NITROGEN CYCLING IN AQUARIA Image of fish swimming in an aquarium removed due to copyright restrictions. http://www.hubbardbrook.org/research/ gallery/powerpoint/Slide2.jpg ViewView from aboveabove Lake Lake 226 226 divider divider curtain curtain in Augustin August 1973. 1973. The bright green colour results from Cyanobacteria, which are growing on phosphorus added to the near side of the curtain. What happen’s when you dump lots of phosphate in a lake ??? Aerial view of Lake 227 in 1994. Note the bright green color caused by algae stimulated by the experimental addition of phosphorus for the 26th consecutive year. -
Defining the Rhizobium Leguminosarum Species Complex
Preprints (www.preprints.org) | NOT PEER-REVIEWED | Posted: 12 December 2020 doi:10.20944/preprints202012.0297.v1 Article Defining the Rhizobium leguminosarum species complex J. Peter W. Young 1,*, Sara Moeskjær 2, Alexey Afonin 3, Praveen Rahi 4, Marta Maluk 5, Euan K. James 5, Maria Izabel A. Cavassim 6, M. Harun-or Rashid 7, Aregu Amsalu Aserse 8, Benjamin J. Perry 9, En Tao Wang 10, Encarna Velázquez 11, Evgeny E. Andronov 12, Anastasia Tampakaki 13, José David Flores Félix 14, Raúl Rivas González 11, Sameh H. Youseif 15, Marc Lepetit 16, Stéphane Boivin 16, Beatriz Jorrin 17, Gregory J. Kenicer 18, Álvaro Peix 19, Michael F. Hynes 20, Martha Helena Ramírez-Bahena 21, Arvind Gulati 22 and Chang-Fu Tian 23 1 Department of Biology, University of York, York YO10 5DD, UK 2 Department of Molecular Biology and Genetics, Aarhus University, Aarhus, Denmark; [email protected] 3 Laboratory for genetics of plant-microbe interactions, ARRIAM, Pushkin, 196608 Saint-Petersburg, Russia; [email protected] 4 National Centre for Microbial Resource, National Centre for Cell Science, Pune, India; [email protected] 5 Ecological Sciences, The James Hutton Institute, Invergowrie, Dundee DD2 5DA, UK; [email protected] (M.M.); [email protected] (E.K.J.) 6 Department of Ecology and Evolutionary Biology, University of California, Los Angeles, CA 90095, USA; [email protected] 7 Biotechnology Division, Bangladesh Institute of Nuclear Agriculture (BINA), Bangladesh; [email protected] 8 Ecosystems and Environment Research programme , Faculty of Biological and Environmental Sciences, University of Helsinki, FI-00014 Finland; [email protected] 9 Department of Microbiology and Immunology, University of Otago, Dunedin 9016, New Zealand; [email protected] 10 Departamento de Microbiología, Escuela Nacional de Ciencias Biológicas, Instituto Politécnico Nacional, Cd. -
Ficus Virens Aiton Var
REPORT Vol. 22(69), 2021 REPORT ARTICLE ISSN 2319–5746 EISSN 2319–5754 Species Ficus virens Aiton var. matthewii Chantaras: A new distributional record from Kerala Sreehari S Nair1, Amitha Bachan KH1, Ebin PJ2, Lesly Augustine2, Anto Joseph2 1Research and P G Department of Botany, MES Asmabi College, P. Vemballur, Thrissur, Kerala, India 2Department of Botany, Sacred Heart College, Thevara, Kerala, India Corresponding author: Sreehari Sivan Nair Research and P G Department of Botany MES Asmabi College P. Vemballur, Thrissur, Kerala, India Email: [email protected] Mobile: +91 8547394911 Peer-Review History Received: 02 December 2020 Reviewed, Revised & Accepted: 04 December 2020 to 15 January 2021 Published: January 2021 Citation Nair SS, Bachan KHA, Ebin PJ, Augustine L, Josep A. Ficus virens Aiton var. matthewii Chantaras: A new distributional record from Kerala. Species, 2021, 22(69), 21-28 Publication License This work is licensed under a Creative Commons Attribution 4.0 International License. General Note Article is recommended to print as color digital version in recycled paper. ABSTRACT During the field explorations in the Wayanad District of Kerala, the authors came across an interesting specimen of Ficus. On further examination, literature review and herbarium references, it was confirmed as Ficus virens Aiton var. matthewii Chantaras. This variety is an addition to the floral diversity of Kerala. Detailed description, illustrations and colour plates are provided here along with a comparison with its allied variety. 21 Page Key words: Ficus, Kerala, New distributional record. © 2021 Discovery Scientific Society. All Rights Reserved. www.discoveryjournals.org l OPEN ACCESS REPORT ARTICLE INTRODUCTION The genus Ficus L., is one of the most complex and advanced angiosperms belonging to the family Moraceae (Corner, 1965; Berg and Corner, 2005). -
Ecology and Ex Situ Conservation of Vanilla Siamensis (Rolfe Ex Downie) in Thailand
Kent Academic Repository Full text document (pdf) Citation for published version Chaipanich, Vinan Vince (2020) Ecology and Ex Situ Conservation of Vanilla siamensis (Rolfe ex Downie) in Thailand. Doctor of Philosophy (PhD) thesis, University of Kent,. DOI Link to record in KAR https://kar.kent.ac.uk/85312/ Document Version UNSPECIFIED Copyright & reuse Content in the Kent Academic Repository is made available for research purposes. Unless otherwise stated all content is protected by copyright and in the absence of an open licence (eg Creative Commons), permissions for further reuse of content should be sought from the publisher, author or other copyright holder. Versions of research The version in the Kent Academic Repository may differ from the final published version. Users are advised to check http://kar.kent.ac.uk for the status of the paper. Users should always cite the published version of record. Enquiries For any further enquiries regarding the licence status of this document, please contact: [email protected] If you believe this document infringes copyright then please contact the KAR admin team with the take-down information provided at http://kar.kent.ac.uk/contact.html Ecology and Ex Situ Conservation of Vanilla siamensis (Rolfe ex Downie) in Thailand By Vinan Vince Chaipanich November 2020 A thesis submitted to the University of Kent in the School of Anthropology and Conservation, Faculty of Social Sciences for the degree of Doctor of Philosophy Abstract A loss of habitat and climate change raises concerns about change in biodiversity, in particular the sensitive species such as narrowly endemic species. Vanilla siamensis is one such endemic species. -
Two Cryptic Species of Lotus (Fabaceae) from the Iberian Peninsula 21-45 Wulfenia 27 (2020): 21– 45 Mitteilungen Des Kärntner Botanikzentrums Klagenfurt
ZOBODAT - www.zobodat.at Zoologisch-Botanische Datenbank/Zoological-Botanical Database Digitale Literatur/Digital Literature Zeitschrift/Journal: Wulfenia Jahr/Year: 2020 Band/Volume: 27 Autor(en)/Author(s): Kramina Tatiana E., Samigullin Tahir H., Meschersky Ilya G. Artikel/Article: Two cryptic species of Lotus (Fabaceae) from the Iberian Peninsula 21-45 Wulfenia 27 (2020): 21– 45 Mitteilungen des Kärntner Botanikzentrums Klagenfurt Two cryptic species of Lotus (Fabaceae) from the Iberian Peninsula Tatiana E. Kramina, Tahir H. Samigullin & Ilya G. Meschersky Summary: The problem of cryptic species is well known in taxonomy of different groups of organisms, including plants, and their recognition can contribute to the assessment of global biodiversity and the development of conservation methods. Analyses of Lotus glareosus and related taxa from the Iberian Peninsula based on various types of data (i.e. sequences of nuclear ribosomal ITS-1-2, 5’ETS and cpDNA trnL-F, seven loci of nuclear microsatellites) revealed that the material earlier determined as ‘L. glareosus’ is subdivided into two genetically distant groups: L. carpetanus, related to L. conimbricensis, and L. glareosus, included in the L. corniculatus complex. Though only slight morphological distinctions were found between them, significant genetic differences comparable to those between sections of the genus Lotus (p-distance 0.07– 0.08 in ITS, 0.060 – 0.067 in ETS and 0.010 – 0.013 in trnL-F; substitution number 43 – 47 bp in ITS, 22–24 bp in ETS and 12–14 bp in trnL-F) and no evidence of genetic exchange suggest that these groups may represent two deeply diverged lineages that should be treated as two separate species. -
Fruits and Seeds of Genera in the Subfamily Faboideae (Fabaceae)
Fruits and Seeds of United States Department of Genera in the Subfamily Agriculture Agricultural Faboideae (Fabaceae) Research Service Technical Bulletin Number 1890 Volume I December 2003 United States Department of Agriculture Fruits and Seeds of Agricultural Research Genera in the Subfamily Service Technical Bulletin Faboideae (Fabaceae) Number 1890 Volume I Joseph H. Kirkbride, Jr., Charles R. Gunn, and Anna L. Weitzman Fruits of A, Centrolobium paraense E.L.R. Tulasne. B, Laburnum anagyroides F.K. Medikus. C, Adesmia boronoides J.D. Hooker. D, Hippocrepis comosa, C. Linnaeus. E, Campylotropis macrocarpa (A.A. von Bunge) A. Rehder. F, Mucuna urens (C. Linnaeus) F.K. Medikus. G, Phaseolus polystachios (C. Linnaeus) N.L. Britton, E.E. Stern, & F. Poggenburg. H, Medicago orbicularis (C. Linnaeus) B. Bartalini. I, Riedeliella graciliflora H.A.T. Harms. J, Medicago arabica (C. Linnaeus) W. Hudson. Kirkbride is a research botanist, U.S. Department of Agriculture, Agricultural Research Service, Systematic Botany and Mycology Laboratory, BARC West Room 304, Building 011A, Beltsville, MD, 20705-2350 (email = [email protected]). Gunn is a botanist (retired) from Brevard, NC (email = [email protected]). Weitzman is a botanist with the Smithsonian Institution, Department of Botany, Washington, DC. Abstract Kirkbride, Joseph H., Jr., Charles R. Gunn, and Anna L radicle junction, Crotalarieae, cuticle, Cytiseae, Weitzman. 2003. Fruits and seeds of genera in the subfamily Dalbergieae, Daleeae, dehiscence, DELTA, Desmodieae, Faboideae (Fabaceae). U. S. Department of Agriculture, Dipteryxeae, distribution, embryo, embryonic axis, en- Technical Bulletin No. 1890, 1,212 pp. docarp, endosperm, epicarp, epicotyl, Euchresteae, Fabeae, fracture line, follicle, funiculus, Galegeae, Genisteae, Technical identification of fruits and seeds of the economi- gynophore, halo, Hedysareae, hilar groove, hilar groove cally important legume plant family (Fabaceae or lips, hilum, Hypocalypteae, hypocotyl, indehiscent, Leguminosae) is often required of U.S. -
Vanilla Montana Ridl.: a NEW LOCALITY RECORD in PENINSULAR MALAYSIA and ITS AMENDED DESCRIPTION
Journal of Sustainability Science and Management eISSN: 2672-7226 Volume 15 Number 7, October 2020: 49-55 © Penerbit UMT Vanilla montana Ridl.: A NEW LOCALITY RECORD IN PENINSULAR MALAYSIA AND ITS AMENDED DESCRIPTION AKMAL RAFFI1,2, FARAH ALIA NORDIN*3, JAMILAH MOHD SALIM1,4 AND HARDY ADRIAN A. CHIN5 1Institute of Tropical Biodiversity and Sustainable Development, Universiti Malaysia Terengganu, 21030, Kuala Nerus, Terengganu. 2Faculty of Resource Science and Technology, Universiti Malaysia Sarawak, 94300, Kota Samarahan, Sarawak. 3School of Biological Sciences, Universiti Sains Malaysia, 11800 USM, Pulau Pinang. 4Faculty of Science and Marine Environment Universiti Malaysia Terengganu, 21030, Kuala Nerus, Terengganu. 5698, Persiaran Merak, Taman Paroi Jaya, 70400, Seremban, Negeri Sembilan. *Corresponding author: [email protected] Submitted final draft: 25 April 2020 Accepted: 11 May 2020 http://doi.org/10.46754/jssm.2020.10.006 Abstract: Among the seven Vanilla species native to Peninsular Malaysia, Vanilla montana was the first species to be described. But due to its rarity, it took more than 100 years for the species to be rediscovered in two other localities. This paper describes the first record of V. montana in Negeri Sembilan with preliminary notes on its floral development and some highlights on the ecological influences. We also proposed a conservation status for the species. The data obtained will serve as an important botanical profile of the species, and it will add to our knowledge gaps on the distribution of this distinctive orchid in Malaysia. Keywords: Biodiversity, florivory, endangeredVanilla , Orchidaceae, Negeri Sembilan. Introduction the peninsula (Go et al., 2015a). Surprisingly, In Peninsular Malaysia, the genus Vanilla Plum. -
Unesco – Eolss Sample Chapters
CULTIVATED PLANTS, PRIMARILY AS FOOD SOURCES – Vol. II– Spices - Éva Németh SPICES Éva Németh BKA University, Department of Medicinal and Aromatic Plants, Budapest, Hungary Keywords: culinary herbs, aromatic plants, condiment, flavoring plants, essential oils, food additives. Contents 1. Introduction 2. Spices of the temperate zone 2.1. Basil, Ocimum basilicum L. (Lamiaceae). (See Figure 1). 2.2. Caraway Carum carvi L. (Apiaceae) 2.3. Dill, Anethum graveolens L. (Apiaceae) 2.4. Mustard, Sinapis alba and Brassica species (Brassicaceae) 2.5. Oregano, Origanum vulgare L. (Lamiaceae) 2.6. Sweet marjoram, Majorana hortensis Mönch. (Lamiaceae) 3. Spices of the tropics 3.1. Cinnamon, Cinnamomum zeylanicum Nees, syn. C. verum J.S.Presl. (Lauraceae) 3.2. Clove, Syzyngium aromaticum L syn. Eugenia caryophyllata Thunb. (Myrtaceae) 3.3. Ginger, Zingiber officinale Roscoe (Zingiberaceae) 3.4. Pepper, Piper nigrum L. (Piperaceae) Glossary Bibliography Biographical Sketch Summary In ancient times no sharp distinction was made between flavoring plants, spices, medicinal plants and sacrificial species. In the past, spices were very valuable articles of exchange, for many countries they assured a source of wealth and richness. Today, spices are lower in price, but they are essential of foods to any type of nation. In addition to synthetic aromatic compounds, spices from natural resources have increasing importance again. UNESCO – EOLSS The majority of spices not only add flavor and aroma to our foods, but contribute to their preservationSAMPLE and nutritive value. Although CHAPTERS the flavoring role of spices in our food cannot be separated from their other (curing, antimicrobal, antioxidant, etc.) actions, in this article we try to introduce some of the most important plants selected according to their importance as condiments. -
Evaluation of Sacred Lotus (Nelumbo Nucifera Gaertn.) As an Alternative Crop for Phyto-Remediation by Warner Steve Orozco Oband
Evaluation of Sacred Lotus (Nelumbo nucifera Gaertn.) as an Alternative Crop for Phyto-remediation by Warner Steve Orozco Obando A dissertation submitted to the Graduate Faculty of Auburn University in partial fulfillment of the requirements for the Degree of Doctor of Philosophy Auburn, Alabama May 6, 2012 Keywords: Aquaponics, Heavy Metals, Constructed Wetlands, CWs Copyright 2012 by Warner Orozco Obando Approved by Kenneth M. Tilt, Chair, Professor of Horticulture Floyd M. Woods, Co-chair, Associate Professor of Horticulture Fenny Dane, Professor of Horticulture J. Raymond Kessler, Professor of Horticulture Jeff L. Sibley, Professor of Horticulture Wheeler G. Foshee III, Associate Professor of Horticulture Abstract Lotus, Nelumbo nucifera, offers a wide diversity of uses as ornamental, edible and medicinal plant. An opportunity for growing lotus as a crop in Alabama also has the potential for phyto-remediation. Lotus was evaluated for remediation of trace elements focusing on manganese (Mn), organic compounds targeting s-metolachlor and filtering aquaculture waste water. Lotus was evaluated for filtering trace elements by establishing a base line for tissue composition and evaluating lotus capacity to grow in solutions with high levels of Mn (0, 5, 10, 15, or 50 mg/L). Increasing Mn concentrations in solution induced a linear increase in lotus Mn leaf concentrations. Hyper-accumulation of Al and Fe was detected in the rhizomes, while Na hyper-accumulated in the petioles, all without visible signs of toxicity. Mn treatments applied to lotus affected chlorophyll content. For example, chlorophyll a content increased linearly over time while chlorophyll b decreased. Radical scavenging activity (DPPH) did not change over time but correlated with total phenols content, showing a linear decrease after 6 weeks of treatment.