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Diversity of Polyporales in the Malay Peninsular and the Application of Ganoderma Australe (Fr.) Pat
DIVERSITY OF POLYPORALES IN THE MALAY PENINSULAR AND THE APPLICATION OF GANODERMA AUSTRALE (FR.) PAT. IN BIOPULPING OF EMPTY FRUIT BUNCHES OF ELAEIS GUINEENSIS MOHAMAD HASNUL BIN BOLHASSAN FACULTY OF SCIENCE UNIVERSITY OF MALAYA KUALA LUMPUR 2013 DIVERSITY OF POLYPORALES IN THE MALAY PENINSULAR AND THE APPLICATION OF GANODERMA AUSTRALE (FR.) PAT. IN BIOPULPING OF EMPTY FRUIT BUNCHES OF ELAEIS GUINEENSIS MOHAMAD HASNUL BIN BOLHASSAN THESIS SUBMITTED IN FULFILMENT OF THE REQUIREMENTS FOR THE DEGREE OF DOCTOR OF PHILOSOPHY INSTITUTE OF BIOLOGICAL SCIENCES FACULTY OF SCIENCE UNIVERSITY OF MALAYA KUALA LUMPUR 2013 UNIVERSITI MALAYA ORIGINAL LITERARY WORK DECLARATION Name of Candidate: MOHAMAD HASNUL BIN BOLHASSAN (I.C No: 830416-13-5439) Registration/Matric No: SHC080030 Name of Degree: DOCTOR OF PHILOSOPHY Title of Project Paper/Research Report/Disertation/Thesis (“this Work”): DIVERSITY OF POLYPORALES IN THE MALAY PENINSULAR AND THE APPLICATION OF GANODERMA AUSTRALE (FR.) PAT. IN BIOPULPING OF EMPTY FRUIT BUNCHES OF ELAEIS GUINEENSIS. Field of Study: MUSHROOM DIVERSITY AND BIOTECHNOLOGY I do solemnly and sincerely declare that: 1) I am the sole author/writer of this work; 2) This Work is original; 3) Any use of any work in which copyright exists was done by way of fair dealing and for permitted purposes and any excerpt or extract from, or reference to or reproduction of any copyright work has been disclosed expressly and sufficiently and the title of the Work and its authorship have been acknowledge in this Work; 4) I do not have any actual -
Molecular Phylogeny of Laetiporus and Other Brown Rot Polypore Genera in North America
Mycologia, 100(3), 2008, pp. 417–430. DOI: 10.3852/07-124R2 # 2008 by The Mycological Society of America, Lawrence, KS 66044-8897 Molecular phylogeny of Laetiporus and other brown rot polypore genera in North America Daniel L. Lindner1 Key words: evolution, Fungi, Macrohyporia, Mark T. Banik Polyporaceae, Poria, root rot, sulfur shelf, Wolfiporia U.S.D.A. Forest Service, Madison Field Office of the extensa Northern Research Station, Center for Forest Mycology Research, One Gifford Pinchot Drive, Madison, Wisconsin 53726 INTRODUCTION The genera Laetiporus Murrill, Leptoporus Que´l., Phaeolus (Pat.) Pat., Pycnoporellus Murrill and Wolfi- Abstract: Phylogenetic relationships were investigat- poria Ryvarden & Gilb. contain species that possess ed among North American species of Laetiporus, simple septate hyphae, cause brown rots and produce Leptoporus, Phaeolus, Pycnoporellus and Wolfiporia annual, polyporoid fruiting bodies with hyaline using ITS, nuclear large subunit and mitochondrial spores. These shared morphological and physiologi- small subunit rDNA sequences. Members of these cal characters have been considered important in genera have poroid hymenophores, simple septate traditional polypore taxonomy (e.g. Gilbertson and hyphae and cause brown rots in a variety of substrates. Ryvarden 1986, Gilbertson and Ryvarden 1987, Analyses indicate that Laetiporus and Wolfiporia are Ryvarden 1991). However recent molecular work not monophyletic. All North American Laetiporus indicates that Laetiporus, Phaeolus and Pycnoporellus species formed a well supported monophyletic group fall within the ‘‘Antrodia clade’’ of true polypores (the ‘‘core Laetiporus clade’’ or Laetiporus s.s.) with identified by Hibbett and Donoghue (2001) while the exception of L. persicinus, which showed little Leptoporus and Wolfiporia fall respectively within the affinity for any genus for which sequence data are ‘‘phlebioid’’ and ‘‘core polyporoid’’ clades of true available. -
Mycomedicine: a Unique Class of Natural Products with Potent Anti-Tumour Bioactivities
molecules Review Mycomedicine: A Unique Class of Natural Products with Potent Anti-tumour Bioactivities Rongchen Dai 1,†, Mengfan Liu 1,†, Wan Najbah Nik Nabil 1,2 , Zhichao Xi 1,* and Hongxi Xu 3,* 1 School of Pharmacy, Shanghai University of Traditional Chinese Medicine, Shanghai 201203, China; [email protected] (R.D.); [email protected] (M.L.); [email protected] (W.N.N.N.) 2 Pharmaceutical Services Program, Ministry of Health, Selangor 46200, Malaysia 3 Shuguang Hospital, Shanghai University of Traditional Chinese Medicine, Shanghai 201203, China * Correspondence: [email protected] (Z.X.); [email protected] (H.X) † These authors contributed equally to this work. Abstract: Mycomedicine is a unique class of natural medicine that has been widely used in Asian countries for thousands of years. Modern mycomedicine consists of fruiting bodies, spores, or other tissues of medicinal fungi, as well as bioactive components extracted from them, including polysaccha- rides and, triterpenoids, etc. Since the discovery of the famous fungal extract, penicillin, by Alexander Fleming in the late 19th century, researchers have realised the significant antibiotic and other medic- inal values of fungal extracts. As medicinal fungi and fungal metabolites can induce apoptosis or autophagy, enhance the immune response, and reduce metastatic potential, several types of mush- rooms, such as Ganoderma lucidum and Grifola frondosa, have been extensively investigated, and anti- cancer drugs have been developed from their extracts. Although some studies have highlighted the anti-cancer properties of a single, specific mushroom, only limited reviews have summarised diverse medicinal fungi as mycomedicine. In this review, we not only list the structures and functions of pharmaceutically active components isolated from mycomedicine, but also summarise the mecha- Citation: Dai, R.; Liu, M.; Nik Nabil, W.N.; Xi, Z.; Xu, H. -
A Phylogenetic Overview of the Antrodia Clade (Basidiomycota, Polyporales)
Mycologia, 105(6), 2013, pp. 1391–1411. DOI: 10.3852/13-051 # 2013 by The Mycological Society of America, Lawrence, KS 66044-8897 A phylogenetic overview of the antrodia clade (Basidiomycota, Polyporales) Beatriz Ortiz-Santana1 phylogenetic studies also have recognized the genera Daniel L. Lindner Amylocystis, Dacryobolus, Melanoporia, Pycnoporellus, US Forest Service, Northern Research Station, Center for Sarcoporia and Wolfiporia as part of the antrodia clade Forest Mycology Research, One Gifford Pinchot Drive, (SY Kim and Jung 2000, 2001; Binder and Hibbett Madison, Wisconsin 53726 2002; Hibbett and Binder 2002; SY Kim et al. 2003; Otto Miettinen Binder et al. 2005), while the genera Antrodia, Botanical Museum, University of Helsinki, PO Box 7, Daedalea, Fomitopsis, Laetiporus and Sparassis have 00014, Helsinki, Finland received attention in regard to species delimitation (SY Kim et al. 2001, 2003; KM Kim et al. 2005, 2007; Alfredo Justo Desjardin et al. 2004; Wang et al. 2004; Wu et al. 2004; David S. Hibbett Dai et al. 2006; Blanco-Dios et al. 2006; Chiu 2007; Clark University, Biology Department, 950 Main Street, Worcester, Massachusetts 01610 Lindner and Banik 2008; Yu et al. 2010; Banik et al. 2010, 2012; Garcia-Sandoval et al. 2011; Lindner et al. 2011; Rajchenberg et al. 2011; Zhou and Wei 2012; Abstract: Phylogenetic relationships among mem- Bernicchia et al. 2012; Spirin et al. 2012, 2013). These bers of the antrodia clade were investigated with studies also established that some of the genera are molecular data from two nuclear ribosomal DNA not monophyletic and several modifications have regions, LSU and ITS. A total of 123 species been proposed: the segregation of Antrodia s.l. -
ISMM NEWSLETTER, Volume 1, Issue 8, Date Released:2017-12-18
Volume 1, Issue 8 Date-released: December 18, 2017 News reports - The 9th International Medicinal Mushrooms Conference (IMMC9) - The 11th Chinese Mushroom Festival held in Zhangzhou Up-coming events - First Circular of the First Chinese (Gutian) Rare Mushroom Conference - Welcome to International Mycological Congress (IMC) 11 Research progress - New Researches - Recommendation of Book--Edible and Medicinal Mushrooms Technology and Applications, Edited by Diego Cunha Zied and Arturo Pardo-Gimenez Points and Reviews - Medicinal Mushrooms (Part III), by Jure Pohleven, Tamara Korošec, Andrej Gregori - Medicinal Mushrooms in Human Clinical Studies. Part I. Anticancer, Oncoimmunological, and Immunomodulatory Activities: A Review (Part I), by Solomon P. Wasser Call for Papers Contact information Issue Editor- Mr. Ziqiang Liu [email protected] Department of Edible Mushrooms, CFNA, 4/F, Talent International Building No. 80 Guangqumennei Street, Dongcheng District, Beijing 10062, China News Reports The 9th International Medicinal Mushrooms Conference (IMMC9), September 24-28, 2017, Palermo, Italy Maria Letizia Gargano1& Giuseppe Venturella2 1Department of Earth and Maine Science, University of Palermo, Bld. 16, I-90128 Palermo (Italy); 2Department of Agricultural, Food and Forest Sciences, University of Palermo, Bld. 5, I-90128 Palermo (Italy) In September 2017 over 200 delegates from 49 different countries (Fig. 1) gathered in Splendid Hotel La Torre, Mondello (Palermo, Italy), for the 9th International Medicinal Mushrooms Conference. IMMC9 in Palermo was the first to be held in Italy. The theme to the Conference was “Advances in Medicinal Mushroom Science: Building Bridges between Western and Eastern Medicine”. IMMC9 participants had the opportunity to discuss and share scientific innovations in the medicinal mushroom sector and to become aware of current research results. -
Notes, Outline and Divergence Times of Basidiomycota
Fungal Diversity (2019) 99:105–367 https://doi.org/10.1007/s13225-019-00435-4 (0123456789().,-volV)(0123456789().,- volV) Notes, outline and divergence times of Basidiomycota 1,2,3 1,4 3 5 5 Mao-Qiang He • Rui-Lin Zhao • Kevin D. Hyde • Dominik Begerow • Martin Kemler • 6 7 8,9 10 11 Andrey Yurkov • Eric H. C. McKenzie • Olivier Raspe´ • Makoto Kakishima • Santiago Sa´nchez-Ramı´rez • 12 13 14 15 16 Else C. Vellinga • Roy Halling • Viktor Papp • Ivan V. Zmitrovich • Bart Buyck • 8,9 3 17 18 1 Damien Ertz • Nalin N. Wijayawardene • Bao-Kai Cui • Nathan Schoutteten • Xin-Zhan Liu • 19 1 1,3 1 1 1 Tai-Hui Li • Yi-Jian Yao • Xin-Yu Zhu • An-Qi Liu • Guo-Jie Li • Ming-Zhe Zhang • 1 1 20 21,22 23 Zhi-Lin Ling • Bin Cao • Vladimı´r Antonı´n • Teun Boekhout • Bianca Denise Barbosa da Silva • 18 24 25 26 27 Eske De Crop • Cony Decock • Ba´lint Dima • Arun Kumar Dutta • Jack W. Fell • 28 29 30 31 Jo´ zsef Geml • Masoomeh Ghobad-Nejhad • Admir J. Giachini • Tatiana B. Gibertoni • 32 33,34 17 35 Sergio P. Gorjo´ n • Danny Haelewaters • Shuang-Hui He • Brendan P. Hodkinson • 36 37 38 39 40,41 Egon Horak • Tamotsu Hoshino • Alfredo Justo • Young Woon Lim • Nelson Menolli Jr. • 42 43,44 45 46 47 Armin Mesˇic´ • Jean-Marc Moncalvo • Gregory M. Mueller • La´szlo´ G. Nagy • R. Henrik Nilsson • 48 48 49 2 Machiel Noordeloos • Jorinde Nuytinck • Takamichi Orihara • Cheewangkoon Ratchadawan • 50,51 52 53 Mario Rajchenberg • Alexandre G. -
Pat. in Biopulping of Empty Fruit Bunches of Elaeis Guineensis
DIVERSITY OF POLYPORALES AND THE APPLICATION OF GANODERMA AUSTRALE (FR.) PAT. IN BIOPULPING OF EMPTY FRUIT BUNCHES OF ELAEIS GUINEENSIS MOHAMAD HASNUL BIN BOLHASSAN THESIS SUBMITTED IN FULFILMENT OF THE REQUIREMENTS FOR THE DEGREE OF DOCTOR OF PHILOSOPHY FACULTY OF SCIENCE UNIVERSITY OF MALAYA KUALA LUMPUR 2012 ABSTRACT Diversity and distribution of Polyporales in Malaysia was investigated by collecting basidiocarps from trunks, branches, exposed roots and soil from six states (Johore, Kedah, Kelantan, Negeri Sembilan, Pahang and Selangor) in Peninsular Malaysia and Federal Territory Kuala Lumpur. The morphological study of 99 basidiomata collected from 2006 till 2007 and 241 herbarium specimens collected from 2003 - 2005 were undertaken. Sixty species belonging to five families: Fomitopsidaceae, Ganodermataceae, Meruliaceae, Meripilaceae and Polyporaceae were recorded. Polyporaceae was the dominant family with 46 species identified. The common species encountered based on the number of basidiocarps collected were Ganoderma australe followed by Lentinus squarrosulus, Earliella scabrosa, Pycnoporus sanguineus, Lentinus connatus, Microporus xanthopus, Trametes menziesii, Lenzites elegans, Lentinus sajor-caju and Microporus affinis. Eighteen genera with only one specie were also recorded i.e. Daedalea, Amauroderma, Flavodon, Earliella, Echinochaetae, Favolus, Flabellophora, Fomitella, Funalia, Hexagonia, Lignosus, Macrohyporia, Microporellus, Nigroporus, Panus, Perenniporia, Pseudofavolus and Pyrofomes. This study shows that strains of the G. lucidum and G. australe can be identified by 650 base pair nucleic acid sequence characters from ITS1, 5.8S rDNA and ITS2 region on the ribosomal DNA. The phylogenetic analysis used maximum-parsimony as the optimality criterion and heuristic searches used 100 replicates of random addition sequences with tree-bisection-reconnection (TBR) branch-swaping. ITS phylogeny confirms that G. -
Genera of Corticioid Fungi: Keys, Nomenclature and Taxonomy Article
Studies in Fungi 5(1): 125–309 (2020) www.studiesinfungi.org ISSN 2465-4973 Article Doi 10.5943/sif/5/1/12 Genera of corticioid fungi: keys, nomenclature and taxonomy Gorjón SP BIOCONS – Department of Botany and Plant Physiology, University of Salamanca, 37007 Salamanca, Spain Gorjón SP 2020 – Genera of corticioid fungi: keys, nomenclature, and taxonomy. Studies in Fungi 5(1), 125–309, Doi 10.5943/sif/5/1/12 Abstract A review of the worldwide corticioid homobasidiomycetes genera is presented. A total of 620 genera are considered with comments on their taxonomy and nomenclature. Of them, about 420 are accepted and keyed out, described in detail with remarks on their taxonomy and systematics. Key words – Corticiaceae – Crust fungi – Diversity – Homobasidiomycetes Introduction Corticioid fungi are a diverse and heterogeneous group of fungi mainly referred to basidiomycete fungi in which basidiomes are generally resupinate. Basidiome construction is often simple, and in most cases, only generative hyphae are found. In more structured basidiomes, those with a reflexed margin or with a pileate surface, more or less sclerified hyphae are usually found. Even the basidiome structure is apparently not very complex, hymenophore configuration should be highly variable finding smooth surfaces or different variations to increase the spore production area such as rugose, tuberculate, aculeate, merulioid, folded, or poroid hymenial surfaces. It is often thought that corticioid fungi produce unattractive and little variable forms and, in most cases, they go unnoticed by most mycologists as ungraceful forms that ‘cover sticks and look like a paint stain’. Although the macroscopic variability compared to other fungi is, but not always, usually limited, under the microscope they surprise with a great diversity of forms of basidia, cystidia, spores and other microscopic elements (Hjortstam et al. -
Brief Review: Lignocellulolytic Enzymes from Polypores for Efficient Utilization of Biomass
Mycosphere 9(6): 1073–1088 (2018) www.mycosphere.org ISSN 2077 7019 Article Doi 10.5943/mycosphere/9/6/2 Brief review: lignocellulolytic enzymes from polypores for efficient utilization of biomass Nguyen KA, Wikee S and Lumyong S* Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai 50200, Thailand Nguyen KA, Wikee S, Lumyong S 2018 – Brief review: Lignocellulolytic enzymes from Polypores for efficient utilization of biomass. Mycosphere 9(6), 1073–1088, Doi 10.5943/mycosphere/9/6/2 Abstract Polypores are a group of diverse macrofungi that belong to phylum Basidiomycota (Basidiomycetes). The ability of polypores to produce enzymes has attracted the attention of scientists. These enzymes are increasingly being used for many industrial purposes, e.g. textile, pulp and paper, food, detergents and animal feeds. However, their expensive of production is the main hindrance to their use. Fortunately, most polypores can decompose cellulose, hemicellulose, and lignin in the plant cell walls. Solid state fermentation is a good method to degrade lignocellulose and to produce enzymes at low cost since residual agro-industrial waste can be used as the substrate for microorganism growth. Every day large amounts of residues and waste materials are lodged into the environment by industry, agriculture, and other ways leading to environmental problems. The present paper explores the isolation of polypore fungi and their production of lignocellulolytic enzymes, taking full advantage of various agro-industrial wastes as substrate. Key words – Agro-industrial wastes – Cellulolytic – Fermentation – Fungi – Ligninolytic Introduction Enzymes are proteins that are produced by living cells. They are catalysts which control biochemical processes (Robinson 2015). -
Of Himachal Pradesh I.B
Journal on New Biological Reports 2(2): 71-98 (2013) ISSN 2319 – 1104 (Online) A Checklist of Wood Rotting Fungi (non-gilled Agaricomycotina) of Himachal Pradesh I.B. Prasher* & Deepali Ashok Department of Botany, Punjab University, Chandigarh-1600014, India (Received on: 17 April, 2013; accepted on: 11 May, 2013) ABSTRACT Three hundred fifty five species of wood rotting fungi (non-gilled Agaricomycotina) are being recorded from state of Himachal Pradesh. These belong to 37 families spreading over 133 genera. These are recorded from 8 districts (Chamba, Kangra, Kinnaur, Kullu, Shimla, Solan, Bilaspur, and Mandi) of the study area. District Bilaspur and Mandi of Himachal Pradesh have been surveyed for the first time. Key Words: Wood rotting fungi, Agaricomycotina (non- gilled), Himachal Pradesh, North Western Himalayas. INTRODUCTION Wood rotting basidiomycetes include both gilled 2010, 2010a, 2010b, 2010c), Prasher et.al. (2011, and non-gilled fungi. The non-gilled 2012), etc. agaricomycotina includes members belonging to Polyporaceae and those belonging to Corticiaceae. MATERIALS AND METHODS These fungi degrade the wood chiefly by acting on cellulose and lignin through their enzyme system The data provided in this communication is based and have been classified as white rot or brown rot on the examination of the collections made by us as causing fungi. White rot fungi degrade lignin and well as collected by the previous workers and cellulose both, leaving white residue and brown rot deposited in the Herbarium of Botany Department, fungi which degrade only cellulose. White rot Panjab University, Chandigarh (PAN), India. The fungi account for 94% of the total known observations are based on the fresh as well as dry basidiomycetous fungi where as only 6% are brown specimens and those preserved in Formaldehyde, rot fungi (Gilbertson, 1980). -
Of Uttarakhand I.B
Journal on New Biological Reports 2(2): 108-123 (2013) ISSN 2319 – 1104 (Online) A Checklist of Wood rotting fungi (non-gilled Agaricomycotina) of Uttarakhand I.B. Prasher* & Lalita Department of Botany, Punjab University, Chandigarh-1600014, India (Received on: 17 April, 2013; accepted on : l6 May, 2013) ABSTRACT Two hundred species of wood rotting non-gilled Agaricomycotina are being recorded from state of Uttarakhand (North Western Himalayas), India. These belong to 27 families spreading over 100 genera. These are recorded from various regions viz.: Dehradun, Mussoorie, Nainital, Rishikesh, Chamoli, Nanda Devi Biosphere Reserve, Uttarkashi, Hemkunt and Chakrata of study area. This constitutes the first consolidated account of these fungi from Uttarakhand state (N. W. Himalayas). Key Words: Non-gilled Agaricomycotina, wood-rot, fungi, Uttarakhand. INTRODUCTION Wood is decomposed by fungi through several Study Area types of rot (Rypá ček 1957; Rypá ček 1966; Schwarze et al. 2000; Martínez et al . 2005). Some The state of Uttarakhand extends between 28 °C of these can be distinguished in the field according 43’N to 31 °C 27’N latitude and 77 °C 34’E to 81 0C to their features in suitable decay stages to the 02’E altitude. It is one of five states of the Indian genus or species level, e.g. Armillaria spp., Union which are a part of the N.W. Himalayan Phellinus nigrolimitatus , Fomitopsis pinicola region. The region of Uttarakhand has a total area (Ryvarden and Gilbertson 1993, 1994) . Woody of 53,566 km² and is covered by mountains tissues are degraded by fungi, and these wood- (approximately 93%) and forests show up on about decay fungi fall into three types according to their 64% of the mountains. -
Phylogeny and Taxonomy of Ceriporia and Other Related Taxa and Description of Three New Species
Mycologia ISSN: 0027-5514 (Print) 1557-2536 (Online) Journal homepage: https://www.tandfonline.com/loi/umyc20 Phylogeny and taxonomy of Ceriporia and other related taxa and description of three new species Che-Chih Chen, Chi-Yu Chen, Young Woon Lim & Sheng-Hua Wu To cite this article: Che-Chih Chen, Chi-Yu Chen, Young Woon Lim & Sheng-Hua Wu (2020) Phylogeny and taxonomy of Ceriporia and other related taxa and description of three new species, Mycologia, 112:1, 64-82, DOI: 10.1080/00275514.2019.1664097 To link to this article: https://doi.org/10.1080/00275514.2019.1664097 View supplementary material Published online: 06 Jan 2020. Submit your article to this journal Article views: 266 View related articles View Crossmark data Full Terms & Conditions of access and use can be found at https://www.tandfonline.com/action/journalInformation?journalCode=umyc20 MYCOLOGIA 2020, VOL. 112, NO. 1, 64–82 https://doi.org/10.1080/00275514.2019.1664097 Phylogeny and taxonomy of Ceriporia and other related taxa and description of three new species Che-Chih Chen a, Chi-Yu Chen a, Young Woon Lim b, and Sheng-Hua Wu a,c aDepartment of Plant Pathology, National Chung Hsing University, Taichung 40227, Taiwan; bSchool of Biological Sciences and Institute of Microbiology, Seoul National University, Seoul 08826, Republic of Korea; cDepartment of Biology, National Museum of Natural Science, Taichung 40419, Taiwan ABSTRACT ARTICLE HISTORY Species of Ceriporia (Irpicaceae, Basidiomycota) are saprotrophs or endophytes in forest ecosys- Received 18 June 2019 tems. To evaluate the taxonomy and generic relationships of Ceriporia and other related taxa, we Accepted 3 September 2019 used morphology and multigene phylogenetic analyses based on sequence data from nuc rDNA KEYWORDS internal transcribed spacer ITS1-5.8S-ITS2 (ITS) region, nuc 28S rDNA (28S), and RNA polymerase II Leptoporus; phlebioid clade; largest subunit (rpb1).