Castanea Mollissima Blume): the Roots of Nut Tree Domestication
ORIGINAL RESEARCH published: 25 June 2018 doi: 10.3389/fpls.2018.00810 Signatures of Selection in the Genomes of Chinese Chestnut (Castanea mollissima Blume): The Roots of Nut Tree Domestication Nicholas R. LaBonte 1*, Peng Zhao 2 and Keith Woeste 3 1 Department of Crop Sciences, University of Illinois Urbana-Champaign, Urbana, IL, United States, 2 Key Laboratory of Resource Biology and Biotechnology in Western China, Ministry of Education, College of Life Sciences, Northwest University, Xi’an, China, 3 Hardwood Tree Improvement and Regeneration Center, Northern Research Station, USDA Forest Service, West Lafayette, IN, United States Chestnuts (Castanea) are major nut crops in East Asia and southern Europe, and are unique among temperate nut crops in that the harvested seeds are starchy rather than oily. Chestnut species have been cultivated for three millennia or more in China, so it is likely that artificial selection has affected the genome of orchard-grown chestnuts. The genetics of Chinese chestnut (Castanea mollissima Blume) domestication are also of Edited by: interest to breeders of hybrid American chestnut, especially if the low-growing, branching S. Hong Lee, habit of Chinese chestnut, an impediment to American chestnut restoration, is partly University of South Australia, Australia the result of artificial selection. We resequenced genomes of wild and orchard-derived Reviewed by: Guo-Bo Chen, Chinese chestnuts and identified selective sweeps based on pooled whole-genome SNP Zhejiang Provincial People’s Hospital, datasets. We present candidate gene loci for chestnut domestication and discuss the China potential phenotypic effects of candidate loci, some of which may be useful genes for Chaeyoung Lee, Soongsil University, South Korea chestnut improvement in Asia and North America.
[Show full text]