RTK-RAS-MAPK Modulators As New Therapeutic Targets

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RTK-RAS-MAPK Modulators As New Therapeutic Targets biomolecules Commentary Spotlight on Accessory Proteins: RTK-RAS-MAPK Modulators as New Therapeutic Targets Silke Pudewell and Mohammad Reza Ahmadian * Institute of Biochemistry and Molecular Biology II, Medical Faculty, Heinrich-Heine University, 40225 Düsseldorf, Germany; [email protected] * Correspondence: [email protected] Abstract: The RTK-RAS-MAPK axis is one of the most extensively studied signaling cascades and is related to the development of both cancers and RASopathies. In the last 30 years, many ideas and approaches have emerged for directly targeting constituent members of this cascade, predominantly in the context of cancer treatment. These approaches are still insufficient due to undesirable drug toxicity, resistance, and low efficacy. Significant advances have been made in understanding the spatiotemporal features of the constituent members of the RTK-RAS-MAPK axis, which are linked and modulated by many accessory proteins. Given that the majority of such modulators are now emerging as attractive therapeutic targets, a very small number of accessory inhibitors have yet to be discovered. Keywords: adaptor proteins; anchoring proteins; docking proteins; KRAS; scaffold proteins; RAF kinase; RTK; MEK; ERK Citation: Pudewell, S.; Ahmadian, External signals are sensed, integrated, and amplified by conserved signaling cassettes. M.R. Spotlight on Accessory Proteins: The activation of the RTK-RAS-MAPK signaling cascade is regulated by several different RTK-RAS-MAPK Modulators as New extracellular signals and intracellular proteins. Growth factors activate receptor tyrosine Therapeutic Targets. Biomolecules kinases (RTKs) at the plasma membrane, which in turn activate RAS via the GDP/GTP 2021, 11, 895. https://doi.org/ exchange reaction. These reactions are catalyzed by guanosine exchange factors (GEFs), 10.3390/biom11060895 such as SOS1 (son of sevenless 1). GTP-bound RAS initiates RAF dimerization and in- duces the phosphorylation cascade towards MEK and ERK [1]. Aberrant regulation or Academic Editor: Daniel Abankwa hyperactivation of the pathway leads to cancer and a group of developmental disorders with a mild gain-of-function of the RAS-MAPK pathway, which are collectively called Received: 10 May 2021 RASopathies [2,3]. Accepted: 15 June 2021 Targeting the constituent components of the RTK-RAS-MAPK signaling cascade often Published: 16 June 2021 leads to high toxicity and activation of backup mechanisms, lowering the treatment effi- cacy and increasing the burden of the therapy. In this context, we have to consider that Publisher’s Note: MDPI stays neutral RASopathies are caused by germline mutations, therefore, most patients are children. with regard to jurisdictional claims in Here, we highlight a group of proteins named “accessory proteins”, which are emerg- published maps and institutional affil- ing as new potential therapeutic targets for the treatment of RAS-MAPK-related diseases. iations. These proteins orchestrate the assembly and spatiotemporal localization of the constituent members of the cascade, without being part of the signaling pathway themselves [4]. Acces- sory proteins can be categorized into four distinct subgroups (see Figure1): (1) anchoring proteins that bind to the membrane and other effectors (mostly kinases); (2) docking pro- Copyright: © 2021 by the authors. teins that bind to receptors (e.g., RTKs and GPCRs) and more than one effector; (3) adaptor Licensee MDPI, Basel, Switzerland. proteins that simply link two signaling components (e.g., receptor and GEF); and (4) scaf- This article is an open access article fold proteins that bind two or more partners and provide a signaling platform. distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https:// creativecommons.org/licenses/by/ 4.0/). Biomolecules 2021, 11, 895. https://doi.org/10.3390/biom11060895 https://www.mdpi.com/journal/biomolecules Biomolecules 2021, 11, 895 2 of 4 Biomolecules 2021, 11, x FOR PEER REVIEW 2 of 4 Figure 1. AccessoryAccessory proteins proteins can can be be divided divided into into at atleast least four four subgroups: subgroups: anchoring, anchoring, docking, docking, adaptor, adaptor, and scaffold and scaffold pro- teins. All groups include several different binders of the RTK-RAS-MAPK signaling pathway, such as RAF, MEK, and/or proteins. All groups include several different binders of the RTK-RAS-MAPK signaling pathway, such as RAF, MEK, and/or ERK, and often share common domains. Anchoring proteins include membrane-associated domains, such as pleckstrin ERK, and often share common domains. Anchoring proteins include membrane-associated domains, such as pleckstrin homology (PH) and transmembrane (TM) domains or a posttranslational modification, (e.g., myristoylation in FLOT2) to determinehomology a (PH) special and subcellular transmembrane localization (TM) domains and increase or a posttranslationalthe dwell time of the modification, proteins at (e.g., the membrane. myristoylation Docking in FLOT2) proteins to connectdetermine receptors a special with subcellular downstream localization effectors and and increase feature the recept dwellor binding time ofthe domains, proteins such at the as PTBs membrane. (phosphotyrosine Docking proteins bind- ingconnect domains). receptors FRS2, with for downstream example, interact effectorss with and featurethe FGFR receptor (fibroblast binding growth domains, fact suchor receptor) as PTBs and (phosphotyrosine links activated binding RTKs (receptordomains). tyrosine FRS2, for kinases) example, with interacts adaptor with proteins the FGFR such (fibroblast as GRB2 and growth SHC, factor and receptor)with other and effe linksctors, activated such as SOS1. RTKs (receptorAdaptor proteinstyrosine kinases)can simply with connect adaptor two proteins proteins such and asoften GRB2 exhibit and SH SHC, (SRC and homology) with other 2 effectors, and SH3 suchdomains. as SOS1. GRB2 Adaptor is a well-known proteins adaptorcan simply protein connect of RTKs two proteins and SOS1 and but often can exhibitalso, as SH mentioned (SRC homology) before, bind 2 and to SH3other domains. accessor GRB2y proteins is a well-known and RTKs and adaptor fine- proteintune the of signaling RTKs and machinery SOS1 but an cand the also, cross-talk as mentioned of different before, pathways. bind to other Scaffold accessory proteins proteins can simultaneously and RTKs and fine-tunebind several the signaling components. They can contribute to clustering events by oligomerization via special domains or intrinsically signaling machinery and the cross-talk of different pathways. Scaffold proteins can simultaneously bind several signaling disordered regions (such as galectin 1 and 3), recruit proteins to the site of action (such as SPRED1), or determine RAS components. They can contribute to clustering events by oligomerization via special domains or intrinsically disordered signaling at a specific subcellular localization (such as MP1, which binds MEK1 and ERK1 on late endosomes). Scaffold proteinsregions (such are also as galectinable to bind 1 and ot 3),her recruit accessory proteins proteins to the and site allow of action tight (suchcontrol as of SPRED1), the RAS-MAPK or determine pathway. RAS signaling at a specific subcellular localization (such as MP1, which binds MEK1 and ERK1 on late endosomes). Scaffold proteins are also able to bind other accessory proteinsAs modulators and allow tight of the control RTK-RAS-MAPK of the RAS-MAPK axis pathway., accessory proteins are multidomain pro- teins that bind several interaction partners and connect them as a functional unit. Accord- As modulators of the RTK-RAS-MAPK axis, accessory proteins are multidomain ingly, they contribute to liquid–liquid phase separation (LLPS) events, which are crucial proteins that bind several interaction partners and connect them as a functional unit. for a directed assembly of the respective signaling machinery[5,6]. Furthermore, they can Accordingly, they contribute to liquid–liquid phase separation (LLPS) events, which are fine-tune the crosstalk between signaling pathways, increase the dwell time of proteins crucial for a directed assembly of the respective signaling machinery [5,6]. Furthermore, on the membrane, induce nanoclustering, sequester effectors, and shield them from acti- they can fine-tune the crosstalk between signaling pathways, increase the dwell time of vation, or determine the cell type specificity and subcellular localization of signaling cas- proteins on the membrane, induce nanoclustering, sequester effectors, and shield them from settes [7]. These modulating abilities turn accessory proteins into incredibly flexible and activation, or determine the cell type specificity and subcellular localization of signaling importantcassettes [ 7proteins]. These within modulating a very abilitiesspecific contex turn accessoryt. In fact, proteinsit is easy intoto understand incredibly why flexible the dysregulationand important of proteins accessory within proteins a very not specific only leads context. to cancer In fact, development it is easy to understand and cancer whypro- gressionthe dysregulation in RAS-mutant of accessory tumors proteins but also not contributes only leads to toRASopathies. cancer development and cancer progressionThe last in30 RAS-mutant years of research tumors have but led also to contributessignificant discoveries to RASopathies. and improvements in cancerThe treatment, last 30 years but new of research therapeutic have ledapproa to
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