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Anthropogenic Impacts on Waituna Lagoon: Reconstructing The
i Anthropogenic impacts on Waituna Lagoon: Reconstructing the environmental history Sarai Cosgrove 2011 A dissertation submitted in partial fulfilment of the requirements for a Master of Science degree in Ecology at the University of Otago, Dunedin, New Zealand ii iii Abstract Waituna Lagoon is a shallow temperate coastal lagoon in Southland, New Zealand. The 1,350 hectare Waituna Lagoon and associated wetland system is of national and international importance for its unique ecology and the cultural values placed upon it. Waituna is opened to the sea ca. 1-2 times annually, during which time it becomes estuarine. This opening regime has been artificially managed since 1908, with an unknown impact on the lagoon. Since 2007, Waituna appears to have experienced rapid degradation and eutrophication, possibly due to intensification of farming in its catchment. It has rare, extensive beds of the seagrasses Ruppia megacarpa and Ruppia polycarpa, which have been lost from many similar systems due to eutrophication and sedimentation. Waituna Lagoon is currently under active management to preserve its unique ecology, and its restoration to a more natural state is being considered. This study aims to reconstruct Waituna Lagoon’s natural opening regime and Ruppia dynamics, as understanding the natural ecosystem is important for restoration. The hypotheses are: (1) that under a natural opening regime, environmental variations within Waituna Lagoon were less frequent but more extreme; (2) that Ruppia was not present in Waituna Lagoon under a natural opening regime; and (3) that Ruppia was not dominant in Waituna Lagoon under a natural opening regime. Three push cores (130, 83 and 64 cm length) were collected from the sheltered Shand Bay and from the wind-exposed, deepest site in the main lagoon. -
1 Phylogenetic Regionalization of Marine Plants Reveals Close Evolutionary Affinities Among Disjunct Temperate Assemblages Barna
Phylogenetic regionalization of marine plants reveals close evolutionary affinities among disjunct temperate assemblages Barnabas H. Darua,b,*, Ben G. Holtc, Jean-Philippe Lessardd,e, Kowiyou Yessoufouf and T. Jonathan Daviesg,h aDepartment of Organismic and Evolutionary Biology and Harvard University Herbaria, Harvard University, Cambridge, MA 02138, USA bDepartment of Plant Science, University of Pretoria, Private Bag X20, Hatfield 0028, Pretoria, South Africa cDepartment of Life Sciences, Imperial College London, Silwood Park Campus, Ascot SL5 7PY, United Kingdom dQuebec Centre for Biodiversity Science, Department of Biology, McGill University, Montreal, QC H3A 0G4, Canada eDepartment of Biology, Concordia University, Montreal, QC, H4B 1R6, Canada; fDepartment of Environmental Sciences, University of South Africa, Florida campus, Florida 1710, South Africa gDepartment of Biology, McGill University, Montreal, QC H3A 0G4, Canada hAfrican Centre for DNA Barcoding, University of Johannesburg, PO Box 524, Auckland Park, Johannesburg 2006, South Africa *Corresponding author Email: [email protected] (B.H. Daru) Running head: Phylogenetic regionalization of seagrasses 1 Abstract While our knowledge of species distributions and diversity in the terrestrial biosphere has increased sharply over the last decades, we lack equivalent knowledge of the marine world. Here, we use the phylogenetic tree of seagrasses along with their global distributions and a metric of phylogenetic beta diversity to generate a phylogenetically-based delimitation of marine phytoregions (phyloregions). We then evaluate their evolutionary affinities and explore environmental correlates of phylogenetic turnover between them. We identified 11 phyloregions based on the clustering of phylogenetic beta diversity values. Most phyloregions can be classified as either temperate or tropical, and even geographically disjunct temperate regions can harbor closely related species assemblages. -
Evaluation of the Host Range of Hydrellia Lagarosiphon
Host range tests of Hydrellia lagarosiphon a candidate agent for Lagarosiphon major in New Zealand: assessing the risk to non-target species in New Zealand Jan-Robert Baars (University College Dublin), Quentin Paynter (Landcare Research New Zealand) Materials and Methods Selection of test plants A test plant list for New Zealand (henceforth NZ) (Table 1) was compiled using the centrifugal phylogenetic method (Wapshere, 1974) with amendments, as suggested by Briese and Walker (2002) and Briese (2003). Recent development in phylogenetics for the Hydrocharitaceae and its relation to taxonomically similar plant families were obtained by consulting the Angiosperm Phylogeny Website (Stevens, 2001 onwards; Fig. 1). Figure 1 Phylogeny of the Alismatales obtained from the Angiosperm Phylogeny Website: (Stevens, 2001 onwards) The most recent checklist of native NZ plants (De Lange and Rolfe, 2010) was examined to identify the NZ plant species that are most closely-related to lagarosiphon in order to compile a list of native plants for inclusion in host-range testing. Given that the aquatic lifestyle is a highly specialised one, relying totally on taxonomic position without due consideration of habitat has the potential to result in unsuitable test plants being included in a test list. For example, arthropod herbivores that feed on lagarosiphon are adapted to being submerged in freshwater and we can be sure that the marine eelgrass Zostera muelleri (Zosteriaceae) cannot be a suitable host for an insect herbivore because no insects have followed seagrasses into the ocean (Ollerton and McCollin, 1998). Zostera muelleri was, therefore, excluded from host- range testing. Wolffia australiana was also excluded from host-range testing as the tiny (0.3-1 mm long) platelets are far too small to be at risk of supporting the development of a leaf- mining fly. -
Natural History of the Coorong
Natural History of the Coorong, Lower Lakes, and Murray Mouth Region (yarluwar-ruwe) This book is available as a free fully searchable ebook from www.adelaide.edu.au/press Occasional publications of the Royal Society of South Australia Inc. Ideas & Endeavours: a History of the Natural Sciences in South Australia, published 1986. Natural History of the Adelaide Region, published 1976, reprinted 1988. Natural History of Eyre Peninsula, published 1985. Natural History of the Flinders Ranges, published 1996. Natural History of Kangaroo Island, second edition, published 2002. Natural History of the North East Deserts, published 1990. Natural History of the South East, published 1983, reprinted 1995. Natural History of Gulf St Vincent, published 2008. Natural History of Riverland and Murraylands, published 2009. Natural History of Spencer Gulf, published 2014. Natural History of the Coorong, Lower Lakes, and Murray Mouth Region (yarluwar-ruwe) Editors Luke Mosley, Qifeng Ye, Scoresby Shepherd, Steve Hemming, Rob Fitzpatrick Royal Society of South Australia Inc. Published in Adelaide by University of Adelaide Press Barr Smith Library The University of Adelaide South Australia 5005 [email protected] www.adelaide.edu.au/press on behalf of the Royal Society of South Australia Inc. © 2018 Royal Society of South Australia. This work is licenced under the Creative Commons Attribution-NonCommercial- NoDerivatives 4.0 International (CC BY-NC-ND 4.0) License. To view a copy of this licence, visit http://creativecommons.org/licenses/by-nc-nd/4.0 or send a letter to Creative Commons, 444 Castro Street, Suite 900, Mountain View, California, 94041, USA. This licence allows for the copying, distribution, display and performance of this work for non-commercial purposes providing the work is clearly attributed to the copyright holders. -
ASBS Newsletter I Gave an Overview of Outside Our Sector), and of the Importance and Taxonomy Australia and Its Role and Governance
Newsletter No. 177 December 2018 Price: $5.00 AUSTRALASIAN SYSTEMATIC BOTANY SOCIETY INCORPORATED Council President Vice President Darren Crayn Daniel Murphy Australian Tropical Herbarium (CNS) Royal Botanic Gardens Victoria James Cook University, Cairns Campus Birdwood Avenue PO Box 6811, Cairns Qld 4870 Melbourne, Vic. 3004 Australia Australia Tel: (+617)/(07) 4232 1859 Tel: (+613)/(03) 9252 2377 Email: [email protected] Email: [email protected] Secretary Treasurer Jennifer Tate Matt Renner Institute of Fundamental Sciences Royal Botanic Garden Sydney Massey University Mrs Macquaries Road Private Bag 11222, Palmerston North 4442 Sydney NSW 2000 New Zealand Australia Tel: (+646)/(6) 356- 099 ext. 84718 Tel: (+61)/(0) 415 343 508 Email: [email protected] Email: [email protected] Councillor Councillor Ryonen Butcher Heidi Meudt Western Australian Herbarium Museum of New Zealand Te Papa Tongarewa Locked Bag 104 PO Box 467, Cable St Bentley Delivery Centre WA 6983 Wellington 6140, New Zealand Australia Tel: (+644)/(4) 381 7127 Tel: (+618)/(08) 9219 9136 Email: [email protected] Email: [email protected] Other constitutional bodies Hansjörg Eichler Research Committee Affiliate Society David Glenny Papua New Guinea Botanical Society Sarah Mathews Heidi Meudt Joanne Birch Advisory Standing Committees Katharina Nargar Financial Murray Henwood Patrick Brownsey Chair: Dan Murphy, Vice President, ex officio David Cantrill Grant application closing dates Bob Hill Hansjörg Eichler Research Fund: th th Ad -
Phylogenetics and Molecular Evolution of Alismatales Based on Whole Plastid Genomes
PHYLOGENETICS AND MOLECULAR EVOLUTION OF ALISMATALES BASED ON WHOLE PLASTID GENOMES by Thomas Gregory Ross B.Sc. The University of British Columbia, 2011 A THESIS SUBMITTED IN PARTIAL FULFILLMENT OF THE REQUIRMENTS FOR THE DEGREE OF MASTER OF SCIENCE in The Faculty of Graduate and Postdoctoral Studies (Botany) THE UNIVERSITY OF BRITISH COLUMBIA (Vancouver) November 2014 © Thomas Gregory Ross, 2014 ABSTRACT The order Alismatales is a mostly aquatic group of monocots that displays substantial morphological and life history diversity, including the seagrasses, the only land plants that have re-colonized marine environments. Past phylogenetic studies of the order have either considered a single gene with dense taxonomic sampling, or several genes with thinner sampling. Despite substantial progress based on these studies, multiple phylogenetic uncertainties still remain concerning higher-order phylogenetic relationships. To address these issues, I completed a near- genus level sampling of the core alismatid families and the phylogenetically isolated family Tofieldiaceae, adding these new data to published sequences of Araceae and other monocots, eudicots and ANITA-grade angiosperms. I recovered whole plastid genomes (plastid gene sets representing up to 83 genes per taxa) and analyzed them using maximum likelihood and parsimony approaches. I recovered a well supported phylogenetic backbone for most of the order, with all families supported as monophyletic, and with strong support for most inter- and intrafamilial relationships. A major exception is the relative arrangement of Araceae, core alismatids and Tofieldiaceae; although most analyses recovered Tofieldiaceae as the sister-group of the rest of the order, this result was not well supported. Different partitioning schemes used in the likelihood analyses had little effect on patterns of clade support across the order, and the parsimony and likelihood results were generally highly congruent. -
Meristic and Organogenetic Variation in Ruppia Occidentalis and R
University of Nebraska - Lincoln DigitalCommons@University of Nebraska - Lincoln Faculty Publications in the Biological Sciences Papers in the Biological Sciences 1993 Meristic and Organogenetic Variation in Ruppia occidentalis and R. maritima Robert B. Kaul University of Nebraska-Lincoln Follow this and additional works at: https://digitalcommons.unl.edu/bioscifacpub Part of the Biology Commons, and the Botany Commons Kaul, Robert B., "Meristic and Organogenetic Variation in Ruppia occidentalis and R. maritima" (1993). Faculty Publications in the Biological Sciences. 854. https://digitalcommons.unl.edu/bioscifacpub/854 This Article is brought to you for free and open access by the Papers in the Biological Sciences at DigitalCommons@University of Nebraska - Lincoln. It has been accepted for inclusion in Faculty Publications in the Biological Sciences by an authorized administrator of DigitalCommons@University of Nebraska - Lincoln. Int. J. Plant Sci. 154(3):416-424. 1993. ? 1993 by The University of Chicago. All rights reserved. 1058-5893/93/5403-0007$02.00 MERISTIC AND ORGANOGENETIC VARIATION IN RUPPIA OCCIDENTALIS AND R. MARITIMA ROBERT B. KAUL1 School of Biological Sciences, University of Nebraska, Lincoln, Nebraska 68588-0118 Floral meristic and organogenetic variation was sampled in Ruppia occidentalis from an alkaline lake of the Nebraska Sandhills and in Ruppia maritima var. rostrata from a saline, non-Sandhills lake nearby. The androecium is meristically stable, always having two stamens, but the gynoecium is not. Seventy- two percent of the flowers of R. maritima had four carpels and the others had three, and in 80% of inflorescences the two flowers had the same number. In about one-third of inflorescences having dissimilar carpel numbers, the four-carpellate flower was uppermost. -
3.03 Seagrasses of Southeastern Australia
Chapter 3.3 — Seagrasses of southeastern Australia • 276 3.3 Seagrasses of southeastern Australia Robert J. Williams1, P. R. Scanes2 and James Udy3 1Senior Research Scientist (retired), NSW Department of Primary Industries (Fisheries), Australia 2Senior Team Leader Estuaries and Catchment Science, NSW Office of Environment and Heritage, Australia 3Chief Scientist, Queensland Healthy Waterways, Australia Abstract The southeast portion of Australia has a high energy coastline that generally prohibits growth of seagrasses except in sheltered bays and estuaries. This is also the most densely populated portion of the country, meaning that seagrasses are subject to pressures from agriculture, industry, and urban activities. Yet the maintenance of healthy seagrass meadows is critical to the economy of these regions as it forms a critical link in the food chain of many recreational and commercial fish species as well as providing other functions. In order to generate a better understanding of these pressures and derive appropriate economic and environmental outcomes, an understanding of the biology of seagrasses and their value to the community is critical. This chapter presents an overview of the seagrass habitats of SE Australia as well as the differing management approaches in Queensland, New South Wales and Victoria. It also provides an overview of the role of community monitoring projects in providing important information for management of these critical habitats. Chapter 3.3 — Seagrasses of southeastern Australia • 277 Introduction of the ever growing population pressure to use the locations in which seagrasses live – the shallow The body of knowledge about seagrasses in inshore waters of bays, lagoons and estuaries. Australia, and at the global scale is extensive (see texts in the supplementary reading list). -
Studies on the Biomass, Diversity and Nutrient Relationships of Macroalgae and Seagrasses in Lake Illawarra, New South Wales, Australia
University of Wollongong Theses Collection University of Wollongong Theses Collection University of Wollongong Year Studies on the biomass, diversity and nutrient relationships of macroalgae and seagrasses in Lake Illawarra, New South Wales, Australia Karin Rutten University of Wollongong Rutten, Karin, Studies on the biomass, diversity and nutrient relationships of macroalgae and seagrasses in Lake Illawarra, New South Wales, Australia, PhD thesis, School of Earth and Environmental Sciences, University of Wollongong, 2007. http://ro.uow.edu.au/theses/22 This paper is posted at Research Online. http://ro.uow.edu.au/theses/22 Studies on the biomass, diversity and nutrient relationships of macroalgae and seagrasses in Lake Illawarra, New South Wales, Australia A thesis submitted in fulfillment of the requirements for the award of the degree DOCTOR OF PHILOSOPHY from UNIVERSITY OF WOLLONGONG by KARIN RUTTEN SCHOOL OF EARTH AND ENVIRONMENTAL SCIENCES - 2007 - Thesis Declaration I, Karin Rutten, declare that this thesis, submitted in fulfillment of the requirements for the award of Doctor of Philosophy, in the School of Earth and Environmental Sciences, University of Wollongong, is wholly my own work unless otherwise referenced or acknowledged. The document has not been submitted for qualifications at any other institution. Karin Rutten - II - Table of Contents Thesis Declaration ........................................................................................................................ II Table of Contents........................................................................................................................ -
Biodiversity Summary: Kangaroo Island, South Australia
Biodiversity Summary for NRM Regions Species List What is the summary for and where does it come from? This list has been produced by the Department of Sustainability, Environment, Water, Population and Communities (SEWPC) for the Natural Resource Management Spatial Information System. The list was produced using the AustralianAustralian Natural Natural Heritage Heritage Assessment Assessment Tool Tool (ANHAT), which analyses data from a range of plant and animal surveys and collections from across Australia to automatically generate a report for each NRM region. Data sources (Appendix 2) include national and state herbaria, museums, state governments, CSIRO, Birds Australia and a range of surveys conducted by or for DEWHA. For each family of plant and animal covered by ANHAT (Appendix 1), this document gives the number of species in the country and how many of them are found in the region. It also identifies species listed as Vulnerable, Critically Endangered, Endangered or Conservation Dependent under the EPBC Act. A biodiversity summary for this region is also available. For more information please see: www.environment.gov.au/heritage/anhat/index.html Limitations • ANHAT currently contains information on the distribution of over 30,000 Australian taxa. This includes all mammals, birds, reptiles, frogs and fish, 137 families of vascular plants (over 15,000 species) and a range of invertebrate groups. Groups notnot yet yet covered covered in inANHAT ANHAT are notnot included included in in the the list. list. • The data used come from authoritative sources, but they are not perfect. All species names have been confirmed as valid species names, but it is not possible to confirm all species locations. -
Biodiversity Summary: Swan, Western Australia
Biodiversity Summary for NRM Regions Species List What is the summary for and where does it come from? This list has been produced by the Department of Sustainability, Environment, Water, Population and Communities (SEWPC) for the Natural Resource Management Spatial Information System. The list was produced using the AustralianAustralian Natural Natural Heritage Heritage Assessment Assessment Tool Tool (ANHAT), which analyses data from a range of plant and animal surveys and collections from across Australia to automatically generate a report for each NRM region. Data sources (Appendix 2) include national and state herbaria, museums, state governments, CSIRO, Birds Australia and a range of surveys conducted by or for DEWHA. For each family of plant and animal covered by ANHAT (Appendix 1), this document gives the number of species in the country and how many of them are found in the region. It also identifies species listed as Vulnerable, Critically Endangered, Endangered or Conservation Dependent under the EPBC Act. A biodiversity summary for this region is also available. For more information please see: www.environment.gov.au/heritage/anhat/index.html Limitations • ANHAT currently contains information on the distribution of over 30,000 Australian taxa. This includes all mammals, birds, reptiles, frogs and fish, 137 families of vascular plants (over 15,000 species) and a range of invertebrate groups. Groups notnot yet yet covered covered in inANHAT ANHAT are notnot included included in in the the list. list. • The data used come from authoritative sources, but they are not perfect. All species names have been confirmed as valid species names, but it is not possible to confirm all species locations. -
World Atlas of Seagrasses
r'.' .S.."'^ '^^ '//'• £i UNEP WCMC World Atlas of Seagrasses Edmund P. Green and Frederick T. Short 3 qR^ Seagrasses a group of about sixty species of underwater marine flowering plants, grow in the shallow marine and estuary environments of all the world's continents except Antarctica. The primary food of animals such as manatees, dugongs, and green sea turtles, and critical habitat for thousands of other ani- mal and plant species, seagrasses are also considered one of the most important shallow-marine ecosystems for humans, since they play an important role in fishery production. Though they are highly valuable ecologically and economically, many seagrass habitats around the world have been completely destroyed or are now in rapid decline. The World Atlas of Seagrasses is the first authoritative and comprehensive global synthesis of the distribution and status of this critical marine habitat. Illustrated throughout with color maps, photographs. tables, and more, and written by an international team of collaborators, this unique volume covers seagrass ecology, scientific studies to date, current status. changing distributions, threatened areas, and conserva- tion and management efforts for twenty-four regions of the world. As human populations expand and continue to live disproportionately in coastal areas, bringing new threats to seagrass habitat, a comprehensive overview Digitized by tine Internet Arciiive in 2010 with funding from UNEP-WCIVIC, Cambridge http://www.arcliive.org/details/worldatlasofseag03gree World Atlas of Seagrasses