(12) United States Patent (10) Patent No.: US 9,725,399 B2 Petrie Et Al

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(12) United States Patent (10) Patent No.: US 9,725,399 B2 Petrie Et Al USO09725399B2 (12) United States Patent (10) Patent No.: US 9,725,399 B2 Petrie et al. (45) Date of Patent: Aug. 8, 2017 (54) LPID COMPRISING LONG CHAN (51) Int. Cl. POLYUNSATURATED FATTY ACDS C07C 69/587 (2006.01) CIIB I/O (2006.01) (71) Applicants: Commonwealth Scientific and (Continued) Industrial Research Organisation, (52) U.S. Cl. Acton, Australian Capital Territory CPC .............. C07C 69/587 (2013.01); A23D 9/00 (AU): Nuseed Pty Ltd, Laverton North, (2013.01); A61K 36/31 (2013.01): CIIB I/10 Victoria (AU); Grains Research and (2013.01); A61 K 2.236/00 (2013.01) Development Corporation, Barton, (58) Field of Classification Search Australian Capital Territory (AU) CPC .......................... C12N 15/8247; CO7C 69/587 See application file for complete search history. (72) Inventors: James Robertson Petrie, Goulburn (AU); Surinder Pal Singh, Downer (56) References Cited (AU); Pushkar Shrestha, Lawson U.S. PATENT DOCUMENTS (AU); Jason Timothy McAllister, Portarlington (AU); Robert Charles De 4,399.216 A 8, 1983 Axel et al. Feyter, Monash (AU); Malcolm David 5,004,863. A 4, 1991 Umbeck Devine, Vernon (CA) (Continued) (73) Assignees: COMMONWEALTH SCIENTIFIC FOREIGN PATENT DOCUMENTS AND INDUSTRIAL RESEARCH AU 667939 1, 1994 ORGANISATION, Campbell (AU): AU 200059710 B2 12/2000 NUSEED PTY LTD, Laverton North (Continued) (AU); GRAINS RESEARCH AND DEVELOPMENT CORPORATION, Barton (AU) OTHER PUBLICATIONS Ruiz-Lopez, N. et al., “Metabolic engineering of the omega-3 long (*) Notice: Subject to any disclaimer, the term of this chain polyunsaturated fatty acid biosynthetic pathway into trans patent is extended or adjusted under 35 genic plants' Journal of Experimental botany, 2012, vol. 63, pp. U.S.C. 154(b) by 0 days. 2397-2410. (Continued) (21) Appl. No.: 14/575,756 Primary Examiner – Yate K Cutliff (22) Filed: Dec. 18, 2014 (74) Attorney, Agent, or Firm — John P. White; Gary J. Gershik; Cooper & Dunham LLP (65) Prior Publication Data (57) ABSTRACT US 2015/O166928 A1 Jun. 18, 2015 The present invention relates to extracted plant lipid or microbial lipid comprising docosahexaenoic acid, and/or (30) Foreign Application Priority Data docosapentaenoic acid, and processes for producing the extracted lipid. Dec. 18, 2013 (AU) ................................ 2O139.05033 Jun. 27, 2014 (AU) ................................ 2O14902471 33 Claims, 10 Drawing Sheets . Y 8:3AS.215 (ALA) -- 8,,2, 3 (SA; 2:3:4,7 \ 2:SAS8, 4. EPAs - J & &i. : & :: 3. 3.9 (3A) -- 4:59,3,5,8,2; 22:6.4,, , 3.3f. A s----- 24:33.8125.8.2. 3-oxiciatic US 9,725,399 B2 Page 2 (51) Int. Cl. 7,081,356 B2 7/2006 Putten et al. A6 IK 36/3 (2006.01) 7,091,005 B2 8, 2006 Petrukhin et al. 7,109,392 B1 9/2006 Broglie et al. A23D 9/00 (2006.01) 7,135,614 B1 1 1/2006 DeBonte et al. 7,135,623 B1 11/2006 Rusing et al. 7,148,336 B2 12/2006 Fillatti (56) References Cited 7,179,647 B2 2/2007 Lerchl et al. 7,189,559 B2 3/2007 Damude et al. U.S. PATENT DOCUMENTS 7,192,762 B2 3/2007 Macool et al. 7,198.937 B2 4/2007 Xue et al. 33: A 38; Nike a 7,208,297 B2 4/2007 Mukerji et al. k --- 7,211,418 B2 5/2007 Metz et al. 5,177,010 A 1/1993 Goldman et al. 7.211,656 B2 5/2007 Mukerji et al. A 'g R 1 7,214,853 B2 5/2007 Facciotti et al. 5.4553 A 9, 1995 tral 7,217,856 B2 5 2007 Weaver et al. 5,463,174. A 10/1995f Moloney11 et all et al. 7,241,6197,220,897 B2 7/20075 2007 Mukerji et al. 3. A $39. East etal 7,244,563 B2 7/2007 Cahoon et al. 5,545,818. A 8/1996 McBride et al. 7,247.461 B2 7/2007 Metz et al. 5,552.306 A 9, 1996 Th 1 7.256,033 B2 8/2007 Damude et al. 5569.834. A 10/1996 E. cal 7,262,343 B1 8, 2007 DeBonte et al. - W - Inchee et al. 7,271,315 B2 9/2007 Metz et al. 5,589,617 A leg N. et l 7,273,746 B2 9/2007 Yadav et al. is: A :1922 sA. tal 7,402,735 B2 7/2008 Browse et al. 5663,068 A 9/1997 Thomas et al. 79. R: $39. Myers al 5,668,299 A 9/1997 Debonte et al. 763, 5 36 CE." 5,683,898 A 11/1997 Yazawa et al. 7.550.286 B2 6/2009 Damude et al 5,689,050 A 11/1997f Thomash et al.1 7.550,651- - W B2 6/2009 Damude et al. 5,789,220 A 3. Thomas et 7,589.253 B2 9/2009 Green et al. 3.65 A SE S. .." 7,615,679 B2 11/2009 Lerchl et al. 5855347 A 1, 1999 list al. 7,619, 105 B2 11/2009 Green et al. w--/ 7,659,120 B2 2/2010 Yadav et al. 5,869,617 A SE VE et 7,659,247 B2 2/2010 Kretschmar et al. 3.3% A RE E. al 7,709,239 B2 5 2010 Damude et al. 5952,544 A 9, 1999 E. 7.714,185 B2 5/2010 Napier et al. 5968.809 A 10, 1999 Knutzon et al 7,736,884 B2 6/2010 Gunnarsson et al. 5972664 A 10/1999 Knutzon et al. 7,807,8497,777,098 B2 10/20108/2010 CirpusSingh et et al. al. SR A 58 A. 1 7,834,248 B2 11/2010 Green et al. 6100447 A 8/2000 St. et al. 7,834,250 B2 11/2010 Singh et al. 6.136,574. A 10/2000 RNAc al 7,838,651 B2 11/2010 Picataggio et al. 6.140.486 A 10/2000 Facciottietal. 23S R: 1588 El 6,194,167 B1 2/2001 Browse et al. 7,871.804 B2 1, 2011 C il 6,329,518 B1 12/2001 Green et al. 7879.50 B3 220 SNR, al 6,342,658 B1 1/2002 DeBonte et al. w - 6,355.861 B1 3f2002 Thomas 7,901928 B2 3/2011 Yadav et al. 6,372,965 B1 4/2002 Lightner et al. 3. R. 358: SE 6,403,349 B1 6/2002 Mukerji et al. 8084,074 B2 12/2011 Ki il 6,410,288 B1 6/2002 Knutzon et al. 8.106,326 B2 1/2012 Syl. 6.428,990 B1 8/2002 Mukerji et al. 858.392 B1 4/2012 SE et al. 6.459,0186.432,684 B1 10,8/2002 2002 MukerjiKnutzon et al. 8,288,572k - w B2 10/2012 Singh et al. 6.492.108 B1 12/2002 Hillman et al. 3:42 E: 838. SE et al 6,541,257 B2 4/2003 Lemaux et al. E. : : Sight al. 6,566,583 B1 5/2003 Facciotti et al. 8,778,644 B2 7/2014 Singhetal 6,589,767 B1 7/2003 Knutzon et al. 8.809.559 B2 8, 2014 Petrie et al. 6,620,986 B1 9/2003 McKeon et al. sw 6,635,451 B2 10/2003 Mukerji et al 8,816,106 B2 8/2014 Damcevski et al. 6677145 B2 1/2004 Mukerji et al. 8,816,111 B2 8, 2014 Petrie et al. 6,683.232 B1 1/2004 Th 8,853,432 B2 10/2014 Singh et al. 6,686.185 B. 32004 | Net al 8,921,652 B2 12/2014 Liu et al. 6.825,017 B1 1/2004 Browse et al. 8,946,460 B2 2/2015 Petrie et al. f in et al 2001 OO23259 A1 9, 2001 Slabas et al. 6,825,335 B1 11 2. Marinet d 2002/0009779 A1 1/2002 Meyers et al. 6,838,594 B1 1/2005 Kinney et al. 2002/0042933 A1 4/2002 Browse et al. 6,858.416 B2 2/2005 Mukerji et al. 2002/0065406 A1 5/2002 Meyers 6,875,5956,864,077 B1B2 4?3/2005 2005 CahoonKloek et et all al. 2002/0076.786 A1 6, 2002 Curtis et al. 6.88492 B2 4/2005 S. et il 2002/0107373 A1 8, 2002 Curtis et al. 6897.050 B1 5/2005 E. et al. 2002/0108147 A1 8, 2002 Thomas 6,913,916 Bf 7/2005 NEli et al 2002/011 1307 A1 8/2002 GluckSmann et al. 6,936,728- K - B2 8, 2005 SomervilleJet al.et al. 2002/0115178 A1 8/2002 Meyers et al. 6.958.229 B2 10, 2005 Suzuki et al. 2002/0138874 A1 9/2002 Mukerji et al. 6,967.243 B2 11/2005 Debonte et al. 2002/0146784 A1 10, 2002 Suzuki et al. 7,001,772 B2 2/2006 Roessler et al. 2002/0156254 A1 10/2002 Qiu et al. 7,045,683 B2 5/2006 Mukerji et al. 2002/0170090 A1 11/2002 Browse et al. 7,067.285 B2 6/2006 Mukerji et al. 2002/0194641 A1 12/2002 Metz et al. 7,067,722 B2 6/2006 Fillatti 2003/0033633 A1 2/2003 Lightner et al. 7,070,970 B2 7/2006 Mukerji et al. 2003, OO77747 A1 4, 2003 Hillman et al. US 9,725,399 B2 Page 3 (56) References Cited 2006/0218668 A1 9/2006 Cirpus et al. 2006/0246556 Al 11/2006 Napier et al. U.S. PATENT DOCUMENTS 2007/0028326 A1 2/2007 Cirpus et al. 2007/0059.730 A1 3, 2007 Curtis et al.
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