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analysis how-to

How to make a slide from a tissue specimen

-process -stains

How to tell what you’re looking at

-looking at an unfamiliar slide

3-D reconstruction from 2-D sections

Differentiating between basic tissue types

-stuff that looks like other stuff

HOW IS A SLIDE MADE?

1) obtain tissue block (biopsy, cadaver)

2) fix – chemical treatment – usually aldehydes -harden soft tissue, coagulate protein – crosslinks form -stop enzymes working -stop small molecules diffusing away, anchor carbohydrates -stop bacterial decomposition

3) embed – stiffen tissue block for cutting sections -dehydrate tissue, replace water with solvents -solvents replaced with waxes, plastics → solidify

4) cut embedded (or frozen) block →sections – 5 – 50 um thick for light (50 – 150 nm thick for electron microscope)

5) stain sections - increase contrast - tissue structures visible

5) mount sections on glass slides

Stains

Why stain? -fresh sections colorless, no contrast

Visualize specific tissue components with selective stains -can’t show all components in any one tissue section

Components of tissues visible by :

-acidic components – use basic dyes: hematoxylin, toluidine blue, -basic components – use acidic dyes: eosin -carbohydrates – use periodic acid-Schiff (PAS), stains mucus, basement membranes -proteins - use H & E, picrosirius, trichrome stains – collagen fibres -lipids - use lipid-soluble stains: osmium, Sudan black,

Combine stains  visualize multiple tissue elements at once -hematoxylin and eosin (H & E): both acidic and basic components -trichromes – three stains together

Hematoxylin and eosin – most common stain

Hematoxylin – basic dye  stains acidic tissue components blue/purple/black

acidic components attract basic dyes = basophilic

shows: nucleic acids: nuclei, nucleoli, ribosomes acidic parts of glycoproteins, glycosaminoglycans hyaline cartilage matrix, loose connective tissue matrix

Eosin – acidic dye  stains basic tissue components red/pink

basic components attract acidic dyes = acidophilic

shows: collagen, mitochondria, secretory granules cytoplasm

H & E STAINING OF ILEUM H8 H8 H & E STAINING OF ILEUM H8 H8 H & E STAINED COLON H9 H & E DUODENUM

H63 H & E STAINED COLLAGEN IN DUODENUM SUBMUCOSA

H63 H & E STAINED DUODENUM MUSCULARIS EXTERNA

H63 H & E STAINED AXILLA H68 H & E AXILLA GLAND SECRETORY REGION H68 H & E STAINED COLLAGEN IN AXILLA RETICULAR DERMIS

H68 H & E STAINED PAROTID GLAND H66

serous-secreting acini mucus-secreting acini Periodic acid - Schiff stain - many carbohydrates

2 steps: -periodic acid oxidises adjacent -OH groups on hexoses → aldehydes form

-Schiff's reagent (fuschine) stains aldehydes

Sugars stain pink-purple:

basement membrane glycoproteins

mucopolysaccharides (goblet cells)

PAS STAIN OF BASEMENT MEMBRANES slide 136 STAINING PROTEINS IN EXTRACELLULAR MATRIX

TYPE I COLLAGEN FIBRES H & E (pinkish, variable) picrosirius (and polarized light) trichrome stains Mallory's, Masson's

RETICULAR FIBRES (TYPE III COLLAGEN) silver stains

ELASTIN Verhoff's elastin stain orcein aldehyde fuscin H & E STAINED COLLAGEN IN AXILLA RETICULAR DERMIS

H68 TRICHROME STAINS

- 3 (or more) dyes: differentiate tissue elements visually

- aniline blue stains collagen blue

- acidic dyes: cytoplasm, muscle - pink-red-purple erythrocytes - orange -yellow nuclei - brown-black KIDNEY - MALLORY'S TRICHROME - collagen blue H201 OVIDUCT - trichrome H51 OVIDUCT - trichrome H51 URETER - trichrome H13 URETER - trichrome H13 URETER - trichrome H13 SPLEEN - silver stain: reticular fibres H60 AORTA - Verhoff's elastin stain H88 AORTA TUNICA MEDIA - Verhoff's elastin stain H88 EPIGLOTTIS

H & E H28

Verhoff's elastin stain H29 EPIGLOTTIS - Verhoff's stain, elastin fibres in cartilage H29 LIPID STAINS

-lipid-soluble oil red O Sudan black osmium MYELIN STAINED WITH OSMIUM - spread segment of peripheral nerve H24 Tissue analysis how-to

How to make a slide from a tissue specimen

-process -stains

How to tell what you’re looking at

-looking at an unfamiliar slide

3-D reconstruction from 2-D sections

Differentiating between basic tissue types

-stuff that looks like other stuff

Looking at a new slide

Examine by eye first, then at lower  higher magnification

-Don’t try to guess what it is yet!

Ask: -how cellular is the tissue (nuclei: how many, how big)? -how are the cells organized? How large? Where are their nuclei? -how much extracellular matrix is there? -are there fibres in the matrix? what color? how dense? how organized? -are there holes in the tissue? How many? How big? Are any connected?

Then ask what you can recognize: (does anything look familiar?) -overall appearance of the tissue? -basic tissue types? -cell types? -fibre types? -staining patterns in extracellular matrix?

Use what you know to work out what you don’t know

What do the instructions say to look for?

Look it up in the text (ask the instructors!)

19-13 Cormack 1-4 Cormack 1-8 Cormack 1-9 Basic 1-30 Basic Histology 18-15 The “orange” problem

Ross & Pawlina 1-11 The “orange” problem

Cormack 1-10 Look-alike tissues

Telford Plate 1 Look-alike tissues

stratified squamous epithelium, thin skin

transitional epithelium, bladder

Telford Plate 1 Look-alike tissues

Telford Plate 4 Look-alike tissues

cardiac muscle

skeletal muscle

Telford Plate 4 Look-alike tissues

Telford Plate 6 Look-alike tissues

whole nerve, longitudinal section

dense irregular connective tissue, dermis of skin

Telford Plate 6