Master Clone List for NR-19276

Rickettsia prowazekii, Strain Madrid E, Gateway® Clone Set, Recombinant in Escherichia coli, Plates 1-9

Catalog No. NR-19276

Table 1: Rickettsia prowazekii, Strain Madrid E, Gateway® Clone, Plate 1 (ZRPAA), NR-194491 Clone Well Locus ID Description ORF Length Accession Average Position Number Depth of Coverage 44236 A01 RP052 hypothetical RP052 310 NP_220446.1 2.609677 44528 A02 RP627 co-chaperonin GroES 322 NP_220992.1 2 44319 A03 RP323 frataxin-like protein 349 NP_220706.1 2.948424 44455 A04 RP199 adrenodoxin 373 NP_220587.1 2.160858 44552 A05 RP585 preprotein subunit YajC 463 NP_220954.1 2.930886 44403 A06 RP589 inorganic pyrophosphatase 553 NP_220958.1 2.625678 44491 A07 RP875 hypothetical protein RP875 559 NP_221222.1 2.613596 44327 A08 RP804 F0F1 ATP synthase subunit delta 586 NP_221154.1 2.414676 44515 A09 RP531 translation initiation factor IF-3 592 NP_220904.1 4.165541 44476 A10 RP731 dephospho-CoA kinase 610 NP_221084.1 3.44918 44299 A11 RP876 lipoate-protein B 664 NP_221223.1 2.929217 44375 A12 RP746 III (nth) 673 NP_221098.1 3.748886 44440 B01 RP438 recombination protein RecR 715 NP_220819.1 2.685315 44361 B02 RP147 hypothetical protein RP147 745 NP_220538.1 3.688591 transcriptional activator protein CZCR 44387 B03 RP071 748 NP_220465.1 2.358289 (czcR) 44195 B04 RP137 50S ribosomal protein L1 751 NP_220528.1 3.030626 3-deoxy-manno-octulosonate 44244 B05 RP379 775 NP_220762.1 4.183226 cytidylyltransferase 44251 B06 RP369 ABC transporter ATP-binding protein 778 NP_220752.1 2.546272 44344 B07 RP555 hemolysin (tlyA) 790 NP_220927.1 4.158228 44467 B08 RP058 SOJ protein (soj) 802 NP_220452.1 3.275561 44216 B09 RP431 hypothetical protein RP431 835 NP_220812.1 3.45988 44227 B10 RP689 hypothetical protein RP689 835 NP_221050.1 3.759281 44452 B11 RP464 hypothetical protein RP464 892 NP_220844.1 3.689462 44394 B12 RP802 F0F1 ATP synthase subunit gamma 901 NP_221152.1 4.048835 lipid A biosynthesis lauroyl 44334 C01 RP718 907 NP_221073.1 3.871003 acyltransferase 44544 C02 RP688 hypothetical protein RP688 928 NP_221049.1 3.883621 44412 C03 RP775 cell division protein FTSY (ftsY) 946 NP_221126.1 3.752643 44427 C04 RP398 protease SohB 961 NP_220779.1 2.947971 44431 C05 RP087 elongation factor Ts 964 NP_220480.1 1.981328 44463 C06 RP189 DNA polymerase III subunit delta 1000 NP_220578.1 2.699 44348 C07 RP843 GTPase ObgE 1030 NP_221191.1 3.720388 44282 C08 RP341 hypothetical protein RP341 1060 NP_220724.1 4.913208 44256 C09 RP768 rod shape-determining protein MreB 1075 NP_221120.1 4.899535 44341 C10 RP884 ferrochelatase 1075 NP_221230.1 4.802791 44532 C11 RP120 hypothetical protein RP120 1099 NP_220512.1 4.684258 44226 C12 RP354 NADH dehydrogenase subunit D 1204 NP_220738.1 4.580565 44242 D01 RP251 cell division protein FTSA (ftsA) 1270 NP_220636.1 4.645669 ATP-dependent protease ATP- 44547 D02 RP692 1312 NP_221053.1 3.67378 binding subunit ClpX 44272 D03 RP042 cell cycle protein MESJ (mesJ) 1327 NP_220436.1 4.523738

BEI Resources E-mail: [email protected] www.beiresources.org Tel: 800-359-7370 Fax: 703-365-2898

© 2014 American Type Culture Collection (ATCC). All rights reserved. NR-19276_16JUN2014 Page 1 of 20

Master Clone List for NR-19276

Clone Well Locus ID Description ORF Length Accession Average Position Number Depth of Coverage UDP-N-acetylmuramoyl-L-alanyl-D- 44396 D04 RP410 1372 NP_220791.1 3.951166 glutamate synthetase 44448 D05 RP677 GTP-binding protein EngA 1378 NP_221038.1 4.434688 ATP-dependent protease ATP- 44324 D06 RP320 1387 NP_220703.1 4.55876 binding subunit HslU 44212 D07 RP460 dihydrolipoamide dehydrogenase 1396 NP_220840.1 3.530086 outer membrane protein TOLC 44231 D08 RP224 1405 NP_220610.1 1.233452 precursor (tolC) 44480 D09 RP583 magnesium transporter (mgtE) 1405 NP_220953.1 4.467616 44382 D10 RP085 cysteinyl-tRNA synthetase 1408 NP_220478.1 4.193182 44417 D11 RP537 NADH dehydrogenase subunit N 1411 NP_220910.1 3.696669 chromosomal replication initiation 44201 D12 RP601 1426 NP_220969.1 4.431978 protein 44374 E01 RP801 F0F1 ATP synthase subunit beta 1459 NP_221151.1 4.197395 nitrogen assimilation regulatory 44541 E02 RP562 1462 NP_220934.1 4.157319 protein NTRX (ntrX) 44487 E03 RP377 ADP,ATP carrier protein 1558 NP_220760.1 3.075096 periplasmic serine protease DO-like 44535 E04 RP124 1576 NP_220516.1 3.149746 precursor 44193 E05 RP538 hypothetical protein RP538 1576 NP_220911.1 3.177665 44426 E06 RP083 hypothetical protein RP083 1600 NP_220476.1 5.083125 44265 E07 RP822 hypothetical protein RP822 1621 NP_221171.1 4.727946 44356 E08 RP626 chaperonin GroEL 1687 NP_220991.1 4.72377 putative ABC transporter ATP-binding 44436 E09 RP060 1702 NP_220454.1 4.334313 protein 44421 E10 RP521 30S ribosomal protein S1 1741 NP_220895.1 4.620908 44311 E11 RP696 transport ATP-binding protein MsbA 1765 NP_221056.1 1.988669 poly-BETA-hydroxybutyrate 44309 E12 RP820 1789 NP_221169.1 4.240917 polymerase (phbC2) 44352 F01 RP200 chaperone protein HscA 1816 NP_220588.1 4.57489 44317 F02 RP880 DNA mismatch repair protein 1822 NP_221226.1 4.372667 44268 F03 RP534 hypothetical protein RP534 1831 NP_220907.1 4.004915 44384 F04 RP275 GTP-binding protein LepA 1837 NP_220660.1 3.881873 nitrogen regulation protein NTRY 44294 F05 RP614 1840 NP_220981.1 3.883696 (ntrY) 44504 F06 RP263 hypothetical protein RP263 1852 NP_220648.1 3.896868 44336 F07 RP146 hypothetical protein RP146 1873 NP_220537.1 4.403097 tRNA uridine 5- 44512 F08 RP056 carboxymethylaminomethyl 1900 NP_220450.1 4.357895 modification GidA 44486 F09 RP840 heat shock protein 90 1900 NP_221188.1 4.475789 44400 F10 RP221 threonyl-tRNA synthetase 1942 NP_220607.1 3.856334 44289 F11 RP447 DNA helicase II 2011 NP_220828.1 3.857285 44209 F12 RP132 elongation factor G 2134 NP_220524.1 3.478913 44560 G01 RP174 peptidase 2203 NP_220564.1 3.149796 44461 G02 RP067 DNA topoisomerase IV subunit A 2251 NP_220461.1 3.848512 44557 G03 RP373 malic enzyme 2338 NP_220756.1 4.664243 44188 G04 RP807 penicillin-binding protein 1A (mrcA) 2398 NP_221157.1 3.817765 44565 G05 RP784 VIRB4 protein precursor (virB4) 2467 NP_221134.1 3.530604 44286 G06 RP036 CLPB protein (clpB) 2611 NP_220430.1 4.345845 44276 G07 RP856 alanyl-tRNA synthetase 2668 NP_221204.1 3.544978 44206 G08 RP492 pyruvate phosphate dikinase 2677 NP_220868.1 4.700784 44298 G09 RP575 preprotein translocase subunit SecA 2755 NP_220946.1 4.347368

BEI Resources E-mail: [email protected] www.beiresources.org Tel: 800-359-7370 Fax: 703-365-2898

© 2014 American Type Culture Collection (ATCC). All rights reserved. NR-19276_16JUN2014 Page 2 of 20

Master Clone List for NR-19276

Clone Well Locus ID Description ORF Length Accession Average Position Number Depth of Coverage 44306 G10 RP835 excinuclease ABC subunit A 2896 NP_221184.1 4.406768 44499 G11 RP617 isoleucyl-tRNA synthetase 3295 NP_220984.1 2.784219 DNA-directed RNA polymerase 44407 G12 RP140 4159 NP_220531.1 4.951671 subunit beta

Table 2: Rickettsia prowazekii, Strain Madrid E, Gateway® Clone, Plate 2 (ZRPAB), NR-194501 Clone Well Locus ID Description ORF Length Accession Average Position Number Depth of Coverage 44610 A01 RP164 hypothetical protein RP164 160 NP_220554.1 2 44811 A02 RP456 50S ribosomal protein L36 160 NP_220836.1 2 44949 A03 RP352 hypothetical protein RP352 166 NP_220736.1 1.668674699 44580 A04 RP610 50S ribosomal protein L34 169 NP_220978.1 2 44779 A05 RP080 hypothetical protein RP080 187 NP_220473.1 1.721925134 44731 A06 RP749 twin arginine translocase protein A 199 NP_221101.1 - 44643 A07 RP279 hypothetical protein RP279 202 NP_220663.1 - 44696 A08 RP331 hypothetical protein RP331 202 NP_220714.1 2.415841584 44896 A09 RP879 50S ribosomal protein L33 205 NP_221225.1 2 44592 A10 RP088 hypothetical protein RP088 214 NP_220481.1 2.317757009 44747 A11 RP288 hypothetical protein RP288 214 NP_220672.1 2 tellurium resistance protein TERC 44655 A12 RP787 217 NP_221137.1 2.658986175 (terC) 44799 B01 RP641 50S ribosomal protein L30 226 NP_221005.1 2 44707 B02 RP488 hypothetical protein RP488 229 NP_220865.1 1.851528384 44784 B03 RP773 50S ribosomal protein L32 232 NP_221124.1 1.689655172 44763 B04 RP134 preprotein translocase subunit SecE 235 NP_220525.1 1.668085106 44752 B05 RP615 30S ribosomal protein S21 235 NP_220982.1 2.289361702 44903 B06 RP158 hypothetical protein RP158 238 NP_220549.1 2.970588235 44936 B07 RP207 hypothetical protein RP207 238 NP_220595.1 1.648305085 44712 B08 RP608 50S ribosomal protein L35 238 NP_220976.1 3.302521008 44786 B09 RP244 hypothetical protein RP244 241 NP_220629.1 1.975103734 44700 B10 RP543 hypothetical protein RP543 247 NP_220916.1 2.295546559 44772 B11 RP670 cold shock-like protein (cspA) 247 NP_221032.1 2.271255061 44603 B12 RP651 50S ribosomal protein L29 250 NP_221015.1 2 44851 C01 RP814 translation initiation factor IF-1 250 NP_221163.1 1.976 44766 C02 RP022 F0F1 ATP synthase subunit C 259 NP_220416.1 2 44900 C03 RP757 hypothetical protein RP757 259 NP_221109.1 2.243243243 44842 C04 RP650 30S ribosomal protein S17 268 NP_221014.1 1.634328358 44676 C05 RP812 hypothetical protein RP812 268 NP_221162.1 3.294776119 44846 C06 RP100 50S ribosomal protein L31 271 NP_220493.1 2 44662 C07 RP113 hypothetical protein RP113 271 NP_220505.1 3.638376384 44825 C08 RP167 hypothetical protein RP167 271 NP_220557.1 3.258302583 morphology/transcription regulator 44861 C09 RP245 277 NP_220630.1 2.63898917 BolA family protein VII small 44586 C10 RP350 277 NP_220733.1 2.967509025 subunit 44621 C11 RP524 hypothetical protein RP524 277 NP_220897.1 3.281588448 44638 C12 RP024 hypothetical protein RP024 283 NP_220418.1 - 44758 D01 RP409 hypothetical protein RP409 283 NP_220790.1 1.869257951 44682 D02 RP697 hypothetical protein RP697 283 NP_221057.1 2.25795053 44792 D03 RP098 hypothetical protein RP098 286 NP_220491.1 2.300699301

BEI Resources E-mail: [email protected] www.beiresources.org Tel: 800-359-7370 Fax: 703-365-2898

© 2014 American Type Culture Collection (ATCC). All rights reserved. NR-19276_16JUN2014 Page 3 of 20

Master Clone List for NR-19276

Clone Well Locus ID Description ORF Length Accession Average Position Number Depth of Coverage 44650 D04 RP362 hypothetical protein RP362 286 NP_220745.1 2.265734266 44729 D05 RP061 hypothetical protein RP061 289 NP_220455.1 3.266435986 44922 D06 RP752 50S ribosomal protein L27 295 NP_221104.1 1.644067797 44625 D07 RP763 acyl carrier protein 295 CAA15191.1 2.633898305 44692 D08 RP599 hypothetical protein RP599 298 NP_220967.1 2.275167785 44830 D09 RP169 hypothetical protein RP169 307 NP_220559.1 1.882736156 44718 D10 RP215 hypothetical protein RP215 307 NP_220601.1 1.651465798 44878 D11 RP550 hypothetical protein RP550 307 NP_220922.1 2 44887 D12 RP633 30S ribosomal protein S20 307 NP_220997.1 2 44754 E01 RP503 30S ribosomal protein S15 310 NP_220879.1 2 44606 E02 RP766 hypothetical protein RP766 313 NP_221118.1 2 44601 E03 RP723 hypothetical protein RP723 319 NP_221078.1 2.611285266 44574 E04 RP040 30S ribosomal protein S18 322 NP_220434.1 1.99689441 44806 E05 RP204 glutaredoxin 3 (grxC1) 322 NP_220592.1 1.639751553 integration host factor alpha-subunit 44736 E06 RP708 322 NP_221067.1 3.152173913 (himA) 44928 E07 RP679 hypothetical protein RP679 325 NP_221040.1 3.230769231 44872 E08 RP099 50S ribosomal protein L28 328 NP_220492.1 2.240853659 44883 E09 RP657 50S ribosomal protein L23 331 NP_221021.1 3.966767372 44702 E10 RP709 hypothetical protein RP709 331 NP_221068.1 1.987915408 44932 E11 RP079 preprotein translocase subunit SecG 337 NP_220472.1 3.237388724 aspartyl/glutamyl-tRNA 44919 E12 RP153 337 NP_220544.1 2 amidotransferase subunit C 44892 F01 RP725 hypothetical protein RP725 337 NP_221080.1 3.222551929 44724 F02 RP646 30S ribosomal protein S14 340 NP_221010.1 2.211764706 putative monovalent cation/H+ 44854 F03 RP156 346 NP_220547.1 3.069364162 antiporter subunit E 44816 F04 RP660 30S ribosomal protein S10 352 NP_221024.1 4.199430199 44864 F05 RP751 50S ribosomal protein L21 352 NP_221103.1 3.213068182 44916 F06 RP756 hypothetical protein RP756 352 NP_221108.1 3.184659091 44876 F07 RP839 hypothetical protein RP839 352 NP_221187.1 2.599431818 putative monovalent cation/H+ 44942 F08 RP266 355 NP_220651.1 2.081690141 antiporter subunit G 44570 F09 RP547 hypothetical protein RP547 355 NP_220920.1 3.101408451 44802 F10 RP240 hypothetical protein RP240 358 NP_220625.1 2.938547486 44838 F11 RP423 hypothetical protein RP423 358 NP_220804.1 2 44826 F12 RP714 ankyrin, BRAIN variant 2 (ank2) 358 NP_221071.1 2.391061453 glutaredoxin-like protein GRLA 44950 G01 RP745 358 NP_221097.1 1.988826816 (grxC2) 44940 G02 RP866 hypothetical protein RP866 358 NP_221214.1 3.162011173 44818 G03 RP811 hypothetical protein RP811 361 NP_221161.1 2.603878116 44594 G04 RP826 hypothetical protein RP826 361 NP_221175.1 2.59833795 44776 G05 RP829 ferredoxin (fdxA) 364 NP_221178.1 3.225274725 44714 G06 RP063 HESB protein (hesB1) 367 NP_220457.1 1.596730245 44582 G07 RP171 DNA-binding protein HU (hupA) 367 NP_220561.1 2.179836512 44632 G08 RP484 HESB protein (hesB2) 367 NP_220861.1 2.217983651 44658 G09 RP532 hypothetical protein RP532 367 NP_220905.1 1.970027248 44670 G10 RP791 NADH dehydrogenase subunit K 367 CAA15217.1 - 44614 G11 RP878 30S ribosomal protein S16 370 NP_221224.1 1.9 44647 G12 RP800 F0F1 ATP synthase subunit epsilon 373 NP_221150.1 2.509383378 44738 H01 RP648 50S ribosomal protein L24 376 NP_221012.1 1.949468085 44666 H02 RP548 382 CAA14997.1 2

BEI Resources E-mail: [email protected] www.beiresources.org Tel: 800-359-7370 Fax: 703-365-2898

© 2014 American Type Culture Collection (ATCC). All rights reserved. NR-19276_16JUN2014 Page 4 of 20

Master Clone List for NR-19276

Clone Well Locus ID Description ORF Length Accession Average Position Number Depth of Coverage 44634 H03 RP318 hypothetical protein RP318 385 NP_220701.1 3.124675325 44906 H04 RP554 hypothetical protein RP554 388 NP_220926.1 2.103092784 44866 H05 RP609 50S ribosomal protein L20 388 NP_220977.1 1.824742268 44742 H06 RP222 hypothetical protein RP222 391 NP_220608.1 3.166240409 44834 H07 RP643 50S ribosomal protein L18 391 NP_221007.1 3 44628 H08 RP798 hypothetical protein RP798 391 NP_221148.1 3.191815857 44688 H09 RP654 30S ribosomal protein S19 394 NP_221018.1 3.200507614 44680 H10 RP317 protein kinase C inhibitor 1 (pkcI) 397 NP_220700.1 2.173803526 44910 H11 RP039 30S ribosomal protein S6 400 NP_220433.1 2

Table 3: Rickettsia prowazekii, Strain Madrid E, Gateway® Clone, Plate 3 (ZRPAC), NR-194511 Clone Well Locus ID Description ORF Length Accession Average Position Number Depth of Coverage 45075 A01 RP611 P 400 NP_220979.1 2 45122 A02 RP649 50S ribosomal protein L14 403 NP_221013.1 2 45171 A03 RP357 NADH dehydrogenase subunit A 406 NP_220741.1 2.566502 45279 A04 RP600 hypothetical protein RP600 406 NP_220968.1 2 succinate dehydrogenase 45006 A05 RP126 409 NP_220518.1 2 cytochrome B560 subunit (sdhC) succinate dehydrogenase 44979 A06 RP127 hydrophobic membrane anchor 412 NP_220519.1 2 protein (sdhD) 45282 A07 RP139 50S ribosomal protein L7/L12 412 NP_220530.1 2 45186 A08 RP394 hypothetical protein RP394 412 NP_220775.1 2 45014 A09 RP637 30S ribosomal protein S13 412 NP_221001.1 1.907767 45199 A10 RP502 hypothetical protein RP502 415 NP_220878.1 2 45255 A11 RP577 4'-phosphopantetheinyl 415 NP_220948.1 2 45162 A12 RP051 hypothetical protein RP051 418 NP_220445.1 2 DNA-directed RNA polymerase 45110 B01 RP578 418 NP_220949.1 2 subunit omega 45182 B02 RP636 30S ribosomal protein S11 418 NP_221000.1 2 45202 B03 RP192 hypothetical protein RP192 421 NP_220581.1 2 45106 B04 RP435 ribosome-binding factor A 421 NP_220816.1 2 cytochrome c-type biogenesis protein 45190 B05 RP588 421 NP_220957.1 2 CcmE 44990 B06 RP130 30S ribosomal protein S12 424 NP_220522.1 2 45210 B07 RP568 hypothetical protein RP568 424 NP_220940.1 2 45002 B08 RP002 thioredoxin (trxA) 427 NP_220398.1 1.990632 45207 B09 RP497 hypothetical protein RP497 427 NP_220873.1 2 44967 B10 RP485 scaffold protein 430 NP_220862.1 1.990698 45239 B11 RP645 30S ribosomal protein S8 433 NP_221009.1 2 NAD(P) transhydrogenase subunit 45307 B12 RP862 433 NP_221210.1 2 alpha (pntAB) 45039 C01 RP549 442 CAA14998.1 2.99095 45178 C02 RP634 50S ribosomal protein L17 445 NP_220998.1 2 45035 C03 RP652 50S ribosomal protein L16 445 NP_221016.1 2.597753 45022 C04 RP225 hypothetical protein RP225 448 NP_220611.1 2 45335 C05 RP112 50S ribosomal protein L19 451 NP_220504.1 2 45082 C06 RP178 hypothetical protein RP178 451 NP_220568.1 2 45026 C07 RP201 co-chaperone HscB 454 CAA14666.1 2

BEI Resources E-mail: [email protected] www.beiresources.org Tel: 800-359-7370 Fax: 703-365-2898

© 2014 American Type Culture Collection (ATCC). All rights reserved. NR-19276_16JUN2014 Page 5 of 20

Master Clone List for NR-19276

Clone Well Locus ID Description ORF Length Accession Average Position Number Depth of Coverage 45286 C08 RP055 nucleoside diphosphate kinase 457 NP_220449.1 2 44994 C09 RP436 hypothetical protein RP436 460 NP_220817.1 2 45230 C10 RP082 hypothetical protein RP082 466 NP_220475.1 1.88412 45258 C11 RP310 TOLR protein (tolR) 466 NP_220694.1 2 45310 C12 RP517 sigma(54) modulation protein 466 NP_220893.1 2 45114 D01 RP806 hypothetical protein RP806 466 NP_221156.1 2 45219 D02 RP816 DnaK suppressor protein 466 NP_221165.1 2 45330 D03 RP013 hypothetical protein RP013 469 NP_220408.1 2 44970 D04 RP144 hypothetical protein RP144 469 NP_220535.1 2 45242 D05 RP299 ribose-5-phosphate B 469 NP_220683.1 2 (3R)-hydroxymyristoyl-ACP 45078 D06 RP008 472 NP_220404.1 2 45246 D07 RP136 50S ribosomal protein L11 472 NP_220527.1 2 45234 D08 RP507 hypothetical protein RP507 472 NP_220883.1 2 45102 D09 RP883 hypothetical protein RP883 472 NP_221229.1 2 45322 D10 RP166 hypothetical protein RP166 475 NP_220556.1 2 putative monovalent cation/H+ 45214 D11 RP285 475 NP_220669.1 2 antiporter subunit C 45174 D12 RP196 hypothetical protein RP196 481 NP_220584.1 2 deoxyuridine 5'-triphosphate 45266 E01 RP399 481 NP_220780.1 2 nucleotidohydrolase 45010 E02 RP722 hypothetical protein RP722 481 NP_221077.1 2 45130 E03 RP831 hypothetical protein RP831 481 NP_221180.1 2 45326 E04 RP177 hypothetical protein RP177 484 NP_220567.1 1.989669 45070 E05 RP570 cell division protein MraZ 484 NP_220942.1 2 45054 E06 RP724 hypothetical protein RP724 484 NP_221079.1 2 44982 E07 RP470 hypothetical protein RP470 487 NP_220849.1 2 45275 E08 RP640 50S ribosomal protein L15 487 NP_221004.1 2 45046 E09 RP070 preprotein translocase subunit SecB 493 NP_220464.1 2 45062 E10 RP269 hypothetical protein RP269 493 NP_220654.1 2 45139 E11 RP430 SsrA-binding protein 493 NP_220811.1 3.985801 44962 E12 RP726 493 NP_221081.1 2 44986 F01 RP836 single-stranded DNA-binding protein 493 NP_221185.1 2 45088 F02 RP774 hypothetical protein RP774 496 NP_221125.1 3.16129 44998 F03 RP712 hypothetical protein RP712 499 NP_221069.1 2 45142 F04 RP233 50S ribosomal protein L13 502 NP_220619.1 2 45263 F05 RP359 hypothetical protein RP359 502 NP_220743.1 2 peptidoglycan-associated lipoprotein 45223 F06 RP771 502 NP_221122.1 2 precursor (pal) Holliday junction resolvase-like 45314 F07 RP330 505 NP_220713.1 2 protein 45030 F08 RP188 hypothetical protein RP188 508 NP_220577.1 2 45166 F09 RP290 VIRB9 protein precursor (virB9) 508 NP_220674.1 2 45058 F10 RP707 hypothetical protein RP707 508 NP_221066.1 1.972441 45270 F11 RP021 F0F1 ATP synthase subunit B' 511 NP_220415.1 2 45090 F12 RP727 hypothetical protein RP727 514 NP_221082.1 3.992233 45094 G01 RP795 NADH dehydrogenase subunit I 514 NP_221145.1 1.92607 44974 G02 RP818 hypothetical protein RP818 514 NP_221167.1 2 45146 G03 RP833 17 kDa common-antigen 514 NP_221182.1 2 45298 G04 RP131 30S ribosomal protein S7 517 NP_220523.1 2 45154 G05 RP149 hypothetical protein RP149 520 NP_220540.1 2

BEI Resources E-mail: [email protected] www.beiresources.org Tel: 800-359-7370 Fax: 703-365-2898

© 2014 American Type Culture Collection (ATCC). All rights reserved. NR-19276_16JUN2014 Page 6 of 20

Master Clone List for NR-19276

Clone Well Locus ID Description ORF Length Accession Average Position Number Depth of Coverage 45158 G06 RP234 30S ribosomal protein S9 520 NP_220620.1 1.992308 dinucleoside polyphosphate 45227 G07 RP236 520 NP_220621.1 2.361538 45018 G08 RP311 hypothetical protein RP311 520 NP_220695.1 2 45134 G09 RP861 transcription elongation factor GreA 523 NP_221209.1 1.992352 44960 G10 RP252 hypothetical protein RP252 526 NP_220637.1 2.562738 45043 G11 RP273 HEAT shock protein (hsp22) 526 NP_220658.1 2 45152 G12 RP458 hypothetical protein RP458 526 NP_220838.1 3.146388 45302 H01 RP754 hypothetical protein RP754 526 NP_221106.1 1.992395 45294 H02 RP713 hypothetical protein RP713 529 NP_221070.1 2 45292 H03 RP084 hypothetical protein RP084 532 NP_220477.1 3.180451 45195 H04 RP348 16S rRNA-processing protein RimM 532 NP_220731.1 2 45318 H05 RP872 DNA polymerase III subunit chi 532 CAA15296.1 2 45050 H06 RP020 F0F1 ATP synthase subunit B 538 NP_220414.1 2 45126 H07 RP420 hypothetical protein RP420 538 NP_220801.1 1.923792 44954 H08 RP809 hypothetical protein RP809 538 NP_221159.1 2 45250 H09 RP119 Holliday junction resolvase 544 CAA14588.1 2 45098 H10 RP138 50S ribosomal protein L10 544 NP_220529.1 3.933824 45119 H11 RP041 50S ribosomal protein L9 550 NP_220435.1 2 45666 H12 RP370 hypothetical protein RP370 553 NP_220753.1 2

Table 4: Rickettsia prowazekii, Strain Madrid E, Gateway® Clone, Plate 4 (ZRPAD), NR-194521 Clone Well Locus ID Description ORF Length Accession Average Position Number Depth of Coverage 45638 A01 RP461 hypothetical protein RP461 553 NP_220841.1 1.992767 45466 A02 RP501 tRNA pseudouridine synthase B 553 NP_220877.1 2.985507 45534 A03 RP437 hypothetical protein RP437 556 NP_220818.1 2 45503 A04 RP566 hypothetical protein RP566 556 NP_220938.1 1.992806 transcription antitermination protein 45395 A05 RP162 559 NP_220552.1 1.987478 NusB 45363 A06 RP356 NADH dehydrogenase subunit B 559 NP_220740.1 1.989267 45542 A07 RP208 peptide deformylase 562 NP_220596.1 2 45603 A08 RP253 cytochrome C (cycM) 562 NP_220638.1 2 45378 A09 RP642 30S ribosomal protein S5 562 NP_221006.1 1.998221 cytochrome B6-F complex IRON- 45447 A10 RP270 568 NP_220655.1 1.987676 sulfur subunit (petA) 45343 A11 RP353 NADH dehydrogenase subunit E 568 NP_220737.1 1.989437 45674 A12 RP644 50S ribosomal protein L6 568 NP_221008.1 1.991197 ubiquinone biosynthesis protein 45622 B01 RP190 571 NP_220579.1 1.992995 COQ7 (coq7) cytochrome C oxidase assembly 45414 B02 RP304 571 NP_220688.1 2 protein 45670 B03 RP629 heat shock protein GrpE 571 NP_220994.1 - 45358 B04 RP647 50S ribosomal protein L5 574 NP_221011.1 1.989547 45678 B05 RP392 intracellular septation protein A 577 NP_220773.1 1.989601 45338 B06 RP741 putative metalloprotease 577 NP_221093.1 2 45470 B07 RP788 hypothetical protein RP787 577 NP_221138.1 1.991334 CDP-diacylglycerol--glycerol-3- 45478 B08 RP049 phosphate 3- 580 NP_220443.1 2 phosphatidyltransferase (pgsA)

BEI Resources E-mail: [email protected] www.beiresources.org Tel: 800-359-7370 Fax: 703-365-2898

© 2014 American Type Culture Collection (ATCC). All rights reserved. NR-19276_16JUN2014 Page 7 of 20

Master Clone List for NR-19276

Clone Well Locus ID Description ORF Length Accession Average Position Number Depth of Coverage 45514 B09 RP573 hypothetical protein RP573 580 NP_220945.1 2 ATP-dependent protease peptidase 45462 B10 RP319 583 NP_220702.1 1.993139 subunit ribosomal-protein-alanine 45555 B11 RP693 586 NP_221054.1 2 acetyltransferase (rimJ) 45510 B12 RP264 hypothetical protein RP264 589 NP_220649.1 - 45531 C01 RP516 hypothetical protein RP516 592 NP_220892.1 1.988176 45687 C02 RP605 peptidyl-tRNA hydrolase 592 NP_220973.1 1.989865 45350 C03 RP073 hypothetical protein RP073 595 NP_220467.1 2 45631 C04 RP154 ribosome recycling factor 595 NP_220545.1 2 deoxycytidine triphosphate 45418 C05 RP069 601 NP_220463.1 1.991681 deaminase 45458 C06 RP238 elongation factor P 601 NP_220623.1 4.259136 45642 C07 RP032 hypothetical protein RP032 604 NP_220426.1 1.991722 45355 C08 RP541 aromatic acid decarboxylase 604 NP_220914.1 1.860927 45482 C09 RP383 GTP cyclohydrolase I 607 NP_220764.1 1.99341 45486 C10 RP667 hypothetical protein RP667 607 NP_221029.1 2 45574 C11 RP031 SCO2 protein precursor (sco2) 610 NP_220425.1 2 45434 C12 RP057 16S rRNA methyltransferase GidB 610 NP_220451.1 2 transcription antitermination protein 45390 D01 RP135 613 NP_220526.1 2 NusG 45582 D02 RP050 hypothetical protein RP050 616 NP_220444.1 2 45550 D03 RP202 ribonuclease HII 616 NP_220590.1 2 45490 D04 RP187 hypothetical protein RP187 619 NP_220576.1 2 45586 D05 RP324 hypothetical protein RP324 619 NP_220707.1 2 45523 D06 RP408 lipoprotein signal peptidase 619 NP_220789.1 1.990307 45540 D07 RP355 NADH dehydrogenase subunit C 628 NP_220739.1 3.504777 45571 D08 RP765 guanylate kinase 628 NP_221117.1 1.990446 cytochrome c biogenesis protein 45566 D09 RP794 628 NP_221144.1 1.993631 CcmA 45411 D10 RP094 hypothetical protein RP094 634 NP_220487.1 1.992114 45659 D11 RP385 Holliday junction DNA helicase RuvA 634 NP_220766.1 - 45442 D12 RP327 thioredoxin peroxidase 1 (tdpX1) 637 NP_220710.1 2 45374 E01 RP026 hypothetical protein RP026 640 NP_220420.1 1.992188 45654 E02 RP506 hypothetical protein RP506 640 NP_220882.1 2 ATP-dependent Clp protease 45690 E03 RP520 640 NP_220894.1 2 proteolytic subunit phosphatidylglycerophosphatase A 45651 E04 RP750 640 NP_221102.1 1.99375 (pgpA) 45595 E05 RP422 hypothetical protein RP422 646 NP_220803.1 1.993808 50S ribosomal protein L25/general 45406 E06 RP606 646 NP_220974.1 2 stress protein Ctc 45714 E07 RP616 hypothetical protein RP616 646 NP_220983.1 2 45682 E08 RP684 thymidylate kinase 646 NP_221045.1 1.993808 45518 E09 RP592 hypothetical protein RP592 649 NP_220961.1 2 45507 E10 RP860 hypothetical protein RP860 649 NP_221208.1 1.998459 45626 E11 RP345 30S ribosomal protein S4 652 NP_220728.1 1.993865 45498 E12 RP587 SCO2 protein precursor (sco2) 652 NP_220956.1 1.949387 45474 F01 RP790 NADH dehydrogenase subunit J 652 NP_221140.1 2 45702 F02 RP819 hypothetical protein RP819 652 NP_221168.1 1.993865 45422 F03 RP193 hypothetical protein RP193 658 NP_220582.1 2

BEI Resources E-mail: [email protected] www.beiresources.org Tel: 800-359-7370 Fax: 703-365-2898

© 2014 American Type Culture Collection (ATCC). All rights reserved. NR-19276_16JUN2014 Page 8 of 20

Master Clone List for NR-19276

Clone Well Locus ID Description ORF Length Accession Average Position Number Depth of Coverage 45398 F04 RP658 50S ribosomal protein L4 658 NP_221022.1 - 45382 F05 RP396 hypothetical protein RP396 661 NP_220777.1 1.993949 45430 F06 RP535 superoxide dismutase (sodB) 664 NP_220908.1 2 45662 F07 RP851 hypothetical protein RP851 664 NP_221199.1 2 outer membrane antigenic lipoprotein 45546 F08 RP300 667 NP_220684.1 2.991004 B precursor (nlpD) 45371 F09 RP434 hypothetical protein RP434 673 NP_220815.1 1.995542 45710 F10 RP854 hypothetical protein RP854 673 NP_221202.1 1.991085 45610 F11 RP391 hypothetical protein RP391 676 NP_220772.1 1.994083 45386 F12 RP638 adenylate kinase 676 NP_221002.1 2 45526 G01 RP864 hypothetical protein RP864 676 NP_221212.1 1.994083 ribosome biogenesis GTP-binding 45647 G02 RP102 679 NP_220494.1 2 protein YsxC 45635 G03 RP744 hypothetical protein RP744 682 NP_221096.1 1.991202 45494 G04 RP659 50S ribosomal protein L3 685 NP_221023.1 2 45699 G05 RP351 3-methyladenine DNA glycosylase 688 NP_220734.1 1.994186 45347 G06 RP653 30S ribosomal protein S3 688 NP_221017.1 1.988372 45450 G07 RP033 hypothetical protein RP033 691 NP_220427.1 1.994211 45427 G08 RP090 hypothetical protein RP090 691 NP_220483.1 1.991317 putative glutamine transport system 45707 G09 RP129 691 NP_220521.1 3.98987 permease protein GLNP (glnP) 45562 G10 RP363 hypothetical protein RP363 691 NP_220746.1 1.994211 45366 G11 RP030 hypothetical protein RP030 694 NP_220424.1 1.994236 45454 G12 RP413 hypothetical protein RP413 694 NP_220794.1 1.994236 45615 H01 RP522 cytidylate kinase 694 NP_220896.1 1.991354 45619 H02 RP231 hypothetical protein RP231 697 NP_220617.1 4 45719 H03 RP870 hypothetical protein RP870 697 NP_221218.1 3.929699 thiol:disulfide interchange protein 45578 H04 RP397 700 NP_220778.1 2 TLPA (tlpA) 45439 H05 RP631 hypothetical protein RP631 700 NP_220996.1 1.994286 glutamine transport ATP-binding 45694 H06 RP700 700 NP_221060.1 1.994286 protein GLNQ (glnQ1) 45599 H07 RP066 hypothetical protein RP066 703 NP_220460.1 1.99431 45558 H08 RP490 hypothetical protein RP490 703 NP_220867.1 1.99431 45727 H09 RP815 Maf-like protein 703 NP_221164.1 2 45894 H10 RP828 hypothetical protein RP828 703 NP_221177.1 3.607397 CDP-diacylglycerol--serine O- 45859 H11 RP242 709 NP_220627.1 1.991537 phosphatidyltransferase (pssA) 45863 H12 RP117 ribonuclease III 712 NP_220509.1 2

Table 5: Rickettsia prowazekii, Strain Madrid E, Gateway® Clone, Plate 5 (ZRPAE), NR-194531 Clone Well Locus ID Description ORF Length Accession Average Position Number Depth of Coverage 45815 A01 RP427 PETR protein (ompR) 712 NP_220808.1 1.994382 46102 A02 RP425 hypothetical protein RP425 715 NP_220806.1 3.986014 45746 A03 RP459 hypothetical protein RP459 715 NP_220839.1 1.538462 45899 A04 RP163 cell division protein FTSJ (ftsJ) 718 NP_220553.1 2.995822 45807 A05 RP694 hypothetical protein RP694 718 NP_221055.1 1.994429 46079 A06 RP277 hypothetical protein RP277 721 NP_220661.1 1.998613

BEI Resources E-mail: [email protected] www.beiresources.org Tel: 800-359-7370 Fax: 703-365-2898

© 2014 American Type Culture Collection (ATCC). All rights reserved. NR-19276_16JUN2014 Page 9 of 20

Master Clone List for NR-19276

Clone Well Locus ID Description ORF Length Accession Average Position Number Depth of Coverage phosphatidate cytidylyltransferase 45754 A07 RP424 721 NP_220805.1 1.535368 (cdsA) 45742 A08 RP732 DNA polymerase III subunit epsilon 724 NP_221085.1 2 46072 A09 RP830 HEME exporter protein C (ccmC) 727 NP_221179.1 4.22696 45874 A10 RP241 phosphatidylserine decarboxylase 730 NP_220626.1 2 45974 A11 RP473 hypothetical protein RP473 730 NP_220852.1 2 46010 A12 RP493 hypothetical protein RP493 730 NP_220869.1 2 45986 B01 RP867 hypothetical protein RP867 730 NP_221215.1 2 iron ABC transporter ATP-binding 45943 B02 RP834 736 NP_221183.1 1.990489 protein tRNA (guanine-N(1)-)- 45763 B03 RP111 739 NP_220503.1 1.987821 methyltransferase 45946 B04 RP607 hypothetical protein RP607 739 NP_220975.1 1.928281 45995 B05 RP544 hypothetical protein RP544 742 NP_220917.1 1.994609 phosphoribosylaminoimidazole- 45827 B06 RP220 745 NP_220606.1 1.836242 succinocarboxamide synthase 46006 B07 RP545 hypothetical protein RP545 745 NP_220918.1 1.994631 46063 B08 RP471 hypothetical protein RP471 751 NP_220850.1 2 45795 B09 RP148 dihydrodipicolinate reductase 754 NP_220539.1 1.994695 45750 B10 RP494 hypothetical protein RP494 757 NP_220870.1 1.993395 45790 B11 RP628 ribonuclease PH 757 NP_220993.1 2 glutamine transport ATP-binding 46026 B12 RP868 757 NP_221216.1 2 protein GLNQ (glnQ2) 45979 C01 RP035 acetoacetyl-CoA reductase 760 NP_220429.1 2 amino-acid ABC transporter binding 45835 C02 RP150 760 NP_220541.1 1.986842 protein (yqiX) 45970 C03 RP309 TOLQ protein (tolQ) 760 NP_220693.1 2 3-ketoacyl-(acyl-carrier-protein) 45851 C04 RP762 760 NP_221114.1 3.967105 reductase 46022 C05 RP023 F0F1 ATP synthase subunit A 763 NP_220417.1 2 46098 C06 RP155 uridylate kinase 763 NP_220546.1 3.994758 46046 C07 RP289 hypothetical protein RP289 766 NP_220673.1 1.994778 1-acyl-SN-glycerol-3-phosphate 45731 C08 RP469 766 NP_220848.1 3.792428 acyltransferase 45903 C09 RP733 surfeit locus protein 1 (surf1) 769 NP_221086.1 1.992198 extragenic suppressor protein SUHB 45982 C10 RP239 772 NP_220624.1 2 (suhB) 45854 C11 RP125 hypothetical protein RP125 778 NP_220517.1 2 45810 C12 RP287 VirB8 778 NP_220671.1 2 46035 D01 RP401 hypothetical protein RP401 778 NP_220782.1 2 46038 D02 RP591 hypothetical protein RP591 781 NP_220960.1 2 45962 D03 RP664 hypothetical protein RP664 781 NP_221026.1 2 46054 D04 RP827 hypothetical protein RP827 781 NP_221176.1 2 UDP-N-acetylglucosamine 45934 D05 RP454 784 NP_220834.1 1.994898 pyrophosphorylase (glmU) 45830 D06 RP869 hypothetical protein RP869 784 NP_221217.1 1.994898 45938 D07 RP028 hypothetical protein RP028 787 NP_220422.1 3.947903 45926 D08 RP230 hypothetical protein RP230 787 NP_220616.1 1.994917 45722 D09 RP093 VACJ lipoprotein precursor (vacJ) 790 NP_220486.1 2 45759 D10 RP183 hypothetical protein RP183 790 NP_220572.1 1.916456 45891 D11 RP782 muropeptide permease AmpG 790 NP_221132.1 1.994937 O-antigen export system ATP-binding 46050 D12 RP003 793 NP_220399.1 2 protein RFBE (rfbE)

BEI Resources E-mail: [email protected] www.beiresources.org Tel: 800-359-7370 Fax: 703-365-2898

© 2014 American Type Culture Collection (ATCC). All rights reserved. NR-19276_16JUN2014 Page 10 of 20

Master Clone List for NR-19276

Clone Well Locus ID Description ORF Length Accession Average Position Number Depth of Coverage 45914 E01 RP027 hypothetical protein RP027 793 NP_220421.1 1.994956 ribonucleotide ABC transporter ATP- 46058 E02 RP097 793 NP_220490.1 2 binding protein 45923 E03 RP343 hypothetical protein RP343 793 NP_220726.1 1.994956 45866 E04 RP455 hypothetical protein RP455 793 NP_220835.1 2 3-demethylubiquinone-9 3- 46031 E05 RP622 793 NP_220989.1 2.839849 methyltransferase cytochrome C1, HEME protein 46082 E06 RP272 796 NP_220657.1 1.993719 precursor (fbcH) 45911 E07 RP621 hypothetical protein RP621 796 NP_220988.1 2 45844 E08 RP857 tRNA pseudouridine synthase A 796 NP_221205.1 4.180905 45818 E09 RP508 ABC transporter ATP-binding protein 799 NP_220884.1 1.993742 inorganic polyphosphate/ATP-NAD 45798 E10 RP440 802 NP_220821.1 1.995012 kinase 45774 E11 RP845 hypothetical protein RP845 811 NP_221193.1 2 45931 E12 RP096 hypothetical protein RP096 814 NP_220489.1 3.895577 45870 F01 RP824 methionine aminopeptidase 814 NP_221173.1 2 succinate dehydrogenase iron-sulfur 46042 F02 RP044 820 NP_220438.1 1.993902 subunit 46020 F03 RP260 exodeoxyribonuclease III (xthA1) 820 NP_220645.1 4.179268 45998 F04 RP365 enoyl-(acyl carrier protein) reductase 820 NP_220748.1 1.995122 3'-phosphoadenosine-5'- 46075 F05 RP297 phosphosulfate (PAPS) 3'- 823 NP_220681.1 2 UDP-N-acetylglucosamine 45779 F06 RP007 829 NP_220403.1 1.992762 acyltransferase 46002 F07 RP116 signal peptidase I (lepB) 829 NP_220508.1 1.995175 45738 F08 RP143 hypothetical protein RP143 829 NP_220534.1 1.993969 ubiquinone/menaquinone 45734 F09 RP680 832 NP_221041.1 1.995192 biosynthesis methyltransferase 45847 F10 RP075 hypothetical protein RP075 838 NP_220469.1 1.995227 45990 F11 RP250 cell division protein FTSQ (ftsQ) 838 NP_220635.1 2 prolipoprotein diacylglyceryl 45918 F12 RP046 841 NP_220440.1 2 transferase 45906 G01 RP533 biotin--protein ligase 841 NP_220906.1 2 46014 G02 RP672 dimethyladenosine transferase 841 NP_221033.1 2 45959 G03 RP172 DNA polymerase III subunit delta' 844 NP_220562.1 1.994076 45887 G04 RP474 hypothetical protein RP474 844 NP_220853.1 2.809242 45879 G05 RP676 exodeoxyribonuclease III (xthA2) 844 NP_221037.1 1.991706 45787 G06 RP415 diaminopimelate epimerase 847 NP_220796.1 2.819362 45955 G07 RP730 hypothetical protein RP730 847 NP_221083.1 3.034238 45770 G08 RP025 hypothetical protein RP025 853 NP_220419.1 3.118406 45883 G09 RP001 hypothetical protein RP001 856 NP_220397.1 1.991822 45803 G10 RP072 7-cyano-7-deazaguanine reductase 856 NP_220466.1 4.01986 46094 G11 RP656 50S ribosomal protein L2 856 NP_221020.1 3.535589 45950 G12 RP837 hypothetical protein RP837 856 NP_221186.1 3.165888 2,3,4,5-tetrahydropyridine-2,6- 45782 H01 RP194 859 NP_220583.1 3.777648 carboxylate N-succinyltransferase 46086 H02 RP296 hypothetical protein RP296 859 NP_220680.1 2 2-dehydro-3-deoxyphosphooctonate 46090 H03 RP062 862 NP_220456.1 1.975638 aldolase 45839 H04 RP463 hypothetical protein RP463 865 NP_220843.1 3.574566 46211 H05 RP495 hypothetical protein RP495 865 NP_220871.1 1.927168

BEI Resources E-mail: [email protected] www.beiresources.org Tel: 800-359-7370 Fax: 703-365-2898

© 2014 American Type Culture Collection (ATCC). All rights reserved. NR-19276_16JUN2014 Page 11 of 20

Master Clone List for NR-19276

Clone Well Locus ID Description ORF Length Accession Average Position Number Depth of Coverage cytochrome C oxidase polypeptide III 46387 H06 RP191 871 NP_220580.1 1.95178 (coxC) 46275 H07 RP882 coproporphyrinogen III oxidase 874 NP_221228.1 1.994279 46115 H08 RP368 hypothetical protein RP368 877 NP_220751.1 3.868871 46139 H09 RP446 glycosyl transferase (lgtD) 877 NP_220827.1 2 46162 H10 RP747 hypothetical protein RP747 877 NP_221099.1 2.141391 46330 H11 RP404 hypothetical protein RP404 880 NP_220785.1 2.15 46455 H12 RP462 ribonuclease D (RND) 880 NP_220842.1 3.743182

Table 6: Rickettsia prowazekii, Strain Madrid E, Gateway® Clone, Plate 6 (ZRPAF), NR-194541 Clone Well Locus ID Description ORF Length Accession Average Position Number Depth of Coverage protein export protein PRSA 46415 A01 RP576 883 NP_220947.1 3.654977 precursor (prsA) 4-hydroxybenzoate 46479 A02 RP686 883 NP_221047.1 2.507412 polyprenyltransferase 46282 A03 RP332 hypothetical protein RP332 889 NP_220715.1 3.391451 46482 A04 RP496 hypothetical protein RP496 892 NP_220872.1 1.9787 46197 A05 RP059 stage 0 sporulation protein J (spo0J) 895 NP_220453.1 4.158659 46346 A06 RP123 HFLC protein (hflC) 895 NP_220515.1 2.167598 46290 A07 RP581 hypothetical protein RP581 895 NP_220952.1 2.185475 46227 A08 RP254 UDP-3-O- 901 NP_220639.1 3.826859 46311 A09 RP489 hypothetical protein RP489 901 NP_220866.1 4.135405 46299 A10 RP850 glycyl-tRNA synthetase subunit alpha 904 NP_221198.1 3.568584 branched-chain amino acid 46471 A11 RP428 907 NP_220809.1 1.942668 aminotransferase 46463 A12 RP218 hypothetical protein RP218 913 NP_220604.1 4.143483 succinyl-CoA synthetase subunit 46239 B01 RP432 913 NP_220813.1 4.46988 alpha 46215 B02 RP303 RNA polymerase factor sigma-32 916 NP_220687.1 1.870087 46247 B03 RP444 hypothetical protein RP444 916 NP_220825.1 1.995633 46475 B04 RP682 hypothetical protein RP682 916 NP_221043.1 1.99345 46351 B05 RP301 FAD-dependent thymidylate synthase 919 NP_220685.1 3.732318 46363 B06 RP429 dihydrodipicolinate synthase 919 NP_220810.1 4.131665 46106 B07 RP005 hypothetical protein RP005 922 NP_220401.1 2.614967 46486 B08 RP118 GTP-binding protein Era 922 NP_220510.1 1.573753 46191 B09 RP673 hypothetical protein RP673 922 NP_221034.1 3.801518 46431 B10 RP086 30S ribosomal protein S2 925 NP_220479.1 1.977297 46127 B11 RP742 lipoyl synthase 928 NP_221094.1 4.588362 46186 B12 RP786 hypothetical protein RP785 928 NP_221136.1 2.02694 46159 C01 RP295 hypothetical protein RP295 931 NP_220679.1 3.988185 46427 C02 RP014 hypothetical protein RP014 934 NP_220409.1 2.762313 46145 C03 RP466 porphobilinogen deaminase 934 NP_220846.1 4.167024 46391 C04 RP832 protein P34 (p34) 937 NP_221181.1 3.533618 46459 C05 RP016 hypothetical protein RP016 943 NP_220411.1 1.962884 46411 C06 RP209 methionyl-tRNA formyltransferase 946 NP_220597.1 2 46451 C07 RP258 hypothetical protein RP258 946 NP_220643.1 3.991543

BEI Resources E-mail: [email protected] www.beiresources.org Tel: 800-359-7370 Fax: 703-365-2898

© 2014 American Type Culture Collection (ATCC). All rights reserved. NR-19276_16JUN2014 Page 12 of 20

Master Clone List for NR-19276

Clone Well Locus ID Description ORF Length Accession Average Position Number Depth of Coverage 46367 C08 RP367 hypothetical protein RP367 946 NP_220750.1 4.062368 46235 C09 RP740 hemolysin C (tlyC) 946 NP_221092.1 3.884778 46286 C10 RP525 protease IV (sppA) 952 NP_220898.1 2.163866 site-specific tyrosine recombinase 46295 C11 RP817 952 NP_221166.1 3.013655 XerC penicillin-binding protein DACF 46167 C12 RP389 955 NP_220770.1 3.118325 precursor (dacF) 46434 D01 RP569 S-adenosyl-methyltransferase MraW 955 NP_220941.1 2.009424 46278 D02 RP443 hypothetical protein RP443 964 NP_220824.1 2.048755 UDP-N- 46343 D03 RP248 acetylenolpyruvoylglucosamine 967 NP_220633.1 3.619442 reductase 46319 D04 RP346 protoheme IX farnesyltransferase 967 NP_220729.1 4.459152 46355 D05 RP445 thioredoxin reductase (trxB1) 967 NP_220826.1 3.509824 bifunctional 5,10-methylene- tetrahydrofolate dehydrogenase/ 46303 D06 RP515 967 NP_220891.1 3.541882 5,10-methylene-tetrahydrofolate cyclohydrolase 46123 D07 RP114 preprotein translocase subunit SecF 970 NP_220506.1 3.297938 tRNA delta(2)- 46447 D08 RP510 isopentenylpyrophosphate 970 NP_220886.1 1.9 transferase 46370 D09 RP197 hypothetical protein RP197 976 NP_220585.1 2.155738 cytochrome C oxidase polypeptide II 46439 D10 RP406 976 NP_220787.1 3.815574 (coxB) 46422 D11 RP846 pseudouridylate synthase 976 NP_221194.1 2.143443 46327 D12 RP376 malate dehydrogenase 979 NP_220759.1 3.552605 46378 E01 RP706 hypothetical protein RP706 979 NP_221065.1 1.930541 46359 E02 RP186 protease DO (htrA) 982 NP_220575.1 5.117108 NAD(P)H-dependent glycerol-3- 46383 E03 RP442 985 NP_220823.1 3.93002 phosphate dehydrogenase 46258 E04 RP402 hypothetical protein RP402 988 NP_220783.1 2.071862 3-oxoacyl-(acyl carrier protein) 46407 E05 RP772 988 NP_221123.1 3.245951 synthase III 46403 E06 RP121 hypothetical protein RP121 991 NP_220513.1 1.961655 minor teichoic acids biosynthesis 46198 E07 RP339 991 NP_220722.1 3.696266 protein ggab (ggab) 46271 E08 RP505 arabinose-5-phosphate isomerase 994 NP_220881.1 4.172032 46243 E09 RP701 hypothetical protein RP701 994 NP_221061.1 3.28672 acyl-carrier-protein S- 46183 E10 RP735 994 NP_221088.1 3.34004 malonyltransferase 46203 E11 RP390 rare lipoprotein A precursor (rlpA) 997 NP_220771.1 3.38014 46250 E12 RP249 D-alanine--D-alanine ligase 1000 NP_220634.1 2.008 46223 F01 RP305 hypothetical protein RP305 1003 NP_220689.1 1.918245 46208 F02 RP853 hypothetical protein RP853 1003 NP_221201.1 3.360917 46257 F03 RP372 hypothetical protein RP372 1006 NP_220755.1 4.120278 ribonucleotide-diphosphate reductase 46322 F04 RP512 1009 NP_220888.1 1.751239 subunit beta 46155 F05 RP719 tetraacyldisaccharide 4'-kinase 1012 NP_221074.1 1.866601 pyruvate dehydrogenase E1 46175 F06 RP261 component, alpha subunit 1015 NP_220646.1 3.285714 precursor (pdhA)

BEI Resources E-mail: [email protected] www.beiresources.org Tel: 800-359-7370 Fax: 703-365-2898

© 2014 American Type Culture Collection (ATCC). All rights reserved. NR-19276_16JUN2014 Page 13 of 20

Master Clone List for NR-19276

Clone Well Locus ID Description ORF Length Accession Average Position Number Depth of Coverage 46335 F07 RP262 pyruvate dehydrogenase subunit beta 1015 NP_220647.1 2.669634 undecaprenyl-phosphate alpha-N- 46399 F08 RP825 acetylglucosaminyltransferase 1015 NP_221174.1 4.153695 (mraY2) octaprenyl-diphosphate synthase 46468 F09 RP479 1018 NP_220858.1 4.049116 (ispB) 46178 F10 RP564 hypothetical protein RP564 1018 NP_220936.1 2.128684 46375 F11 RP468 tryptophanyl-tRNA synthetase 1027 NP_220847.1 3.251217 46339 F12 RP539 delta-aminolevulinic acid dehydratase 1027 NP_220912.1 3.822785 46231 G01 RP395 hypothetical protein RP395 1036 NP_220776.1 3.939189 46266 G02 RP449 threonine dehydratase 1036 NP_220830.1 3.925676 46262 G03 RP092 hypothetical protein RP092 1039 NP_220485.1 1.787295 cytochrome C oxidase assembly 46146 G04 RP257 1039 NP_220642.1 4.638114 protei (coxW) type IV secretion system ATPase 46134 G05 RP292 1039 NP_220676.1 4.682387 VirB11 46315 G06 RP472 hypothetical protein RP472 1039 NP_220851.1 1.748797 46111 G07 RP514 thioredoxin reductase (trxB2) 1039 NP_220890.1 3.304139 site-specific tyrosine recombinase 46419 G08 RP361 1042 NP_220744.2 1.712092 XerD aspartate-semialdehyde 46170 G09 RP316 1051 NP_220699.1 1.683159 dehydrogenase 46394 G10 RP340 hypothetical protein RP340 1051 NP_220723.1 4.782112 46590 G11 RP414 CAPM protein (capM2) 1051 NP_220795.1 1.747859 cytochrome D ubiquinol oxidase 46535 G12 RP217 1054 NP_220603.1 1.767552 subunit II (cydB) poly-BETA-hydroxybutyrate 46721 H01 RP738 1054 NP_221090.1 5.132827 polymerase (phbC1) 46563 H02 RP796 NADH dehydrogenase subunit H 1054 NP_221146.1 1.832068 46627 H03 RP322 hypothetical protein RP322 1057 NP_220705.1 3.190161 DNA-directed RNA polymerase 46614 H04 RP635 1057 NP_220999.1 1.748344 subunit alpha 46687 H05 RP761 recombinase A 1057 NP_221113.1 2.552182 46862 H06 RP081 190 kDa antigen precursor 1060 NP_220474.1 1.712264 capsular polysaccharide biosynthesis 46498 H07 RP333 1060 NP_220716.1 4.876415 protein CapD 46710 H08 RP386 Holliday junction DNA helicase RuvB 1063 NP_220767.1 1.632173 isopentenyl pyrophosphate 46642 H09 RP452 1063 NP_220833.1 3.877705 isomerase 46623 H10 RP122 HFLK protein (hflK) 1069 NP_220514.1 4.624883 46638 H11 RP885 uroporphyrinogen decarboxylase 1072 NP_221231.1 4.130597 46503 H12 RP009 UDP-3-O- 1075 NP_220405.1 1.655814

Table 7: Rickettsia prowazekii, Strain Madrid E, Gateway® Clone, Plate 7 (ZRPAG), NR-194551 Clone Well Locus ID Description ORF Length Accession Average Position Number Depth of Coverage 46726 A01 RP018 190 kDa antigen precursor 1078 NP_220413.1 1.735622 46782 A02 RP338 hypothetical protein RP338 1078 NP_220721.1 1.752319 putative monovalent cation/H+ 46599 A03 RP267 1081 NP_220652.1 3.130435 antiporter subunit B

BEI Resources E-mail: [email protected] www.beiresources.org Tel: 800-359-7370 Fax: 703-365-2898

© 2014 American Type Culture Collection (ATCC). All rights reserved. NR-19276_16JUN2014 Page 14 of 20

Master Clone List for NR-19276

Clone Well Locus ID Description ORF Length Accession Average Position Number Depth of Coverage 46526 A04 RP243 multidrug resistance protein A (emrA) 1087 NP_220628.1 1.716651 phenylalanyl-tRNA synthetase 46491 A05 RP417 1087 NP_220798.1 1.661454 subunit alpha 46811 A06 RP109 phosphate acetyltransferase 1090 NP_220501.1 1.76151 46650 A07 RP630 putative permease PerM 1090 NP_220995.1 1.644954 46666 A08 RP198 hypothetical protein RP198 1102 NP_220586.1 3.050817 46770 A09 RP529 peptide chain release factor 1 1102 NP_220902.1 4.279492 46747 A10 RP012 hypothetical protein RP012 1108 NP_220407.1 3.113718 46742 A11 RP212 putative ATPase N2B (n2B) 1108 NP_220598.1 1.674524 46823 A12 RP045 hypothetical protein RP045 1111 NP_220439.1 2.36241 46635 B01 RP306 tRNA-specific 2-thiouridylase MnmA 1111 NP_220690.1 3.114311 46839 B02 RP161 hypothetical protein RP161 1114 NP_220551.1 3.156194 46531 B03 RP029 recombination protein F 1117 NP_220423.1 2.417189 46778 B04 RP871 hypothetical protein RP871 1117 NP_221219.1 4.409132 phospho-N-acetylmuramoyl- 46539 B05 RP595 1120 NP_220963.1 1.7375 pentapeptide-transferase 46654 B06 RP721 queuine tRNA-ribosyltransferase 1120 NP_221076.1 1.633929 46682 B07 RP769 hypothetical protein RP769 1123 NP_221121.1 1.632235 GTP-dependent nucleic acid-binding 46519 B08 RP604 1132 NP_220972.1 1.60689 protein EngD 46795 B09 RP165 hypothetical protein RP165 1141 NP_220555.1 1.499562 46546 B10 RP274 peptide chain release factor 2 1145 - 4.300437 46542 B11 RP184 chaperone protein DnaJ 1147 NP_220573.1 4.761116 46807 B12 RP278 hypothetical protein RP278 1150 NP_220662.1 1.555652 46706 C01 RP748 hypothetical protein RP748 1150 NP_221100.1 2.97302 46703 C02 RP335 hypothetical protein RP335 1156 NP_220718.1 3.026817 46731 C03 RP760 hypothetical protein RP760 1156 NP_221112.1 3.722318 putative UDP-N-acetylglucosamine 2- 46759 C04 RP334 1165 NP_220717.1 1.663519 epimerase (rffE) 46855 C05 RP487 NifS protein 1165 NP_220864.1 4.681545 46631 C06 RP411 cell division protein FTSW (ftsW) 1168 NP_220792.1 2.895548 46607 C07 RP678 hypothetical protein RP678 1174 NP_221039.1 3.68569 46523 C08 RP321 lipid-A-disaccharide synthase 1177 NP_220704.1 2.846285 46819 C09 RP255 hypothetical protein RP255 1180 NP_220640.1 1.448305 46767 C10 RP419 DNA polymerase III subunit beta 1180 NP_220800.1 1.499574 deoxyguanosinetriphosphate 46851 C11 RP064 1186 NP_220458.1 2.910624 triphosphohydrolase-like protein S-adenosylmethionine:tRNA 46751 C12 RP213 1186 NP_220599.1 1.626476 ribosyltransferase-isomerase rod shape-determining protein RODA 46786 D01 RP280 1186 NP_220664.1 1.586003 (rodA) 46815 D02 RP863 alanine dehydrogenase PntAa 1186 NP_221211.1 4.74199 succinyl-diaminopimelate 46575 D03 RP874 1186 NP_221221.1 2.939292 desuccinylase 46514 D04 RP110 acetate kinase (ackA) 1192 NP_220502.1 2.822987 undecaprenyldiphospho- 46691 D05 RP412 muramoylpentapeptide beta-N- 1192 NP_220793.1 1.578859 acetylglucosaminyltransferase 46586 D06 RP364 hypothetical protein RP364 1195 NP_220747.1 4.009205 46619 D07 RP433 succinyl-CoA synthetase subunit beta 1195 NP_220814.1 1.442678 46755 D08 RP015 poly(A) polymerase (pcnB) 1198 NP_220410.1 3.887866 putative DNA-binding/iron 46555 D09 RP037 1198 NP_220431.1 2.678631 metalloprotein/AP endonuclease

BEI Resources E-mail: [email protected] www.beiresources.org Tel: 800-359-7370 Fax: 703-365-2898

© 2014 American Type Culture Collection (ATCC). All rights reserved. NR-19276_16JUN2014 Page 15 of 20

Master Clone List for NR-19276

Clone Well Locus ID Description ORF Length Accession Average Position Number Depth of Coverage 46735 D10 RP047 hypothetical protein RP047 1201 NP_220441.1 4.633639 46871 D11 RP344 CAPM protein (capM1) 1204 NP_220727.1 4.548173 46834 D12 RP439 hypothetical protein RP439 1210 NP_220820.1 1.529752 46798 E01 RP698 bicyclomycin resistance protein (bcr2) 1210 NP_221058.1 4.624793 46698 E02 RP737 acetyl-CoA acetyltransferase 1213 NP_221089.1 1.546579 46803 E03 RP661 elongation factor Tu 1219 NP_221025.1 1.518458 46566 E04 RP038 acyl-COA desaturase 1 (aco1) 1222 NP_220432.1 1.51964 46695 E05 RP223 hypothetical protein RP223 1231 NP_220609.1 1.559708 46594 E06 RP271 cytochrome B (petB) 1231 NP_220656.1 1.501219 46507 E07 RP175 coproporphyrinogen III oxidase 1234 NP_220565.1 3.623987 46830 E08 RP179 dihydrolipoamide succinyltransferase 1240 NP_220569.1 4.748382 46570 E09 RP337 hypothetical protein RP337 1246 NP_220720.1 1.421348 46610 E10 RP095 alanine racemase 1249 NP_220488.1 2.6672 46679 E11 RP375 proline/betaine transporter (proP3) 1255 NP_220758.1 3.172112 46722 E12 RP246 hypothetical protein RP246 1258 NP_220631.1 2.72496 46858 F01 RP336 hypothetical protein RP336 1258 NP_220719.1 1.461722 46791 F02 RP603 bicyclomycin resistance protein (bcr1) 1258 NP_220971.1 1.510334 putative ATP-dependent RNA 46739 F03 RP669 1258 NP_221031.1 4.507154 helicase RHLE (rhlE) 46579 F04 RP668 muropeptide permease AmpG 1261 NP_221030.1 2.691515 46847 F05 RP486 cysteine desulfurase 1267 NP_220863.1 1.43015 46774 F06 RP556 tyrosyl-tRNA synthetase 1270 NP_220928.1 1.389764 46866 F07 RP091 aspartate aminotransferase 1273 NP_220484.1 1.357199 46510 F08 RP219 protease 1273 NP_220605.1 1.455617 46559 F09 RP259 penicillin-binding protein 4* (pbpE) 1279 NP_220644.1 1.352619 46762 F10 RP841 5-aminolevulinate synthase 1279 NP_221189.1 3.366693 46646 F11 RP232 hypothetical protein RP232 1282 NP_220618.1 2.655226 46827 F12 RP699 hypothetical protein RP699 1282 NP_221059.1 2.076443 46583 G01 RP852 proline/betaine transporter (proP6) 1282 NP_221200.1 1.438378 46662 G02 RP308 histidyl-tRNA synthetase 1285 NP_220692.1 1.442802 46495 G03 RP077 proline/betaine transporter (proP1) 1291 NP_220471.1 2.011619 UDP-N-acetylglucosamine 1- 46603 G04 RP579 1294 NP_220950.1 2.559073 carboxyvinyltransferase 46842 G05 RP743 serine hydroxymethyltransferase 1297 NP_221095.1 1.377024 46671 G06 RP115 NADH dehydrogenase I subunit F 1300 NP_220507.1 4.432308 46675 G07 RP416 hypothetical protein RP416 1300 NP_220797.1 1.304615 47026 G08 RP781 hypothetical protein RP780 1300 NP_221131.1 3.479231 47142 G09 RP681 hypothetical protein RP681 1306 NP_221042.1 1.405054 47015 G10 RP881 proline/betaine transporter (proP7) 1306 NP_221227.1 2.585758 47160 G11 RP702 hypothetical protein RP702 1309 NP_221062.1 4.576012 47075 G12 RP783 hypothetical protein RP782 1312 NP_221133.1 2.495427 46891 H01 RP690 hypothetical protein RP690 1315 NP_221051.1 3.870722 47134 H02 RP755 proline/betaine transporter (proP5) 1315 NP_221107.1 4.474525 3-oxoacyl-(acyl carrier protein) 46987 H03 RP764 1315 NP_221116.1 4.525475 synthase II glycerol-3-phosphate transporter 47030 H04 RP054 1324 NP_220448.1 4.481118 (glpT) 47006 H05 RP483 putrescine-ornithine antiporter (potE) 1324 NP_220860.1 3.033208 putative monovalent cation/H+ 47050 H06 RP284 1333 NP_220668.1 2.469617 antiporter subunit D 47154 H07 RP384 prolyl-tRNA synthetase 1333 NP_220765.1 3.452363 47042 H08 RP536 folylpolyglutamate synthase (folC) 1336 NP_220909.1 3.497006

BEI Resources E-mail: [email protected] www.beiresources.org Tel: 800-359-7370 Fax: 703-365-2898

© 2014 American Type Culture Collection (ATCC). All rights reserved. NR-19276_16JUN2014 Page 16 of 20

Master Clone List for NR-19276

Clone Well Locus ID Description ORF Length Accession Average Position Number Depth of Coverage 47171 H09 RP779 DNA polymerase III subunit alpha 1339 NP_221129.1 2.595967 47175 H10 RP844 type II citrate synthase 1345 NP_221192.1 2.441636 osmolarity sensor protein ENVZ 46963 H11 RP426 1348 NP_220807.1 2.557864 (envZ) 47179 H12 RP685 proline/betaine transporter (proP4) 1351 NP_221046.1 1.431532

Table 8: Rickettsia prowazekii, Strain Madrid E, Gateway® Clone, Plate 8 (ZRPAH), NR-194561 Clone Well Locus ID Description ORF Length Accession Average Position Number Depth of Coverage 47162 A01 RP527 hypothetical protein RP527 1354 NP_220900.1 1.384786 47131 A02 RP034 hypothetical protein RP034 1357 NP_220428.1 2.470155 47046 A03 RP068 hypothetical protein RP068 1357 NP_220462.1 1.355195 46946 A04 RP228 tail-specific protease precursor (CTP) 1360 NP_220614.1 4.323529 46906 A05 RP313 proline/BETAIN transporter (proP2) 1363 NP_220696.1 5.250183 47246 A06 RP302 translocation protein TolB 1366 NP_220686.1 3.818448 47183 A07 RP759 tRNA modification GTPase TrmE 1372 NP_221111.1 3.115889 (dimethylallyl)adenosine tRNA 46914 A08 RP808 1372 NP_221158.1 1.341837 methylthiotransferase 47090 A09 RP842 trigger factor 1372 NP_221190.1 4.251458 47206 A10 RP753 aspartate kinase 1375 NP_221105.1 4.487273 47002 A11 RP325 glutamyl-tRNA synthetase 1378 NP_220708.1 1.365022 47118 A12 RP546 DNA repair protein RadA 1381 NP_220919.1 1.353367 47251 B01 RP173 signal recognition particle protein 1384 NP_220563.1 2.45448 UDP-N-acetylmuramoylalanyl-D- 46879 B02 RP596 glutamyl- 2,6-diaminopimelate--D- 1384 NP_220964.1 2.519509 alanyl-D-alanyl ligase (murF) 46978 B03 RP237 response regulator PleD 1387 NP_220622.1 2.471521 47226 B04 RP475 muropeptide permease AmpG 1393 NP_220854.1 1.309404 47098 B05 RP666 cell division protein FtsZ 1393 NP_221028.1 4.003589 cytochrome D ubiquinol oxidase 47010 B06 RP216 1396 NP_220602.1 2.363181 subunit I exodeoxyribonuclease VII large 46999 B07 RP675 1396 NP_221036.1 1.742837 subunit 47102 B08 RP448 hypothetical protein RP448 1399 NP_220829.1 2.414582 46885 B09 RP526 transcription termination factor Rho 1408 NP_220899.1 4.365057 46990 B10 RP407 hypothetical protein RP407 1411 NP_220788.1 4.231751 47062 B11 RP805 dihydrolipoamide dehydrogenase 1414 NP_221155.1 1.350071 3-deoxy-D-manno-octulosonic-acid 46955 B12 RP089 1420 NP_220482.1 1.326761 transferase sodium/pantothenate symporter 46887 C01 RP571 1420 NP_220943.1 4.417606 (panF) 46911 C02 RP665 fumarate hydratase 1420 NP_221027.1 4.302817 NAD(P) transhydrogenase subunit 47167 C03 RP074 1432 NP_220468.1 4.291201 BETA (pntB) guanosine pentaphosphate 47055 C04 RP294 1447 NP_220678.1 1.299931 phosphohydrolase (gppA) 47198 C05 RP623 glutamyl-tRNA synthetase 1447 NP_220990.1 3.866621 UDP-N-acetylmuramoylalanyl-D- 46983 C06 RP597 glutamate--2,6-diaminopimelate 1477 NP_220965.1 1.299255 ligase

BEI Resources E-mail: [email protected] www.beiresources.org Tel: 800-359-7370 Fax: 703-365-2898

© 2014 American Type Culture Collection (ATCC). All rights reserved. NR-19276_16JUN2014 Page 17 of 20

Master Clone List for NR-19276

Clone Well Locus ID Description ORF Length Accession Average Position Number Depth of Coverage aspartyl/glutamyl-tRNA 47034 C07 RP151 1486 NP_220542.1 1.251009 amidotransferase subunit B 47114 C08 RP265 isocitrate dehydrogenase 1486 NP_220650.1 2.2786 46977 C09 RP291 VIRB10 protein (virB10) 1486 NP_220675.1 4.333782 putative monovalent cation/H+ 47038 C10 RP283 1495 NP_220667.1 2.274247 antiporter subunit D 47070 C11 RP542 replicative DNA helicase 1495 NP_220915.1 3.854181 46938 C12 RP793 NADH dehydrogenase subunit M 1510 NP_221143.1 1.240397 47110 D01 RP821 hypothetical protein RP821 1513 NP_221170.1 4.171183 aspartyl/glutamyl-tRNA 47087 D02 RP152 1516 NP_220543.1 1.205145 amidotransferase subunit A 46970 D03 RP602 patatin B1 precursor (pat1) 1519 NP_220970.1 2.229098 UDP-N-acetylmuramate--L-alanine 47222 D04 RP247 1522 NP_220632.1 1.13929 ligase 47023 D05 RP366 apolipoprotein N-acyltransferase 1525 NP_220749.1 3.877377 46930 D06 RP229 histidine kinase sensor protein (barA) 1528 NP_220615.1 3.295812 47230 D07 RP053 ADP,ATP carrier protein 1531 NP_220447.1 3.856303 46934 D08 RP142 leucyl aminopeptidase 1537 NP_220533.1 1.207547 47210 D09 RP739 ADP,ATP carrier protein 1537 NP_221091.1 1.216005 47239 D10 RP477 ADP,ATP carrier protein 1540 NP_220856.1 1.185714 46994 D11 RP590 virulence factor MVIN (mviN) 1558 NP_220959.1 1.19448 47083 D12 RP509 phosphomannomutase (exoC) 1561 NP_220885.1 1.718129 46927 E01 RP683 methionyl-tRNA synthetase 1561 NP_221044.1 2.15631 47122 E02 RP382 hypothetical protein RP382 1567 NP_220763.1 1.150606 alkaline protease secretion protein 46943 E03 RP314 1570 NP_220697.1 1.592214 AprE 47078 E04 RP500 ADP,ATP carrier protein 1573 NP_220876.1 4.902098 47126 E05 RP803 F0F1 ATP synthase subunit alpha 1573 NP_221153.1 5.331214 putative monovalent cation/H+ 47094 E06 RP282 1576 NP_220666.1 3.857234 antiporter subunit D propionyl-COA carboxylase BETA 47150 E07 RP619 1579 NP_220986.1 4.937302 chain precursor (pccB) lipopolysaccharide 1,2- 47059 E08 RP476 1588 NP_220855.1 2.670655 glucosyltransferase (rfaJ) 47191 E09 RP586 preprotein translocase subunit SecD 1591 NP_220955.1 1.686989 bifunctional N5-glutamine S- adenosyl-L-methionine-dependent 46924 E10 RP847 1591 NP_221195.1 4.423633 methyltransferase/tRNA (m7G46) methyltransferase 47220 E11 RP157 multidrug resistance protein B (emrB) 1594 NP_220548.1 5.033877 47234 E12 RP329 hypothetical protein RP329 1597 NP_220712.1 4.99186 46950 F01 RP855 hypothetical protein RP855 1597 NP_221203.1 4.336255 46966 F02 RP371 lysyl-tRNA synthetase 1621 NP_220754.1 3.951265 46874 F03 RP405 cytochrome c oxidase polypeptide I 1639 NP_220786.1 4.253813 DNA polymerase III subunits gamma 46902 F04 RP865 1660 NP_221213.1 4.195783 and tau 47106 F05 RP214 ABC transporter ATP-binding protein 1681 NP_220600.1 3.992861 47066 F06 RP789 hypothetical protein RP789 1696 NP_221139.1 3.585495 47242 F07 RP182 DNA repair protein RECN (recN) 1699 NP_220571.1 4.691583 46960 F08 RP478 hypothetical protein RP478 1699 NP_220857.1 4.187758 putative inner membrane protein 46918 F09 RP048 1717 NP_220442.1 3.931275 translocase component YidC 47186 F10 RP441 hypothetical protein RP441 1717 NP_220822.1 4.848573

BEI Resources E-mail: [email protected] www.beiresources.org Tel: 800-359-7370 Fax: 703-365-2898

© 2014 American Type Culture Collection (ATCC). All rights reserved. NR-19276_16JUN2014 Page 18 of 20

Master Clone List for NR-19276

Clone Well Locus ID Description ORF Length Accession Average Position Number Depth of Coverage 46894 F11 RP567 penicillin binding protein (pbpA2) 1720 NP_220939.1 3.586047 46898 F12 RP612 hypothetical protein RP612 1741 NP_220980.1 4.497415 glutathione-regulated potassium- 47138 G01 RP810 1762 NP_221160.1 5.150312 efflux system protein KEFB (kefB) 47255 G02 RP065 arginyl-tRNA synthetase 1765 NP_220459.1 1.012465 alkaline protease secretion ATP- 47020 G03 RP315 1786 NP_220698.1 4.568309 binding protein AprD 47214 G04 RP378 CTP synthetase 1795 NP_220761.1 4.358774 single-stranded-DNA-specific 47485 G05 RP528 1795 NP_220901.1 4.759331 RECJ (recJ) 47466 G06 RP563 hypothetical protein RP563 1801 NP_220935.1 1.024431 47414 G07 RP565 penicillin-binding protein (pbpA1) 1819 NP_220937.1 3.71138 succinate dehydrogenase 47307 G08 RP128 1825 NP_220520.1 4.424658 flavoprotein subunit 47262 G09 RP145 aspartyl-tRNA synthetase 1852 NP_220536.1 4.043197 ribonucleotide-diphosphate reductase 47387 G10 RP513 1858 NP_220889.1 4.370829 subunit alpha multidrug resistance transporter 47299 G11 RP205 1864 NP_220593.1 4.348712 ATM1 47458 G12 RP859 DNA primase 1885 NP_221207.1 3.341645 47362 H01 RP017 hypothetical protein RP017 1918 NP_220412.1 3.567779 47268 H02 RP185 molecular chaperone DnaK 1918 NP_220574.1 4.205422 47294 H03 RP858 RNA polymerase sigma factor RpoD 1942 NP_221206.1 4.378991 47343 H04 RP043 cell division protein FTSH (ftsH) 1948 NP_220437.1 4.300308 47258 H05 RP540 primosome assembly protein PriA 1981 NP_220913.1 4.199394 47350 H06 RP849 glycyl-tRNA synthetase subunit beta 1981 CAA15273.1 3.53054 putative soluble lytic murein 47411 H07 RP400 1990 NP_220781.1 4.224121 transglycosylase precursor (slt) 47279 H08 RP792 NADH dehydrogenase subunit L 1996 NP_221142.1 4.242986 47402 H09 RP691 hypothetical protein RP691 2005 NP_221052.1 4.05187 47499 H10 RP203 excinuclease ABC subunit B 2023 NP_220591.1 4.054375 propionyl-COA carboxylase alpha 47290 H11 RP618 2032 NP_220985.1 4.068898 chain precursor (pccA) 47338 H12 RP105 hypothetical protein RP105 2053 NP_220497.1 4.953726

Table 9: Rickettsia prowazekii Gateway® Clone, Plate 9 (ZRPAI), NR-194571 Clone Well Locus ID Description ORF Length Accession Average Position Number Depth of Coverage 47519 A01 RP797 NADH dehydrogenase subunit G 2062 NP_221147.1 4.872454 47383 A02 RP256 ribonuclease E (rne) 2086 NP_220641.1 4.674017 47514 A03 RP281 protease II 2089 NP_220665.1 4.154619 47370 A04 RP720 NAD-dependent DNA ligase LigA 2104 NP_221075.1 4.826046 47326 A05 RP006 hypothetical protein RP006 2155 NP_220402.1 2.970302 47282 A06 RP674 hypothetical protein RP674 2170 NP_221035.1 4.869124 47360 A07 RP560 3-hydroxyacyl-CoA dehydrogenase 2197 NP_220931.1 4.133364 ATP-dependent DNA helicase RECG 47406 A08 RP593 2209 NP_220962.1 4.765505 (recG) cell division protein FTSK homolog 47492 A09 RP823 2269 NP_221172.1 4.144116 (ftsK)

BEI Resources E-mail: [email protected] www.beiresources.org Tel: 800-359-7370 Fax: 703-365-2898

© 2014 American Type Culture Collection (ATCC). All rights reserved. NR-19276_16JUN2014 Page 19 of 20

Master Clone List for NR-19276

Clone Well Locus ID Description ORF Length Accession Average Position Number Depth of Coverage polynucleotide 47333 A10 RP504 2272 NP_220880.1 4.62456 phosphorylase/polyadenylase outer membrane protein OMP1 47494 A11 RP160 2341 NP_220550.1 4.449381 (omp1) 47420 A12 RP326 DNA topoisomerase I 2365 NP_220709.1 4.314588 type IV secretion system ATPase 47319 B01 RP103 2452 NP_220495.1 4.316069 VirB4 47473 B02 RP580 DNA gyrase subunit B 2458 NP_220951.1 3.648495 47435 B03 RP687 valyl-tRNA synthetase 2479 NP_221048.1 4.149657 phenylalanyl-tRNA synthetase 47513 B04 RP418 2482 NP_220799.1 3.870266 subunit beta 47447 B05 RP421 leucyl-tRNA synthetase 2521 NP_220802.1 3.992067 outer membrane assembly protein 47503 B06 RP347 2542 NP_220730.1 4.708891 (asmA) 47431 B07 RP780 UDP-glucose 6-dehydrogenase (Udg) 2542 NP_221130.1 4.833596 47440 B08 RP776 DNA polymerase I 2638 NP_221127.1 4.589841 47334 B09 RP349 hypothetical protein RP349 2641 NP_220732.1 4.184021 47354 B10 RP799 aconitate hydratase 2671 NP_221149.1 4.107076 47463 B11 RP298 DNA mismatch repair protein MutS 2710 NP_220682.1 4.497048 47399 B12 RP206 DNA gyrase subunit A 2752 NP_220594.1 4.478198 synthesis 47346 C01 RP465 2800 NP_220845.1 4.600357 sensor protein PhoR 2-oxoglutarate dehydrogenase E1 47311 C02 RP180 2845 NP_220570.1 3.786292 component 47367 C03 RP106 hypothetical protein RP106 2950 NP_220498.1 4.27322 47390 C04 RP170 acriflavin resistance protein D 3061 NP_220560.1 4.511598 47289 C05 RP598 transcription-repair coupling factor 3397 NP_220966.1 4.288195 47275 C06 RP108 hypothetical protein RP108 3502 NP_220500.1 4.163621 47451 C07 RP785 VIRB4 protein precursor (virB4) 3544 NP_221135.1 4.947799 47474 C08 RP704 cell surface antigen (sca5) 4966 NP_221064.1 3.867902 1All information in this table was provided by J. Craig Venter Institute at the time of deposition

ATCC® is a trademark of the American Type Culture Collection.

BEI Resources E-mail: [email protected] www.beiresources.org Tel: 800-359-7370 Fax: 703-365-2898

© 2014 American Type Culture Collection (ATCC). All rights reserved. NR-19276_16JUN2014 Page 20 of 20