Morphological Evidence Supporting the Common Lineage Between Crustacea and Hexapoda Dom Apicella, Aaron Codling, Robert Keller, Steve Koppleman
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Going Deeper Into High and Low Phylogenetic Relationships of Protura
G C A T T A C G G C A T genes Article Going Deeper into High and Low Phylogenetic Relationships of Protura 1, , 2,3, 3 1 1 Antonio Carapelli * y , Yun Bu y, Wan-Jun Chen , Francesco Nardi , Chiara Leo , Francesco Frati 1 and Yun-Xia Luan 3,4,* 1 Department of Life Sciences, University of Siena, Via A. Moro 2, 53100 Siena, Italy; [email protected] (F.N.); [email protected] (C.L.); [email protected] (F.F.) 2 Natural History Research Center, Shanghai Natural History Museum, Shanghai Science & Technology Museum, Shanghai 200041, China; [email protected] 3 Key Laboratory of Insect Developmental and Evolutionary Biology, Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai 200032, China; [email protected] 4 Guangdong Provincial Key Laboratory of Insect Developmental Biology and Applied Technology, Institute of Insect Science and Technology, School of Life Sciences, South China Normal University, Guangzhou 510631, China * Correspondence: [email protected] (A.C.); [email protected] (Y.-X.L.); Tel.: +39-0577-234410 (A.C.); +86-18918100826 (Y.-X.L.) These authors contributed equally to this work. y Received: 16 March 2019; Accepted: 5 April 2019; Published: 10 April 2019 Abstract: Proturans are small, wingless, soil-dwelling arthropods, generally associated with the early diversification of Hexapoda. Their bizarre morphology, together with conflicting results of molecular studies, has nevertheless made their classification ambiguous. Furthermore, their limited dispersal capability (due to the primarily absence of wings) and their euedaphic lifestyle have greatly complicated species-level identification. -
Phylogenomic Resolution of Sea Spider Diversification Through Integration Of
bioRxiv preprint doi: https://doi.org/10.1101/2020.01.31.929612; this version posted February 2, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. Phylogenomic resolution of sea spider diversification through integration of multiple data classes 1Jesús A. Ballesteros†, 1Emily V.W. Setton†, 1Carlos E. Santibáñez López†, 2Claudia P. Arango, 3Georg Brenneis, 4Saskia Brix, 5Esperanza Cano-Sánchez, 6Merai Dandouch, 6Geoffrey F. Dilly, 7Marc P. Eleaume, 1Guilherme Gainett, 8Cyril Gallut, 6Sean McAtee, 6Lauren McIntyre, 9Amy L. Moran, 6Randy Moran, 5Pablo J. López-González, 10Gerhard Scholtz, 6Clay Williamson, 11H. Arthur Woods, 12Ward C. Wheeler, 1Prashant P. Sharma* 1 Department of Integrative Biology, University of Wisconsin–Madison, Madison, WI, USA 2 Queensland Museum, Biodiversity Program, Brisbane, Australia 3 Zoologisches Institut und Museum, Cytologie und Evolutionsbiologie, Universität Greifswald, Greifswald, Germany 4 Senckenberg am Meer, German Centre for Marine Biodiversity Research (DZMB), c/o Biocenter Grindel (CeNak), Martin-Luther-King-Platz 3, Hamburg, Germany 5 Biodiversidad y Ecología Acuática, Departamento de Zoología, Facultad de Biología, Universidad de Sevilla, Sevilla, Spain 6 Department of Biology, California State University-Channel Islands, Camarillo, CA, USA 7 Départment Milieux et Peuplements Aquatiques, Muséum national d’Histoire naturelle, Paris, France 8 Institut de Systématique, Emvolution, Biodiversité (ISYEB), Sorbonne Université, CNRS, Concarneau, France 9 Department of Biology, University of Hawai’i at Mānoa, Honolulu, HI, USA Page 1 of 31 bioRxiv preprint doi: https://doi.org/10.1101/2020.01.31.929612; this version posted February 2, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. -
Animal Phylum Poster Porifera
Phylum PORIFERA CNIDARIA PLATYHELMINTHES ANNELIDA MOLLUSCA ECHINODERMATA ARTHROPODA CHORDATA Hexactinellida -- glass (siliceous) Anthozoa -- corals and sea Turbellaria -- free-living or symbiotic Polychaetes -- segmented Gastopods -- snails and slugs Asteroidea -- starfish Trilobitomorpha -- tribolites (extinct) Urochordata -- tunicates Groups sponges anemones flatworms (Dugusia) bristleworms Bivalves -- clams, scallops, mussels Echinoidea -- sea urchins, sand Chelicerata Cephalochordata -- lancelets (organisms studied in detail in Demospongia -- spongin or Hydrazoa -- hydras, some corals Trematoda -- flukes (parasitic) Oligochaetes -- earthworms (Lumbricus) Cephalopods -- squid, octopus, dollars Arachnida -- spiders, scorpions Mixini -- hagfish siliceous sponges Xiphosura -- horseshoe crabs Bio1AL are underlined) Cubozoa -- box jellyfish, sea wasps Cestoda -- tapeworms (parasitic) Hirudinea -- leeches nautilus Holothuroidea -- sea cucumbers Petromyzontida -- lamprey Mandibulata Calcarea -- calcareous sponges Scyphozoa -- jellyfish, sea nettles Monogenea -- parasitic flatworms Polyplacophora -- chitons Ophiuroidea -- brittle stars Chondrichtyes -- sharks, skates Crustacea -- crustaceans (shrimp, crayfish Scleropongiae -- coralline or Crinoidea -- sea lily, feather stars Actinipterygia -- ray-finned fish tropical reef sponges Hexapoda -- insects (cockroach, fruit fly) Sarcopterygia -- lobed-finned fish Myriapoda Amphibia (frog, newt) Chilopoda -- centipedes Diplopoda -- millipedes Reptilia (snake, turtle) Aves (chicken, hummingbird) Mammalia -
1 Biology 205: Partial Classification Of
[Leander – University of British Columbia] BIOLOGY 205: PARTIAL CLASSIFICATION OF INVERTEBRATES You are responsible for knowing the following taxa in bold font (Ranks are arbitrary & listed for pedagogical purposes) --------------------------------------------------------------------------------------------------------------------------------------- Domain Eukaryota 1. Subdomain Excavata (Giardia, trichomonads, trypanosomatids, euglenids etc.) 2. Subdomain Rhizaria (forams, radiolarians, cercomonads, chlorarchniophytes etc.) 3. Subdomain Chromalveolata (brown algae, diatoms, ciliates, dinoflagellates etc.) 4. Subdomain Plantae (red algae, green algae, land plants etc.) 5. Subdomain Opisthokonta (animals, fungi, slime molds etc.) Superkingdom Amoebozoa (dictyostelids, myxomycetes, lobose amoebae etc.) Superkingdom Fungi (chytrids, mushrooms, yeasts etc.) Superkingdom Choanozoa Kingdom Choanoflagellata (choanoflagellates) ‘invertebrates’ ------------------------------------------------------------------------------------------------------------------- ⇓ Kingdom Animalia (= Metazoa) Phylum Porifera (sponges) Class Calcarea (calcareous sponges) Class Hexactinellida (glass sponges) Class Demospongiae (demosponges) Phylum Placozoa (Trichoplax) Eumetazoa ----------------------------------------------------------------------------------------------------------------------- ⇓ Phylum Cnidaria (cnidarians) Class Hydrozoa (hydroids & hydromedusae) Class Anthozoa (anemones, corals & sea pens) Class Scyphozoa (‘true’ sea jellies) Phylum Myxozoa Phylum -
(Includes Insects) Myriapods Pycnogonids Limulids Arachnids
N. Dean Pentcheff Insect Friends and Relations Regina Wetzer What do we know How do we know that? about arthropod relationships? Examples of lines of evidence: Onychophorans Genetics and Genomics Genomic approaches The figures at left show the can look at patterns protein structure of opsins Common of occurrence of (visual pigments). Yellow iden- tifies areas of the protein that Ancestor of whole genes across Crustaceans (includes Insects) have important evolutionary Panarthropoda taxa to identify pat- terns of common and functional differences. This ancestry. provides information about how the opsin gene family has Cook, C. E., Smith, M. L., evolved across different taxa. Telford, M. J., Bastianello, Myriapods A., Akam, M. 2001. Hox Porter, M. L., Cronin, T. W., McClellan, Panarthropoda genes and the phylogeny D. A., Crandall, K. A. 2007. Molecular of the arthropods. Cur- characterization of crustacean visual rent Biology 11: 759-763. pigments and the evolution of pan- crustacean opsins. Molecular Biology This phylogenetic tree of the Arthropoda and Evolution 24(1): 253-268. Arthropoda Pycnogonids outlines our best current knowledge about relationships in the group. Dunn, C.W. et al. 2008. Broad phylogenetic sampling improves resolution of the animal tree of life. Nature Morphology 452: 745-749. Limulids Comparing similarities and differences among arthropod appendages is a fertile source of infor- Chelicerata mation about patterns of ancestry. Morphological Arachnids evidence can be espec- ially valuable because it is available for both living Unraveling arthropod phylogeny and fossil taxa. There are about 1,100,000 described arthropods – 85% of multicellular animals! Segmentation, jointed appendages, and the devel- opment of pattern-forming genes profoundly affected arthropod evolution and created the most morphologically diverse taxon on [Left:] Cotton, T. -
Introduction to Arthropoda
1 1 2 Introduction to Arthropoda The arthropods are the most successful phylum of animals, both in diversity of distribution and in numbers of species and individuals. They have adapted successfully to life in water, on land and in the air. About 80% of all known animal species belong to the Arthropoda - about 800,000 species have been described, and recent estimates put the total number of species in the phylum at about 6 million. Evolution : • Probably evolved from a Peripatus - like ancestor, which in turn evolved from a segmented worm Metamerism • Metamerism- body is segmented. Exoskeleton and metamerism causes molting Exoskeleto • Exoskeleton- body covered with a hard external skeleton • Why an exoskeleton? • Why not bones? Exoskeleton good for small things, protects body from damage (rainfall, falling, etc.). • Bones better for large things Bilateral Symmetry : • Bilateral Symmetry- body can be divided into two identical halves Jointed Appendages : • Jointed Appendages- each segment may have one pair of appendages, such as: • legs , wings , mouthparts Open Circulatory System : • Open Circulatory System- blood washes over organs and is not entirely closed by blood vessels. Our system is a closed one Ventral Nerve Cord : • one nerve cord, similar to our spinal column • 2 3 Open Circulatory System Closed Circulatory System Classification : 1-Subphylum Trilobitomorpha 2-Subphylum Cheliceriformes Class Chelicerata Subclass Merostomata (horseshoe crabs) 3- Subclass Arachnida (spiders, scorpions, mites, ticks) Class Pycnogonida (sea -
New Records of Springtail Fauna (Hexapoda: Collembola: Entomobryomorpha) from Ordu Province in Turkey
Turkish Journal of Zoology Turk J Zool (2017) 41: 24-32 http://journals.tubitak.gov.tr/zoology/ © TÜBİTAK Research Article doi:10.3906/zoo-1509-28 New records of springtail fauna (Hexapoda: Collembola: Entomobryomorpha) from Ordu Province in Turkey 1 2, 3 Muhammet Ali ÖZATA , Hasan SEVGİLİ *, Igor J. KAPRUS 1 Demir Karamancı Anatolian High School, Melikgazi, Kayseri, Turkey 2 Department of Biology, Faculty of Arts and Sciences, Ordu University, Ordu, Turkey 3 State Museum of Natural History, Ukrainian National Academy of Sciences, L’viv, Ukraine Received: 14.09.2015 Accepted/Published Online: 27.04.2016 Final Version: 25.01.2017 Abstract: This study aims to elucidate the Collembola fauna of the province of Ordu, which is situated between the Middle and Eastern Black Sea regions of Turkey. Although a large number of Collembolan specimens had been collected, only Entomobryomorpha species were given emphasis. From 44 different sampled localities of the province of Ordu, we recorded 6 families, 14 genera, and 28 species. Six of these species were previously recorded and 20 of them are new records for Turkey. The results were not surprising, considering that the sampled region had not been studied previously, quite like many habitats in Turkey. With our 20 new records (Entomobryomorpha), the grand total of the springtail fauna of Turkey is increased to 73 species. This represents an increase of almost 40% of the current list of known species. These numbers show us that the diversity of Collembola in Turkey is not thoroughly known and it is clear that numerous species remain undiscovered or undescribed. -
Saproxylic Collembola in Forests of Northern Hemisphere
The hidden and unknown biodiversity of dead wood: Saproxylic Collembola in forests of Northern hemisphere dr Adrian Smolis Wrocław Uniwersity Poland Springtails (Collembola) – systematic position • Phyllum: Arthropoda Latreille, 1829 • Subphyllum: two concepts – Pancrustacea Zrzavy & Stys, 1997 (hexapods and crustaceans) Atelocerata Heymons, 1901 (hexapods and myriapods) • Superclass: Hexapoda Blainville, 1816 (Insecta sensu lato) • „Apterygota” • „Entognatha” – Collembola, Protura and Diplura Class: Collembola Lubbock, 1870 Rhyniella praecursor (the early Devon ca 400 milion years ago, the first and oldest hexapods, terrestial arthropods or animal?) Springtails – morphology • Body size: 0.12-17 mm; body shape: elongate, cylindrical, flattened or globular; colour:uniformly pigmented, bluish or white. • three tagmae: head (antennae and eyes), thorax (legs) and abdomen (6 segments). • Unique structures: postanntennal organ, ventral tube and jumping organ. Springtails – morphology Springtails – morphology Springtails – ecology • direct development • food (polyphagous): fungal hyphae, decaying vegetation, organic detriturus, algae, lichens, micro-organisms, some genera and species carnivorous. • very widespread and abundant group, almost all habitats, huge aggregates on snow (common name „snow fleas”). • life-forms: atmobionts, hemiedaphons and euedaphons. • important roles in nutrient recycling, initial stages of decomposition, structure of soils, growth of mycorhizae, food of many predators. • ca 8000 species and 600 genera described. Springtails -
Ecdysozoan Phylogeny and Bayesian Inference: First Use of Nearly Complete 28S and 18S Rrna Gene Sequences to Classify the Arthro
MOLECULAR PHYLOGENETICS AND EVOLUTION Molecular Phylogenetics and Evolution 31 (2004) 178–191 www.elsevier.com/locate/ympev Ecdysozoan phylogeny and Bayesian inference: first use of nearly complete 28S and 18S rRNA gene sequences to classify the arthropods and their kinq Jon M. Mallatt,a,* James R. Garey,b and Jeffrey W. Shultzc a School of Biological Sciences, Washington State University, Pullman, WA 99164-4236, USA b Department of Biology, University of South Florida, 4202 East Fowler Ave. SCA110, Tampa, FL 33620, USA c Department of Entomology, University of Maryland, College Park, MD 20742, USA Received 4 March 2003; revised 18 July 2003 Abstract Relationships among the ecdysozoans, or molting animals, have been difficult to resolve. Here, we use nearly complete 28S + 18S ribosomal RNA gene sequences to estimate the relations of 35 ecdysozoan taxa, including newly obtained 28S sequences from 25 of these. The tree-building algorithms were likelihood-based Bayesian inference and minimum-evolution analysis of LogDet-trans- formed distances, and hypotheses were tested wth parametric bootstrapping. Better taxonomic resolution and recovery of estab- lished taxa were obtained here, especially with Bayesian inference, than in previous parsimony-based studies that used 18S rRNA sequences (or 18S plus small parts of 28S). In our gene trees, priapulan worms represent the basal ecdysozoans, followed by ne- matomorphs, or nematomorphs plus nematodes, followed by Panarthropoda. Panarthropoda was monophyletic with high support, although the relationships among its three phyla (arthropods, onychophorans, tardigrades) remain uncertain. The four groups of arthropods—hexapods (insects and related forms), crustaceans, chelicerates (spiders, scorpions, horseshoe crabs), and myriapods (centipedes, millipedes, and relatives)—formed two well-supported clades: Hexapoda in a paraphyletic crustacea (Pancrustacea), and ÔChelicerata + MyriapodaÕ (a clade that we name ÔParadoxopodaÕ). -
Phylum Porifera
790 Chapter 28 | Invertebrates updated as new information is collected about the organisms of each phylum. 28.1 | Phylum Porifera By the end of this section, you will be able to do the following: • Describe the organizational features of the simplest multicellular organisms • Explain the various body forms and bodily functions of sponges As we have seen, the vast majority of invertebrate animals do not possess a defined bony vertebral endoskeleton, or a bony cranium. However, one of the most ancestral groups of deuterostome invertebrates, the Echinodermata, do produce tiny skeletal “bones” called ossicles that make up a true endoskeleton, or internal skeleton, covered by an epidermis. We will start our investigation with the simplest of all the invertebrates—animals sometimes classified within the clade Parazoa (“beside the animals”). This clade currently includes only the phylum Placozoa (containing a single species, Trichoplax adhaerens), and the phylum Porifera, containing the more familiar sponges (Figure 28.2). The split between the Parazoa and the Eumetazoa (all animal clades above Parazoa) likely took place over a billion years ago. We should reiterate here that the Porifera do not possess “true” tissues that are embryologically homologous to those of all other derived animal groups such as the insects and mammals. This is because they do not create a true gastrula during embryogenesis, and as a result do not produce a true endoderm or ectoderm. But even though they are not considered to have true tissues, they do have specialized cells that perform specific functions like tissues (for example, the external “pinacoderm” of a sponge acts like our epidermis). -
On Homology of Arthropod Compound Eyes' "The Eye" Has Long Served As
INTEGR. CotoP. BIOL., 43:522-530 (2003) On Homology of Arthropod Compound Eyes' TODD H. OAKLEY 2 Ecology Evolutioni and Marine Biology, University of California-SantaBarbara, S'anzta Barbara, Califonzia 93106 SyNopsis. Eyes serve as models to understand the evolution of complex traits, with broad implications for the origins of evolutionary novelty. Discussions of eye evolution are relevant at miany taxonomic levels, especially within arthropods where compound eye distribution is perplexing. Either compound eyes were lost numerous times or very similar eyes evolved separately in multiple lineages. Arthropod compound eye homology is possible, especially; between crustaceans and hexapods, which have very similar eye facets and may be sister taxa. However, judging homology only on similarity requires subjective decisions. Regardless of whether compound eyes were present in a common ancestor of arthropods or crustaceans + hexapods, recent phylogenetic evidence suggests that the compound eyes, today present in myodocopid ostracods (Crus- tacea), may have been absent in ostracod ancestors. This pattern is inconsistent with phylogenetic homology. Multiple losses of ostracod eyes are an alternative hypothesis that is statistically improbable and without clear cause. One possible evolutionary process to explain the lack of phylogenetic'homology of ostracod compound eyes is that eyes may evolve by switchback evolution, where genes for lost structures remain dormant and are re-expressed much later in evolution. INTRODUCTION 'the recent evidence for and implications of a poten- "The eye" has long served as a canonical example tially non-homologous arthropod compound eye, un- of a complex trait. In an early design-based argument derstanding the case for compound eye homology is for the existence of God, Paley (1846) used the eye as important. -
Arthropod Fossil Data Increase Congruence of Morphological and Molecular Phylogenies
ARTICLE Received 14 Jan 2013 | Accepted 21 Aug 2013 | Published 30 Sep 2013 DOI: 10.1038/ncomms3485 Arthropod fossil data increase congruence of morphological and molecular phylogenies David A. Legg1,2,3, Mark D. Sutton1 & Gregory D. Edgecombe2 The relationships of major arthropod clades have long been contentious, but refinements in molecular phylogenetics underpin an emerging consensus. Nevertheless, molecular phylogenies have recovered topologies that morphological phylogenies have not, including the placement of hexapods within a paraphyletic Crustacea, and an alliance between myriapods and chelicerates. Here we show enhanced congruence between molecular and morphological phylogenies based on 753 morphological characters for 309 fossil and Recent panarthropods. We resolve hexapods within Crustacea, with remipedes as their closest extant relatives, and show that the traditionally close relationship between myriapods and hexapods is an artefact of convergent character acquisition during terrestrialisation. The inclusion of fossil morphology mitigates long-branch artefacts as exemplified by pycnogonids: when fossils are included, they resolve with euchelicerates rather than as a sister taxon to all other euarthropods. 1 Department of Earth Sciences and Engineering, Royal School of Mines, Imperial College London, London SW7 2AZ, UK. 2 Department of Earth Sciences, The Natural History Museum, London SW7 5BD, UK. 3 Oxford University Museum of Natural History, Oxford OX1 3PW, UK. Correspondence and requests for materials should be addressed to D.A.L. (email: [email protected]). NATURE COMMUNICATIONS | 4:2485 | DOI: 10.1038/ncomms3485 | www.nature.com/naturecommunications 1 & 2013 Macmillan Publishers Limited. All rights reserved. ARTICLE NATURE COMMUNICATIONS | DOI: 10.1038/ncomms3485 rthropods are diverse, disparate, abundant and ubiqui- including all major extinct and extant panarthropod groups.