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Deepseacorals.Pdf
Protection of Deep-Sea Corals from Physical Damage by Fishing Gear under the MSA Deep Sea Coral Discretionary Authority Purpose The National Oceanic and Atmospheric Administration (NOAA) is a steward of the nation’s living marine resources. This document will assist NOAA offices and the regional fishery management councils (Councils)1 when developing protective measures for deep-sea corals under section 303(b)(2)(B) of the Magnuson-Stevens Fishery Conservation and Management Act (MSA).2 Section 303(b)(2) provides that any fishery management plan (FMP) which is prepared by any Council or the Secretary, with respect to any fishery, may: A) designate zones where, and periods when, fishing shall be limited, or shall not be permitted, or shall be permitted only by specified types of fishing vessels or with specified types and quantities of fishing gear; B) designate such zones in areas where deep sea corals are identified under section 408 [the Deep Sea Coral Research and Technology Program], to protect deep sea corals from physical damage from fishing gear or to prevent loss or damage to such fishing gear from interactions with deep sea corals, after considering long-term sustainable uses of fishery resources in such areas. 16 U.S.C. § 1853(b)(2)(A)-(B). We encourage use of this discretionary authority to advance the agency’s and Councils’ conservation objectives. NOAA’s Strategic Plan for Deep-Sea Coral and Sponge Ecosystems seeks to ensure that fisheries that may interact with known and likely deep-sea coral ecosystems are identified and monitored and that such ecosystems are protected from the impacts of fishing gear (see Figure 1).3 This document is consistent with those policy goals. -
Metabolomic Profiling Reveals Deep Chemical Divergence Between Two
OPEN Metabolomic profiling reveals deep SUBJECT AREAS: chemical divergence between two METABOLOMICS CHEMICAL ECOLOGY morphotypes of the zoanthid BIODIVERSITY MASS SPECTROMETRY Parazoanthus axinellae Nadja Cachet1, Gre´gory Genta-Jouve1,2, Julijana Ivanisevic1,3, Pierre Chevaldonne´3, Fre´de´ric Sinniger4,5, Received Ge´rald Culioli1,6, Thierry Pe´rez3 & Olivier P. Thomas1,3 10 October 2014 Accepted 1Institut de Chimie de Nice - EEIC, UMR 7272 CNRS, Universite´ de Nice-Sophia Antipolis, Parc Valrose, 06108 Nice, France, 8 January 2015 2Laboratoire de Pharmacognosie et de Chimie des Substances Naturelles, UMR CNRS 8638 COMETE, Universite´ Paris Descartes, 4 Avenue de l’Observatoire 75006 Paris, France, 3Institut Me´diterrane´en de Biodiversite´ et d’Ecologie Marine et Continentale, UMR Published 7263 CNRS, IRD, Aix Marseille Universite´, Avignon Universite´, Station Marine d’Endoume, Rue Batterie des Lions, 13007 6 February 2015 Marseille, France, 4Japan Agency for Marine-Earth Science and Technology, 224-3 Aza-Toyohara, Nago City, Okinawa 905- 2172, Japan, 5Tropical Biosphere Reseach Center, University of the Ryukyus, 3422 Sesoko, Motobu, Okinawa 905-0227, Japan, 6MAPIEM, EA 4323 Universite´ de Toulon, 83957 La Garde, France. Correspondence and requests for materials Metabolomics has recently proven its usefulness as complementary tool to traditional morphological and should be addressed to genetic analyses for the classification of marine invertebrates. Among the metabolite-rich cnidarian order T.P. (thierry.perez@ Zoantharia, Parazoanthus is a polyphyletic genus whose systematics and phylogeny remain controversial. imbe.fr) or O.P.T. Within this genus, one of the most studied species, Parazoanthus axinellae is prominent in rocky shallow (olivier.thomas@unice. waters of the Mediterranean Sea and the NE Atlantic Ocean. -
Halogenated Tyrosine Derivatives from the Tropical Eastern Pacific
Article Cite This: J. Nat. Prod. 2019, 82, 1354−1360 pubs.acs.org/jnp Halogenated Tyrosine Derivatives from the Tropical Eastern Pacific Zoantharians Antipathozoanthus hickmani and Parazoanthus darwini † ‡ † § ‡ ⊥ ∥ Paul O. Guillen, , Karla B. Jaramillo, , Laurence Jennings, Gregorý Genta-Jouve, , # # # † Mercedes de la Cruz, Bastien Cautain, Fernando Reyes, Jenny Rodríguez, ‡ and Olivier P. Thomas*, † ESPOL Escuela Superior Politecnicá del Litoral, ESPOL, Centro Nacional de Acuacultura e Investigaciones Marinas, Campus Gustavo Galindo km. 30.5 vía Perimetral, P.O. Box 09-01-5863, Guayaquil, Ecuador ‡ Marine Biodiscovery, School of Chemistry and Ryan Institute, National University of Ireland Galway (NUI Galway), University Road, H91 TK33 Galway, Ireland § Zoology, School of Natural Sciences and Ryan Institute, National University of Ireland Galway (NUI Galway), University Road, H91 TK33 Galway, Ireland ⊥ ́ Equipe C-TAC, UMR CNRS 8038 CiTCoM, UniversitéParis Descartes, 4 Avenue de l’Observatoire, 75006 Paris, France ∥ UnitéMoleculeś de Communication et Adaptation des Micro-organismes (UMR 7245), Sorbonne Universites,́ Museuḿ National d’Histoire Naturelle, CNRS, Paris, France # Fundacioń MEDINA, Centro de Excelencia en Investigacioń de Medicamentos Innovadores en Andalucía, Avenida del Conocimiento 34, Parque Tecnologicó de Ciencias de la Salud, E-18016, Armilla, Granada, Spain *S Supporting Information ABSTRACT: In the search for bioactive marine natural products from zoantharians of the Tropical Eastern Pacific, four new tyrosine dipeptides, -
CNIDARIA Corals, Medusae, Hydroids, Myxozoans
FOUR Phylum CNIDARIA corals, medusae, hydroids, myxozoans STEPHEN D. CAIRNS, LISA-ANN GERSHWIN, FRED J. BROOK, PHILIP PUGH, ELLIOT W. Dawson, OscaR OcaÑA V., WILLEM VERvooRT, GARY WILLIAMS, JEANETTE E. Watson, DENNIS M. OPREsko, PETER SCHUCHERT, P. MICHAEL HINE, DENNIS P. GORDON, HAMISH J. CAMPBELL, ANTHONY J. WRIGHT, JUAN A. SÁNCHEZ, DAPHNE G. FAUTIN his ancient phylum of mostly marine organisms is best known for its contribution to geomorphological features, forming thousands of square Tkilometres of coral reefs in warm tropical waters. Their fossil remains contribute to some limestones. Cnidarians are also significant components of the plankton, where large medusae – popularly called jellyfish – and colonial forms like Portuguese man-of-war and stringy siphonophores prey on other organisms including small fish. Some of these species are justly feared by humans for their stings, which in some cases can be fatal. Certainly, most New Zealanders will have encountered cnidarians when rambling along beaches and fossicking in rock pools where sea anemones and diminutive bushy hydroids abound. In New Zealand’s fiords and in deeper water on seamounts, black corals and branching gorgonians can form veritable trees five metres high or more. In contrast, inland inhabitants of continental landmasses who have never, or rarely, seen an ocean or visited a seashore can hardly be impressed with the Cnidaria as a phylum – freshwater cnidarians are relatively few, restricted to tiny hydras, the branching hydroid Cordylophora, and rare medusae. Worldwide, there are about 10,000 described species, with perhaps half as many again undescribed. All cnidarians have nettle cells known as nematocysts (or cnidae – from the Greek, knide, a nettle), extraordinarily complex structures that are effectively invaginated coiled tubes within a cell. -
Three New Species and the Molecular Phylogeny of Antipathozoanthus
A peer-reviewed open-access journal ZooKeys 725: 97–122Three (2017) new species and the molecular phylogeny ofAntipathozoanthus ... 97 doi: 10.3897/zookeys.725.21006 RESEARCH ARTICLE http://zookeys.pensoft.net Launched to accelerate biodiversity research Three new species and the molecular phylogeny of Antipathozoanthus from the Indo-Pacific Ocean (Anthozoa, Hexacorallia, Zoantharia) Hiroki Kise1,2, Takuma Fujii1,3, Giovanni Diego Masucci1, Piera Biondi1, James Davis Reimer1,2,4 1 Molecular Invertebrate Systematics and Ecology Laboratory, Graduate School of Engineering and Science, University of the Ryukyus, 1 Senbaru, Nishihara, Okinawa 903-0213, Japan 2 Palau International Coral Reef Center, 1-M-Dock Road, Koror, Palau 96940 3 Research Center for Island Studies Amami Station, Kagoshima University, Naze-Yanagimachi 2-1, Amami, Kagoshima 894-0032, Japan 4 Tropical Biosphere Research Cen- ter, University of the Ryukyus, 1 Senbaru, Nishihara, Okinawa 903-0213, Japan Corresponding author: Hiroki Kise ([email protected]) Academic editor: B.W. Hoeksema | Received 15 September 2017 | Accepted 7 November 2017 | Published 29 December 2017 http://zoobank.org/E47535C1-21CF-417C-A212-F6E819080565 Citation: Kise H, Fujii T, Masucci GD, Biondi P, Reimer JD (2017) Three new species and the molecular phylogeny of Antipathozoanthus from the Indo-Pacific Ocean (Anthozoa, Hexacorallia, Zoantharia). ZooKeys 725: 97–122.https:// doi.org/10.3897/zookeys.725.21006 Abstract In this study, three new species of macrocnemic zoantharians (Hexacorallia, Zoantharia) are described from localities in the Indo-Pacific Ocean including the Red Sea, the Maldives, Palau, and southern Ja- pan: Antipathozoanthus obscurus sp. n., A. remengesaui sp. n., and A. cavernus sp. -
Strong Linkages Between Depth, Longevity and Demographic Stability Across Marine Sessile Species
Departament de Biologia Evolutiva, Ecologia i Ciències Ambientals Doctorat en Ecologia, Ciències Ambientals i Fisiologia Vegetal Resilience of Long-lived Mediterranean Gorgonians in a Changing World: Insights from Life History Theory and Quantitative Ecology Memòria presentada per Ignasi Montero Serra per optar al Grau de Doctor per la Universitat de Barcelona Ignasi Montero Serra Departament de Biologia Evolutiva, Ecologia i Ciències Ambientals Universitat de Barcelona Maig de 2018 Adivsor: Adivsor: Dra. Cristina Linares Prats Dr. Joaquim Garrabou Universitat de Barcelona Institut de Ciències del Mar (ICM -CSIC) A todas las que sueñan con un mundo mejor. A Latinoamérica. A Asun y Carlos. AGRADECIMIENTOS Echando la vista a atrás reconozco que, pese al estrés del día a día, este ha sido un largo camino de aprendizaje plagado de momentos buenos y alegrías. También ha habido momentos más difíciles, en los cuáles te enfrentas de cara a tus propias limitaciones, pero que te empujan a desarrollar nuevas capacidades y crecer. Cierro esta etapa agradeciendo a toda la gente que la ha hecho posible, a las oportunidades recibidas, a las enseñanzas de l@s grandes científic@s que me han hecho vibrar en este mundo, al apoyo en los momentos más complicados, a las que me alegraron el día a día, a las que hacen que crea más en mí mismo y, sobre todo, a la gente buena que lucha para hacer de este mundo un lugar mejor y más justo. A tod@s os digo gracias! GRACIAS! GRÀCIES! THANKS! Advisors’ report Dra. Cristina Linares, professor at Departament de Biologia Evolutiva, Ecologia i Ciències Ambientals (Universitat de Barcelona), and Dr. -
(Cnidaria, Hexacorallia) from the Galápagos Islands
A peer-reviewed open-access journal ZooKeys 42: 1–36Four (2010) new species and one new genus of zoanthids (Cnidaria, Hexacorallia) from... 1 doi: 10.3897/zookeys.42.378 RESEARCH ARTICLE www.pensoftonline.net/zookeys Launched to accelerate biodiversity research Four new species and one new genus of zoanthids (Cnidaria, Hexacorallia) from the Galápagos Islands James Davis Reimer1,2,†, Takuma Fujii3,‡ 1 Molecular Invertebrate Systematics and Ecology Laboratory, Rising Star Program, Trans-disciplinary Organi- zation for Subtropical Island Studies, University of the Ryukyus, 1 Senbaru, Nishihara, Okinawa 903-0213, Ja- pan 2 Marine Biodiversity Research Program, Institute of Biogeosciences, Japan Agency for Marine-Earth Science and Technology (JAMSTEC), 2-15 Natsushima, Yokosuka, Kanagawa 237-0061, Japan 3 Graduate School of Engineering and Science, University of the Ryukyus, 1 Senbaru, Nishihara, Okinawa 903-0213, Japan † urn:lsid:zoobank.org:author:3CD21222-ADA1-4A28-BE8B-7F9A9DEBA0F2 ‡ urn:lsid:zoobank.org:author:5A117804-991D-4F75-889B-7B1844BF4A99 Corresponding author: James Davis Reimer ( [email protected]) Academic editor: Bert W. Hoeksema | Received 31 December 2009 | Accepted 15 March 2010 | Published 1 April 2010 urn:lsid:zoobank.org:pub:7E58A32B-DF8A-4795-B0D6-C37CB3B89A0E Citation: Reimer JD, Fujii T (2010) Four new species and one new genus of zoanthids (Cnidaria, Hexacorallia) from the Galápagos Islands. ZooKeys 42: 1–36. doi: 10.3897/zookeys.42.378 Abstract Recent research has confi rmed the presence of several species of undescribed macrocnemic zoanthids (Cnidaria: Hexacorallia: Zoantharia: Macrocnemina) in the Galápagos. In this study four new species, including two belonging to a new genus, are described. -
Zoanthids of the Cape Verde Islands and Their Symbionts: Previously Unexamined Diversity in the Northeastern Atlantic
Contributions to Zoology, 79 (4) 147-163 (2010) Zoanthids of the Cape Verde Islands and their symbionts: previously unexamined diversity in the Northeastern Atlantic James D. Reimer1, 2, 4, Mamiko Hirose1, Peter Wirtz3 1 Molecular Invertebrate Systematics and Ecology Laboratory, Rising Star Program, Transdisciplinary Research Organization for Subtropical Island Studies (TRO-SIS), University of the Ryukyus, Senbaru 1, Nishihara, Okinawa 903-0213, Japan 2 Marine Biodiversity Research Program, Institute of Biogeosciences, Japan Agency for Marine-Earth Science and Technology (JAMSTEC), 2-15 Natsushima, Yokosuka, Kanagawa 237-0061, Japan 3 Centro de Ciências do Mar, Universidade do Algarve, Campus de Gambelas, PT 8005-139 Faro, Portugal 4 E-mail: [email protected] Key words: Cape Verde Islands, Cnidaria, Symbiodinium, undescribed species, zoanthid Abstract Symbiodinium ITS-rDNA ..................................................... 155 Discussion ...................................................................................... 155 The marine invertebrate fauna of the Cape Verde Islands con- Suborder Brachycnemina .................................................... 155 tains many endemic species due to their isolated location in the Suborder Macrocnemina ...................................................... 157 eastern Atlantic, yet research has not been conducted on most Conclusions ............................................................................. 158 taxa here. One such group are the zoanthids or mat anemones, Acknowledgements -
Microfilms International 300 N
INFORMATION TO USERS This was produced from a copy of a document sent to us for microfilming, While the most advanced technological means to photograph and reproduce this document have been used, the quality is heavily dependent upon the quality of the material submitted. The following explanation of techniques is provided to help you understand markings or notations which may appear on this reproduction. 1. The sign or "target" for pages apparently lacking from the document photographed is "Missing Page(s)". Ifit was possible to obtain the missing page(s) or section, they are spliced into the film along with adjacent pages. This may have necessitated cutting through an image and duplicating adjacent pages to assure you of complete continuity. 2. When an image on the film is obliterated with a round black mark it is an indication that the film inspector noticed either blurred copy because of movement during exposure, or duplicate copy. Unless we meant to delete copyrighted materials that should not have been filmed, you will find a good image of the page in the adjacent frame. 3. When a map, drawing or chart, etc., is part of the material being photo graphed the photographer has followed a definite method in "sectioning" the material. Itis customary to begin filming at the upper left hand comer of a large sheet and to continue from left to right in equal sections with small overlaps. If necessary, sectioning is continued again-beginning below the first row and continuing on until complete. 4. For any illustrations that cannot be reproduced satisfactorily by xerography, photographic prints can be purchased at additional cost and tipped into your xerographic copy. -
DNA Barcoding of Marine Metazoa
MA03CH18-Bucklin ARI 9 August 2010 20:58 V I E E W R S Review in Advance first posted online I E on August 18, 2010. (Changes may N C still occur before final publication N online and in print.) A D V A DNA Barcoding of Marine Metazoa Ann Bucklin,1 Dirk Steinke,2 and Leocadio Blanco-Bercial3 1Department of Marine Sciences, University of Connecticut, Groton, Connecticut 06340; email: [email protected] 2Biodiversity Institute of Ontario, University of Guelph, Ontario, N1G 2W1 Canada; email: [email protected] 3Department of Marine Sciences, University of Connecticut, Groton, Connecticut 06340; email: [email protected] Annu. Rev. Mar. Sci. 2011. 3:18.1–18.38 Key Words The Annual Review of Marine Science is online at DNA barcode, marine biodiversity, taxonomy, species identification, marine.annualreviews.org mitochondrial DNA This article’s doi: 10.1146/annurev-marine-120308-080950 Abstract Copyright c 2011 by Annual Reviews. More than 230,000 known species representing 31 metazoan phyla populate All rights reserved the world’s oceans. Perhaps another 1,000,000 or more species remain to 1941-1405/11/0115-0001$20.00 be discovered. There is reason for concern that species extinctions may out- by University of Connecticut on 09/11/10. For personal use only. pace discovery, especially in diverse and endangered marine habitats such as Annu. Rev. Marine. Sci. 2011.3. Downloaded from www.annualreviews.org coral reefs. DNA barcodes (i.e., short DNA sequences for species recogni- tion and discrimination) are useful tools to accelerate species-level analysis of marine biodiversity and to facilitate conservation efforts. -
Assessing the Zoantharian Diversity of the Tropical Eastern Pacific
www.nature.com/scientificreports OPEN Assessing the Zoantharian Diversity of the Tropical Eastern Pacifc through an Integrative Received: 13 December 2017 Accepted: 13 April 2018 Approach Published: xx xx xxxx Karla B. Jaramillo 1,2, Miriam Reverter3, Paul O. Guillen 1,3, Grace McCormack2, Jenny Rodriguez 1, Frédéric Sinniger 4 & Olivier P. Thomas 3 Zoantharians represent a group of marine invertebrates widely distributed from shallow waters to the deep sea. Despite a high diversity and abundance in the rocky reefs of the Pacifc Ocean, very few studies have been reported on the diversity of this group in the Tropical Eastern Pacifc coasts. While molecular techniques recently clarifed some taxonomic relationships within the order, the taxonomy of zoantharians is still highly challenging due to a lack of clear morphological characters and confusing use of diferent data in previous studies. Our frst insight into the zoantharian diversity at El Pelado Marine Protected Area - Ecuador led to the identifcation of six species: Terrazoanthus patagonichus; Terrazoanthus sp.; Antipathozoanthus hickmani; Parazoanthus darwini; Zoanthus cf. pulchellus; and Zoanthus cf. sociatus. A metabolomic approach using UHPLC-HRMS was proven to be very efcient as a complementary tool in the systematics of these species and specialized metabolites of the ecdysteroid and alkaloid families were identifed as key biomarkers for interspecifc discrimination. These results show good promise for an application of this integrative approach to other zoantharians. Te marine biodiversity of the Tropical Eastern Pacifc ecoregion has been poorly studied in comparison to hot- spots of biodiversity like the Central Indo-Pacifc with a notable exception of the Galapagos islands1. -
Evolution of Anthozoan Polyp Retraction Mechanisms: Convergent
Swain et al. BMC Evolutionary Biology (2015) 15:123 DOI 10.1186/s12862-015-0406-1 RESEARCH ARTICLE Open Access Evolution of anthozoan polyp retraction mechanisms: convergent functional morphology and evolutionary allometry of the marginal musculature in order Zoanthidea (Cnidaria: Anthozoa: Hexacorallia) Timothy D. Swain1,2*, Jennifer L. Schellinger3, Anna M. Strimaitis3 and Kim E. Reuter4 Abstract Background: Retraction is among the most important basic behaviors of anthozoan Cnidaria polyps and is achieved through the coordinated contraction of at least six different muscle groups. Across the Anthozoa, these muscles range from unrecognizable atrophies to massive hypertrophies, producing a wide diversity of retraction abilities and functional morphologies. The marginal musculature is often the single largest component of the retraction mechanism and is composed of a diversity of muscular, attachment, and structural features. Although the arrangements of these features have defined the higher taxonomy of Zoanthidea for more than 100 years, a decade of inferring phylogenies from nucleotide sequences has demonstrated fundamental misconceptions of their evolution. Results: Here we expand the diversity of known marginal muscle forms from two to at least ten basic states and reconstruct the evolution of its functional morphology across the most comprehensive molecular phylogeny available. We demonstrate that the evolution of these forms follows a series of transitions that are much more complex than previously hypothesized and converge on similar forms multiple times. Evolution of the marginal musculature and its attachment and support structures are partially scaled according to variation in polyp and muscle size, but also vary through evolutionary allometry. Conclusions: Although the retraction mechanisms are diverse and their evolutionary histories complex, their morphologies are largely reflective of the evolutionary relationships among Zoanthidea higher taxa and may offer a key feature for integrative systematics.