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Di Camillo Et Al 2017
This is a post-peer-review, pre-copyedit version of an article published in Biodiversity and Conservation on 23 December 2017 (First Online). The final authenticated version is available online at: https://doi.org/10.1007/s10531-017-1492-8 https://link.springer.com/article/10.1007%2Fs10531-017-1492-8 An embargo period of 12 months applies to this Journal. This paper has received funding from the European Union (EU)’s H2020 research and innovation programme under the Marie Sklodowska-Curie grant agreement No 643712 to the project Green Bubbles RISE for sustainable diving (Green Bubbles). This paper reflects only the authors’ view. The Research Executive Agency is not responsible for any use that may be made of the information it contains. © 2017. This manuscript version is made available under the CC-BY-NC-ND 4.0 AUTHORS' ACCEPTED MANUSCRIPT Building a baseline for habitat-forming corals by a multi-source approach, including Web Ecological Knowledge - Cristina G Di Camillo, Department of Life and Environmental Sciences, Marche Polytechnic University, CoNISMa, Ancona, Italy, [email protected] - Massimo Ponti, Department of Biological, Geological and Environmental Sciences and Interdepartmental Research Centre for Environmental SciencesUniversity of Bologna, CoNISMa, Ravenna, Italy - Giorgio Bavestrello, Department of Earth, Environment and Life Sciences, University of Genoa, CoNISMa, Genoa, Italy - Maja Krzelj, Department of Marine Studies, University of Split, Split, Croatia - Carlo Cerrano, Department of Life and Environmental Sciences, Marche Polytechnic University, CoNISMa, Ancona, Italy Received: 12 January 2017 Revised: 10 December 2017 Accepted: 14 December 2017 First online: 23 December 2017 Cite as: Di Camillo, C.G., Ponti, M., Bavestrello, G. -
Ecological Mapping and Data Quality Assessment for the Needs of Ecosystem-Based Marine Spatial Management: Case Study Greek Ionian Sea and the Adjacent Gulfs
Research Article Mediterranean Marine Science Indexed in WoS (Web of Science, ISI Thomson) and SCOPUS The journal is available on line at http://www.medit-mar-sc.net Ecological mapping and data quality assessment for the needs of ecosystem-based marine spatial management: case study Greek Ionian Sea and the adjacent gulfs Y. ISSARIS1,2, S. KATSANEVAKIS1,3, M. PANTAZI1, V. VASSILOPOULOU1, P. PANAYOTIDIS4, S. KAVADAS1, A. KOKKALI1, M. SALOMIDI4, A. FRANTZIS5, A. PANOU6, D. DAMALAS1,7, D. KLAOUDATOS1, D. SAKELLARIOU4, V. DRAKOPOULOU4, C. KYRIAKIDOU4, I. MAINA1, J. FRIC8, C. SMITH1, S. GIAKOUMI1 and G. KARRIS9 1 Institute of Marine Biological Resources, Hellenic Centre for Marine Research, Ag. Kosmas, Greece 2 Sector of Zoology and Marine Biology, Department of Biology, University of Athens, Zografos, Greece 3 European Commission, Joint Research Centre, Institute for Environment and Sustainability, Ispra, Italy 4 Institute of Oceanography, Hellenic Centre for Marine Research, Anavyssos, Greece 5 Pelagos Cetacean Research Institute, Vouliagmeni, Greece 6 Archipelagos – environment and development, Kifissia, Greece 7 European Commission, Joint Research Centre, Institute for the Protection and Security of the Citizen, Ispra, Italy 8 Hellenic Ornithological Society, Athens, Greece 9 Department of Environmental Technology and Ecology, TEI of the Ionian Islands, Zakynthos Island, Greece Corresponding author: [email protected] Received: 30 April 2012; Accepted: 2 November 2012; Published on line: 19 November 2012 Abstract Mapping of ecosystem components (natural and socioeconomic) is a prerequisite for ecosystem-based marine spatial manage- ment (EB-MSM). To initiate the process of EB-MSM in the Greek Ionian Sea and the adjacent gulfs, the main relevant ecosystem components were mapped based on existing spatial information and expert judgment. -
Updated Classification of Benthic Marine Habitat Types for The
Updated Classification of Benthic Marine Habitat Types for the Mediterranean Region TUNISIA - 2019 Legal notice: The designations employed and the presentation of the material in this document do not imply the expression of any opinion whatsoever on the part of the Specially Protected Areas Regional Activity Centre (SPA/RAC) and UN Environment/Mediterranean Action Plan (MAP) and those of the Lebanese Ministry of Environment concerning the legal status of any State, Territory, city or area, or of its authorities, or concerning the delimitation of their frontiers or boundaries. This publication was produced with the fi nancial support of the European Union in the framework of the MedMPA Network Project. Its contents are the sole responsibility of SPA/RAC and do not necessarily refl ect the views of the European Union. Copyright : All property rights of texts and content of different types of this publication belong to SPA/RAC. Reproduction of these texts and contents, in whole or in part, and in any form, is prohibited without prior written permission from SPA/RAC, except for educational and other non-commercial purposes, provided that the source is fully acknowledged. © 2019 - United Nations Environment Programme Mediterranean Action Plan Specially Protected Areas Regional Activity Centre (SPA/RAC) Boulevard du Leader Yasser Arafat B.P. 337 1080 Tunis Cedex - Tunisia. [email protected] For bibliographic purposes, this document may be cited as: SPA/RAC–UN Environment/MAP, 2019: Updated Classifi cation of Benthic Marine Habitat Types for the Mediterranean Region Layout : Atef OUERGHI Cover photos credit: © SPA/RAC, University of Seville, University of Alicante, Trainito E. -
Composition and Abundance of Octocorals in the Sea of Marmara, Where the Mediterranean Meets the Black Sea
SCIENTIA MARINA 79(1) March 2015, 125-135, Barcelona (Spain) ISSN-L: 0214-8358 doi: http://dx.doi.org/10.3989/scimar.04120.09A Composition and abundance of octocorals in the Sea of Marmara, where the Mediterranean meets the Black Sea Eda N. Topçu 1,2, Bayram Öztürk 1,2 1 Istanbul University Fisheries Faculty, Ordu cad No 200 Laleli, 34470 Istanbul, Turkey. E-mail: [email protected] 2 Turkish Marine Research Foundation, No 10, Beykoz, 81650, Istanbul, Turkey. Summary: Species composition and abundance of octocoral assemblages were investigated in the Sea of Marmara, which forms the connection between the Mediterranean and the Black Seas, two semi-enclosed seas with peculiar oceanographic conditions. Fourteen octocoral species were collected in the saline layer of the Marmara Sea (20-40 m), with a mean coral abundance of 5.21±5.11 colonies m–2 (mean ± SD) calculated from a total of 1390 colonies counted in transects. In spite of severe anthropogenic disturbances, dense assemblages of corals/gorgonians were observed during this study. The coral- ligenous communities—one of the most valuable structures of the Mediterranean Sea—harbored either Eunicella cavolini or Paramuricea macrospina as the dominant gorgonian in the Marmara Sea. Furthermore, the gorgonian assemblages of the Marmara Sea differed from those of the Mediterranean in their high abundance of P. macrospina and Spinimuricea klavereni, two species rarely encountered in the Mediterranean Sea at the studied depth range. The factors behind the observed differ- ences are discussed in regard to the particular oceanographic conditions of the Marmara Sea. Finally, we revised the main threats to corals/gorgonians in the Marmara Sea and provided some insights on management recommendations for coral conservation in this area. -
Integralni Program Monitoringa Crna Gora
Integralni program monitoringa Crna Gora Impresum Glavna koordinatorka: Nada Krstulović Koordinacija projektnih Ivana Stojanović, Marina Marković, Anis Zarrouk, Ivan Sekovski, Milena Bataković, Ivana Mitrović, Daniel Cebrian timova: Autori: EO1: Vesna Mačić, Slavica Petović i Ivan Guala (bentoski habitati); Mirko Đurović, Zdravko Ikica, Draško Holcer i Yakup Kaska (morski sisari i morske kornjače), Darko Saveljić i Marco Zenatello (morske ptice); Nada Krstulović, Dragana Drakulović i Branka Pestorić (plankton) EO2: Vesna Mačić, Argyro Zenetos EO3: Aleksandar Joksimović EO5: Robert Precali, Danijela Šuković, Jelena Rešetar, Vladimir Živković EO7: Luka Čalić, Radovan Kandić, Olivier Brivois EO8: Željka Čurović, Ivan Sekovski EO9: Danijela Šuković, Jelena Knežević, Carlos Guitart, Vladimir Živković, Aleksandra Ivanović, Darinka Joksimović EO10: Milica Mandić, Christos Ioakemidis Karte: Robert Precali Uređivanje: Dizajn naslovne strane: swim2birds.co.uk Grafički dizajn: Ljudomat Prevod: Mia Laušević Fotografija naslovne strane: Acanthella cannabina, Dražin vrt (Crna Gora) © Egidio Trainito Upotrijebljene odrednice i materijali prikazani u ovom dokumentu ne izražavaju mišljenje UNEP/MAP-a u pogledu pravnog statusa države, teritorije, grada ili oblasti, ili njihovih organa vlasti, ili u pogledu linija razgraničenja ili državnih granica. Ovu studiju izradili su PAP/RAC, SPA/RAC, UNEP/MAP i Ministarstvo ekologije, prostornog planiranja i urbanizma Crne Gore u okviru "GEF Adriatik" projekta, uz podršku Globalnog fonda za životnu sredinu (GEF). -
Cnidaria: Hexacorallia: Zoantharia
ARTICLE IN PRESS Organisms, Diversity & Evolution 9 (2009) 23–36 www.elsevier.de/ode Zoanthids (Cnidaria: Hexacorallia: Zoantharia) from shallow waters of the southern Chilean fjord region, with descriptions of a new genus and two new species Frederic Sinnigera,Ã, Verena Ha¨ussermannb,c aDepartment of Chemistry, Biology and Marine Science, University of the Ryukyus, 1 Senbaru, Nishihara, Okinawa 903-0213, Japan bFundacio´n Huinay, Puerto Montt, Chile cEscuela de Ciencias del Mar, Facultad de Recursos Naturales, Pontificia Universidad Cato´lica de Valparaı´so, Avda. Brazil 2950, Valparaı´so, Chile Received 27 June 2008; accepted 25 September 2008 Abstract The taxonomy of the order Zoantharia (¼ Zoanthidea ¼ Zoanthiniaria) is greatly hampered by the paucity of diagnostic morphological features. To facilitate discrimination between similar zoanthids, a combination of morphological and molecular analyses is applied here. The three most abundant zoanthid species in shallow waters of the southern Chilean fjord region are described. Comparison with other zoanthids using molecular markers reveals that two of them are new to science; these are described as Mesozoanthus fossii gen. n., sp. n. and Epizoanthus fiordicus sp. n. Their representatives grow on rocky substratum and do not live in symbiosis with demosponges. In the less abundant M. fossii, animals are greyish in colour and resemble members of Parazoanthus in growth form. Individual polyps can be up to 35 mm long. The more abundant E. fiordicus are also greyish; the polyps arise from thin stolons and reach only 12 mm in length. The third species studied is Parazoanthus elongatus McMurrich, 1904. For these three Chilean zoanthid species, in-situ photographs are presented as well as information on distribution, habitat and associated species. -
The Earliest Diverging Extant Scleractinian Corals Recovered by Mitochondrial Genomes Isabela G
www.nature.com/scientificreports OPEN The earliest diverging extant scleractinian corals recovered by mitochondrial genomes Isabela G. L. Seiblitz1,2*, Kátia C. C. Capel2, Jarosław Stolarski3, Zheng Bin Randolph Quek4, Danwei Huang4,5 & Marcelo V. Kitahara1,2 Evolutionary reconstructions of scleractinian corals have a discrepant proportion of zooxanthellate reef-building species in relation to their azooxanthellate deep-sea counterparts. In particular, the earliest diverging “Basal” lineage remains poorly studied compared to “Robust” and “Complex” corals. The lack of data from corals other than reef-building species impairs a broader understanding of scleractinian evolution. Here, based on complete mitogenomes, the early onset of azooxanthellate corals is explored focusing on one of the most morphologically distinct families, Micrabaciidae. Sequenced on both Illumina and Sanger platforms, mitogenomes of four micrabaciids range from 19,048 to 19,542 bp and have gene content and order similar to the majority of scleractinians. Phylogenies containing all mitochondrial genes confrm the monophyly of Micrabaciidae as a sister group to the rest of Scleractinia. This topology not only corroborates the hypothesis of a solitary and azooxanthellate ancestor for the order, but also agrees with the unique skeletal microstructure previously found in the family. Moreover, the early-diverging position of micrabaciids followed by gardineriids reinforces the previously observed macromorphological similarities between micrabaciids and Corallimorpharia as -
Cnidarian Phylogenetic Relationships As Revealed by Mitogenomics Ehsan Kayal1,2*, Béatrice Roure3, Hervé Philippe3, Allen G Collins4 and Dennis V Lavrov1
Kayal et al. BMC Evolutionary Biology 2013, 13:5 http://www.biomedcentral.com/1471-2148/13/5 RESEARCH ARTICLE Open Access Cnidarian phylogenetic relationships as revealed by mitogenomics Ehsan Kayal1,2*, Béatrice Roure3, Hervé Philippe3, Allen G Collins4 and Dennis V Lavrov1 Abstract Background: Cnidaria (corals, sea anemones, hydroids, jellyfish) is a phylum of relatively simple aquatic animals characterized by the presence of the cnidocyst: a cell containing a giant capsular organelle with an eversible tubule (cnida). Species within Cnidaria have life cycles that involve one or both of the two distinct body forms, a typically benthic polyp, which may or may not be colonial, and a typically pelagic mostly solitary medusa. The currently accepted taxonomic scheme subdivides Cnidaria into two main assemblages: Anthozoa (Hexacorallia + Octocorallia) – cnidarians with a reproductive polyp and the absence of a medusa stage – and Medusozoa (Cubozoa, Hydrozoa, Scyphozoa, Staurozoa) – cnidarians that usually possess a reproductive medusa stage. Hypothesized relationships among these taxa greatly impact interpretations of cnidarian character evolution. Results: We expanded the sampling of cnidarian mitochondrial genomes, particularly from Medusozoa, to reevaluate phylogenetic relationships within Cnidaria. Our phylogenetic analyses based on a mitochogenomic dataset support many prior hypotheses, including monophyly of Hexacorallia, Octocorallia, Medusozoa, Cubozoa, Staurozoa, Hydrozoa, Carybdeida, Chirodropida, and Hydroidolina, but reject the monophyly of Anthozoa, indicating that the Octocorallia + Medusozoa relationship is not the result of sampling bias, as proposed earlier. Further, our analyses contradict Scyphozoa [Discomedusae + Coronatae], Acraspeda [Cubozoa + Scyphozoa], as well as the hypothesis that Staurozoa is the sister group to all the other medusozoans. Conclusions: Cnidarian mitochondrial genomic data contain phylogenetic signal informative for understanding the evolutionary history of this phylum. -
Halogenated Tyrosine Derivatives from the Tropical Eastern Pacific
Article Cite This: J. Nat. Prod. 2019, 82, 1354−1360 pubs.acs.org/jnp Halogenated Tyrosine Derivatives from the Tropical Eastern Pacific Zoantharians Antipathozoanthus hickmani and Parazoanthus darwini † ‡ † § ‡ ⊥ ∥ Paul O. Guillen, , Karla B. Jaramillo, , Laurence Jennings, Gregorý Genta-Jouve, , # # # † Mercedes de la Cruz, Bastien Cautain, Fernando Reyes, Jenny Rodríguez, ‡ and Olivier P. Thomas*, † ESPOL Escuela Superior Politecnicá del Litoral, ESPOL, Centro Nacional de Acuacultura e Investigaciones Marinas, Campus Gustavo Galindo km. 30.5 vía Perimetral, P.O. Box 09-01-5863, Guayaquil, Ecuador ‡ Marine Biodiscovery, School of Chemistry and Ryan Institute, National University of Ireland Galway (NUI Galway), University Road, H91 TK33 Galway, Ireland § Zoology, School of Natural Sciences and Ryan Institute, National University of Ireland Galway (NUI Galway), University Road, H91 TK33 Galway, Ireland ⊥ ́ Equipe C-TAC, UMR CNRS 8038 CiTCoM, UniversitéParis Descartes, 4 Avenue de l’Observatoire, 75006 Paris, France ∥ UnitéMoleculeś de Communication et Adaptation des Micro-organismes (UMR 7245), Sorbonne Universites,́ Museuḿ National d’Histoire Naturelle, CNRS, Paris, France # Fundacioń MEDINA, Centro de Excelencia en Investigacioń de Medicamentos Innovadores en Andalucía, Avenida del Conocimiento 34, Parque Tecnologicó de Ciencias de la Salud, E-18016, Armilla, Granada, Spain *S Supporting Information ABSTRACT: In the search for bioactive marine natural products from zoantharians of the Tropical Eastern Pacific, four new tyrosine dipeptides, -
Hourigan TF, Etnoyer PJ, Cairns SD (2017) Introduction to the State of Deep‐Sea Coral and Sponge Ecosystems of the United States
Introduction to the State of Deep-Sea Coral and Sponge Ecosystems of the United States Chapter 1 in The State of Deep‐Sea Coral and Sponge Ecosystems of the United States Report Recommended citation: Hourigan TF, Etnoyer PJ, Cairns SD (2017) Introduction to the State of Deep‐Sea Coral and Sponge Ecosystems of the United States. In: Hourigan TF, Etnoyer, PJ, Cairns, SD (eds.). The State of Deep‐Sea Coral and Sponge Ecosystems of the United States. NOAA Technical Memorandum NMFS‐OHC‐4, Silver Spring, MD. 38 p. Available online: http://deepseacoraldata.noaa.gov/library. Iridogorgia soft coral with squat lobsters in the northwestern Gulf of Mexico. Courtesy of the NOAA Office of Ocean xii Exploration and Research. INTRODUCTION TO THE STATE OF DEEP‐SEA CORAL AND SPONGE ECOSYSTEMS OF THE UNITED STATES INTRODUCTION TO THE Thomas F. STATE OF DEEP-SEA Hourigan1*, Peter J. CORAL AND SPONGE Etnoyer2, and ECOSYSTEMS OF THE Stephen D. Cairns3 UNITED STATES 1 NOAA Deep Sea Coral Research and Technology Program, Office of Habitat Conservation, Silver I. Introduction Spring, MD * Corresponding Author: Large, long‐lived, sessile organisms contribute structural [email protected] complexity to seafloor habitats and play an important role in marine ecosystems. In deep or cold oceanic waters, corals and 2 NOAA Center for Coastal sponges are the most important organisms forming such biogenic Monitoring and Assessment, National habitats (Roberts et al. 2009, Buhl‐Mortensen et al. 2010, Hogg et al. Centers for Coastal Ocean 2010, Rossi et al. 2017). They increase the physical heterogeneity of Science, Charleston, SC habitat, provide refuge and substrate, increase the number and 3 National Museum of availability of micro‐habitats for other organisms, and thereby Natural History, create hotspots of biological diversity in the deep sea. -
Review of Trade in Ornamental Coral, Coral Products and Reef Associated Species to the United States
© Anja G. Burns / WWF-US Review of Trade in Ornamental Coral, Coral Products and Reef Associated Species to the United States November 2012 World Wildlife Fund, Washington DC 1 © WWF. 2012 All rights reserved. This material has no commercial purposes. The reproduction of the material contained in this product is prohibited for sale or other commercial purposes. Any reproduction in full or in part of this publication must credit WWF as copyright owner. The document was financed by Kingfisher Foundation. The opinions, findings and conclusions stated herein are those of the author[s] and do not necessarily reflect those of the donor and partner organizations listed in the acknowledgements. Suggested citation: Craig, V., Allan, C., Lyet, A. Brittain, A., Richman, E, 2011. Review of trade in ornamental coral, coral products and reef associated species to the United States. World Wildlife Fund, Washington DC. USA, 2 Acknowledgements Many people were involved in the production of this report. The US trade data analyses in this report were produced by Valerie Craig and Arnaud Lyet PhD The project was managed by and conclusions drawn by Crawford Allan Research and case studies were provided by Anna Brittain and Eliza Richman Additional research and product production by Ben Freitas Aquaria trade research by Brendan Galloway The production team would like to thank the following people for their critical inputs towards this report: Environmental Defense Fund: Cara Cooper, Ted Morton Defenders of Wildlife: Daniel Thornhill Humane Society International: Teresa Telecky WWF: America Pintabutr, Roberta Elias, Elizabeth Schuler, TRAFFIC: Ernie Cooper, Steve Broad, Julie Gray for report reviews 3 Contents Acknowledgements ................................................................................................................................... -
Radiocarbon-Based Ages and Growth Rates of Hawaiian Deep-Sea Corals
MARINE ECOLOGY PROGRESS SERIES Vol. 327: 1–14, 2006 Published December 7 Mar Ecol Prog Ser OPENPEN ACCESSCCESS FEATURE ARTICLE Radiocarbon-based ages and growth rates of Hawaiian deep-sea corals E. Brendan Roark1, 4,*, Thomas P. Guilderson2, 3, Robert B. Dunbar4, B. Lynn Ingram1, 5 1Department of Geography, University of California, Berkeley, California 94720-4740, USA 2Center for Accelerator Mass Spectrometry, LLNL, L-397 7000 East Avenue, Livermore, California 94551, USA 3Department of Ocean Sciences and Institute of Marine Sciences, University of California, Santa Cruz, California 95064, USA 4Geological and Environmental Sciences, Stanford University, Stanford, California 94305-2115, USA 5Department of Earth and Planetary Science, University of California, Berkeley, California 94720-4767, USA ABSTRACT: The radial growth rates and ages of 3 differ- ent groups of Hawaiian deep-sea ‘corals’ were deter- mined using radiocarbon measurements. Specimens of Corallium secundum, Gerardia sp., and Leiopathes glaberrima were collected from 450 ± 40 m depth at the Makapuu deep-sea coral bed off the southeast coast of Oahu, Hawaii, USA, using a submersible vessel (PISCES V). Specimens of Antipathes dichotoma were collected at 50 m depth off Lahaina, Maui, Hawaii. The primary source of carbon to the calcitic C. secundum skeleton is in situ dissolved inorganic carbon (DIC). Using ‘bomb 14C’ time markers we calculated radial growth rates of ~170 µm yr–1 and ages of 67 to 71 yr for specimens of C. secundum up to 28 cm tall. Gerardia sp., A. dichotoma, and L. glaberrima have proteinaceous skeletons, and la- bile particulate organic carbon (POC) is their primary Radiocarbon dating shows that deep-sea corals grow more source of architectural carbon.