(Cnidaria, Hexacorallia) from the Galápagos Islands
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Halogenated Tyrosine Derivatives from the Tropical Eastern Pacific
Article Cite This: J. Nat. Prod. 2019, 82, 1354−1360 pubs.acs.org/jnp Halogenated Tyrosine Derivatives from the Tropical Eastern Pacific Zoantharians Antipathozoanthus hickmani and Parazoanthus darwini † ‡ † § ‡ ⊥ ∥ Paul O. Guillen, , Karla B. Jaramillo, , Laurence Jennings, Gregorý Genta-Jouve, , # # # † Mercedes de la Cruz, Bastien Cautain, Fernando Reyes, Jenny Rodríguez, ‡ and Olivier P. Thomas*, † ESPOL Escuela Superior Politecnicá del Litoral, ESPOL, Centro Nacional de Acuacultura e Investigaciones Marinas, Campus Gustavo Galindo km. 30.5 vía Perimetral, P.O. Box 09-01-5863, Guayaquil, Ecuador ‡ Marine Biodiscovery, School of Chemistry and Ryan Institute, National University of Ireland Galway (NUI Galway), University Road, H91 TK33 Galway, Ireland § Zoology, School of Natural Sciences and Ryan Institute, National University of Ireland Galway (NUI Galway), University Road, H91 TK33 Galway, Ireland ⊥ ́ Equipe C-TAC, UMR CNRS 8038 CiTCoM, UniversitéParis Descartes, 4 Avenue de l’Observatoire, 75006 Paris, France ∥ UnitéMoleculeś de Communication et Adaptation des Micro-organismes (UMR 7245), Sorbonne Universites,́ Museuḿ National d’Histoire Naturelle, CNRS, Paris, France # Fundacioń MEDINA, Centro de Excelencia en Investigacioń de Medicamentos Innovadores en Andalucía, Avenida del Conocimiento 34, Parque Tecnologicó de Ciencias de la Salud, E-18016, Armilla, Granada, Spain *S Supporting Information ABSTRACT: In the search for bioactive marine natural products from zoantharians of the Tropical Eastern Pacific, four new tyrosine dipeptides, -
Three New Species and the Molecular Phylogeny of Antipathozoanthus
A peer-reviewed open-access journal ZooKeys 725: 97–122Three (2017) new species and the molecular phylogeny ofAntipathozoanthus ... 97 doi: 10.3897/zookeys.725.21006 RESEARCH ARTICLE http://zookeys.pensoft.net Launched to accelerate biodiversity research Three new species and the molecular phylogeny of Antipathozoanthus from the Indo-Pacific Ocean (Anthozoa, Hexacorallia, Zoantharia) Hiroki Kise1,2, Takuma Fujii1,3, Giovanni Diego Masucci1, Piera Biondi1, James Davis Reimer1,2,4 1 Molecular Invertebrate Systematics and Ecology Laboratory, Graduate School of Engineering and Science, University of the Ryukyus, 1 Senbaru, Nishihara, Okinawa 903-0213, Japan 2 Palau International Coral Reef Center, 1-M-Dock Road, Koror, Palau 96940 3 Research Center for Island Studies Amami Station, Kagoshima University, Naze-Yanagimachi 2-1, Amami, Kagoshima 894-0032, Japan 4 Tropical Biosphere Research Cen- ter, University of the Ryukyus, 1 Senbaru, Nishihara, Okinawa 903-0213, Japan Corresponding author: Hiroki Kise ([email protected]) Academic editor: B.W. Hoeksema | Received 15 September 2017 | Accepted 7 November 2017 | Published 29 December 2017 http://zoobank.org/E47535C1-21CF-417C-A212-F6E819080565 Citation: Kise H, Fujii T, Masucci GD, Biondi P, Reimer JD (2017) Three new species and the molecular phylogeny of Antipathozoanthus from the Indo-Pacific Ocean (Anthozoa, Hexacorallia, Zoantharia). ZooKeys 725: 97–122.https:// doi.org/10.3897/zookeys.725.21006 Abstract In this study, three new species of macrocnemic zoantharians (Hexacorallia, Zoantharia) are described from localities in the Indo-Pacific Ocean including the Red Sea, the Maldives, Palau, and southern Ja- pan: Antipathozoanthus obscurus sp. n., A. remengesaui sp. n., and A. cavernus sp. -
Zoanthids of the Cape Verde Islands and Their Symbionts: Previously Unexamined Diversity in the Northeastern Atlantic
Contributions to Zoology, 79 (4) 147-163 (2010) Zoanthids of the Cape Verde Islands and their symbionts: previously unexamined diversity in the Northeastern Atlantic James D. Reimer1, 2, 4, Mamiko Hirose1, Peter Wirtz3 1 Molecular Invertebrate Systematics and Ecology Laboratory, Rising Star Program, Transdisciplinary Research Organization for Subtropical Island Studies (TRO-SIS), University of the Ryukyus, Senbaru 1, Nishihara, Okinawa 903-0213, Japan 2 Marine Biodiversity Research Program, Institute of Biogeosciences, Japan Agency for Marine-Earth Science and Technology (JAMSTEC), 2-15 Natsushima, Yokosuka, Kanagawa 237-0061, Japan 3 Centro de Ciências do Mar, Universidade do Algarve, Campus de Gambelas, PT 8005-139 Faro, Portugal 4 E-mail: [email protected] Key words: Cape Verde Islands, Cnidaria, Symbiodinium, undescribed species, zoanthid Abstract Symbiodinium ITS-rDNA ..................................................... 155 Discussion ...................................................................................... 155 The marine invertebrate fauna of the Cape Verde Islands con- Suborder Brachycnemina .................................................... 155 tains many endemic species due to their isolated location in the Suborder Macrocnemina ...................................................... 157 eastern Atlantic, yet research has not been conducted on most Conclusions ............................................................................. 158 taxa here. One such group are the zoanthids or mat anemones, Acknowledgements -
Assessing the Zoantharian Diversity of the Tropical Eastern Pacific
www.nature.com/scientificreports OPEN Assessing the Zoantharian Diversity of the Tropical Eastern Pacifc through an Integrative Received: 13 December 2017 Accepted: 13 April 2018 Approach Published: xx xx xxxx Karla B. Jaramillo 1,2, Miriam Reverter3, Paul O. Guillen 1,3, Grace McCormack2, Jenny Rodriguez 1, Frédéric Sinniger 4 & Olivier P. Thomas 3 Zoantharians represent a group of marine invertebrates widely distributed from shallow waters to the deep sea. Despite a high diversity and abundance in the rocky reefs of the Pacifc Ocean, very few studies have been reported on the diversity of this group in the Tropical Eastern Pacifc coasts. While molecular techniques recently clarifed some taxonomic relationships within the order, the taxonomy of zoantharians is still highly challenging due to a lack of clear morphological characters and confusing use of diferent data in previous studies. Our frst insight into the zoantharian diversity at El Pelado Marine Protected Area - Ecuador led to the identifcation of six species: Terrazoanthus patagonichus; Terrazoanthus sp.; Antipathozoanthus hickmani; Parazoanthus darwini; Zoanthus cf. pulchellus; and Zoanthus cf. sociatus. A metabolomic approach using UHPLC-HRMS was proven to be very efcient as a complementary tool in the systematics of these species and specialized metabolites of the ecdysteroid and alkaloid families were identifed as key biomarkers for interspecifc discrimination. These results show good promise for an application of this integrative approach to other zoantharians. Te marine biodiversity of the Tropical Eastern Pacifc ecoregion has been poorly studied in comparison to hot- spots of biodiversity like the Central Indo-Pacifc with a notable exception of the Galapagos islands1. -
Evolution of Anthozoan Polyp Retraction Mechanisms: Convergent
Swain et al. BMC Evolutionary Biology (2015) 15:123 DOI 10.1186/s12862-015-0406-1 RESEARCH ARTICLE Open Access Evolution of anthozoan polyp retraction mechanisms: convergent functional morphology and evolutionary allometry of the marginal musculature in order Zoanthidea (Cnidaria: Anthozoa: Hexacorallia) Timothy D. Swain1,2*, Jennifer L. Schellinger3, Anna M. Strimaitis3 and Kim E. Reuter4 Abstract Background: Retraction is among the most important basic behaviors of anthozoan Cnidaria polyps and is achieved through the coordinated contraction of at least six different muscle groups. Across the Anthozoa, these muscles range from unrecognizable atrophies to massive hypertrophies, producing a wide diversity of retraction abilities and functional morphologies. The marginal musculature is often the single largest component of the retraction mechanism and is composed of a diversity of muscular, attachment, and structural features. Although the arrangements of these features have defined the higher taxonomy of Zoanthidea for more than 100 years, a decade of inferring phylogenies from nucleotide sequences has demonstrated fundamental misconceptions of their evolution. Results: Here we expand the diversity of known marginal muscle forms from two to at least ten basic states and reconstruct the evolution of its functional morphology across the most comprehensive molecular phylogeny available. We demonstrate that the evolution of these forms follows a series of transitions that are much more complex than previously hypothesized and converge on similar forms multiple times. Evolution of the marginal musculature and its attachment and support structures are partially scaled according to variation in polyp and muscle size, but also vary through evolutionary allometry. Conclusions: Although the retraction mechanisms are diverse and their evolutionary histories complex, their morphologies are largely reflective of the evolutionary relationships among Zoanthidea higher taxa and may offer a key feature for integrative systematics. -
2018-Jaramillo Et Al. Scirep.P
Assessing the Zoantharian Diversity of the Tropical Eastern Pacific through an Integrative Approach Karla Jaramillo, Miriam Reverter, Paul Guillen, Grace Mccormack, Jenny Rodriguez, Frédéric Sinniger, Olivier Thomas To cite this version: Karla Jaramillo, Miriam Reverter, Paul Guillen, Grace Mccormack, Jenny Rodriguez, et al.. Assessing the Zoantharian Diversity of the Tropical Eastern Pacific through an Integrative Approach. Scientific Reports, Nature Publishing Group, 2018, 10.1038/s41598-018-25086-4. hal-03020857 HAL Id: hal-03020857 https://hal.archives-ouvertes.fr/hal-03020857 Submitted on 24 Nov 2020 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. www.nature.com/scientificreports OPEN Assessing the Zoantharian Diversity of the Tropical Eastern Pacifc through an Integrative Received: 13 December 2017 Accepted: 13 April 2018 Approach Published: xx xx xxxx Karla B. Jaramillo 1,2, Miriam Reverter3, Paul O. Guillen 1,3, Grace McCormack2, Jenny Rodriguez 1, Frédéric Sinniger 4 & Olivier P. Thomas 3 Zoantharians represent a group of marine invertebrates widely distributed from shallow waters to the deep sea. Despite a high diversity and abundance in the rocky reefs of the Pacifc Ocean, very few studies have been reported on the diversity of this group in the Tropical Eastern Pacifc coasts. -
L'anémone Buissonnante Savalia Savaglia (Bertoloni, 1819)
1 L'anémone buissonnante Savalia savaglia (Bertoloni, 1819) Citation de cette fiche : Noël P., Francour P., 2017. L'anémone buissonnante Savalia savaglia (Bertoloni, 1819). in Muséum national d'Histoire naturelle [Ed.], 4 septembre 2017. Inventaire national du Patrimoine naturel, pp. 1-10, site web http://inpn.mnhn.fr Contact des auteurs : Pierre Noël, UMS 2006 "Patrimoine naturel", Muséum national d'Histoire naturelle, 43 rue Buffon (CP 48), 75005 Paris ; e-mail [email protected] et Patrice Francour, Laboratoire ECOMERS, FRE 3729, Université Nice-Sophia Antipolis, CNRS, 28 av. de Valrose, F-06108 Nice cedex 02 e-mail [email protected] Résumé. L'anémone buissonnante est une anémone de mer atypique à allure de gorgone et formant des colonies pouvant atteindre 1 m et de couleur blanche, jaune ou parfois rose. Les polypes sont le plus souvent jaunes. Les ramifications sont couvertes de polypes pouvant mesurer jusqu'à 3 cm et dotés d'une couronne d'une petite trentaine de tentacules disposés en 2 séries. La colonie est grossièrement dressée suivant un plan orienté face au courant pour que les polypes puissent capturer un maximum de particules organiques. Cette espèce typique du coralligène colonise de préférence la gorgone rouge Paramuricea clavata. Elle vit surtout sur le plateau continental mais elle se rencontre également sur le talus continental jusqu'à -900 mètres. Elle est présente en Méditerranée et en Macaronésie. Figure 1. L'anémone buissonnante Savalia savaglia in situ (Photo © Patrice Francour). Classification : Phylum Cnidaria Hatscheck, 1888 ; Classe Anthozoa Ehrenberg, 1834 ; Sous-classe Hexacorallia Haeckel, 1896 ; Ordre Zoantharia Gray, 1832 ; Sous-ordre Macrocnemina Haddon & Shackleton, 1891 ; Famille Parazoanthidae Delage & Hérouard, 1901 ; Genre Savalia. -
Four New Species and One New Genus of Zoanthids (Cnidaria, Hexacorallia) from the Galápagos Islands
A peer-reviewed open-access journal ZooKeys 42: 1–36Four (2010) new species and one new genus of zoanthids (Cnidaria, Hexacorallia) from... 1 doi: 10.3897/zookeys.42.378 RESEARCH ARTICLE www.pensoftonline.net/zookeys Launched to accelerate biodiversity research Four new species and one new genus of zoanthids (Cnidaria, Hexacorallia) from the Galápagos Islands James Davis Reimer1,2,†, Takuma Fujii3,‡ 1 Molecular Invertebrate Systematics and Ecology Laboratory, Rising Star Program, Trans-disciplinary Organi- zation for Subtropical Island Studies, University of the Ryukyus, 1 Senbaru, Nishihara, Okinawa 903-0213, Ja- pan 2 Marine Biodiversity Research Program, Institute of Biogeosciences, Japan Agency for Marine-Earth Science and Technology (JAMSTEC), 2-15 Natsushima, Yokosuka, Kanagawa 237-0061, Japan 3 Graduate School of Engineering and Science, University of the Ryukyus, 1 Senbaru, Nishihara, Okinawa 903-0213, Japan † urn:lsid:zoobank.org:author:3CD21222-ADA1-4A28-BE8B-7F9A9DEBA0F2 ‡ urn:lsid:zoobank.org:author:5A117804-991D-4F75-889B-7B1844BF4A99 Corresponding author: James Davis Reimer ( [email protected]) Academic editor: Bert W. Hoeksema | Received 31 December 2009 | Accepted 15 March 2010 | Published 1 April 2010 urn:lsid:zoobank.org:pub:7E58A32B-DF8A-4795-B0D6-C37CB3B89A0E Citation: Reimer JD, Fujii T (2010) Four new species and one new genus of zoanthids (Cnidaria, Hexacorallia) from the Galápagos Islands. ZooKeys 42: 1–36. doi: 10.3897/zookeys.42.378 Abstract Recent research has confi rmed the presence of several species of undescribed macrocnemic zoanthids (Cnidaria: Hexacorallia: Zoantharia: Macrocnemina) in the Galápagos. In this study four new species, including two belonging to a new genus, are described. -
The Resurrection of the Genus Bergia (Anthozoa, Zoantharia, Parazoanthidae)
Systematics and Biodiversity ISSN: 1477-2000 (Print) 1478-0933 (Online) Journal homepage: http://www.tandfonline.com/loi/tsab20 The resurrection of the genus Bergia (Anthozoa, Zoantharia, Parazoanthidae) Javier Montenegro, Martyn E. Y. Low & James Davis Reimer To cite this article: Javier Montenegro, Martyn E. Y. Low & James Davis Reimer (2015): The resurrection of the genus Bergia (Anthozoa, Zoantharia, Parazoanthidae), Systematics and Biodiversity, DOI: 10.1080/14772000.2015.1101028 To link to this article: http://dx.doi.org/10.1080/14772000.2015.1101028 View supplementary material Published online: 21 Dec 2015. Submit your article to this journal View related articles View Crossmark data Full Terms & Conditions of access and use can be found at http://www.tandfonline.com/action/journalInformation?journalCode=tsab20 Download by: [Ryukyu University] Date: 21 December 2015, At: 17:23 Systematics and Biodiversity (2015), 1À11 Research Article The resurrection of the genus Bergia (Anthozoa, Zoantharia, Parazoanthidae) JAVIER MONTENEGRO1,3, MARTYN E. Y. LOW2 & JAMES DAVIS REIMER1,3 1Molecular Invertebrate Systematics and Ecology Laboratory, Graduate School of Engineering and Science, University of the Ryukyus, Senbaru 1, Nishihara, Okinawa 903-0213, Japan 2Lee Kong Chian Natural History Museum, Faculty of Science, National University of Singapore, 2 Conservatory Drive, Singapore 117377, Republic of Singapore 3Tropical Biosphere Research Center, University of the Ryukyus, Senbaru 1, Nishihara, Okinawa 903-0213, Japan (Received 5 May 2015; accepted 20 August 2015) The genus Bergia was established by Duchassaing de Fonbressin and Michelotti in 1860, for two species, Bergia catelunaris and B. vialactea. Subsequently, in 1903 Duerden recognized these two species as conspecific, and used B. -
Exploring the Biodiversity of Understudied Benthic Taxa at Mesophotic and Deeper Depths: Examples from the Order Zoantharia (Anthozoa: Hexacorallia)
fmars-06-00305 June 15, 2019 Time: 17:44 # 1 ORIGINAL RESEARCH published: 18 June 2019 doi: 10.3389/fmars.2019.00305 Exploring the Biodiversity of Understudied Benthic Taxa at Mesophotic and Deeper Depths: Examples From the Order Zoantharia (Anthozoa: Hexacorallia) James Davis Reimer1,2*, Hiroki Kise1, Maria E. A. Santos1, Dhugal John Lindsay3,4, Richard L. Pyle5, Joshua M. Copus6, Brian W. Bowen6, Masanori Nonaka7, Takuo Higashiji7 and Yehuda Benayahu8 1 Molecular Invertebrate Systematics and Ecology Laboratory, Graduate School of Engineering and Science, University of the Ryukyus, Nishihara, Japan, 2 Tropical Biosphere Research Center, University of the Ryukyus, Nishihara, Japan, 3 Advanced Science-Technology Research (ASTER) Program, Institute for Extra-cutting-edge Science and Technology Avant-garde Research (X-star), Japan Agency for Marine-Earth Science and Technology (JAMSTEC), Yokosuka, Japan, 4 Laboratory of Aquatic Ecology, School of Marine Bioscience, Kitasato University, Sagamihara, Japan, 5 Bernice P. Bishop Museum, Honolulu, HI, United States, 6 Hawaii Institute of Marine Biology, Kaneohe, HI, United States, 7 Okinawa Churaumi Aquarium, Okinawa Churashima Foundation, Motobu, Japan, 8 Department of Zoology, George S. Wise Faculty of Life Sciences, Tel Aviv University, Tel Aviv, Israel Edited by: Johannes F. Imhoff, Research on so-called “minor taxa” at mesophotic depths has lagged behind that of GEOMAR Helmholtz Centre for Ocean Research Kiel, Germany more commonly researched groups such as fish or hard corals. Exemplar taxa include Reviewed by: species of the order Zoantharia, benthic colonial anemones that are cosmopolitan in Cristina Dorador, distribution but understudied in many ecoregion and ecosystems. In this study, we University of Antofagasta, Chile Atoosa Noori Koupaei, examine the results of rare mesophotic to deep sea surveys (one rebreather, one Islamic Azad University, Iran remotely operated submersible (ROV) C net survey, two ROV surveys) from Japan *Correspondence: and Israel. -
First Record of the Genus Umimayanthus from Palau
Marine Biodiversity Records, page 1 of 5. # Marine Biological Association of the United Kingdom, 2015 doi:10.1017/S1755267215001177; Vol. 8; e143; 2015 Published online First record of the genus Umimayanthus from Palau and Micronesia javier montenegro1, julien lorion1,2,3 and james davis reimer1,4 1Molecular Invertebrate Systematics and Ecology Laboratory, Graduate School of Engineering and Science, University of the Ryukyus, Senbaru 1, Nishihara, Okinawa 903-0213, Japan, 2Palau International Coral Reef Center, P.O. Box 7086, 1 M-Dock Road, Koror, PW 96940, Palau, 3Palau Community College, P.O. Box 9, Koror, PW 96940, Palau, 4Tropical Biosphere Research Center, University of the Ryukyus, Senbaru 1, Nishihara, Okinawa 903-0213, Japan Until recently, the only sponge-associated genera in the order Zoantharia were Parazoanthus (family Parazoanthidae), Epizoanthus and Thoracactis (family Epizoanthidae), both within the suborder Macrocnemina. The taxonomy of the genus Parazoanthus, as originally described, has been undergoing revision since 2010, with several species, genera and even families described. In 2015, multiple molecular markers were used in combination with morphological characteristics to erect the genus Umimayanthus inside the family Parazoanthidae. It included three species described from southern Japan, with other records for some of the species from the Great Barrier Reef, New Caledonia and the Red Sea. However, little is known of its distribution in the Pacific Islands. Here we report on the finding of Umimayanthus specimens in Palau, Micronesia, representing the first records for this region. A total of 32 specimens of Umimayanthus were collected from seven different locations; eight of the specimens were identified as Umimayanthus chanpuru, while the remaining 24 colonies were only identified to genus level. -
年 報annual Report 2017
平成 29年度 平成 29 年度 年 報 年 報 Annual Report 2017 ータンセ究研圏物生帯熱学大球琉 点拠究研同共・用利同共 共同利用・共同研究拠点 Joint-use Research Institute 琉球大学熱帯生物圏研究センター TROPICAL BIOSPHERE RESEARCH CENTER UNIVERSITY OF THE RYUKYUS 目 次 沿革と施設構成……………………………………………………………………………… 1 組織図………………………………………………………………………………………… 2 共同利用・共同研究拠点…………………………………………………………………… 3 職員配置 …………………………………………………………………………………… 4 客員研究部門………………………………………………………………………………… 6 構成員と研究課題 ・サンゴ礁生物科学部門………………………………………………………………… 7 ・島嶼多様性生物学部門……………………………………………………………… 11 ・感染生物学部門……………………………………………………………………… 17 ・応用生命情報学部門………………………………………………………………… 20 ・陸海フィールド生態学分野………………………………………………………… 23 同研究事業 ・平成29年度共同利用・共同研究一覧……………………………………………… 24 ・拠点形成費による共同利用研究会………………………………………………… 25 ・拠点形成費による共同利用・共同研究の成果…………………………………… 26 ・共同研究等( 拠点形成費による共同利用研究会の成果) ………………………… 36 ・学術集会の開催(拠点形成費の共同研究事業以外のもの) …………………… 38 業 績(原著論文・総説・著書・学会講演等・受賞等) …………………………… 39 外部資金獲得状況………………………………………………………………………… 60 教育活動(学部教育・大学院教育・その他の教育活動) …………………………… 64 社会活動・地域貢献……………………………………………………………………… 69 国際活動・国際協力等…………………………………………………………………… 71 その他の資料・新聞報道等……………………………………………………………… 72 センターの利用状況……………………………………………………………………… 73 沿革と施設構成 熱帯生物圏研究センターは、個々の大学の枠を越えて、大型の研究設備や大量の資料・データ等を全国の研究者 が共同で利用したり、共同研究を行う目的で2008年7月に、文部科学大臣によって創設された「共同利用・共同研究 拠点」の認定制度により、2009年に「共同利用・共同研究拠点」として認定された、琉球大学の研究センターである。 熱帯生物圏研究センターは、全国共同利用施設であった旧・熱帯生物圏研究センターと、琉球大学の学内共同利用 施設であった旧・分子生命科学研究センターが統合し、2009年度に発足した。 旧・熱帯生物圈研究センターは、日本最南端に位置する琉球大学の立地条件を生かし、熱帯・亜熱帯における生 物の多様性や環境との相互作用に関する研究拠点形成を目的とし、学内共同利用教育研究施設であった熱帯海洋科 学センター(現・瀬底研究施設)、農学部附属であった熱帯農学研究施設(現・西表研究施設)、琉球大学千原キャン パス内に新たに設置された西原研究室(現・西原研究施設)が統合し、1994年に仝国共同利用施設として発足した。 旧・分子生命科学研究センターは、1991年に琉球大学遺伝子実験施設を改組し、琉球大学のバイオサイエンス研