The Plant Pathogenic Genus Neocordana
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Monilochaetes and Allied Genera of the Glomerellales, and a Reconsideration of Families in the Microascales
available online at www.studiesinmycology.org StudieS in Mycology 68: 163–191. 2011. doi:10.3114/sim.2011.68.07 Monilochaetes and allied genera of the Glomerellales, and a reconsideration of families in the Microascales M. Réblová1*, W. Gams2 and K.A. Seifert3 1Department of Taxonomy, Institute of Botany of the Academy of Sciences, CZ – 252 43 Průhonice, Czech Republic; 2Molenweg 15, 3743CK Baarn, The Netherlands; 3Biodiversity (Mycology and Botany), Agriculture and Agri-Food Canada, Ottawa, Ontario, K1A 0C6, Canada *Correspondence: Martina Réblová, [email protected] Abstract: We examined the phylogenetic relationships of two species that mimic Chaetosphaeria in teleomorph and anamorph morphologies, Chaetosphaeria tulasneorum with a Cylindrotrichum anamorph and Australiasca queenslandica with a Dischloridium anamorph. Four data sets were analysed: a) the internal transcribed spacer region including ITS1, 5.8S rDNA and ITS2 (ITS), b) nc28S (ncLSU) rDNA, c) nc18S (ncSSU) rDNA, and d) a combined data set of ncLSU-ncSSU-RPB2 (ribosomal polymerase B2). The traditional placement of Ch. tulasneorum in the Microascales based on ncLSU sequences is unsupported and Australiasca does not belong to the Chaetosphaeriaceae. Both holomorph species are nested within the Glomerellales. A new genus, Reticulascus, is introduced for Ch. tulasneorum with associated Cylindrotrichum anamorph; another species of Reticulascus and its anamorph in Cylindrotrichum are described as new. The taxonomic structure of the Glomerellales is clarified and the name is validly published. As delimited here, it includes three families, the Glomerellaceae and the newly described Australiascaceae and Reticulascaceae. Based on ITS and ncLSU rDNA sequence analyses, we confirm the synonymy of the anamorph generaDischloridium with Monilochaetes. -
Colletotrichum – Names in Current Use
Online advance Fungal Diversity Colletotrichum – names in current use Hyde, K.D.1,7*, Cai, L.2, Cannon, P.F.3, Crouch, J.A.4, Crous, P.W.5, Damm, U. 5, Goodwin, P.H.6, Chen, H.7, Johnston, P.R.8, Jones, E.B.G.9, Liu, Z.Y.10, McKenzie, E.H.C.8, Moriwaki, J.11, Noireung, P.1, Pennycook, S.R.8, Pfenning, L.H.12, Prihastuti, H.1, Sato, T.13, Shivas, R.G.14, Tan, Y.P.14, Taylor, P.W.J.15, Weir, B.S.8, Yang, Y.L.10,16 and Zhang, J.Z.17 1,School of Science, Mae Fah Luang University, Chaing Rai, Thailand 2Research & Development Centre, Novozymes, Beijing 100085, PR China 3CABI, Bakeham Lane, Egham, Surrey TW20 9TY, UK and Royal Botanic Gardens, Kew, Richmond, Surrey TW9 3AB, UK 4Cereal Disease Laboratory, U.S. Department of Agriculture, Agricultural Research Service, 1551 Lindig Street, St. Paul, MN 55108, USA 5CBS-KNAW Fungal Biodiversity Centre, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands 6School of Environmental Sciences, University of Guelph, Guelph, Ontario, N1G 2W1, Canada 7International Fungal Research & Development Centre, The Research Institute of Resource Insects, Chinese Academy of Forestry, Bailongsi, Kunming 650224, PR China 8Landcare Research, Private Bag 92170, Auckland 1142, New Zealand 9BIOTEC Bioresources Technology Unit, National Center for Genetic Engineering and Biotechnology, NSTDA, 113 Thailand Science Park, Paholyothin Road, Khlong 1, Khlong Luang, Pathum Thani, 12120, Thailand 10Guizhou Academy of Agricultural Sciences, Guiyang, Guizhou 550006 PR China 11Hokuriku Research Center, National Agricultural Research Center, -
Generic Names in Magnaporthales Ning Zhang, Jing Luo, Amy Y
Generic names in Magnaporthales Ning Zhang, Jing Luo, Amy Y. Rossman, Takayuki Aoki, Izumi Chuma, Pedro W. Crous, Ralph Dean, Ronald P. de Vries, Nicole Donofrio, Kevin D. Hyde, et al. To cite this version: Ning Zhang, Jing Luo, Amy Y. Rossman, Takayuki Aoki, Izumi Chuma, et al.. Generic names in Magnaporthales. IMA Fungus, 2016, 7 (1), pp.155-159. 10.5598/imafungus.2016.07.01.09. hal- 01608608 HAL Id: hal-01608608 https://hal.archives-ouvertes.fr/hal-01608608 Submitted on 28 May 2020 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. Distributed under a Creative Commons Attribution - ShareAlike| 4.0 International License IMA FUNGUS · 7(1): 155–159 (2016) doi:10.5598/imafungus.2016.07.01.09 ARTICLE Generic names in Magnaporthales Ning Zhang1, Jing Luo1, Amy Y. Rossman2, Takayuki Aoki3, Izumi Chuma4, Pedro W. Crous5, Ralph Dean6, Ronald P. de Vries5,7, Nicole Donofrio8, Kevin D. Hyde9, Marc-Henri Lebrun10, Nicholas J. Talbot11, Didier Tharreau12, Yukio Tosa4, Barbara Valent13, Zonghua Wang14, and Jin-Rong Xu15 1Department of Plant Biology and Pathology, Rutgers University, New Brunswick, NJ 08901, USA; corresponding author e-mail: zhang@aesop. -
Notes on Currently Accepted Species of Colletotrichum
Mycosphere 7(8) 1192-1260(2016) www.mycosphere.org ISSN 2077 7019 Article Doi 10.5943/mycosphere/si/2c/9 Copyright © Guizhou Academy of Agricultural Sciences Notes on currently accepted species of Colletotrichum Jayawardena RS1,2, Hyde KD2,3, Damm U4, Cai L5, Liu M1, Li XH1, Zhang W1, Zhao WS6 and Yan JY1,* 1 Institute of Plant and Environment Protection, Beijing Academy of Agriculture and Forestry Sciences, Beijing 100097, People’s Republic of China 2 Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai 57100, Thailand 3 Key Laboratory for Plant Biodiversity and Biogeography of East Asia (KLPB), Kunming Institute of Botany, Chinese Academy of Science, Kunming 650201, Yunnan, China 4 Senckenberg Museum of Natural History Görlitz, PF 300 154, 02806 Görlitz, Germany 5State Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China 6Department of Plant Pathology, College of Plant Protection, China Agricultural University, Beijing 100193, China. Jayawardena RS, Hyde KD, Damm U, Cai L, Liu M, Li XH, Zhang W, Zhao WS, Yan JY 2016 – Notes on currently accepted species of Colletotrichum. Mycosphere 7(8) 1192–1260, Doi 10.5943/mycosphere/si/2c/9 Abstract Colletotrichum is an economically important plant pathogenic genus worldwide, but can also have endophytic or saprobic lifestyles. The genus has undergone numerous revisions in the past decades with the addition, typification and synonymy of many species. In this study, we provide an account of the 190 currently accepted species, one doubtful species and one excluded species that have molecular data. Species are listed alphabetically and annotated with their habit, host and geographic distribution, phylogenetic position, their sexual morphs and uses (if there are any known). -
Colletotrichum: Biological Control, Bio- Catalyst, Secondary Metabolites and Toxins
Mycosphere 7(8) 1164-1176(2016) www.mycosphere.org ISSN 2077 7019 Article Doi 10.5943/mycosphere/si/2c/7 Copyright © Guizhou Academy of Agricultural Sciences Mycosphere Essay 16: Colletotrichum: Biological control, bio- catalyst, secondary metabolites and toxins Jayawardena RS1,2, Li XH1, Liu M1, Zhang W1 and Yan JY1* 1 Institute of Plant and Environment Protection, Beijing Academy of Agriculture and Forestry Sciences, Beijing 100097, People’s Republic of China 2 Center of Excellence in Fungal Research and School of Science, Mae Fah Luang University, Chiang Rai 57100, Thailand Jayawardena RS, Li XH, Liu M, Zhang W, Yan JY 2016 – Mycosphere Essay 16: Colletotrichum: Biological control, bio-catalyst, secondary metabolites and toxins. Mycosphere 7(8) 1164–1176, Doi 10.5943/mycosphere/si/2c/7 Abstract The genus Colletotrichum has received considerable attention in the past decade because of its role as an important plant pathogen. The importance of Colletotrichum with regard to industrial application has however, received little attention from scientists over many years. The aim of the present paper is to explore the importance of Colletotrichum species as bio-control agents and as a bio-catalyst as well as secondary metabolites and toxin producers. Often the names assigned to the above four industrial applications have lacked an accurate taxonomic basis and this needs consideration. The current paper provides detailed background of the above topics. Key words – biotransformation – colletotrichin – mycoherbicide – mycoparasites – pathogenisis – phytopathogen Introduction Colletotrichum was introduced by Corda (1831), and is a coelomycete belonging to the family Glomerellaceae (Maharachchikumbura et al. 2015, 2016). Species of this genus are widely known as pathogens of economical crops worldwide (Cannon et al. -
Redalyc.Pyricularia Pennisetigena and P. Zingibericola from Invasive
Pesquisa Agropecuária Tropical ISSN: 1517-6398 [email protected] Escola de Agronomia e Engenharia de Alimentos Brasil de Assis Reges, Juliana Teodora; Negrisoli, Matheus Mereb; Dorigan, Adriano Francis; Castroagudín, Vanina Lilián; Nunes Maciel, João Leodato; Ceresini, Paulo Cezar Pyricularia pennisetigena and P. zingibericola from invasive grasses infect signal grass, barley and wheat Pesquisa Agropecuária Tropical, vol. 46, núm. 2, abril-junio, 2016, pp. 206-214 Escola de Agronomia e Engenharia de Alimentos Goiânia, Brasil Available in: http://www.redalyc.org/articulo.oa?id=253046235012 How to cite Complete issue Scientific Information System More information about this article Network of Scientific Journals from Latin America, the Caribbean, Spain and Portugal Journal's homepage in redalyc.org Non-profit academic project, developed under the open access initiative e-ISSN 1983-4063 - www.agro.ufg.br/pat - Pesq. Agropec. Trop., Goiânia, v. 46, n. 2, p. 206-214, Apr./Jun. 2016 Pyricularia pennisetigena and P. zingibericola from invasive grasses infect signal grass, barley and wheat1 Juliana Teodora de Assis Reges2, Matheus Mereb Negrisoli2, Adriano Francis Dorigan2, Vanina Lilián Castroagudín2, João Leodato Nunes Maciel3, Paulo Cezar Ceresini2 ABSTRACT RESUMO Pyricularia pennisetigena e P. zingibericola de Fungal species from the Pyricularia genus are gramíneas invasoras infectam braquiária, cevada e trigo associated with blast disease in plants from the Poaceae family, causing losses in economically important crops such Espécies de fungos do gênero Pyricularia estão associadas as rice, oat, rye, barley, wheat and triticale. This study aimed at com a doença brusone, em plantas da família Poaceae, causando characterizing the pathogenicity spectrum of P. pennisetigena perdas em culturas de importância econômica como arroz, aveia, and P. -
Fungal Planet Description Sheets: 400–468
Persoonia 36, 2016: 316– 458 www.ingentaconnect.com/content/nhn/pimj RESEARCH ARTICLE http://dx.doi.org/10.3767/003158516X692185 Fungal Planet description sheets: 400–468 P.W. Crous1,2, M.J. Wingfield3, D.M. Richardson4, J.J. Le Roux4, D. Strasberg5, J. Edwards6, F. Roets7, V. Hubka8, P.W.J. Taylor9, M. Heykoop10, M.P. Martín11, G. Moreno10, D.A. Sutton12, N.P. Wiederhold12, C.W. Barnes13, J.R. Carlavilla10, J. Gené14, A. Giraldo1,2, V. Guarnaccia1, J. Guarro14, M. Hernández-Restrepo1,2, M. Kolařík15, J.L. Manjón10, I.G. Pascoe6, E.S. Popov16, M. Sandoval-Denis14, J.H.C. Woudenberg1, K. Acharya17, A.V. Alexandrova18, P. Alvarado19, R.N. Barbosa20, I.G. Baseia21, R.A. Blanchette22, T. Boekhout3, T.I. Burgess23, J.F. Cano-Lira14, A. Čmoková8, R.A. Dimitrov24, M.Yu. Dyakov18, M. Dueñas11, A.K. Dutta17, F. Esteve- Raventós10, A.G. Fedosova16, J. Fournier25, P. Gamboa26, D.E. Gouliamova27, T. Grebenc28, M. Groenewald1, B. Hanse29, G.E.St.J. Hardy23, B.W. Held22, Ž. Jurjević30, T. Kaewgrajang31, K.P.D. Latha32, L. Lombard1, J.J. Luangsa-ard33, P. Lysková34, N. Mallátová35, P. Manimohan32, A.N. Miller36, M. Mirabolfathy37, O.V. Morozova16, M. Obodai38, N.T. Oliveira20, M.E. Ordóñez39, E.C. Otto22, S. Paloi17, S.W. Peterson40, C. Phosri41, J. Roux3, W.A. Salazar 39, A. Sánchez10, G.A. Sarria42, H.-D. Shin43, B.D.B. Silva21, G.A. Silva20, M.Th. Smith1, C.M. Souza-Motta44, A.M. Stchigel14, M.M. Stoilova-Disheva27, M.A. Sulzbacher 45, M.T. Telleria11, C. Toapanta46, J.M. Traba47, N. -
Resolving the Polyphyletic Nature of Pyricularia (Pyriculariaceae)
available online at www.studiesinmycology.org STUDIES IN MYCOLOGY ▪:1–36. Resolving the polyphyletic nature of Pyricularia (Pyriculariaceae) S. Klaubauf1,2, D. Tharreau3, E. Fournier4, J.Z. Groenewald1, P.W. Crous1,5,6*, R.P. de Vries1,2, and M.-H. Lebrun7* 1CBS-KNAW Fungal Biodiversity Centre, 3584 CT Utrecht, The Netherlands; 2Fungal Molecular Physiology, Utrecht University, Utrecht, The Netherlands; 3UMR BGPI, CIRAD, Campus International de Baillarguet, F-34398 Montpellier, France; 4UMR BGPI, INRA, Campus International de Baillarguet, F-34398 Montpellier, France; 5Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria 0002, South Africa; 6Wageningen University and Research Centre (WUR), Laboratory of Phytopathology, Droevendaalsesteeg 1, 6708 PB Wageningen, The Netherlands; 7UR1290 INRA BIOGER-CPP, Campus AgroParisTech, F-78850 Thiverval-Grignon, France *Correspondence: P.W. Crous, [email protected]; M.-H. Lebrun, [email protected] Abstract: Species of Pyricularia (magnaporthe-like sexual morphs) are responsible for major diseases on grasses. Pyricularia oryzae (sexual morph Magnaporthe oryzae) is responsible for the major disease of rice called rice blast disease, and foliar diseases of wheat and millet, while Pyricularia grisea (sexual morph Magnaporthe grisea) is responsible for foliar diseases of Digitaria. Magnaporthe salvinii, M. poae and M. rhizophila produce asexual spores that differ from those of Pyricularia sensu stricto that has pyriform, 2-septate conidia produced on conidiophores with sympodial proliferation. Magnaporthe salvinii was recently allocated to Nakataea, while M. poae and M. rhizophila were placed in Magnaporthiopsis. To clarify the taxonomic relationships among species that are magnaporthe- or pyricularia-like in morphology, we analysed phylogenetic relationships among isolates representing a wide range of host plants by using partial DNA sequences of multiple genes such as LSU, ITS, RPB1, actin and calmodulin. -
Morpho-Molecular Characterization and Epitypification of Annulatascus Velatisporus Article
Mycosphere 7 (9): 1389–1398 (2016) www.mycosphere.org ISSN 2077 7019 Article – special issue Doi 10.5943/mycosphere/7/9/12 Copyright © Guizhou Academy of Agricultural Sciences Morpho-molecular characterization and epitypification of Annulatascus velatisporus Dayarathne MC1,2,3,4, Maharachchikumbura SSN5, Phookamsak R1,2,3, Fryar SC6, To-anun C4, Jones EBG4, Al-Sadi AM5, Zelski SE7 and Hyde KD1,2,3* 1 Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai 57100, Thailand. 2 World Agro forestry Centre East and Central Asia Office, 132 Lanhei Road, Kunming 650201, China. 3 Key Laboratory for Plant Biodiversity and Biogeography of East Asia (KLPB), Kunming Institute of Botany, Chinese Academy of Science, Kunming 650201, Yunnan China. 4 Division of Plant Pathology, Department of Entomology and Plant Pathology, Faculty of Agriculture, Chiang Mai University, Chiang Mai 50200, Thailand. 5 Department of Crop Sciences, College of Agricultural and Marine Sciences, Sultan Qaboos University, PO Box 34, 123 Al Khoud, Oman. 6 Flinders University, School of Biology, GPO Box 2100, Adelaide SA 5001, Australia. 7 Department of Plant Biology, University of Illinois at Urbana-Champaign, Room 265 Morrill Hall, 505 South Goodwin Avenue, Urbana, IL 61801. Dayarathne MC, Maharachchikumbura SSN, Phookamsak R, Fryar SC, To-anun C, Jones EBG, Al- Sadi AM, Zelski SE, Hyde KD 2016 – Morpho-molecular characterization and epitypification of Annulatascus velatisporus. Mycosphere 7 (9), 1389–1398, Doi 10.5943/mycosphere/7/9/12 Abstract The holotype of Annulatascus velatisporus, the type species of the genus Annulatascus, which is the core species of Annulatascaceae (Annulatascales) is in poor condition as herbarium material has few ascomata and molecular data could not be generated. -
A PCR, Qpcr, and LAMP Toolkit for the Detection of the Wheat Blast Pathogen in Seeds
plants Article A PCR, qPCR, and LAMP Toolkit for the Detection of the Wheat Blast Pathogen in Seeds 1,2,3, 1, 2 2,3 Maud Thierry y, Axel Chatet y, Elisabeth Fournier , Didier Tharreau and Renaud Ioos 1,* 1 ANSES Plant Health Laboratory, Mycology Unit, Domaine de Pixérécourt, Bâtiment E, F-54220 Malzeville, France; [email protected] (M.T.); [email protected] (A.C.) 2 UMR BGPI, Montpellier University, INRAE, CIRAD, Montpellier SupAgro, 34398 Montpellier, France; [email protected] (E.F.); [email protected] (D.T.) 3 CIRAD, UMR BGPI, F-34398 Montpellier, France * Correspondence: [email protected] These authors contribute equally to this work. y Received: 7 February 2020; Accepted: 18 February 2020; Published: 21 February 2020 Abstract: Wheat blast is a devastating disease caused by the pathogenic fungus Pyricularia oryzae. Wheat blast first emerged in South America before more recently reaching Bangladesh. Even though the pathogen can spread locally by air-dispersed spores, long-distance spread is likely to occur via infected wheat seed or grain. Wheat blast epidemics are caused by a genetic lineage of the fungus, called the Triticum lineage, only differing from the other P. oryzae lineages by less than 1% genetic divergence. In order to prevent further spread of this pathogen to other wheat-growing areas in the world, sensitive and specific detection tools are needed to test for contamination of traded seed lots by the P. oryzae Triticum lineage. In this study, we adopted a comparative genomics approach to identify new loci specific to the P. oryzae Triticum lineage and used them to design a set of new markers that can be used in conventional polymerase chain reaction (PCR), real-time PCR, or loop-mediated isothermal amplification (LAMP) for the detection of the pathogen, with improved inclusivity and specificity compared to currently available tests. -
Musa Species (Bananas and Plantains) Authors: Scot C
August 2006 Species Profiles for Pacific Island Agroforestry ver. 2.2 www.traditionaltree.org Musa species (banana and plantain) Musaceae (banana family) aga‘ (ripe banana) (Chamorro), banana, dessert banana, plantain, cooking banana (English); chotda (Chamorro, Guam, Northern Marianas); fa‘i (Samoa); hopa (Tonga); leka, jaina (Fiji); mai‘a (Hawai‘i); maika, panama (New Zealand: Maori); meika, mei‘a (French Polynesia); siaine (introduced cultivars), hopa (native) (Tonga); sou (Solomon Islands); te banana (Kiribati); uchu (Chuuk); uht (Pohnpei); usr (Kosrae) Scot C. Nelson, Randy C. Ploetz, and Angela Kay Kepler IN BRIEF h C vit Distribution Native to the Indo-Malesian, E El Asian, and Australian tropics, banana and C. plantain are now found throughout the tropics and subtropics. photo: Size 2–9 m (6.6–30 ft) tall at maturity. Habitat Widely adapted, growing at eleva- tions of 0–920 m (0–3000 ft) or more, de- pending on latitude; mean annual tempera- tures of 26–30°C (79–86°F); annual rainfall of 2000 mm (80 in) or higher for commercial production. Vegetation Associated with a wide range of tropical lowland forest plants, as well as nu- merous cultivated tropical plants. Soils Grows in a wide range of soils, prefer- ably well drained. Growth rate Each stalk grows rapidly until flowering. Main agroforestry uses Crop shade, mulch, living fence. Main products Staple food, fodder, fiber. Yields Up to 40,000 kg of fruit per hectare (35,000 lb/ac) annually in commercial or- Banana and plantain are chards. traditionally found in Pacific Intercropping Traditionally grown in mixed island gardens such as here in Apia, Samoa, although seri- cropping systems throughout the Pacific. -
A Worldwide List of Endophytic Fungi with Notes on Ecology and Diversity
Mycosphere 10(1): 798–1079 (2019) www.mycosphere.org ISSN 2077 7019 Article Doi 10.5943/mycosphere/10/1/19 A worldwide list of endophytic fungi with notes on ecology and diversity Rashmi M, Kushveer JS and Sarma VV* Fungal Biotechnology Lab, Department of Biotechnology, School of Life Sciences, Pondicherry University, Kalapet, Pondicherry 605014, Puducherry, India Rashmi M, Kushveer JS, Sarma VV 2019 – A worldwide list of endophytic fungi with notes on ecology and diversity. Mycosphere 10(1), 798–1079, Doi 10.5943/mycosphere/10/1/19 Abstract Endophytic fungi are symptomless internal inhabits of plant tissues. They are implicated in the production of antibiotic and other compounds of therapeutic importance. Ecologically they provide several benefits to plants, including protection from plant pathogens. There have been numerous studies on the biodiversity and ecology of endophytic fungi. Some taxa dominate and occur frequently when compared to others due to adaptations or capabilities to produce different primary and secondary metabolites. It is therefore of interest to examine different fungal species and major taxonomic groups to which these fungi belong for bioactive compound production. In the present paper a list of endophytes based on the available literature is reported. More than 800 genera have been reported worldwide. Dominant genera are Alternaria, Aspergillus, Colletotrichum, Fusarium, Penicillium, and Phoma. Most endophyte studies have been on angiosperms followed by gymnosperms. Among the different substrates, leaf endophytes have been studied and analyzed in more detail when compared to other parts. Most investigations are from Asian countries such as China, India, European countries such as Germany, Spain and the UK in addition to major contributions from Brazil and the USA.