Sphagnum Centrale and S. Palustre from Mediterranean Basin: a Comparison with Conspecific North American Populations by Microsatellite Analysis
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<I>Sphagnum</I> Peat Mosses
ORIGINAL ARTICLE doi:10.1111/evo.12547 Evolution of niche preference in Sphagnum peat mosses Matthew G. Johnson,1,2,3 Gustaf Granath,4,5,6 Teemu Tahvanainen, 7 Remy Pouliot,8 Hans K. Stenøien,9 Line Rochefort,8 Hakan˚ Rydin,4 and A. Jonathan Shaw1 1Department of Biology, Duke University, Durham, North Carolina 27708 2Current Address: Chicago Botanic Garden, 1000 Lake Cook Road Glencoe, Illinois 60022 3E-mail: [email protected] 4Department of Plant Ecology and Evolution, Evolutionary Biology Centre, Uppsala University, Norbyvagen¨ 18D, SE-752 36, Uppsala, Sweden 5School of Geography and Earth Sciences, McMaster University, Hamilton, Ontario, Canada 6Department of Aquatic Sciences and Assessment, Swedish University of Agricultural Sciences, SE-750 07, Uppsala, Sweden 7Department of Biology, University of Eastern Finland, P.O. Box 111, 80101, Joensuu, Finland 8Department of Plant Sciences and Northern Research Center (CEN), Laval University Quebec, Canada 9Department of Natural History, Norwegian University of Science and Technology University Museum, Trondheim, Norway Received March 26, 2014 Accepted September 23, 2014 Peat mosses (Sphagnum)areecosystemengineers—speciesinborealpeatlandssimultaneouslycreateandinhabitnarrowhabitat preferences along two microhabitat gradients: an ionic gradient and a hydrological hummock–hollow gradient. In this article, we demonstrate the connections between microhabitat preference and phylogeny in Sphagnum.Usingadatasetof39speciesof Sphagnum,withan18-locusDNAalignmentandanecologicaldatasetencompassingthreelargepublishedstudies,wetested -
An All-Taxa Biodiversity Inventory of the Huron Mountain Club
AN ALL-TAXA BIODIVERSITY INVENTORY OF THE HURON MOUNTAIN CLUB Version: August 2016 Cite as: Woods, K.D. (Compiler). 2016. An all-taxa biodiversity inventory of the Huron Mountain Club. Version August 2016. Occasional papers of the Huron Mountain Wildlife Foundation, No. 5. [http://www.hmwf.org/species_list.php] Introduction and general compilation by: Kerry D. Woods Natural Sciences Bennington College Bennington VT 05201 Kingdom Fungi compiled by: Dana L. Richter School of Forest Resources and Environmental Science Michigan Technological University Houghton, MI 49931 DEDICATION This project is dedicated to Dr. William R. Manierre, who is responsible, directly and indirectly, for documenting a large proportion of the taxa listed here. Table of Contents INTRODUCTION 5 SOURCES 7 DOMAIN BACTERIA 11 KINGDOM MONERA 11 DOMAIN EUCARYA 13 KINGDOM EUGLENOZOA 13 KINGDOM RHODOPHYTA 13 KINGDOM DINOFLAGELLATA 14 KINGDOM XANTHOPHYTA 15 KINGDOM CHRYSOPHYTA 15 KINGDOM CHROMISTA 16 KINGDOM VIRIDAEPLANTAE 17 Phylum CHLOROPHYTA 18 Phylum BRYOPHYTA 20 Phylum MARCHANTIOPHYTA 27 Phylum ANTHOCEROTOPHYTA 29 Phylum LYCOPODIOPHYTA 30 Phylum EQUISETOPHYTA 31 Phylum POLYPODIOPHYTA 31 Phylum PINOPHYTA 32 Phylum MAGNOLIOPHYTA 32 Class Magnoliopsida 32 Class Liliopsida 44 KINGDOM FUNGI 50 Phylum DEUTEROMYCOTA 50 Phylum CHYTRIDIOMYCOTA 51 Phylum ZYGOMYCOTA 52 Phylum ASCOMYCOTA 52 Phylum BASIDIOMYCOTA 53 LICHENS 68 KINGDOM ANIMALIA 75 Phylum ANNELIDA 76 Phylum MOLLUSCA 77 Phylum ARTHROPODA 79 Class Insecta 80 Order Ephemeroptera 81 Order Odonata 83 Order Orthoptera 85 Order Coleoptera 88 Order Hymenoptera 96 Class Arachnida 110 Phylum CHORDATA 111 Class Actinopterygii 112 Class Amphibia 114 Class Reptilia 115 Class Aves 115 Class Mammalia 121 INTRODUCTION No complete species inventory exists for any area. -
A Comparison of PCR-Based Markers for the Molecular Identification of Sphagnum Species of the Section Acutifolia
Acta Societatis Botanicorum Poloniae Journal homepage: pbsociety.org.pl/journals/index.php/asbp ORIGINAL RESEARCH PAPER Received: 2010.05.18 Accepted: 2010.07.23 Published electronically: 2011.07.29 Acta Soc Bot Pol 80(3):185-192 DOI: 10.5586/asbp.2011.017 A comparison of PCR-based markers for the molecular identification of Sphagnum species of the section Acutifolia Jakub Sawicki*, Monika Szczecińska Department of Botany and Nature Protection, University of Warmia and Mazury in Olsztyn, Plac Łódzki 1, 10-727 Olsztyn, Poland Abstract RAPDs, ISJs, ISSRs, ITS and katGs were applied to determine genetic relationships between common Sphagnum species of the section Acutifolia. Twenty populations were genotyped using ten ISJ primers, 12 pairs of katG primers, 10 ISSR and 10 RAPD primers, and a restriction analysis of ITS1 and ITS2. ISSR and katG markers revealed the greatest number of species-specific bands. An analysis of ITS1 and ITS2 regions with restriction enzymes also proved to be a highly effective tool for species identification. Keywords: Sphagnum, genetic similarity, molecular markers RAPD, ISJ, katG, ITS, ISSR Introduction of the genus Sphagnum [10,11]. However, their practical appli- cation is difficult, as in order to obtain stable and distinct iso- Due to their great phenotypic plasticity, the classification enzymatic patterns, plants should be grown under glass-house of peat moss species often requires microscopic identification, conditions to normalize their expression levels and increase vi- which is both labor- and time-consuming. In addition to a tality [12]. Electrophoresis of enzymatic proteins cannot be ap- standard morphological description, the classification of bryo- plied to herbaceous materials, either, which makes it useless phytes increasingly often involves the use of molecular markers as a tool for verifying the correctness of species identification. -
Bryophytes Sl. : Mosses, Liverworts and Hornworts. Illustrated Glossary
A Lino et à Enzo 3 Bryophytes sl. Mosses, liverworts and hornworts Illustrated glossary (traduction française de chaque terme) Leica Chavoutier 2017 CHAVOUTIER, L., 2017 – Bryophytes sl. : Mosses, liverworts and hornworts. Illustrated glossary. Unpublished. 132 p.. Introduction In September 2016 the following book was deposed in free download CHAVOUTIER, L., 2016 – Bryophytes sl. : Mousses, hépatiques et antho- cérotes/Mosses, liverworts and hornworts. Glossaire illustré/Illustrated glossary. Inédit. 179 p. This new book is an English version of the previous one after being re- viewed and expanded. This glossary covers the mosses, liverworts and hornworts, three phyla that are related by some parts of their structures and especially by their life cycles. They are currently grouped to form bryophytes s.l. This glossary can only be partial: it was impossible to include in the defi- nitions all possible cases. The most common use has been privileged. Each term is associated with a theme to use, and it is in this context that the definition is given. The themes are: morphology, anatomy, support, habit, chorology, nomenclature, taxonomy, systematics, life strategies, abbreviations, ecosystems. Photographs : All photographs have been made by the author. Recommended reference CHAVOUTIER, L., 2017 – Bryophytes sl. : Mosses, liverworts and horn- worts. Illustrated glossary. Unpublished. 132 p. Any use of photos must show the name of the author: Leica Chavoutier Your comments, suggestions, remarks, criticisms, are to be adressed to : [email protected] Acknowledgements I am very grateful to Janice Glime for its invaluable contribution. This English version benefited from its review, its comments, its suggestions, and therefore improvements. I would also like to thank Jonathan Shaw. -
Peatlands on National Forests of the Northern Rocky Mountains: Ecology and Conservation
United States Department Peatlands on National Forests of of Agriculture Forest Service the Northern Rocky Mountains: Rocky Mountain Ecology and Conservation Research Station General Technical Report Steve W. Chadde RMRS-GTR-11 J. Stephen Shelly July 1998 Robert J. Bursik Robert K. Moseley Angela G. Evenden Maria Mantas Fred Rabe Bonnie Heidel The Authors Acknowledgments Steve W. Chadde is an Ecological Consultant in Calu- The authors thank a number of reviewers for sharing met, MI. At the time of this research project he was their expertise and comments in the preparation of this Ecologist with the USDA Forest Service’s Northern Region report. In Montana, support for the project was provided Natural Areas Program. by the Natural Areas Program of the Northern Region/ Rocky Mountain Research Station, U.S. Department of J. Stephen Shelly is a Regional Botanist with the USDA Agriculture, Forest Service. Dan Svoboda (Beaverhead- Forest Service’s Northern Region Headquarter’s Office Deerlodge National Forest) and Dean Sirucek (Flathead in Missoula, MT. National Forest) contributed portions of the soils and Robert J. Bursik is Botanical Consultant in Amery, WI. geology chapters. Louis Kuennen and Dan Leavell At the time of this research he was a Botanist with the (Kootenai National Forest) guided the authors to sev- Idaho Department of Fish and Game’s Conservation eral interesting peatlands. Mark Shapley, hydrologist, Data Center in Boise, ID. Helena, MT, volunteered his time and provided insights Robert K. Moseley is Plant Ecologist and Director for the into the hydrology and water chemistry of several rich Idaho Department of Fish and Game’s Conservation fens. -
And Sphagnum-Associated Microbial Communities
www.nature.com/scientificreports OPEN Environmental patterns of brown moss‑ and Sphagnum‑associated microbial communities Alexander Tøsdal Tveit1,6, Andrea Kiss2,6, Matthias Winkel2, Fabian Horn2, Tomáš Hájek3, Mette Marianne Svenning1, Dirk Wagner2,4 & Susanne Liebner2,5* Northern peatlands typically develop through succession from fens dominated by the moss family Amblystegiaceae to bogs dominated by the moss genus Sphagnum. How the diferent plants and abiotic environmental conditions provided in Amblystegiaceae and Sphagnum peat shape the respective moss associated microbial communities is unknown. Through a large‑scale molecular and biogeochemical study spanning Arctic, sub‑Arctic and temperate regions we assessed how the endo‑ and epiphytic microbial communities of natural northern peatland mosses relate to peatland type (Sphagnum and Amblystegiaceae), location, moss taxa and abiotic environmental variables. Microbial diversity and community structure were distinctly diferent between Amblystegiaceae and Sphagnum peatlands, and within each of these two peatland types moss taxon explained the largest part of microbial community variation. Sphagnum and Amblystegiaceae shared few (< 1% of all operational taxonomic units (OTUs)) but strikingly abundant (up to 65% of relative abundance) OTUs. This core community overlapped by one third with the Sphagnum‑specifc core‑community. Thus, the most abundant microorganisms in Sphagnum that are also found in all the Sphagnum plants studied, are the same OTUs as those few shared with Amblystegiaceae. Finally, we could confrm that these highly abundant OTUs were endophytes in Sphagnum, but epiphytes on Amblystegiaceae. We conclude that moss taxa and abiotic environmental variables associate with particular microbial communities. While moss taxon was the most infuential parameter, hydrology, pH and temperature also had signifcant efects on the microbial communities. -
Volume 1, Chapter 2-5: Bryophyta-Sphagnopsida
Glime, J. M. 2017. Bryophyta - Sphagnopsida. Chapt. 2-5. In: Glime, J. M. Bryophyte Ecology. Volume 1. Physiological Ecology. 2-5-1 Ebook sponsored by Michigan Technological University and the International Association of Bryologists. Last updated 18 June 2020 and available at <http://digitalcommons.mtu.edu/bryophyte-ecology/>. CHAPTER 2-5 BRYOPHYTA – SPHAGNOPSIDA TABLE OF CONTENTS Class Sphagnopsida – the peat mosses .......................................................................................................... 2-5-2 Sphagnaceae .......................................................................................................................................... 2-5-3 Flatbergiaceae...................................................................................................................................... 2-5-12 Ambuchananiaceae .............................................................................................................................. 2-5-12 Summary .................................................................................................................................................... 2-5-13 Acknowledgments ...................................................................................................................................... 2-5-13 Literature Cited .......................................................................................................................................... 2-5-13 2-5-2 Chapter 2-5: Bryophyta - Sphagnopsida CHAPTER 2-5 BRYOPHYTA - SPHAGNOPSIDA -
A Miniature World in Decline: European Red List of Mosses, Liverworts and Hornworts
A miniature world in decline European Red List of Mosses, Liverworts and Hornworts Nick Hodgetts, Marta Cálix, Eve Englefield, Nicholas Fettes, Mariana García Criado, Lea Patin, Ana Nieto, Ariel Bergamini, Irene Bisang, Elvira Baisheva, Patrizia Campisi, Annalena Cogoni, Tomas Hallingbäck, Nadya Konstantinova, Neil Lockhart, Marko Sabovljevic, Norbert Schnyder, Christian Schröck, Cecilia Sérgio, Manuela Sim Sim, Jan Vrba, Catarina C. Ferreira, Olga Afonina, Tom Blockeel, Hans Blom, Steffen Caspari, Rosalina Gabriel, César Garcia, Ricardo Garilleti, Juana González Mancebo, Irina Goldberg, Lars Hedenäs, David Holyoak, Vincent Hugonnot, Sanna Huttunen, Mikhail Ignatov, Elena Ignatova, Marta Infante, Riikka Juutinen, Thomas Kiebacher, Heribert Köckinger, Jan Kučera, Niklas Lönnell, Michael Lüth, Anabela Martins, Oleg Maslovsky, Beáta Papp, Ron Porley, Gordon Rothero, Lars Söderström, Sorin Ştefǎnuţ, Kimmo Syrjänen, Alain Untereiner, Jiri Váňa Ɨ, Alain Vanderpoorten, Kai Vellak, Michele Aleffi, Jeff Bates, Neil Bell, Monserrat Brugués, Nils Cronberg, Jo Denyer, Jeff Duckett, H.J. During, Johannes Enroth, Vladimir Fedosov, Kjell-Ivar Flatberg, Anna Ganeva, Piotr Gorski, Urban Gunnarsson, Kristian Hassel, Helena Hespanhol, Mark Hill, Rory Hodd, Kristofer Hylander, Nele Ingerpuu, Sanna Laaka-Lindberg, Francisco Lara, Vicente Mazimpaka, Anna Mežaka, Frank Müller, Jose David Orgaz, Jairo Patiño, Sharon Pilkington, Felisa Puche, Rosa M. Ros, Fred Rumsey, J.G. Segarra-Moragues, Ana Seneca, Adam Stebel, Risto Virtanen, Henrik Weibull, Jo Wilbraham and Jan Żarnowiec About IUCN Created in 1948, IUCN has evolved into the world’s largest and most diverse environmental network. It harnesses the experience, resources and reach of its more than 1,300 Member organisations and the input of over 10,000 experts. IUCN is the global authority on the status of the natural world and the measures needed to safeguard it. -
Macroscopic Identification Key of 36 Species in Eastern Canada Sphagnum
1842 GEOLOGICAL SURVEY OF CANADA MISCELLANEOUS REPORT 61 MACROSCOPIC IDENTIFICATION KEY OF 36SPHAGNUM SPECIES IN EASTERN CANADA D-F. Bastien and M. Garneau 1997 Natural Resources Ressources naturelles Canada Canada GEOLOGICAL SURVEY OF CANADA MISCELLANEOUS REPORT 61 MACROSCOPIC IDENTIFICATION KEY OF 36 SPHAGNUM SPECIES IN EASTERN CANADA Denis-F. Bastien Michelle Garneau 1997 ©Her Majesty the Queen in Right of Canada, 1997 Catalogue No. M41-8/61E ISBN 0-660-16988-6 Available in Canada from Geological Survey of Canada offices: 601 Booth Street Ottawa, Ontario K1A 0E8 3303-33rd Street N.W., Calgary, Alberta T2L 2A7 or from Canadian Government Publishing Public Works and Government Services Canada Ottawa, Ontario K1A 0S9 A deposit coy of this publication is also available for reference in selected public libraries across Canada Cette publication est aussi disponible en français Price subject to change without notice Cover illustration Sphagnum species: Sphagnum russowii Critical reviewers Pierre Buteau Norman Dignard Dennis Gignac Pierre Grondin Inez M. Kettles Authors’ addresses Michelle Garneau Denis-F. Bastien GSC, Quebec 605 Maurice-Sébastien Quebec Geoscience Centre Village Huron, Quebec Institut national de la recherche scientifique G0A 4V0 2535 Laurier Boulevard P.O. Box 7500, Sainte-Foy, Quebec G1V 4C7 Original manuscript submitted: 1996-06 Final version approved for publication: 1996-07 Preface It is not always easy to identify mosses, even with the help of a microscope and identification keys. While certain species can be identified directly in the field, others can easily be misidentified, despite the aid of precision instruments, because of the large number of shared characteristics. In addition, the task is often made more difficult since many specialists disagree about taxonomic criteria. -
Axenic In-Vitro Cultivation of Nineteen Peat-Moss (Sphagnum L.) Species As a Resource for Basic 2 Biology, Biotechnology and Paludiculture 3 Melanie A
bioRxiv preprint doi: https://doi.org/10.1101/2020.03.25.004770; this version posted March 25, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. 1 Axenic in-vitro cultivation of nineteen peat-moss (Sphagnum L.) species as a resource for basic 2 biology, biotechnology and paludiculture 3 Melanie A. Heck1, Volker M. Lüth1, Matthias Krebs2,3, Mira Kohl2,3, Anja Prager2,3, Hans Joosten2,3, Eva 4 L. Decker1 and Ralf Reski1,4,5 5 6 1Plant Biotechnology, Faculty of Biology, University of Freiburg, Freiburg, Germany; 2Peatland Studies 7 and Palaeoecology, Institute of Botany and Landscape Ecology, University of Greifswald, Greifswald, 8 Germany; 3Greifswald Mire Centre, Greifswald, Germany; 4CIBSS – Centre for Integrative Biological 9 Signalling Studies, University of Freiburg, Freiburg, Germany; 5Cluster of Excellence livMatS @ FIT – 10 Freiburg Center for Interactive Materials and Bioinspired Technologies, University of Freiburg, 11 Freiburg, Germany 12 13 ORCID IDs: 14 0000-0002-0817-5679 (MAH) 15 0000-0002-2923-4236 (VML) 16 0000-0001-6336-327X (MaK) 17 0000-0002-5381-1961 (MiK) 18 0000-0002-1750-0592 (AP) 19 0000-0001-8694-5811 (HJ) 20 0000-0002-9151-1361 (ELD) 21 0000-0002-5496-6711 (RR) 22 23 Author for correspondence: 24 Ralf Reski 25 Phone: +49 761 2036969 26 Email: [email protected] 1 bioRxiv preprint doi: https://doi.org/10.1101/2020.03.25.004770; this version posted March 25, 2020. -
Evolution of Niche Preference in <I>Sphagnum</I> Peat Mosses
ORIGINAL ARTICLE doi:10.1111/evo.12547 Evolution of niche preference in Sphagnum peat mosses Matthew G. Johnson,1,2,3 Gustaf Granath,4,5,6 Teemu Tahvanainen,7 Remy Pouliot,8 Hans K. Stenøien,9 Line Rochefort,8 Hakan˚ Rydin,4 and A. Jonathan Shaw1 1Department of Biology, Duke University, Durham, North Carolina 27708 2Current Address: Chicago Botanic Garden, 1000 Lake Cook Road Glencoe, Illinois 60022 3E-mail: [email protected] 4Department of Plant Ecology and Evolution, Evolutionary Biology Centre, Uppsala University, Norbyvagen¨ 18D, SE-752 36, Uppsala, Sweden 5School of Geography and Earth Sciences, McMaster University, Hamilton, Ontario, Canada 6Department of Aquatic Sciences and Assessment, Swedish University of Agricultural Sciences, SE-750 07, Uppsala, Sweden 7Department of Biology, University of Eastern Finland, P.O. Box 111, 80101, Joensuu, Finland 8Department of Plant Sciences and Northern Research Center (CEN), Laval University Quebec, Canada 9Department of Natural History, Norwegian University of Science and Technology University Museum, Trondheim, Norway Received March 26, 2014 Accepted September 23, 2014 Peat mosses (Sphagnum) are ecosystem engineers—species in boreal peatlands simultaneously create and inhabit narrow habitat preferences along two microhabitat gradients: an ionic gradient and a hydrological hummock–hollow gradient. In this article, we demonstrate the connections between microhabitat preference and phylogeny in Sphagnum. Using a dataset of 39 species of Sphagnum, with an 18-locus DNA alignment and an ecological dataset encompassing three large published studies, we tested for phylogenetic signal and within-genus changes in evolutionary rate of eight niche descriptors and two multivariate niche gradients. We find little to no evidence for phylogenetic signal in most component descriptors of the ionic gradient, but interspecific variation along the hummock–hollow gradient shows considerable phylogenetic signal. -
Institute of Terrestrial Ecology Handbook of European Sphagna
I : I I • • ' •:.. .P)••• •.. • - • • • 4. .. 1- t • It_ 111 0 • . •. • • •e• • . , • • • ERRATUM Plate 3. Caption should read "S. palustre var. centrale (Dierssen)" Figure 83. Caption should read "Sphagnum compactum" Figure 85. Caption should read "Sphagnum strictum" Handbook of European Sphagna - - Natural Environment Research Council Institute of Terrestrial Ecology Handbook of European Sphagna R E Daniels A Eddy Institute of Terrestrial Ecology British Museum (Natural History) Furzebrook Research Station Cromwell Road Wareham London Dorset Pdnted in Great Bdtain by Cambrian News (Aberystwyth) Ltd NERC Copyright 1985 Published in 1985 by Institute of Terrestrial Ecology Administrative Headquarters Monks Wood Experimental Station Abbots Ripton Huntingdon PE17 2LS British Library Cataloguing-in-Publication Data Handbook of European Sphagna. 1. Peat mosses--Europe I. Daniels. R. E. II. Eddy, A. Ill Institute of-Terrestrial Ecology 588'.1'094 0K539.S75 ISBN 0-904282-82-1 The Institute of Terrestrial Ecology (ITE) was established in 1973, from the former Nature Conservancy's research stations and staff, joined later by the Institute of Tree Biology and the Culture Centre of Algae and Protozoa. ITE contributes to, and draws upon, the collective knowledge of the 13 sister institutes which make up the Natural Environment Research Council, spanning all the environmental sciences. The Institute studies the factors determining the structure, composition ancIL processes of land and freshwater systems, and of individual plant and animal species. It is developing a sounder scientific basis for predicting and modelling environmental trends arising from natural or man-made change. The resul6 of this research are available to those responsible for the protection, management and wise use of our natural resources.